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2024-04-29 04:08:26

Gene list

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COG category: Signal transduction mechanisms
Organism: Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343

Number of genes found: 181

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Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BF0276 putative two-component system sensor histidine kinase/response regulator fusion proteinchromosome CDS306379 3990 + 0.449373
NA BF2843 putative anti-anti sigma factorchromosome CDS3305079 306 - 0.401961
NA BF2242 putative two component system sensor histidine kinasechromosome CDS2619884 1338 + 0.466368
NA BF3660 putative membrane proteinchromosome CDS4320558 1086 + 0.434622
NA BF2252 putative two component system response regulatorchromosome CDS2630694 696 - 0.449713
NA BF4171 conserved hypothetical proteinchromosome CDS4917622 2844 - 0.501758
NA BF0841 putative phosphate starvation-inducible PhoH-like proteinchromosome CDS1034451 1014 - 0.42998
NA BF3196 putative two-component system, response regulatorchromosome CDS3751301 738 - 0.449865
NA BF0164 putative two-component system, response regulator proteinchromosome CDS175859 678 - 0.348083
NA BF3089 putative two-component system histidine kinase/response regulator fusion proteinchromosome CDS3598557 2925 + 0.49641
NA BF3855 putative regulatory proteinchromosome CDS4543520 564 - 0.33156
NA BF1275 putative cNMP and DNA binding protein, possible regulatorchromosome CDS1529541 570 - 0.350877
NA BF1970 possible anti-sigma factorchromosome CDS2300179 879 + 0.356086
NA BF1590 putative two-component response regulatorchromosome CDS1849519 690 - 0.476812
NA BF1513 putative anti-sigma factorchromosome CDS1774999 957 - 0.416928
NA BF3155 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS3690596 3993 + 0.428249
NA BF0782 putative two-component system sensor histidine kinasechromosome CDS959599 2760 + 0.476449
NA BF2368 putative regulatory proteinchromosome CDS2765441 381 + 0.440945
NA BF2253 putative two component system sensor histidine kinasechromosome CDS2631386 1467 - 0.446489
NA BF0998 putative sigma-54 dependent transcriptional regulatorchromosome CDS1250304 1227 + 0.475143
NA BF2449 putative two component system histidine kinasechromosome CDS2839030 1278 - 0.497653
NA BF1872 putative two-component histidine sensor kinasechromosome CDS2185269 1914 + 0.492685
NA BF3174 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS3718525 2724 - 0.508443
NA BF3164 putative two-component regulator sensor kinasechromosome CDS3704567 2271 + 0.457948
NA BF2842 putative anti sigma factorchromosome CDS3304636 429 - 0.417249
NA BF2754 putative two component system histidine kinasechromosome CDS3211194 1299 + 0.472671
NA BF2241 putative two component system response regulatorchromosome CDS2619192 675 + 0.46963
NA BF3725 putative membrane proteinchromosome CDS4395649 933 - 0.410504
NA BF2207 putative two-component system, response regulatorchromosome CDS2575917 1341 - 0.435496
NA BF1413 putative anti-sigma factorchromosome CDS1678667 936 + 0.339744
NA BF3509 putative response regulatorchromosome CDS4132776 399 - 0.41604
NA BF1447 putative two-component system sensor histidine kinasechromosome CDS1713939 2613 + 0.457711
NA BF0231 putative regulatory proteinchromosome CDS254040 1149 - 0.392515
NA BF2789 conserved hypothetical proteinchromosome CDS3246943 2376 - 0.546296
NA BF2686 putative DNA-binding response regulatorchromosome CDS3128110 609 - 0.441708
NA BF0242 putative two-component system sensor kinasechromosome CDS266842 1095 + 0.432877
NA BF3745 putative membrane proteinchromosome CDS4418053 969 + 0.406605
NA BF1281 putative two-component sensor histidine kinasechromosome CDS1534709 2379 + 0.379571
NA BF0823 putative transmembrane proteinchromosome CDS1015679 2043 + 0.419971
NA BF4270 putative anti-sigma factorchromosome CDS5071011 921 - 0.391965
NA BF1878 putative DNA-binding cyclic-nucleotide binding proteinchromosome CDS2193383 582 - 0.45189
NA BF4102 putative two-component sensor histidine kinase transcriptional regulatorchromosome CDS4830901 561 + 0.44385
NA BF0902 putative transmembrane and transcriptional regulatory proteinchromosome CDS1130439 843 + 0.47331
NA BF0502 putative anti-sigma factorchromosome CDS584837 930 - 0.429032
NA BF2682 putative response regulatorchromosome CDS3124428 366 + 0.371585
NA BF2532 putative two-component system sensor histidine kinasechromosome CDS2946829 2439 - 0.479295
NA BF2836 putative membrane proteinchromosome CDS3293642 894 - 0.39821
NA BF4103 putative two-component response regulator autolysis regulator LytRchromosome CDS4831461 765 + 0.405229
NA BF3435 conserved hypothetical proteinchromosome CDS4051813 2970 - 0.451515
NA BF4131 putative anti-sigma factorchromosome CDS4859762 933 + 0.40836
NA BF3054 putative two-component system sensor histidine kinasechromosome CDS3552606 1956 + 0.467791
NA BF3098 putative anti-sigma factorchromosome CDS3616393 999 - 0.421421
NA BF1309 putative anti-sigma factorchromosome CDS1568804 1023 + 0.426197
NA BF4048 putative two-component system sensor histidine kinase/response regulator fusion proteinchromosome CDS4755430 3924 - 0.364934
NA BF2205 putative regulatory proteinchromosome CDS2573826 666 - 0.438438
NA BF0205 putative transmembrane proteinchromosome CDS223192 1056 + 0.357955
NA BF1139 putative two-component system sensor histidine kinase/response regulator fusion proteinchromosome CDS1398685 1914 + 0.411703
NA BF4286 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS5088415 3990 - 0.402256
NA BF2840 putative two-component system, histidine kinasechromosome CDS3300204 2838 - 0.433404
NA BF2206 putative two-component system, sensor kinasechromosome CDS2574607 1314 - 0.417808
NA BF4326 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS5142098 2754 - 0.438998
NA BF4110 putative transcriptional regulator GerE, LuxR familychromosome CDS4839348 837 + 0.391876
NA BF2551 putative lipoproteinchromosome CDS2975461 417 + 0.465228
NA BF4262 putative two-component sensor histidine kinase with PAS domainchromosome CDS5057058 1569 - 0.427661
NA BF0870 putative anti-sigma factorchromosome CDS1086324 987 + 0.39615
NA BF4076 hypothetical protein; conserved hypothetical proteinchromosome CDS4798677 1029 - 0.434402
NA BF1203 putative anti-sigma factorchromosome CDS1462873 930 + 0.419355
NA BF0569 putative anti-sigma factorchromosome CDS676445 999 + 0.446446
NA BF1451 putative two component sensor histidine kinase proteinchromosome CDS1720021 1293 + 0.470224
NA BF3411 putative regulatory proteinchromosome CDS4022940 990 + 0.462626
NA BF3767 conserved hypothetical membrane proteinchromosome CDS4449072 1734 + 0.461361
NA BF1220 conserved hypothetical proteinchromosome CDS1484335 543 + 0.430939
NA BF2753 putative two component system response regulatorchromosome CDS3210499 678 + 0.471976
NA BF2095 putative two-component response regulator transcriptional regulatory proteinchromosome CDS2450151 1398 - 0.505007
NA BF1605 putative two-component system sensor histidine kinase proteinchromosome CDS1866619 1251 - 0.507594
NA BF0692 putative RelA/SpoT GTP pyrophosphokinasechromosome CDS847547 2244 - 0.456774
NA BF3364 putative two-component system, sensor kinasechromosome CDS3968664 789 - 0.496831
NA BF0821 conserved hypothetical transmembrane proteinchromosome CDS1013875 1563 + 0.435061
NA BF0527 putative two-component response regulator-like proteinchromosome CDS618260 1344 + 0.463542
NA BF0168 putative two-component response regulator transcriptional regulatory proteinchromosome CDS180086 687 + 0.464338
NA BF4113 putative AraC-family transcriptional regulatorchromosome CDS4841827 897 + 0.386845
NA BF2344 conserved putative DNA-binding hypothetical proteinchromosome CDS2738201 582 + 0.371134
NA BF2943 conserved hypothetical proteinchromosome CDS3420035 678 - 0.342183
NA BF3076 putative membrane proteinchromosome CDS3579023 900 - 0.432222
NA BF2173 putative two-component regulatory system histidine kinasechromosome CDS2528984 1536 - 0.421224
NA BF3850 putative regulatory proteinchromosome CDS4536288 1287 - 0.366744
NA BF0313 putative cAMP-binding DNA-binding proteinchromosome CDS364839 564 - 0.437943
NA BF4032 putative low molecular weight protein-tyrosine-phosphatasechromosome CDS4736337 474 - 0.5
NA BF3162 putative carbon starvation-related membrane proteinchromosome CDS3701268 1428 - 0.495098
NA BF2047 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS2393187 2700 - 0.506667
NA BF3208 putative two-component system, sensor kinasechromosome CDS3771774 1632 - 0.471201
NA BF2729 putative membrane proteinchromosome CDS3177185 1989 - 0.487179
NA BF3005 putative membrane proteinchromosome CDS3494393 1107 + 0.312556
NA BF2094 putative two-component sensor histidine kinase proteinchromosome CDS2448812 1320 - 0.506061
NA BF1606 putative two-component response regulator transcriptional regulatory proteinchromosome CDS1867875 1338 - 0.51719
NA BF2250 putative exported proteinchromosome CDS2629296 534 - 0.468165
NA BF0976 putative anti-sigma factorchromosome CDS1221185 1008 + 0.429563
NA BF2844 putative regulatory proteinchromosome CDS3305403 1170 - 0.446154
NA BF3197 putative two component system, sensor proteinchromosome CDS3752035 1170 - 0.447009
NA BF3925 putative two-component system sensor histidine kinase/response regulator fusion proteinchromosome CDS4629717 2301 - 0.478053
NA BF4312 putative two-component response regulatorchromosome CDS5117443 774 - 0.445736
NA BF3582 putative regulatory protein (possible anti-sigma factor)chromosome CDS4225765 1221 - 0.396396
NA BF4150 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS4883986 1674 - 0.437276
NA BF0030 putative AraC family/two component family regulatory proteinchromosome CDS38442 1740 - 0.386207
NA BF2190 putative two component system histidine kinase/response regulator fusion proteinchromosome CDS2545403 1128 + 0.397163
NA BF3750 putative membrane proteinchromosome CDS4426841 2193 - 0.422709
NA BF0486 putative two-component histidine sensor kinasechromosome CDS562485 1236 + 0.397249
NA BF4153 putative two-component regulator sensor histidine kinase transcriptional regulatorchromosome CDS4889725 1554 + 0.449807
NA BF2954 conserved hypothetical proteinchromosome CDS3435789 783 + 0.418902
NA BF3292 conserved hypothetical proteinchromosome CDS3877204 624 - 0.307692
NA BF3661 putative response regulatorchromosome CDS4321640 780 + 0.448718
NA BF3053 putative two-component system sensor histidine kinasechromosome CDS3550759 1851 + 0.462993
NA BF2959 conserved hypothetical proteinchromosome CDS3441006 216 + 0.416667
NA BF2450 putative two component system response regulatorchromosome CDS2840304 1365 - 0.488645
NA BF0949 conserved hypothetical protein, possible C-terminal metal binding sitechromosome CDS1184760 636 - 0.422956
NA BF4313 putative two-component system sensor, no kinase domainchromosome CDS5118209 1026 - 0.407407
NA BF3929 putative two-component response regulator transcriptional regulatory proteinchromosome CDS4635528 1344 + 0.448661
NA BF0034 hypothetical proteinchromosome CDS43795 162 + 0.320988
NA BF1931 putative two-component system response regulatorchromosome CDS2251993 699 - 0.470672
NA BF0135 conserved hypothetical proteinchromosome CDS142059 1056 - 0.460227
NA BF2908 putative membrane proteinchromosome CDS3379633 1026 - 0.38499
NA BF1176 hypothetical proteinchromosome CDS1432829 684 - 0.334795
NA BF0031 hypothetical transmembrane proteinchromosome CDS41125 1236 + 0.338997
NA BF1344 putative transcriptional regulatory proteinchromosome CDS1605693 678 - 0.430678
NA BF2921 putative arsenate reductasechromosome CDS3390041 474 + 0.474684
NA BF3755 putative membrane proteinchromosome CDS4435143 942 - 0.433121
NA BF0967 putative two-component sensor histidine kinasechromosome CDS1208696 1902 + 0.462671
NA BF2839 putative two-component system, histidine kinasechromosome CDS3299345 843 - 0.42586
NA BF1489 putative conserved TraI-like protein found in conjugate transposonchromosome CDS1752281 522 + 0.519157
NA BF1929 putative UmuD/RumA DNA repair proteinchromosome CDS2249949 438 - 0.429224
NA BF0954 putative FNR-family transcriptional regulator proteinchromosome CDS1192309 702 - 0.423077
NA BF1963 possible anti-sigma factorchromosome CDS2294215 849 - 0.467609
NA BF2282 putative two component system response regulatorchromosome CDS2674949 729 + 0.414266
NA BF1589 putative two-component histidine kinase sensor proteinchromosome CDS1847598 1833 - 0.482815
NA BF2849 conserved hypothetical PhoH-like proteinchromosome CDS3310586 1326 - 0.446456
NA BF2255 putative sensor histidine kinasechromosome CDS2635266 2010 - 0.376119
NA BF0552 putative LuxR family transcriptional regulatorchromosome CDS658180 600 - 0.528333
NA BF4179 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS4935903 4029 + 0.397865
NA BF0395 putative two-component system sensor histidine kinasechromosome CDS483767 2016 - 0.428075
NA BF2629 conserved hypothetical proteinchromosome CDS3059863 1080 - 0.469444
NA BF0165 putative two-component regulatory system, sensor kinase proteinchromosome CDS176546 1353 - 0.331116
NA BF0365 putative FNR-family transcriptional regulatory proteinchromosome CDS441547 687 + 0.426492
NA BF0584 conserved hypothetical proteinchromosome CDS700225 765 + 0.445752
NA BF1874 putative GAF-domain signal transduction proteinchromosome CDS2189045 474 + 0.487342
NA BF0916 putative FNR-like proteinchromosome CDS1146588 684 - 0.407895
NA BF1387 putative transmembrane AraC family transcriptional regulatorchromosome CDS1653695 1818 + 0.429043
NA BF3597 conserved hypothetical proteinchromosome CDS4245158 570 + 0.454386
NA BF2723 putative two-component system histidne kinase/reponse regulator fusion proteinchromosome CDS3167918 3048 + 0.457677
NA BF0914 putative anti-sigma factorchromosome CDS1144843 1107 + 0.416441
NA BF0183 conserved hypothetical proteinchromosome CDS199179 714 + 0.407563
NA BF0335 putative two-component system sensor histidine kinasechromosome CDS401513 1650 + 0.376364
NA BF3901 putative LuxR-family regulatory proteinchromosome CDS4591426 648 - 0.435185
NA BF0169 putative two-component regulator sensor kinasechromosome CDS180769 1368 + 0.453216
NA BF0470 hypothetical proteinchromosome CDS546522 1143 + 0.306212
NA BF0401 putative transmembrane proteinchromosome CDS488434 1071 + 0.364146
NA BF0040 hypothetical transmembrane proteinchromosome CDS46514 1140 + 0.353509
NA BF2647 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS3078898 3069 - 0.423591
NA BF2174 putative AraC-family transcriptional regulatorchromosome CDS2530794 873 + 0.408935
NA BF2281 putative two component system sensor histidine kinasechromosome CDS2670430 4491 + 0.409708
NA BF0684 putative anti-sigma factorchromosome CDS836618 999 - 0.447447
NA BF0101 putative two-component response regulatorchromosome CDS106878 756 + 0.399471
NA BF3301 putative two-component system sensor kinase/response regulator fusion proteinchromosome CDS3886836 4059 - 0.381621
NA BF0668 putative histidine kinasechromosome CDS810853 1170 + 0.433333
NA BF3641 putative transmembrane sensor/regulatory proteinchromosome CDS4297084 879 + 0.467577
NA BF1651 putative solute-binding protein precursorchromosome CDS1925239 825 - 0.486061
NA BF1829 putative transmembrane proteinchromosome CDS2136629 870 - 0.406897
NA BF3573 putative anti sigma factorchromosome CDS4210518 1026 - 0.401559
NA BF0808 putative two-component system sensor histidine kinase/response regulator fusion proteinchromosome CDS992927 4086 + 0.38326
NA BF0970 putative anti-sigma factorchromosome CDS1211887 1026 + 0.45809
NA BF1932 putative transmembrane proteinchromosome CDS2252694 1053 - 0.477683
NA BF2495 conserved hypothetical proteinchromosome CDS2903453 1122 - 0.361854
NA BF0336 putative two-component sensor histidine kinasechromosome CDS403256 2439 - 0.420254
frrD BF0533 putative two-component sensor histidine kinasechromosome CDS626418 1440 + 0.417361
frrF BF0535 putative anti-sigma factorchromosome CDS628631 1011 + 0.386746
kdpD BF0532 putative osmosensitive potassium transport sensor proteinchromosome CDS625262 1128 + 0.446809
relA BF2223 GTP pyrophosphokinasechromosome CDS2596375 2214 - 0.439928
rprX BF3635 two-component regulatory system, sensor kinase proteinchromosome CDS4289852 1560 - 0.426923
rprY BF3634 two-component system, transcriptional regulatory proteinchromosome CDS4289149 711 - 0.417722
rteA BF1529 putative two component system sensor kinasechromosome CDS1789931 1272 + 0.446541
rteB BF1530 putative two-component system response regulatorchromosome CDS1791195 1323 + 0.562358
typA BF4258 putative GTP-binding elongation factor family protein TypA/BipAchromosome CDS5052358 1800 - 0.449444