Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Colwellia psychrerythraea 34H, 34H; BAA-681

>CPS_3042 methyl-accepting chemotaxis protein
MNNKVIKPIFIATIIVGIISLISFISQQIFNSIIITTAASGAAVFISVAS
LTHKLATSTTLLNLSYINANEEHSNLANVGEKIGSKASELAINSAEVSFF
LEQLSSAIVKSSEDVDRLATAAEQMSVNSKQINDNAAIASEQSNQAMLAS
SSSHQQLTTNIKIVNQLSMAVNNASVKIQFLEKKALEIQSITDVIDAISS
QTNLLALNAAIEAARAGEHGRGFAVVADEVRSLAAKTADATSQIGDMLKQ
MGDETSETTAVMLEIVQQTNSVVTTMTDLSLSFEQIDQLMSDSSGASDQI
SHALQEQDLAAAEISTSVVNLHDFLIDKSKETQQVSIQASSLSTSTESIF
VQLSVFDSKTLITSMCNQAQLAADKVGKLFEKSIIDKSITMQQLFDFNYQ
TIGNTEPAKFSTSFDSFTDRVLPRIQDPLLQEFNDMIYAGAVDINGYFPT
HNKCFSKPLTGNPTLDVANNRTKRMFNDATGIRCAKNIDSFLLQTYKRDT
GEIMHDVSAPIFIQGKHWGGFRIGFKA
>CPS_2662 EAL domain protein
MTITSVASVAKTALSLLTLEEIKGSTHQVEKGVLSTFENITLTSHFQPIY
SIDHQKIIGYEALIRGKDNDGNNITPDVIFDTPCDERSSVYLDRLCRYTH
VANSQKLEDQDKWLFINVSSLACEKGRNYGTFFSDLLSYFNIPAERVVVE
IIEDHCNNNAQLLETCNYYKSMGCLIAIDDFGAGHSNFERIWNLRPDIVK
LDRSILLRAIKSNHTQKMLTSIVQILHQSGCLVVIEGIETEEQALIAIDS
NADFVQGFYFSRPQAASYIQTETKPLFAHLVKQNIAIEQYQLHQDLHWSS
TYRKTFLQAVMTIKTGEIINSVIKPLMNLKKVIRCFLVDNQGQQLGESYI
VDQGKLNPAGQFYQLQLGKDANWYRKHYIRNALRQPNQMHISPPYQSITG
DGLCITTSMCFDTDEGQKILCMDILAGH
>CPS_2785 sensor histidine kinase
MSIRRFLVLTLVAVLTLITFIAAIQGYKASMTRAEKLFEQQLVDFAQIVK
GLHQTFDTKQRQFVTIKQQTSFAFQVWQGDTLVIQSANSPVKPIMSLNKS
PTHFGEVNFAGQRWRTIYLASSPDHSSDYFTSNGPDNALEANDNELVIIV
AQPLKKQFLLAQEVILAAVTPMIIAIVLLSFLIYGIITQGLKPLHKLTTA
LANKRSNDFTPLALHVDNSELSRVVITLNDLLGRLNLAFERERHFAADAA
HELKTPLSVLKINVHNLSQELNEQGQQYPINLIKPLKVSVERMGHVIDQI
LHLNRTNPDQINQSQQQVKLKTLLQAVIGDLYQNIANKQQTITLSSDELT
FKGDEISLQLMLTNLISNANKYTPQQGEIKVSTKYIQNDNHQRKSQNKIA
IIIEDSGEGIPADEYHRVFDRFYRVGGDQHDSSVLGCGLGLTIVKHIVDM
HRGKITLSQSKLLGGLRVEVLFDHVLEQKLEKNLEQSLAQKESQANAVVR
CAGQLDNKDERS
>CPS_0139 methyl-accepting chemotaxis protein
MRVSSFSRLSVTAISIFTAIFMATMYHVGESLSESRAQYKGYQALISLTT
VEFNRTIVEYLQTGDAALLNKAQKQLTGIVKKTYSLNIDKLSKQIDSQAQ
ALANNIDTKFRAMGKLSGDPLVLLRNGEQEMIALNNDLSNHVQNTQVLSV
KEQFNYLVTIQTIGKLLADLVSAREAIFTQAQPNIQSVNPLLKELKGLGS
FLSLQKALAIYEESDDDLFDDSENLLGDDEEKQDLSLEAINELQSLFNRY
QRELENTLAQQQQRKMGFALLAKQVGNIEKAIMQGEAEISQQQEKINEQL
YIIVIGLLIFLVVFLLANYWLQRSVILQPLRNLRDSFVQLVEQGKVDNII
NIDNRTEFGEISTSFNHMVNKLAQDDKDKAQQLDLVAKALTTMESQVKSI
YQSSHTTSEHVQGARKIMEALGEATETVNTLSGQVVNNAQATKQAMEVSQ
HHVSQVLAASESTNLAAKESKGAITSLFHSVESVTSIVDVISAIADQTNL
LALNAAIEAARAGEHGRGFSVVADEVRQLAGKTQQSLKQISARLTQLQSA
SNSIEGIINDIEKASNNQRIIADELQETALAVTGQAQVSATVAQDTLEQI
TLQRTHFIAFEQAMANVDKEVSDSQQLSNVISVDVSNQVNDIGLTLKKAS
>CPS_1439 methyl-accepting chemotaxis protein
MLNLTIRRKVVLTTLTAVVLSILIVSAFALNSSRTIIMEAAIERELPAAL
GEVANNLDAQLLLPITVAQTMSSNLYSQQFIATGEQEKNHQQVIAYLKNI
QSEFNTISAFLVSANTGKYFTPSGLFKTLSPQESKDQWFYGFINSGNKYE
LSLDVDEETNIPTLFINYLMKVSGKPSAVVGVGLSLENMANSISQYRIAQ
TGKVFLVDQQGKIKLHPDTQQIGKDLADIGVSNSQNLLSKAQFSSAEFTL
NGTKTLIASRYLDSIGWYVVAEVPKEEVLGGLTQATWALVMMGIIIAVIS
AFVSTWLISRLIAPFGQLADMLAEIGKGGGDLTRRLDDSRQDEAGTMARG
YNQFVSYLSELLQQVSKTGNELAVAIEQIDSQAKSMESEINEQVSRVEQI
ATAMHEMGMTAEEIAGSANNAAQSAQAADETVQQGNNSVVQTIASVSDMS
EQLVSTSTMIAQLAEDARSIDTVVEVIRSVSEQTNLLALNAAIEAARAGE
QGRGFAVVADEVRTLASRSHDSTKEIRNIIEKLQAKTEEVVAAISQSTEL
STTSQTEAGHSGKHLESISESISIMNDMNLQIATATGEQSNVVGEINPHV
TAVADISRANSDIVQQTSIACSELRNKAIHLNELVSRFKFD
>CPS_0168 GGDEF domain protein
MTEQNAEHLCFGMGIFLGSLITLLLGLYLNRHYRRKYLKMLQQLKLAKSN
VTIAEQTMKTLANEQQDSQDLLEERVQERTLELNIALQELESANQELERK
NVLDELTGLHNRRFYDQKIVAEYRRSRRNLTALSLVLIDVDLFKAVNDTH
GHLAGDQCLIWLASHIKQSLKRSTDRAFRYGGEEFCLILPNTDAEGALLF
AEQLRVQVDAQAFQFRDVEIPLTISCGISTYQQQVDIGPEQIFSGADNAL
YQAKHNGRNQTKQHIFTE
>CPS_2388 sensor histidine kinase
MLTIVKSWLPKRLTGQLILLLLSTLTFSQLFTLFFFLSESDYIAEQIETK
QLIRRAAQASNVLATVPEKHHKAMLKAMSVHRVKFYISQSAETDNTASFN
EKSFLAERLLLRKMLNKEYGKVYVYQDLASSSRIATLLEYLYQKLKEPTK
AGNKKPKRLKLFTTAIELKNKQWLMMSVYSRDPFPLWAKTTLISLLIMSL
VLIVIVVFSVKRIIRPLNELADNAKKLGLGESIQPIKEQGPEDVQHAVKA
FNQMLLRLNKMVTHRARSLAAMSHDLRTPLTSMRLHAEFISDEVTQDKII
EKLDEMEHITKATISFAKQDSWLEKSRKVDICALIESLCLDLSDIGLNVT
CDITDKINYSCRPVALKRAFSNLIENGVKYGKCVHVSIFENNKSINIIIA
DQGQGIPEAEQQRMFEAFERLDDSRNQKSGGMGLGMTIALTAIQDHGGEI
KLKNRVEKGLDVIVKLPLN
>CPS_4197 conserved hypothetical protein
MNNVINVIAFLAITLASSLFISAQAAENNYKQGYISDELFIYMHTGPGKQ
FRILGTIIAGSKVKITGAVDGGYSEIIDNKDRTAWVENKYVTTQPGLRFV
VAELNGKIANSSDYSSQLDGEVNELKSKVNLLTNDKKKLSAELKKLTTTL
EKTQAKIKDQDTNIKKQWFFNGALVLGVGLILGLILPRFFARRRGAMDSW
S
>CPS_0143 putative transcriptional regulator
MLTAEEHLTPNKLVIAQVELNFLNRSVRFLGESVTTTGLEFNLLAVLMID
AGSLISREIIAQRIFQRKLDSCDKSINSHIANLRKKLLVISSRPVIKTVK
GQGYIFLTSSCV
>CPS_4925 sensory box sensor histidine kinase
MPIEAEQNIYEKFFNLSIDMLCVANTEGHFQTISPSFTQVLGYSEEELLS
APILDFIHPDDVDKTAQEFAKLNSGQDSLFFENRYRHKNNHYLTFSWNGY
FEGDSGLIYAVARDITEQVKVRNKLQHLQRALAQETIYAETDISGVITKV
NDNFCQISGYSKEELIGNTHKLINSDHHPASFFSEIWKKISSGKIWSGAI
KNRKKNGEYYFVQSILVPIFDNNEKISNFIAIRQDITDKVNSEHDRLKAL
EILSETSSAAKIGGWEMDVATGLLTWTNETFRILDVEQVDGLSPMLPEGL
QLFIAEDQPIIENAVGRAIEFGESYGLELQARTPKGNIKWIYTNGKANYK
DGKIETISGTIQDIHQRKITEIKYNQERQKSIMNAKFAALGELSASVAHE
INNPLGVISGYAELLQLTNTTASPEDILAKSAIILRSCDRITHIVKSLKK
FSRSDEAIQHTSCSLKNLISEAIVLTRPKLKLCMIELQCEYIEDSNILCN
EIEIEQVIVNLINNAIDALSELPDKWIDILVTETTQDYIISITDAGISIP
IDKQLSIFEPFFTTKNTGEGTGLGLSIVKGILDNHGAKISIDNNNKNTSF
VIHFPKLNNKVSKG
>CPS_4377 hypothetical protein
MFYFSITNGIDMTIKRLFLFIVFTFKVQLLSFILVSTAHAQAASEQAVLS
NQVQQLLKVDNEMIDADIVKSLSEKIINNRHDYSNDILAKVYLLSAKVAS
NQGNMNNVFEFTKRGLAANSLDKKIKLALLFKLADVYVARKEYKQLLEVT
EEAVRNSEFSRSVKCRLLSLSYRSVAFAMLGKHQQALADLQQVELGISSS
ELTEHIQLLTILALAYHHLGDYQTSLTMQLKILKLRFEMNQKRNIAQTYL
YLGYAYFYLQRFDDAYNVFWESKKSAEGNNAPINVAHADKWLGIVLMRQK
QFHAALEPLQQAIEVFHQHNMLSERIETSVALVSAKLGVEQITEGYALLN
EVVRLLNGKNIASEYTGFYRMVAEMHFSQENYRLAYDWRKKYSQILLDNL
NDKRKSFSIMQGLSHLAVGKTPKIEPVEESKRLAVKLAESSELSSSFIGK
YEKQRIIIISLSVLVALLILTLVGLFLRSRAQKINRAYQELEKPSHSMAS
PMQTKFTYQLAFKKARKFRYPFHVGYLVVENWQELVFHFNSKTISEVTKG
LASVINEHIAEFDYVGLLNEGEYLLLFEHQSSQEVNEKLDKLVQAVNTRA
FANLGDFSVTMKYSLNMAGFKDIDPYLFLARIDESVNIAQVNPSKAP
>CPS_1400 PAS repeat protein
MLIENAVDFIENANIGIHTVSPEGIIKYANEHELTVLGYTEDEYVGHHVS
EFQFDKSCLEQMMIKLAKFESFSNFPAMVCGKLKMKYILYNSSVYAEDGE
FVHTRCFGNEISKSVYQACKVDYKKSLTNRVD
>CPS_1009 conserved hypothetical protein
MTNHQHPQTTTQWIDLIANSELPAITSTARMLDKFSNDDKSSLPKLSEAI
LHDQGLSSCLLKVANNIQHISINKVTTVSRASVVLGIQSVKNICLTAKLV
SSLLASKSLDINVYEQLTQLMANSFYAGMLAKMMVPNYSEEIQEEVYLAA
MLYRIGESAFWSAGGDVAKKLANYEAKSPQDFNQYCRKEMGTNFSELSKG
LAGTWNLSDLLIKALDQPTTRTDEVKVIYFADKLSAIIAKPEGCEEDYHK
LLKEIAYIVGISVRQLTVRIEHTREQAEKLLSSYGAEILTERINSLPTAE
DFKSLGGDFDTREVVSKDKALLNGFMKLTKLIQNSKDFNEYLQLTLESLA
LTFAFDRSSFLMLVDDRARVKSRLVVNKNAQDDASKINIDIKHSDNVIAR
VISTDTAALINDHQEIRWRDLVTEEISEVIVEGAIAFVPVKIGGKAIGVI
CLQLLSPDQKIETQDFQQICAFIDHLNMCLTMIKYS
>CPS_1757 GGDEF domain protein
MLSFFALFFILMAIISLIAIQKLEYSASRALASRTAEVLASAINQARVSY
SVNAAAKIRLHPDIHVQANYRDHNLAIPNPATFAIELGQSISRPDEGFIL
STYSKYPFKGRKNSAGPQDDFQQYALEKLSTKNNVFERVETLNGLPVLRR
AEAIFMKESCIGCHNSHLSSPRKDWQVGDVRGALDITIPLTADTDDVAMT
VGYAYVMFTSFSGIGLFCMFFTLKRSNNLTKELELKVEERTLLLNELAYT
DALTKIANRRYFDEVSKAMINDVDPILPIALIFYDLDYFKAVNDCFGHDI
GDECLVAVVNAVSKALRQKSDFHARIGGDEFAIILKNVSKDELEKIIVRI
LDNIRLVNIPNEPTLSLTCSIGSSFITKFSEGTTINQVLKVADQALYQAK
NQGRNQWVNKEFSTITMD
>CPS_3089 sensory box/GGDEF/EAL/CBS domain protein
MNLDFIGRDILLHTKTPELNLIVKDIMQSSILTCSPETKINVAASRMRAR
NISSIIIKSNLTLGIWTESDCRKIDFSDQEQFNVSISELMNSPVLTIKQD
IQVNELAIKFRHYGVRHFIVVDADNLPVGIVSQTDVIKNQGIEHYLQAKL
VASSYKKNQQLLQHDCRLDNVAEQMKKYECSSTLIFNSELGQYGIVTERD
LLSLLARGECTKKTAWHHAHYPLKTINADHSLYSAYQQLISHNIRHLAVS
DDNGAIIGTLSMDNIMSDIELAYVEELHQIVQQRDIALRESKKHLLVAEK
IIEASLDGIMITDEQGTIISVNPAFTRVTGYKEAEVLGLNSKILSSGRHT
SDFYQQLWLCILEQGVWQGEIWNKRKNSEIYPQWLTIIEISEGVDNNKVF
AAIFSDISERKLAEKRIENLAFYDELTQLPNRRLFFDRVDMALAIAHRKN
NKMALFFIDLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEGDTVARIG
GDEFTLLLTDMREVDHICKACNRIVEKLRQPYHIEGHALNITTSIGIAVY
PEDGTNEEELMKNADIAMYRAKDIGRNSFQLFTPAMNAHSQERSLIQSHL
RLALVHNELELNYQAQIHGVTGKVMGVEALLRWYNPILGQVSPAQFIPMA
EELGFIAEIDHWVLEHACKQRKLWLDQGLDCGRIAVNISALHFHQGNLVA
SVESVLAQSQLPAELLEVEITEGCFIKQMDKATSILKQLKKMGVKVALDD
FGTGFSSLSYLTSLPIDTLKIDASFIAKLPHNFRESQITSAIITLAQNLN
LDIVAEGVETEAQKIFLIERGCEIMQGYFYNKPVCAKNLPRVIQSSQCGK
IVKPQSSE
>CPS_1527 cheW-like domain protein
MKNYLSELLTEPEVVESLSQPSIAEQAISRPLAHKENQSLENLLKTVNEP
KENTVKKEVNVSSVSKTDLLPIETDKNSAEKHSSPPKSYRQGDFQAMFFK
VAGLTIAVPLIELGGIHKVDKTTSLMGKPDWFKGVMLYRDEKINVVDTAL
WVMPEKCDQALKDSLNYQYIIMLNDSSWGLMAEHLVDTVVLSQDEVKWLD
SSDKRPWLAGLVKEKMCALLDVSALIELLDKGSDIYQE
>CPS_2434 hypothetical protein
MQRLKESQEALTLIYNAYNEVTPNPLAPLDIDDEDGLKKLLNTVMNRESI
SHIQNKKTLKESTELRSSIADVLLLLDGCDIKEIKAAMRKATAATAAATE
AEK
>CPS_3170 sensor histidine kinase
MKLGRSFFNLYFFIISTFIIFSWALDEVWNSYLEQDIESYTGYKTLMMAT
GDYVQKHPKEEWEEIIAGAAKRWELPLKLVSLAEVEAIDHTDHNALSHSN
AHIYYFDDQVMIHYLLKDSDSVITLGPAKMPTRPRVKATYRVMILATFGI
VIFIWLWPMSRDLEQLKRATRDFGQGQFDSTAPAAKSTMIAPMISSFNMM
AARIKRLIEAHKELTNAVSHELRTPLARTKFALQMLDTIKDDEKRAKYQK
QISNDVCELEELINEMLIYAAFDNDKPALNFTSTNLNDLVKFQIASHDQF
VNSIEFINNMPDSYVCCDGHFMDRAVNNFISNAIKYGNDKVRVTLSIENG
QCIICVEDNGDGVSDEFKQVIFDAFSRGDQSRNRETGGFGLGLAIVARIM
EWHQGHASIGDSELGGAAFTLTWPIKMS
>CPS_4684 GGDEF domain protein
MFYLIYSGGVENTGPLWIFIVAPVSVFIHGLKRGLIDIAVFVSIISTLMF
MPTDIIAHANYSTEFKLRLLYSFLTVTFLSALYEYSRNKSYQHTLELSKK
YQQLAHFDPLTQLSNRRDALGILKQEQARMIRSKEPLSIIICDVDYFKKI
NDQYGHNAGDAVLIELAKIFTSNIREQDCVARWGGEEFLFILPQTLARNA
NVFAVKIQEKLQNHLVDYQGKEIKVSVSMGIEQFNGNQNIDEIINSADKY
LYQAKNSGRNQIFPKF
>CPS_4681 GGDEF domain protein
MCYPLALTSMRSISLFFNRFMYFIILLVGVFIPAYSNEHPLELTNEYSVE
LLTEDEGFVSSEIYSIIQDNQDLLWFGTAENGVMRYDSRKITLFEFDSMN
SNGLSHNDAGNLMLDRNGRIWIGTWGGGASLYEPKTGNFQHFINDPLRVD
SISSNRIQSLFHDQEGTIWLGSYDHGLNRYLGNNNFEHIEKDDKVESGLS
HNRIWDIEDNDKQSLWIATSFGLNLYDKNNKTFSHFFPDPDNPTPTGANE
IRSILKTSKNKLYVGTQKGPFTFDKQSGLFTPLKTLDDQYLGQVNSMIED
QEGYLWFVSSKGLFRQSNSGPRIEQFVLDNNNGLRIIFEDSSRTIWVTSE
THGIYKIVPHRKFKSINSSALTAPNDITVDANGDLLIVSSSSQLFKWQIS
SQKLEILSAPIFSNENGYGVNRLLEKPIIFLDDNNILWIAQDDGLAKFNL
ITKQIDLLKYPKSDPSYNEFRELRALNTDKYGNLWIGTYKNGVYRYDPLT
KSFNHLDDSFGLSHPEVLEIFKDNAQNIWVGTGDGVNLWDESNKQFISFK
SEHNNKDSLLGTIVQDIHQSKDGEIWIATQKGLNLYLPKTNSFKHFSRKN
GLPTSLIRAIEDDNSGHLWLTTNKGISKLNPISGKVTNFDSYNGLLGLNY
YANSLVKGGNETLFTSSQRGIEFFNTSAIEANNSEFNIILTGFNKMGHSV
KLEKPYSYVTDIELSYIDYFFSFEFSVLDFISPSKNLYAYKLEGYDDNWI
DIGNRNVASFTNLDGGSYKFLVKATNSSGKWGEKILSINLYVSPPPWKTW
WAYSLYALLTLLVVFIFIYFRTRFQQTEIARQKQFVLALEEQVEEKTASL
NAKASDLIAANKQLEVLTYQDGLTGLYNRRYFDKQLTTEINRHYRQQQSL
SLILCDIDHFKLFNDLYGHQQGDNCLKRVAECIGTNVARMTDANCRYGGE
EFAIILPNTSVEHSTLVAERLCFAIENMKILHEKSKTSNFVTLTIGVVTI
PPKQKTSVDAIILSADKALYMGKKNGRNKVVRAD
>CPS_0127 GGDEF/EAL domain protein
MAIGNKLDLKAMLKIFLKVCFNRLDLTSAHIYVYCDQSGMPSKLLPLKGT
SYQYFLSIPKNKRGQSWSKSSILTNFARQLNSSQKTLSFQCENGQYLFGF
IIPDYGLLTFETHYAIADEVQKALQPILQKLATSCYTSIVHDSLVKEVLS
RQLIEEKVAFQAQHDGLTHLFNRQHINHLLGNAIEDARINNKIGSVLFID
LNRFKPINDAMGHTVGDKILLTLAHRLHSLSSEHIDIGRFGGDQFTILLK
NLKDDYQETINLLIAQINQLLTAPFVIDTNSYKLTCSIGYSLFPLQSSTV
NNLIKFADIAMYEAKRAKTQQGKQYQRVMSEKIKRRLAYVDDMKQGLEQG
DFKLYYQAQYNHHGDIIGAEALLRWQHPVHGKESPAVYIPIAEESDLILA
IGQWVLEQACRDIKKLEQLSLPESFNKIAINISAKQLIQHDFQEIVLNAV
KQNDIPAKRLALELTENLLVENIEDSIKLIASLKENAIDCAIDDFGTGYS
SLTYLKRIPASVLKIDRSFVTNIAQSSESAAIASMIISLGKTLNMDILAE
GVETQEELNCLKELGCFHYQGFYFSGPLPFDEFAKLLN
>CPS_2733 methyl-accepting chemotaxis protein
MSTILVSIVLITKGAYDYKVVKSSLLVEANRSITLVSERLKLNLPAAIWM
DLSDQIVKIASSELETPYVYGIEIKTVDGEVKYTKHNQGIKGAEIKQPLV
HDEYDEKTIVGDIVISIDQQAINTKINAALIQIIIGVVLVDVLLVLILFI
LTRIIVTDPLKKVIIAVTDIAHGDGDLTKRLEINTQDEMGELAGQINHFF
NKTQAMINTIITTTQVISDTSSAVKSDVSEANVLFEKQYIEIDMLATAIT
EMAASTKDISLTSQQSSQSAFDAKEQANEVGLVVNKSMLSVNELSSDLDN
ASQVISVLATTVDQMVGVIDVIKAIAEQTNLLALNAAIEAARAGEQGRGF
AVVADEVRALASRTQQSTEEISQMIAELQQGTSSAVVVVQNSKTKGEETT
EMMLHSVEYITKIISASDDISDTSLQISTSVQEQSNVTSSLDVNINGIVS
SGQESNGLINQIEVKANELDDHVNNLQTLTSQFKV
>CPS_0763 methyl-accepting chemotaxis protein
MNLLNNLVFKQKLILLVLIPLLATLYFSLNNLNSLTSKQGQLEEIHDLIT
LTVANNALVHELQKERGATAVYLGSKGENFSYELKEQRKLTDKAHTLLNA
KLKVFSSENDKVNNIILTVKNGLLKLDRIRARSDELSISLNDAIGYYTTQ
NHEMLSLAEFFSTISPTETVSNAIGYYVLLEAKERAGIERAVASGGFAMD
KFTQAAFQKFTSLVALQDSYLEQFSAKASSNTINAYKNSLNSNAVIEVNR
MRNVAVSVGQAGPFNIDASVWFKSATGRINLLKDIENLVADEFITDIDKL
LHEASRGVSINLIIIIITFIMTIFIVYVILTNLIKQLNEISVTMEKVTEH
NDLTVQAGVFSTDELGNIAKGLNKTLSTFSNAITEIKSSSISLAASAQQS
SVIVNNNVDSLQQQRDETAQVATAIEEMSATVQEVSRNANEAMSSTHQVN
TQAIESQTVVGNSLEAINNLATEVSEIGTLISGLHSTTSNISNVIDVIKG
IADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQDSTIEIEEI
INQLQSEASNANTMVAGTQKRADESIDGAHQIELSLTSIVTAVSDINLMI
EQIATAAEEQVSVTEDINKNVNDIDKKSSEITSGAQDVSLAASEQVEIAN
TLESLAAKFVV
>CPS_1751 conserved hypothetical protein
MKITFKNIAVVTSLCSALVLAPASFAGHNGVNYQGERDNSYHQMSEKKFA
KLSRKLDLSESQQADIKALRSEEKAQMEVLKPAMKAFREQVKTLMSADNF
DEEAFVQLQAGNQDVFAAMALTKAKSKFAMKSVLTEEQLAKFRSMKHKRS
RR
>CPS_2360 EF hand domain protein
MKKLNLIPFALFLIVSFNSQAGKQEYFNKIDIDQNQVLDKSEFSKHMKKY
LAKQSITDKTIQNKKVNNGFKRKDSNSDGQLNFAEFSSQK
>CPS_3928 hypothetical protein
MNKLAVLAFALLLFFSTMLWYLANSSLNDYLKSQVILQSHYYSSQEAKLL
SADYSDNTGITNFTDFSLSNIDGLIQPLLFKADTISAQLAKVPTRQLDSP
SIQKKTTTIVHIEELRLGSLQAWSEISKTSETGKTNLEVLFDRINAQLAT
DYPALYPQISAGLYAKMYPERSEKLALEELDTKPQVQTVETNQAIIASNE
AKQKKRLLGKALTRVKISSVIIDDLTLTVINENKTQTKQFKNIQLGSFGN
ENGLESNQLGGELLKQILSKLIKLENSNAMKN
>CPS_2523 sensor histidine kinase
MINNNKTNQPQIPTPKNPVKLHSLSRKIVSQFCLFTLLISAVWGGFCFIL
MYNIEDEFIEREVRQEAQFLQQRYDQDKSWSAPRVSHMTLYFSKSTLPDD
IKQRYIAEPNRKEFSGEDGRHYHLLALPKSEDVYLVAEVSEMLLVRPFTK
GILKLMLIAGLILVLLAFVIAWQIGRKTAMPLKQLADLVNGVAPEQIPDK
FAQQFPNNEIGILAQTLETAMTRINQSLVREKCFTRDVSHELRTPVSIIK
NAVEVYRNQHSTDVSNPVIDRISQASTQMEQTVTTLLTLAREEHTEVDKK
HIKILPLIEQSIIDQNHLINNKPIQVEVNDNCNVDVYAQSGMLTVLLDNL
IANAFQYTQQGKVIIEMQDKTLIVADTGPGIQQSISGNITEPAVKGSQST
GYGFGLSIVKRLCEHQNWLFTLSSEQGTKISITLK
>CPS_3879 putative ABC transporter, periplasmic substrate-binding protein
MKNSLLIIFLLLSFTARSNEEELKVVTEDWPPFILKGQEVSGIVTSNIRE
ILAYTDIKYSIDVYPWARSFHLATTNPNILIYSIYRTKQRESKFHWFCPL
YKSTPIHVYKLASNEINIDSLEALKTSVVGIMRGDNSHSYFLQQGFQEGV
NLDISSNEETNLKKLIKGRIDVVIQSKESLNYRLGLLGAADLNLMSGLEI
SKGESAEHCMALSLGTKPETINKIKKGFEQWQKTQ
>CPS_4619 HD domain protein
MLIEKELSELTVGHYVVKIIQQEGCFSLTAAGHIKSKAVINHLKSKNVHR
VLIDDSKTLLSSSHEKSATVDAPSIVKNKELKHAKAIFDQSKSIQKKLFH
DALSGSCLDLSPVVEVTNKSIDAIFNSPDSLACMLNIREKDEYLLEHSVA
VSVYITIFSRYLDLERHIIEQLSIGAFLHDIGKIKIPDKILNKPGKLTVD
EFTIMKTHANHSIAIIKETPGISALSLEVAALHHEKLDGSGYPFQVDGED
ISQYGRMIAICDIFDALTATRVYKEGFTHGKAFSILRELAKQGQLDASLV
DHFIKCVGVFPVGSLVQLKSNKLALVQERNDKDPINPQVHSFYSVKLNQF
LNKQEIDLSGSEDSIVKSVRAEEFDLDMKQIVDMLLMEG
>CPS_0680 sensor histidine kinase
MRSLYISIIFTVLGSLFFIGWGLDELVEYSTENKVTETQGTIVYRQLLDG
LSSELSSLSHSQLSEKVNLFQQHYQLKASLASSKNIALPSSLVAELNQQG
GLLLASSHNQYLVKNIANHPDYLLRFELPIETVDDDNFNFVLTLILYVSI
CGILILWLIPLTRRLYLLNNAAAKIGSGQLDARIAKSRFSYIKMLEKSFN
TMAGKIENLVADNKILARSLSHDIRTPMSCLRFGIEAALDSKSMDKKNSY
LTRMDNELTRMEEMTSLFLDYASMERQALNLKKQQTDIQALIASAITDCQ
VLATQKGIEISTISPEKALSYGLDYHWCYRAIVNLISNAIGYADSNIVIL
LESSNNAISITVADDGKGISEDKLEIIFNPFVKLDADRTREQGHFGLGLA
ICSKVMDWHHGSISAANGTQLCGANFTLSFPVH
>CPS_4245 GGDEF domain protein
MRFNYRIVFIITALVFTLSATLTVINYLTSMETTREQLKNSALPLTIDNI
YTEIQKNIIEPNLIASMMAHDTFLIDWLSHEEDDQQQIVHYLETIQNKYQ
MFTAFLVSDKSRNYYSAKGMLDKVDKKSPNSQWYLDFQKTSELSEINIDY
NTHMGSELIMFINHKILDSDYHMIGATGVGLKTSYINDMLKVFRQRYQFS
VYFVDVNGKVVIAEQNVKKLNNLSDIPDLARQLSDIIGKGSQVFEYTEAG
EAFLLNRKYISELDLYIIVEAKVNNFTQAAEETFYLNVLLSTVITLLISF
IIVLYVRKIHLKLDKLASNDDLTNLPNRRSFHDELAKQLLLKERYNSELS
LLFIDIDNFKKVNDTKGHDVGDKVLKSLANVLNGNVRKSDFVARWGGEEF
IILLIGSDINQAQVIAEQLRSQIANSKHLSQYAQQQVTISLGATSVTNED
NIDTILKRADLALYKAKSKGKNCVVSD
>CPS_1621 methyl-accepting chemotaxis protein
MNNSFNNNEVRFADTVQLVSITDLDGRITYANSEFCEVAGYALEELVGQH
HNIVRHPNMPKAAFTDLWEKLKQGDSWRGMVKNRCKNGGFYWVDAYVTPL
YENGAIKGYQSVRTCPTENQKVKAQQLYDELNRGKSISDIRANISIKRLF
ATIIIISACLVDWIYVDSIISIITLLMSFMLVFITFTEELVAFPKAAKKI
KLLFDSPSRIIYSGKGLTNILNYPVELYKARVGTILGRSSDSGRVLVNLA
SELEKVSSEMLEGINEENSHLAQFATAITEMSATIDEVSSNTTHTHDKVI
NIQNECKQNIDVIEVSQNRILNLTGDVENAATNAIALVTDVDKISKVMSE
IQGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDATVQI
QASVQELQTTLKEWSKVMLVNKSNAEKCSEDTVNIKYAMESIIINVTDVS
DMTAQIATATEEQSVVANQINQSILNIDAISKNNAVLAQQVNKSGVDVYE
NAAIIDALSDTFK
>CPS_1820 sensor histidine kinase
MQTLKALLHFYSTITAKQILIGLVSLSIVAFFITQTAIADRKESLSWEPW
LLEYSAVYCYGLVCPIIIFCCKKWSLDETHRYKSMLKVAILYIPFTFLFI
SLMIGTRHLAYLLIEGRLWDNGDLLTRYIYEYPKTIGFYCAIVFGAYTKV
YFETYQKEQIHAAKLNEQLLTAQIAVLRNQLQPHFLFNTLNLISSTMYQD
VDKADSIIMRLGNLLRYSLAAEQKPWVTFNEELQAMTSFLEIAQLRFGDR
LSTKIEIEPQVESVLIPAMLLQPLLENAVKYGIEPSDDMGGVHLKAYSED
GMLCITIMNPLLEYENQQPSFGIGLQNTKERLELLYGDSANVSLVQQGNN
SIILTLTLPMQ
>CPS_0999 serine/threonine protein kinase domain protein
MDNKLPHYSRERLLGEGGMGKVYLAQDNQLQRQVAIKELTYQPKDDEVNH
ALKEARLLARVNHSNIIQIYNVHDEGDHISLVMEYFNSKTLTQFQQEAYT
TLVQKLDLLQQLSAGLAAAHKNGVIHCDLKPSNILVNDQGQLKITDFGIA
LLASNESQNSEQTASNNPLQFGSLLFMSPEQIKLQAVDYRSDIFSFGIIA
YQLMVGSHPFAYGNNGGSATDVAKRICEHTPEHAKNLMLNAPSALTDLLM
EMLVKPLEQRTLTAEAIENRLKHIRTALLQAEISEQATMPLSSGSANIAG
DDTGQYTQAVHTTLLSQNTQIVQPADNLQASWFKQNYKTVASIALLCLVM
ILFVGFYNTQEVETKQVVILKPTLADSSLMAPMQQDLVISAVEDALRQAV
INTKNMYLISQREVNAITKEYPDDLNKLRQAVGASDIISTTLECDNSRCK
VSFSRLVVNDNSSDNLSVKSEKNWLAPVDKFNAIFSTSQTQFASLFPEES
EVNQSGLVQRPINENDYRNYIELYSQIKGQGEYSVESLTKLETLLTRSPY
LYAAYGLFRETASNLYTDSRDEIHLKRLELVLQNSPPEYRYSVYHAIDSF
FVAYKIKELDTAQQQIIEAKNKGASSFVLSELNAILFFSKGQYQKAADTF
EEALVLRPSTTLLYNLAFSYWRMGDLSKAEDALNKMLEIIPGNYKAQQLQ
ANIWLLQGKLELAITAYEKIVAALSNGRDLTNLSLAYALNKQYKKSLIYA
KKAVDLSPKNRIRRLNLADIEFILGRVKSSNFNYKKVIDAPVDNNKYRYW
LDIAQAQLQLNQQNLAIEALNKAKHLAPDNGEVAYTSALVYSVLGERVSA
IFEVNKALANKVGSVWFNLPWFDSLCDDKEFELLMVKYNNQKRCRT
>CPS_4270 sensor histidine kinase
MTSLNNPKKSKRLPRQLTLSFFGFSLSFLNKISIKKLTLIGFTFVAMPLV
MALIFGANKASELAQKSTSAIYNVAQLTQLNSKLDETIAKLERSASQFVV
LKDDELLAIFSGHHKALIDIIQETSAKQQDKVLKEQLTSLKAESDRIKEL
MLNENIDTFSLEEIQQEFKPLQLINEQLEKRSTFVVNQQVLDIQQTTEEI
SDNILERLYIIPITLLIAGVFIILITKPLKRLTDEIQLLEQGSFEQEINL
HGPAEVREIADALENMRQRLHALELQKSSFIRHISHELKTPLAAIREGTE
LIYDNSVGPLNEDQQEICDIIRVSVNRLQRLIEDLLDFNIVLDSTSLHGL
EKISLSELINDACNVRKLDIKSKNLTMKCNNSPYFVYSNSKQLSVILDNI
LSNAIKYSPVNGDITITYSSSKECITINIIDQGPGIDPSLSEKVFDAFYQ
GKAPINSQIKGSGLGLTIVKELLLRLNGKIEVIPARKISAANESGACITI
TLPNTQTDNEL
>CPS_2113 bacterial extracellular solute-binding proteins, family 3/GGDEF domain protein
MNFFYKLTSYIILITLFVVIFSQTVFAEKADITVKQPLTIAINETSFPYH
SIDEQGNAIGLMADMWRLWAKKQQIEVQFIVLPWLETLSEVAKGNIDIHG
GLSIVDSRRETLQFSQPLFSIYTHLYVNQQLSNVNNLADLKPYSIGVVKG
SAHIENLQKYHPEFALKTYDNRHDLYRGALNNEILVFTGLEKLSDNFPDY
DTLRQRFPPHKVLRYQQGDYGVAVAKGNNSLLNLIEQGFAQVSREERAAI
ERKWLGLTKQKDSLLVAFSSHYPPYMGVSPSGEPQGLLIEVWRLWSKKVG
INVEFVPRDMTEGLDLITEQKADILLAYPDHVKTSNDIAFANPIYSSTVE
VFLNNRIKDVKGKPFESLEQFNQQFNGGVIGIWQDSTFKDQLLAQYPQLN
VRYFSSLITMLDAAERDEISGIVGLVDLISARLVQSNLQTLFYRLDSPVI
TLKLSPVIHHKNNKLVEIVNRGFNELDINSLIKIEDRWLNGNAGEHYYKK
QAQKIMLSDADKAFLASHGKINLGIIKNLSPIEFIDEQGKFSGINRDITH
LISDSTGIKFNYLPFDSWQQLYKALLDNKIDMLGSITPTVEREKLLIFTD
SYWQMPWVMVHPQYYGRKSKLEDFYGKQVAIVKGYYLIAKLRKIHPLITF
KLVDNREQALVALQQERVDGFITTMASATQLLKQENIVTLMISMMEDVSL
EKSHFGINKQLPLLKGIINKGLLSITEKEKQAIYDNWFSLAINTGLDKNV
VLQVGAQIGVIILLVLGVIVMWNRRLQVEIKHREQLEKIMKHMATHDELT
GLANRVLLKDRLSTAIAFHQRQSLKMAVLFIDLDGFKNINDTHGHGVGDE
LLQQVALRLQGCVRSSDTVVRFGGDEFVLLLTGLNSPNEAAYVAEKVLRM
MQKEFELSKTNAFIGCSIGIAMYPNDGDNDTDLLKIADTMMYKVKAAGKN
HYIFN
>CPS_0778 sigma-54 dependent DNA-binding response regulator, Fis family
MNKKILIADDDINIIASLKFVLADEGFDIVAVTTPQAALENLKIQSVDLI
LLDMNFQQDTTSGAEGVQLVEAITELELNVPIIVMTGWATIDIAVEAMQA
GAKDFIQKPWKNERMLSAIDNQLALAKSDKKAQRLSQQNQLLTSQAHPGS
RAGIIAQSQPMQELLSTLDDLAKSDMSILLTGDNGTGKSMLAAYVHSVSS
REKHSFVPVNMGAIPESLFESEMFGHVKGAFTDAKENRIGRFEMAEQGTL
FLDELANIPFAQQAKLLHVLEAQQFEAVGSSKSLHADVRIISATNSDLLA
DIKNNTFRQDLYYRLNTIELRVPSLSERAEDIPALAAHFLESFSAKYHRA
CPKLTDQAINAMQQYDWPGNIRELSHMMERVLFTCKKDSIETAELMLTGA
NNAENGAVESLDDPTLSLDEIERKTLIKRLKFHRGNATETAKSLGLSRSG
YYRRLSKYELD
>CPS_1743 sensory box/GGDEF/EAL domain protein
MNVHRITSIVKSISDINSDNFFDEICLSLSRAIDADFVFIASIDDSKTNA
TSIAVANRGCIVDNFTYALKSSPCAEVSNESICTHRCNIQHLYPDDLLLK
DMKIDGYVGIPLKTSKGQVSAILVALFEDNISNVLEVETLFMLFSGLIEK
EIHKSSYLKKIEFSNNIIANTHEAIMVCDKDKFITYINPSFTRMTGYTQA
DLHGKTPKILNSGKQTKAFYQTMWADINKNGHWQGEIWNKCKNGSEYLEW
LSITAIVDESNELTHYTAFFSDITEQYIAKEKIKFQDSYDDLTKTANKKT
LFTFIERSIIQYSNQLECTTPAALLVIDIDFFNKFNSLYSHAFGDEVLMQ
VSSRLQSLIRSSDIVARTSGDNFALFINHITNQDSIVYFIDKVTHAFLKP
FVIEGINIKITLSIGVACFRQDTQDVHRLFEKAEQAMFAAKDNGRNSYEF
YSQLLSDKANKEEQLKLSLESAIENNDFCVVYQPIVSLKNKSVTKFEVLI
RWNMHGKWVSPVDFIPTAEKFGLISKIGDLVLNLACTELCKLRKMGFSDI
VFNVNRSIYEFSSGVNDISWLDTIKKYDLNPESICFELTESVLAPENDRC
ITLLNKLQSAGCTIALDDFGTGYSSLNYLRRFPIDTLKIDRGFISEMTKV
EGDKVLVSAIISMAKALGISVVAEGVELKQEVDILVSLGCDYIQGYYFSK
PLAPELLSQYLTDFEYGNQ
>CPS_0244 putative regulatory protein
MTNVYSLNNDDEVMFDQASIWIARMDRSLTELEQAEFKAWLSESEQHQKL
IIEMASMWDKMDSLDRLADLFPTSDKTDSKFKTAPKTAQWPLALAASLVL
ALFVVFFTDITLNSLWQEEQQFVRYETAVGESSTIYLPDNSKVLLNTDSV
LLVRYTDDYRLLDLQRGELHVEVAHDKSRPLSVVANHKVIQAVGTAFSVQ
VKTSEVELIVTEGRVIIGQLNEKQEVNETALVIPSSSLAVSKGEIASLAV
ANSVSVIDNKAIKKSLSWRQGNLVFNGETLAEAMEEVSRYTSVTFEIADE
DLKKIRIAGRFKTGDVKGLISVLKHNFNIKTDRVNKGLVVLRKQS
>CPS_4645 hypothetical protein
MHVSMKTFLQLSFISMLCISHQSFADHSPNALQVRTIAIAPYGIDDSGKL
SGIYYELTHSLLIKSGLASEHHIFPYGRIIHELKLGKTDLTIMFKYKELA
NYVDYIHPLPALKNVVIGRHGHDYQNIEQLEGLNIAYLNGAKFSYEVDNN
PKIHKQIVVDFNQGLLMLKKGRVDAIIGPMKPIISGAKQLGLSKSFFGKP
LIVSERTPWLQLSKQSKSHISAEKIKATFSKMIAQGALENLQLKYQ
>CPS_0756 sensory box sensor histidine kinase/DNA-binding response regulator, AraC family
MCLVTFIPYPFVANWLTMHFESALNFALFTLQIISSIFLFFCFKKNTSRS
FKLFWQYLLLAALAIVASKLLNSTPASVSQQLYQDFASLFVYFFILLAIE
TNPHLSDVPLNKYIGGRVPAIFFTLICFCYFILLPAEFSGKIYQTAKPSL
LFHLVINSLIIARLIQCLVSVKDNFWRYSFALLSGSAVFLLIGNISAFID
KDSVFISTNSYSLQLIALLPYFLLILAANITLKVSKLPIAIEKEPHPEHY
ILLLMLIPTAAHLYGYEHKLFYSVNSNLQSITLLFWLFVGATLLSGIAIT
HRSQTKKLKQNLLSEKNQHQQLNSLNNDLTDSLINSEDKAIVNASNNAIL
TTSITGEILSANPAAVQMFQSLEQELKGISVSRLFAEKDEMHFFFDFQSN
VYSLQRKALGISVECLSLRSDGTEFPAQAELQWADRAKQPLIVITFINLS
ARKHAERQTLELKDKFIANISHEFRTPLTIINGIIDRYITKTTNELESEE
LTTAKRNGLRLVRMVEQLLELSRLSDNPQLSLSTYRLQTLMMMPVDSFSR
MASQNNLSFTSNIPDDLWLDCDGQAFEKIIFNLLANAIKYTPNGGSVQVN
AYVEQDTIILNVIDSGIGINKDSLDKIFGRFQRADDVKNQATFGVGIGLS
LVSELVKAHGWRISLVSEHGHGSKFSLSIPLAPANEVEAEISMSISENEV
TSLLTEQRCVANIESNHSQKVVLVIEDNLDMQSHIKQVIEQQHHCILAGS
GELGLQLAQEYIPDLIVCDLMLTGIDGFEVLTQLKQDEMTAHIPVILLTA
RSDLESRLQGLNLNADEYLSKPFNQHELLTRIQNLITNRQQLQKRYLQKF
NEERKAERKSTSQQNVANLTQETVEQISLEDKFLHKLEALIAKHYTEPEL
DISLLAKELAMSERQLQRKIKVILGTTPNNFIKEFRLKKAQALLTSGAQI
GRIALDVGFSSQTYFGRCFKESYHCTPKQYQQKMAQQNSTPDC
>CPS_0704 conserved hypothetical protein
MLIVDQSVLDDIGRGFSVPAQPKLLLELLTLMAEANPDINAISRAISKDI
AVSATILKTINSPLYGLGRTITDIKMSVNYIGIFGVVMLVTGSLLKKSFD
PKSCSINLEDFWQVTSDIANAAMLLGQRYKPEIANDRFFSLGLFHACGVP
VMAMKYNDYQQLLDNALTTPEIALTQAEEQHYGVNHATIGYYVASSWRLP
KDVCQIILQHRDRNFISELNGSQEQDLFAVLKLSEQLISMKYSDFSSADW
PYVQENVCKILAIDEATLQSLVSEFAVST
>CPS_1259 putative sensor histidine kinase
MIESWNKTLAVVAKLASVPVALVMKIEKHNIIVFSKNTGTSDNPYTIGNS
ECLNGSGLYCEQVIKSQKRLNIPNALFDENWNNNPDLKLNMIAYLGLPIL
DDTGSPFGTLCILDNKEHVFSETTIGLLEAIKQSFEVQLKQLHQQHILDE
KQKLEELSILISGLSHEINTPLGIGITATSIIESNIENIQQKLASKSLSQ
NTLALGLSTIKESVSLLSNSLNHTAEQVSKLQDLLVSNDVKNYQLIELSS
LVKNTFKKHKDILNIHNVKYRIKHQDNDNTQAFIAPNLLQQVLLILCKNS
LEHGLVGIENPSISIEFENYLDLIKLHFRDNGQGIANSEHIKVFNPFYTT
KRATGSSGIGLSLAKRIVTQQLHGEISIMDSSSGVHFVITLPKLADFSSS
K
>CPS_4084 putative granule-associated protein
MFTQLTEQLTNQFTTAMKSFSNTAQVETAMKPLNSLVELNTKTVEQLISQ
QTALITSILNDSAAQTKALSSQTDFTAAVESQKSFNEALQAKVSNSAKEA
FDVVSKTSEEVTSLVKDSVKFDK
>CPS_2660 methyl-accepting chemotaxis protein
MVIFLPVEYSIKLFGLKLTLICLITLMLTLINFVPLDGTTSSVLFSAVII
YFFVGLTLTVSHQEHQFNSIINSLDPISFDYRSLKFDTLLSKNTTISLLN
SFRELSRINQQQKNKLKEVNHSASQVIASTTCLSNNVEKQFNATSSTAAA
ITEMSQSISEVSSKISAVHNSAMHADEIVQSGQIHIISLTGAILEVSKEV
SQTQQGMQELDELAQEVTLITESIRKISSQINLLGLNASIEAARAGSVGR
GFAVVAEEVRNLAISTHSSSEHIANKINQVLSQSSDTVESMKLVVEKTNA
CGEKAKSVNKMLKDIALATNSVQQETEVVSVNAEQQVLATEEISRHVEQI
VQSSEANADIAKQTELVAEHLRKLTS
>CPS_2622 universal stress protein family
MSKLLYLVAVDGGEWGERAADRAIHLAEKTHAKVKLVTVIDWPYIHPMII
EGAAAPLLDKEAEEMTVKAKVITPLVEKYNTLSLNITTELLWGDPAVILK
EQVEVTNADMIFVGRQGRSSVVDTLFGSVANKLAHSVSVPIVLVP
>CPS_3259 sensor histidine kinase
MIKTTVSFALARFVFISCVGLAVIITSLVSTHVVDLVNSEYEKIAKGEIT
ALNSSYRVFLNHHLILLKEQSQESLFVQGIMQPKRNIGKIKDYMAGLTLL
GLKYDETLLDFEGSTLHSTSATDTNYQEFPWVKAILNEEQFSSIQILAVE
GRYFWCVAFPVIYNKHVEGVLLANIPLETILAAQIDVEVLDGLMIEVVKG
TKTIAKFGKQAVGTKQTIQWHDAGVSFNYTVDEAYRNDALYDLVIQMGSY
IILAIVLTTLLAYLYGYRYFVKPILALSQLTSSLDKGHEPDALQGDLRFM
EFADLFNQFNLMSEKVARRERALKESYEKLSNTNDELKQSESQLVQSEKM
ASIGVLAAGVAHEINNPIGFIRSNLEVLEDYFSDVEKYYYEFNSTLASEE
DKENHKKLAKKYELEFLFKDTPPLIKSSIAGVDRVSEIVKNLKTFARIDQ
VEKALVDINEGLNATLNMVHNELKYSCKVHIDLQPLPKVHAFPGKLNQVF
MNLLINAGQSITDKGDIFVRTFVEEDNIIIEIEDTGSGIDSENITQIFTP
FYTSKPIGEGTGLGLSISHQIIEQHNGKIRVKSVLGKGSCFSVSIPIS
>CPS_3670 protein kinase domain protein
MIKRFLPIYHTGWFYLLLLFWGFSFWYASIGGLNQINLLNIQWLSQLESS
PVLSDKKPTLNANDILTLHSEFNGQDIKSVTTLLSYYPNSQITLLGQQSS
SFMNKLEAYLSSKPRNSKIVIGSSQVSSASPLKSQATMHFSPLLNWFRFS
SKIDTELLSSKYFIFSPFLQSKRQTFPLIWRKDGMLYLTLPGEIIKQLSS
NTELSIKQDWQLSLLTQVNTLAPKKYPLGFFGEVFISENLPRVNQINQER
QERSETVLPKLSSVSQFIQQYSSSANTNSRPNYKVIFITDNNYSQDKVLK
TLLGKLLQEDYVYQSLVIILFAWLLLLLGISLTWFIGQLSLKQQSISVLS
YVVLLFILQYVFFNQGQWLEVPPIIISIMGTWLLLLAYQKEYKLFLAALN
SQKTPYKETNEFLVPPNSTVESKVKSKIRAKLKSLLTNKRVKSPQVKHSS
FLPEENTNAASHNQFPPINKPSPVSGNDIKQTLVIVDNPVTNTISTTHQT
RVENFGRYQVEGVLGKGAMGIVYQGVDPKINRHVAIKTLQLSDDIDSPEF
GEAKARFFREAQTAGGLSHANIVTIYDVGEDNHLGYIAMDLLTGAPLSLF
TQADKILPTPLVYQLLIQITDALEYAHNQNVVHRDIKPANIIYDDDLLKV
TVTDFGIAYVSDNSNTRTGIIMGSPYYMSPEQILGLKVDGRSDIFSLGVT
FYQLLCGHLPFEGESIATVAYQITKAKAIAVNQRNTNLPTSAMRICSKAM
HKDIDKRFQSMSEFKLALTNALKRDFKITAN
>CPS_2714 DNA-binding response regulator
MNILLVEDSVKLRRSLRIGLSGVGFTVDETGDGAEALSMAIAEDYDIIIL
DLMLPSVDGIEILKTLRRLKKQSKVLILSAKDLVGDRIEGLLSGADDYMT
KPFSFDELHARLLTLTRRGGLLVDNDCIMLHGYRIDLQLKSLLFKTEEIE
LTPTEYKIIECLFLNKNKVVSIEKMSEFIVGRYDAIAKNSLEAHLSSIRK
KVKHLEEQLPIKNKRGFGYIATESLCHQ
>CPS_2793 putative amino acid-binding protein
MCSKASAHEVLMAFSQEIPPYIIETSNSGIEIDIISAALAYKGHTLKPLY
FPLGRVPIAFRQNQVDAAMGDMGVHLKDGFYANPAVIYDNIFITLKSRNI
TINKPSDLDSLHVASFQGAEKRYPDWLNNVVKENRFFGVSDQLKQVELLQ
LGRFDVVLCDRYIFKYFVNKIELMKELEISDVDEHNFITVDPMNYRPVFR
DKQIRDDFNLGLRYLKESGEFQKIYDKYLAS
>CPS_1882 sensory box sensor histidine kinase/response regulator
MSDQSLEEELAELKKQNTKLKKINDALMQRVEDSGENQYAPYTAFEHSVH
LAEQVREKTQTLNETLAKLERSNHALKQANAQANLFKQRFIDAIESISEA
FVLLDSKGRIILQNSNFANFWLDSGLPITEGVNLKDLKDLAKTRGIIQRA
SPGDAFASPVYQLSDGRWFQLNEHQTSEGGWVMLYTDITAVKTAESARYE
RGMAQKSLLLQNLIDNISQGVVLISSHNKIEVWNTRFAQISQLSPHLLRG
TPTTDNMQHLTELDLAQKSSTNNYSYTQTLINGTVLEIKSHRLKNGKTIK
TYSDITERHRYAESLRKSESWLRLITDNVPAMIAYVGKDLKYQFTNQVYV
DWYGWPQGGLNGLELEQSRVHSNFTKIRRYVDRALEGESVSFTIDEKNKF
GESSYLLKSYVPNRDVNGDVLGFFVLIRDITERRKNALALQKAHDQLEVR
VQERTSQLQNLNDKLQVEVEDRRQAQSNLVKAKSEAEFANVSKTKFLAAV
SHDLLQPLNAAQLFTSSLMERPLEDKTKNQLNSVANSLDDLENLISTLVD
ISKLDAGVVKADKSSFKLSELLNNLVSEYQQISGQFQVELHYVSSDVVVN
SDSVLLARILRNFLSNAFRYTNNGKVLLGCRRQGNHVSIEVWDNGTGIAQ
DQIKEIFKEFKRLKASQTAFRNGLGLGLAIVDKISKVLEHPINVNSALGK
GSVFSVKVPLGKISDLPQSSDPLNYIMDTPVLAKSKIWLIDNDASVCAGM
SQLLEGWECVVITATSLEDLQQQVDISHDHADILIVDYHLDDGVNGFDVA
KEINQSRDKPLPVMMITANYSKQLKKEVKDSEILLLNKPVKPMKLKTSML
YLLK
>CPS_4924 response regulator
MSIKVVYIDDEEMLCQMFKEYLHSDEINLAVFTDEEPGIEYCNNSNPDLI
FIDYRLKKQNGTDVANAITSDSIKILITGELDVTMDTCFDHKIEKPYRLA
DIKNFIVEAFENKGLQKL
>CPS_0481 FHA domain protein
MEVGMEVTQRTEDYTAEIEPTKQIKNDDLSLEQGEIIIEEISRNHKLLHR
HKLKRNEVSIGRNYHNDIILTDPHICPQHLSLKYSQGIWHLNDNNSVNGT
LLENNLDKRQDAHQQVINDGDVIILGKSQLRVLFSDHQVSNTIALSPFES
LIDLIRHPIAVFISVALFMLIAGNISYLNQQVETNISQLFVSAFSMSLLF
SLWPAGVALVSHLTKNEPRILAQFGISFVFFILMWFSDLLEEVVAFNSAS
NSALGLLITLLPILLAFSLFWLNSYIGFHMSAKRRIVVAISITALLFGGT
YLLQYSKKREFNPHPNYNATIMAPVFLIAPSNSVDDFVKQSNALFEQASE
AALEED
>CPS_1205 sensor histidine kinase
MKRTSISRKLLTRVLSVYFILTISVTGIQIIAEYFNTKSHINSELLTLQK
TISGSLTRAVWELNTQQAVDISEGLIAIPMIKGITVTDEANNVITQLGEV
LSAPSETSQDTFSEHQSISSLAEGLFGHSFPLIFEFSGRTTTVGTVTLLS
SNDVIFSRIEVGIYFLIGNAIVKTTFLVFLFLLAFSKLLTEPLQELTDQM
KQLDLHDPEASKFHIMNDEKNELNILEDAYNNLIDELVEFKDKLSLSQRE
TNLANDKLDEQNLLLEQEVARKTSTLSSTLLRMEVQQKEMLEQQNELKAE
NNRRRKTESTLMTTNKELKNSILELNKAQDRLLEAEKMASLGQLSAEVSH
EVNTPIGISITSTSYLADIITKLQQDISAQKLSKRTIDCFISNAQHSITL
LSNNLQRAAELITSFKQVAVDQTNDKVRLINISKYLDEIIQSIHPKLKKT
NHCVKINCDPHIEIYTHPGAIAQIIINLIINSIIHAFHDINRGTITIDVT
VEQQRLIILYRDNGTGINEEQLDKLFDPFYTTQADKGGTGLGTHIIKNLV
VGTLNGSIDAYSGSEGGLSYRMTLPDMRYS
>CPS_4375 GGDEF/EAL domain protein
MNRFNVKYFVLLIIVIIIIALSALFAQLYSDKLPLNLTAIVSYVFMVLTA
SVLALFCIQKLLISTSLTDDSKAISVEELFSYTHDPTTNLPTAQQALRAF
DVAIKADTGQRYAAVVFKPINFQQVNSLLGYHNSDLLLLQFAYCLQQRIE
DNTSLLSFGVNPQPVRIARLQSLQFLVVYNLTDSRFDDKSMLNELCHQLA
DSVPDAMSFKSFSVNFELAFGVAISGENGDDFDEIIDHAGDALLKGLKTQ
QQINYFDNNSISYNQVQLARMEALRRDIKEEKLFCYLKPQVNINNHYIVG
FQLKVHWYEHDSVKPLELSEFSELAEHSGELYFLTKYMLNKAFSTLDSLH
RIGVHQRISVTLSSESLFEVDLVDYIEQQLKQFNIAGKYLMIELSEQVLL
SASHRVKAIIDQLKSLDINISIANFSGSYEALRYVRKMAIHQLKINCQQL
TNDSSNRVDKAITNALVTLTRSMKIPLVGTDIDRHEASEAFIAMGGELIQ
GNIIHPGVVPEEIEIWLEKWYLQHPASIPPEVRPSIY
>CPS_4418 sigma-54 dependent DNA-binding response regulator
MTNATILIADDDEDIRLALNLLLSAQGYQIIEAANAKEIIIESNRQQPDL
VLLDMNFSRDTTSGQEGLAILEQLQPLNIPVILMTAWGSIELAVEGLQKG
ANDFIEKPWNKLKLLNSIKQQLSFSRAKEQNQGYRQLLAGDNKKAWVCLS
ESMQAIETLVAQIAPTDANILILGENGTGKSLLAERIHQLSSRQQAPLIA
VNMAAIPDNLFESELFGHQKGAFTDAKQNRVGRFQLADKGTLFFDEIGSL
PLTLQPKLLRVLETGHYEILGSSQTQVADVRLISATNANLNQLISEQAFR
QDLLYRLNTIVITIPPLRERLEDIPGLANCFITKFSEKYRKQALNISPCA
LSKLKQHNWPGNIREFSHVIERAVLLTSGGEITAQQLLLENADSTNDTVL
LQPLEQAEKQLIEKAMTVTGGQVIEAAKLLDISRNALYRRLEKFAIHHVE
>CPS_1620 sensory box sensor histidine kinase/response regulator
MFKSPENDSLVSAVFDSSPIGIQIIDLETGMREKINQTACVLLGDTKDNL
MAKSVFEDCTWLGKDKFLFVIERLKENKTLKNHIVQFENHQGNELTISYD
ISEFKYRSKRLVTVSMNDVTEQHYLLKNISDTANLIFSDDDTSFFDNVTL
KIAELFEAAHVFIGLNNFDDGLKMKTVSYCCYNQIIENFTYNLKHTPCAN
IVKDINGNACYVYQDVQTLFPKDSFFIEKKIKSYIGMPIFDINKKTIGGL
ILLFTKDINKNTYWEDLLKIFSGKISSELKHLTLHNTHYEAQQHLKLYSE
QAPLALFKWDLGFNLLECNQSAISMLNYTEDELKQCDFISALVPINEQKR
VNKTCSDLLVNEGGEHGFNSLIKQNGNIILTEWHNSLIKDDSGAAIGVIS
IVKDITQERQQLKRLAQKETEKREIINAIIDAVITINSKGIILSVNAATE
KMFGYSVDELLGENIKLLMPKSTAVKHDTYLENYLQTKEAQIIGIGRKVI
AIKKNGQEFPIYLGIAELSPDENNNIRYVGTCHDLSLFTEQQNKLQRIQK
MDALGKLTGGIAHDFNNLLGIVSGFGELLELKLGQDPKLSKYCRQIITAS
ERGSELTRKLLDFSKQESKKSTVCNINDLLTATQGMIAKTLTVLVTVNYT
LADDLWCSTIDISAFDDVILNLCINAKHAMSNGGLLSISTQNVTLSAIEA
ERYNLTAGDFVSLTITDNGCGMNDKVKRQIFEPFYTTKGDEGTGLGLSQV
YGFITSSQGSIYVYSETNMGTSINIYLPRSKPKESKNVLSKNVLSKSKYI
SLKGKENILVVDDEFSLGLLAKTILENEGYTVFQTSSGEDALFCLTAHNI
DLIISDVIMPKTTGYQLIEKVRALDINIPIILATGFDGYINISKGNYSDI
PIISKPYTSYELLTQTRMSLDSKKIEN
>CPS_1804 protein kinase domain protein
MSLLYKLFTEYSSLPKELLAQKMTQLHQQNPTVATELSRLLDYRGTSVNE
MLEYLHLGIINNEDTSIRIGRLINNKYKITKLLGQGGMSDVYLAERTDGL
INHTIAVKYFALADSNNTALKMIKKEAQILADLDHHHIASFIDISHDNHQ
EPNIMMEYIDGITLYEFLNTSPSEEAKEQVNTSLKAAIEHAKSKGVEHGD
LSKNNVLVDINGNANIVDFDIANFSDSTTNDTQPLCV
>CPS_4085 putative granule-associated protein
MFTQLTEQFTTAMKSFNNEDQFSAAMKPFNSLVEINTKTVEQLINQQAAL
ITTIMNDSVAQTKTLSAQTDLATAIESQKVFTEELQAKVSASAKEAYDVV
TRTSEEVTNLVKDSMAEVTTIAK
>CPS_3950 response regulator/GGDEF domain protein
MQHMKVLIVDDDIVDRELIKRTLKRSDISCNITEVESVDDALKNLQDSSF
DAILLDYNLPQRNGIELLLEIKGDPNRHDTAVIMMSTSKEDELALNCINA
GAQDFLVKTEINVFRLQRAIVNAQARSDLEKRLYQSYQRTKELAEHDSLT
GLANRYYFDESLVKDIKSNQREKKILALLLIDLDNFKYVNDNFGHDIGDK
LLIEVVKRISNCLRGNELFARLGGDEFAITLTRLPSINGASIVSQRIINA
LREPFQIDNHWIQSGASIGISTCPWDSSNTKELFKFADIAMYRAKNKGRN
QFSFFEEEMQNEFLEQFKIETQLRSAIMNDDFYLHYQPVIDAKSKTITGV
EALIRWNIDGDMISPDKFIPIAEKSRLIIDIGKWVIQQAIKQLSLWNKNR
SSPLTMAINFSSVQLADEYLFDFIRDCLSQHNVAAHLIEVELTETALIIE
PEKTVKIIQGISDLGCKVSLDDFGTGFSSLSHLHSFPINIVKIDRTLMPN
ASSSEKVKQLLSGLVLMIKSLDLQIVAEGVETESDLNLCVKLGIGKIQGF
YFDKPLSPFDLERKYL
>CPS_2607 GGDEF domain protein
MLLDVKFTKNTCTKLIGLWLKFFLFYSLLPFSTSAQEASFRFKRLGLEDG
LSQISVNGIAQDVNGFIWFATQDGLNKYDGYQITTYRHQPSDPNSIINNH
IHSIFKDSKHNLWIGSYGGLSKYEPKTDNFTHYNSPSLNDSDGKVGYIQS
LFEDSDGELWLSSNMGLYRYSIDTNTYILYLPDDNKPNSVIHSEIKSIAE
DSIGNIWIGTTIGVSKYNKRNNTFTNYQHSPENPHSLSNNFVLKIYKDSQ
NNLWFGTFGGGLDRYDNDTSKFVHHRTNTQNKNSLGNNYIRTILEDSAGM
LWLGTNNGLYAFDSSKLIFQRFRHSVNDRHSLSHDVIYSLFQDKDGSLWA
GTLGGGVNLFRPSTNVFKHYKSNPNNPESLNANMVYAIYDDDEYVWVGTS
GGGLNKLNKTTGKFSNFTEPETSVGLGLNKVNYIIKASEAELWLSTNSDG
LLKYNKNTGNITQYKHHPDDRNSLSNNRARGLAIDKEGNLWIGTAGGGLN
KLDPISGQFTHFMPDTDNPNSISTNFIRCLLYDSKGRLWTGSYGQGLNRF
DFDTQTFINFNKDSVKEPILSNKFIRSIFEDKSGNIWVLTNGGIIKYDES
KGSFHSYTTTDGLPSNVVYGALEDQKNNLWLSTNNGLSKFNPQNITFENY
TKEEGIQENEFNTGSFFKNKTGEMYFGGINGFTLFHPDKIKKDKTIPTVS
FTNLLLYNDAIAIGESERFSSHISSTNALNFAHNDDVITFEFSALSYSQA
NNISYRYQLQGFSDNWIETDHNHRRATFTNLSKGDYILKVKASNRNRSWG
EETTDLRITIAAAYWETTWFRGLLLAIGFIVFVIAIKWREKALNNQNLVL
DIMVKERTKELESSQEYSNKLEKLVQKRTLNLQKANTALEQSSITDALTG
IRNRRFLDQQLSSDWAIQSRNNLPLSILMIDIDYFKKYNDYYGHQQGDEC
LQKIAKEIQSVINRPTDNLCRYGGEEFVVITYNDAEGAKHIAKLILKKLD
ELALVHLTSDKGIVSVSIGLGTMVPSIEVAPARLLKYADDALYQAKNNGR
DQLC
>CPS_3747 response regulator
MNILVVDDNKTVQEKLAALIISQGHNVDLAINGLDALGKAQQGNYQLFVI
DHLMPLMNGVQLTKNLKANQLSSSVPVFFMTTQGSHTLKDLVEFSLFDKI
IDKPINEEQFLTILSEFSGTHFESDTRQANS
>CPS_0851 sigma 54-dependent transcriptional regulator
MKKISSTAVIELALDLATSLNTKDRFDRLLDTVRKTITCDAVALLSYHGD
VLKPIALQGLSRDTLGRRFYVEEHPRFLALCQSKSPIRFAADSPLPDPYD
GLLIDREGDLPVHSCMGLPLYYDDKLLGLLTIDSLTPHDFEDIDVRMLEV
ISAIAAATLNTAFLLDQLESRADHSQRVVAELTEEAWKRDGGELIGESPI
MSQLKQELDIVASSDFNILIYGETGVGKELVARTLHQKSLRQHGPMVYVN
CAALPENLIESELFGHVKGAFTGADRNRAGKFSLADGGTLFLDEIGELPF
GAQSKILRAIQSNEIQPVGQDNVEEVDVRIVAATNRDLKEEVGEGRFRAD
LYHRLSVYPIRVPRLYERVGDVQLLAGYFVEQTRRKLGIAQLKITEQAVA
HLTQYNWPGNVRELEHVVSRATLKARARQRDKAIISIDKIDCGTLNAVGA
ELPIELIAESGLSSIAEQQVNLNLKVETESFQKQLISRILKEEEGNWAAA
ARRLSTDRANLNRIAKRLNIKVVKSII
>CPS_1707 putative protein kinase
MTNKKLQHFYIAQEQSIYLLSHKDATKLKQWVDLCQQQLKQLGFEDVALL
GKGAYGFVFSGIKRKGSSADQLPVVFKFSRINLPQHVQDRLAEEAEIQGQ
LSHPQIPEVIDYQKIKRQSILQMTRAPGIDLEQLSLQVGPLAPELVVSIA
LQLADILLYLRQANNHRQLKPIVHGDIKPSNLVYDKSTGKVQLIDWGSSV
SAQLDCDKQSTSTNVMDLMSSDLQHSNARLGDVYFIGPEQLNGGLSSPRF
DEQGLAATLYALASGQSCRYGVKVIPPNALGLPKLLAQVLTGMLSDDEKL
RAQAGDYFFNNLTYLKQVVLADKPTKINAIAQIPVWVKPQGEQIDTVVYG
SRKSFLREQTGHDSLSNIDDAQLDKYYKNYLMGMGDNEKAFIAALSRLGN
FPVVGGIAIRWAKEGVYIDSNLTLFDEALKTAFTSAVNNIIYLAQGIFRV
GMFKSCLFNARNTLHVERIKENQPFVADETQVIQFEVSDVPDVDDITRLH
SYFEDGKDPDEYLHLPDELMSVLAELNLIHHTGCIIFEVLPKHLKIHSYL
MLLNHEKEAEFTDCLAKVLTLLPTIDGVGISGFMKLPYKDTRFFEHISSM
PDKFYPKNPKL
>CPS_3245 sigma 54-dependent DNA-binding response regulator
MQNLNKSRILFVDDEPEILRSLERITKKLDAVILTASSGQDALDLINECP
VDVIVSDFNMPNMDGNQLLEQVAKISPETVRMVLTGHGDMEMIVNLINNG
HIWGFLQKPWDNFDLIIKLQQALQLQQVLAERTLMRRTIDQYQKYHKSSF
EGFIGDSVAMQFVYSCIEQSAPSNASVFITGPSGAGKEVAAQAIHHLSKK
KNGPFIALNCAAIPSELMESEIFGHIKGAFSGAVSNRDGAASLANGGSLF
LDEIGEMDISLQAKLLRFIQTGCFQKVGSGKEEKVDIRFISATNREPQIA
IAEHKLREDLFYRLNVISIDLPALNERDNDILKLAEHFLRHFSDIEGKVF
AGFSSGAEALIKSYSWPGNVRQLQNIIHSSTVMSEGPLISEKIIAQQLGR
QNKQAEPTSNTNKQSDIPSINQQNQNTSVHQGNHSTSSIITLAEVEKQAI
EKAIDSCQDNIVKAASELGVSPSTLYRKIQQWQTSPAE
>CPS_0913 sensory box sensor/GGDEF/EAL domain protein
MKSLQNKIFLLFVILLLMVQAIAFWTLYSEKKNQEAAEINNRLTTAKTIF
TELFDRRLTYLSTFAETVAKDYGLKEVFNEDTRSLLFALNNHRKRIDADL
AMTISSAGIINGQLQRHFVNGKGKIRQGAERNSAFRFSEWLETGQAAHLY
MIDDALYQLSLSPVTVGAKTLGWIAFGFEIDERLADEFKNITGLNTDFII
KNEGAWQLISVVQSSENNESYDKLLELAVQVIENKAPDQYIATHSLITEF
DDQEFGVAMHGLRANFVALLQEQWWKFLFLAALTLLLSLTSAYFIAGSIS
KPIKRLVAQAKVIASGDYQQKVTLKDNNEIGQLADEFNQMQAAVLQREEA
ITHRADHDPLTDLPNRNKLNKTLKKLIEQQKNFLVLHLNLSRLKDVNDTL
GHDVGDEVIKELASRLHNLCQMNSFNALAHLGADEFILLVEHLKVDEAIY
QLRAELEPIFDYQGISLQLQVRIGVAAYPEHAVDDKSLLQMADTALNSTR
EKRKLVQIYHPDLDVNTVERLSLINDLKQAIPAGELELHFQPKMCLKTKT
VTHAEALVRWQHPTLGMVPPDNFIHIAEQTGQIKALTRWVFITALDQYNA
WQEQGIDLNIAINVSAENLKENDFHHFICQSIMAAKVPAEKITLEVTESS
VVEDPEAAIKLLAEFKDYGMKISIDDYGTGYSSLAQLKQLPVHELKIDKS
FIQHLEHDEDDQIIVRSTIELAHNMGLHVVAEGIEDEFALNWLAAHGCEL
AQGYYISKPKPAMELTPWLLAQLTIQDVEEKV
>CPS_4964 methyl-accepting chemotaxis protein
MNFLRRFTIQKRLFILVVLIIIGLSVLDVMSLSGEYKSLMEQKKHTTEEL
VDSAYSIIEHHYALQQKGELNESKAKEQALSILASMRYDKNNYFWVNDFT
PNMIMHPVKPALNGKNVSGIKDADGKPLFIDMVKVAEAKGHGFVYYKWAK
PGFDEPVDKIGFVKGFTPWQWIIGSGTYLDDIEATFAKQRNMLIIDSLII
AIIIIVLSYVIGKSILLPTKSAAELMKDIAQGDGDLTNYLDDTGHDEISR
LSNYFNNFTGKMRQSLQDVSNNTAQVLDHAQAVSGASDTAQALIHNQNDI
TTQVATAMEEMTSQIKEVSDNASSAEQAANDARNNTTDGKKIISSTITQM
QSLSANIDEVSQVVASLASESNNIGSVLDVIRGIAEQTNLLALNAAIEAA
RAGEQGRGFAVVADEVRTLANRTEQSTNEIQQMIQRLQTGAQAAVSAVKV
SQDISLQTVAQTGKADDSLSEIDRLMQVISDMNTQIARATEQQSLAADEV
NLRINDLASMTDESLATTQQLSETSQQLKVSSNNMSEVVGRFKIA
>CPS_0674 sensory box/GGDEF/EAL domain protein
MFSYMDTSSFIALLYNAALLISLGVIYDALKLESIKNKKLRDLISGLLVG
MLGLAVMNTSWEMAPGMFFDTRWVLISLCGLFFGLVPTLIAGAMMVSLRL
HIGGAGILVGSLCVIIPGSIGCLFAIILKRKNLKLDWFKLYSFGMLIQIT
VLGCMLLMPEHLRYKVIGAVIQPVIVVFPVCTMLVGLILRRQRDRRKSEY
DLTESQKLLNREQSLMRGLIGSLPDLISFKDVQGRYLGCNHAFEQFVGLT
EQELKGKMDQELKGNFKPSDIAGLDEQEIIASGKVYSQDEWVVYPDGSKV
LHETIKKTFDGFDGTRYGLMSVSRDITERKNHEDQIQRLAFYDSLTQLPN
RRMLQDRLQLLVTTSARDERFNALFFIDLDHFKTLNDTQGHNMGDQLLIA
VAARIQDSVRDEDIVARLGGDEFVALISNLGEDEATAGHVAEKVAEKIRL
SICQPYKLSIKENVDANNEMIFHCTPSIGISLFKSNLTSPDEILKQADVA
MYQAKAAGRNAIRFFDPAMQIALEENAAMLAELHQAIDNGELELFYQIQI
DETKGIQGAEVLLRWFHPIRGMVSPLDFIPMAEESGLIIPIGRWVLESAC
HQLKVWENIPNRENWQISVNVSALQFQQENFVEIVQEIILSNNINPHGLK
LELTESMVLDNVDIIIEKMHQLNQLGIDFSMDDFGTGYSSLSCLKRLPLK
QLKIDQSFVRDITTDPDDAAIVQTIINLSNSLKYDVIAEGVETQEQRQFL
FNNGCSQYQGYLFSRPVPIAEFEELVSSMSVNFAAALD
>CPS_3065 DNA-binding response regulator
MFLLPTTVLNEKMHILIIEDDKEIARLTEIYLQSTGYETTIIADGSLAIA
MIKKLSPDLILLDLMLPGVDGFELCKQAREFYNGPIIVLTAMEDDLSEVS
LLKLGADDYLRKPAKPHIMSARIEALLRRAKVNNEKVTQELPNKLLINRD
TLSVTLNNALVDLTNSEFDMLVLLADKSGQTVSREECIHSLRGIDFDVTN
RSIDMRISALRKKLNDEKSPYKLIKTIRNKGYLLVNE
>CPS_2661 hypothetical protein
MNHYQIIVLLLFILVSFYLKLNNSKKDRIKTQRQGLLNIKGLKQLIYLIQ
QHRGMTAAYLNGKKEILPKITIIRQCIQENINKNKLTFSNDNERWQSFLD
HWQRLGTASVGASADNSFDQHTQLIRNLLYLLEDEAEKGLLFSQFLPQFP
QAGYVWREVIGVTEVVGQARAIGVGVATQKTCSSTDSIRLSYLQQQISEV
IKTVLHQLYCLPQYLDEHNRLIKITQEQTEMFLSTVDQAFLSADKITLDQ
QVYFEQASLLIQSIDDVFKHQLMQISNSLDVN
>CPS_1866 sensor histidine kinase
MNNAKPMSSKIIRVYLLGAMVLLVFYGAIFYHTVLYTENQSSERRLALIS
PYHFKLFGQGFDGEIQIDPMLKIYDQYDILPSSIKRRLNKNWQGSISFHF
EDDSEYSVFAQQVMTNKGLAIVYALEDVDAIEWDDTEFAIFQTVIFGLGL
LIYIIAALFIIKMAKRISTPFSTLANKLESHDNEKYTPLSIQGELSLELV
QMLTSINSYRSRIRDAFMREQAFTRYVSHELRTPMTVIRGGISILRRLDD
EKVKKQSSRIDNAVIEMEQLIHTFLLMARNEDSDTINVDISDEFIQQIVQ
DFESTIKANQVSFHQELQCNFSLNVQPLLFAAVIKNLLKNAINCSVEGNV
SLFISPQRIDVIDNGVGLDAKPRGYEGFGIGLNIVRDICEKYHWQFNIKN
NQGDGCTASVIFNQESAVSEL
>CPS_2524 DNA-binding response regulator
MNNQSLYILVVEDQQSIAQNIANYMEDKGHVLDFATQGDQGLELALTNHY
DLVILDLNLPVMDGLEVCKKLRKQARHHVPIIMLTARDSIDDKISGFTLG
ADDYLTKPFSLEELEVRCFALSRRHLLQTNDTLIFDQLCIDRKRQQVTRS
GQNLELHTMGYRILTILAEAYPQVVSRSKLSQKLWGDEPTESDALRSHIY
QLRNMLDKPFDYPMIKTMHGIGFLLNVESHVKSDVINNDK
>CPS_0546 GGDEF domain protein
MNKNILTFFIIISFFTTANASADFDAKLSLADSIRSSKPQEFSVIIKGLN
QEKSKLSTAQYQHLKYLNTYSLMFQGKLDEAIYLAKEIIISDANETLKFR
AKISLMNIFANRQNWTEGLTNLSSLLKDLPSVKNEDFHQLALVAASMFYN
QLGQYQLALSYAKKIEARAGQNRNQCLAKGFIVEALSKSHQLSTNDPIIE
QAIEVCRKNNEILMVSFINSHIVRTYIYNEQFIKAIELLNATLQSTVNIN
FSRITAEYYSLLANAYWQTNELAKAQYFALKTLESKNQLSSRKAKILANH
LLYKIYKHQNNLELALSYFEVYSELGKEHLKGEKAKHFAFQLAEHQNIEQ
ESKIKLLNEKNSLLLSDQALSKAKVVNIQLMISILMVTLALLVLWGARLL
KAHKRVRELAEYDPLTGIYNRGHFTHVTNSALKYCKNAQQDLSVIMFDLD
HFKKVNDSFGHACGDWALKETIKVCQRIGRKNDIFARLGGEEFCLVLTCC
TIDVAMLRAEACRAAIEEIITEESGNDFSITASFGVTDIKRSGFTLDKLL
ADADMAAYASKNAGRNRVTLFEVPYTAKANKLDDSWNYN
>CPS_0394 response regulator/GGDEF/EAL domain protein
MQASENSHDDFLFIDDSDEDEILAFGSNETWQVLIVDDDPEIHSVTQLAL
SDLVVLGRRLEYLHAYSGKDACQLIENNDDIVLVLLDVVMETDDAGLNVV
KYIRETLQRKDIRIVLRTGQPGYAPEESVIKEYDINDYKTKTELTRRKLV
TTVFAAIRSFQQIATVNENRQGLEKIVSGATELSSQHSLPTFSQSVLSQL
RTLISDDISAVFCARGQGIIDNIDDLSFYVLAQIGFDDSLLNQKIDTLQD
NQANKQVKACFLQQKHQYLDDSLDLYVAKGDYRAVIHVRLSSPLTEIQTQ
LLNVFLTGVAVGYENVHLFQKLTNAAYRDWLTNLPNRLEFVRLLDSFAQN
DCKNTVAALIDINHFSDINDALGQDIGNKLLSAVGQRIQSIGSDCQLARV
GADVFGIIGPADCLTPESLIALFHQPFAAGEQHLPINACFGLCTKEHAQS
SGVQVLNQINIALNIAKKNRLEHFAYYHSDIEDQMQWRLNMIRQLRNDFG
NNCLELWYQPQLSLTTGKVIGAEALLRWRTADGKFVSPAVFIPLAEYSGL
IIEIGDWVISQACKQLKVLEENFSDLSISVNVSIPQFRQDNFVDNIINTM
TQYGIKPNKLELEITENILMDEPQIIIDALTKLKAQGISIALDDFGTGFS
SLSYLQKLPLNRLKVDRAFVTDINKEGQSVIAETIINLGKKMQLKVIAEG
IEEIEQQERLIELGCDEVQGFYYAKPMPADEFINFLHQQS
>CPS_0179 DNA-binding response regulator, LuxR family
MIQPEKIIIADDHPLFRQALLGTLKAKLTYTVWLEAQTIEELEQQLTNNN
DSDLLLLDLNIPGAHGFNTLIHVRNHFPQIPVVIVSAHEDHDTISKAMSY
GAAGFVPKSTPVDDIYSAIVAVLSGDTWLPASFEQKQRDNSDGDIAERVA
SLTQQQYRILMMFAQGMLNKQIAYDLNVSEATIKAHATAIFRKLDVRNRT
QAVIAIAQLSLTETGFKQG
>CPS_1203 conserved hypothetical protein
MATENALYEILTEKIKQDTLVLPTLPEVALKVRSAADDPDINLNQMSDII
AHDPALSLGMLKVANNALMGRSIKVETVPQAVTRIGLIQIKSIATAMAIE
QVFVSNNDVVAMYMNKAWVKTIDIASVAISLMNIYLKENKHTSLSLDTIT
LASLIHNIGVLPILTEAENHPDVFANPTFLQQAIIKLSGRVGGAITRKWG
FSEEFTLLAESWSDLTILPSEVHYLDFIRAGAIYHNVFKNESTKVALLNN
YTKKGILPEVDYMDSDEFKGMCEDVRAMFI
>CPS_4495 sensory box sensor histidine kinase
MVDEHENKTIASETRAWANILAKNSRQFLESDNDNSQTALSSELKKLIST
PLINRIHVYRLNEDSSIEYFSSYNKNHNFPAISDKIAHISQLSTIQFEEN
HLELIVKVSQGQHTLGYLFIQSSLLEKQSFIKKLTYIMVSFLLFFLIIAF
GVSQWLFNKTNHPIVKLIEDVGQISQSKNFTLKLANQPYKELDILAKNIN
VLLLRTDKHITRIIDEHQHALSQNQALENRLSARTDALKESNQELLSTLE
KLHEFQGQLVETEKMASLGDMVAGIAHEVNTPIGLGVTASSLLADKLNEI
KASFEDKTLKSSQLKKFLTDGVENVSIIFRNLERAAKLISSFKKVAVDQS
SAESSTFNVHDLLDEVLLTLSAKLMSTNVTVSVICPEDLNIKSKPGPINQ
ILINLILNSIYHAFEGLEQGTITINVMNLSDQLHINYSDDGLGIDDSVKA
KIFDPFTTTKRGSGGSGLGMHLVYNLVTQALDGHIVLDNEPEHGVCFDIT
FPVELAAT
>CPS_1875 sigma-54 dependent transcriptional regulator
MVHQTIQAIIEAVEKPAIFITHDYSIEAVNQAYRDTYTTEVMLGKSKCYG
VSHNFTKPCDQKGEACPLSSCKETGKNSSALHIHKTGSGDIYCNILMKPV
KDNNGMTIGFLEILEKVDFASSVSSDLKLIGKSEPFQELLKMITRSAKSN
ISILLQGETGTGKELAALSIHQASKRADQPFIEVECTGLNESLFESELFG
HEKGAFTGANTSKKGLVCMANGGTLFLDEIGDVPLNLQVKLLRLLETGHY
RRVGSVEKQMANFRLICASHKNLEKMVEDGEFREDLYYRIAAFPISLPTL
RQRKSDVSLLAEHLLSKSEFSSKKFTSEALVALSHYHYPGNVRELKNIVQ
RSALLSDDDLISIEHLPKNLVGLNEIETHSSNLLSNEKEHITKLLNQYGN
QPKTIADNLEVSVRTLYRKLQKHQLNIKDFSSTK
>CPS_3485 conserved hypothetical protein
MSIFQHYQTRYEQAQQEEFGLQEFLTICKEDNLAYASASERLLTAIGEAE
MVDTATDPRLSRIFSNRVIKRYPAFADFYGMEEAIEQIVSYLKHASQGLE
EHKQILYLLGPVGGGKSSLAEKLKSLMQQEPIYVLSANGVRSPVNDHPFC
LFDAHSDGKILKEEYNIPGRYLNNIISPWAAKRLHEFKGDIAQFKVVKVY
PSILDQIAIAKTEPGDDNNQDISALVGKVDIRQLEHFAQNDADAYSYSGA
LCRANQGLMEFVEMFKAPIKVLHPLLTATQEGNYNPTEGLSALPFNGILL
AHSNESEWQTFRNNKNNEAFLDRVYIVKVPYCMRVSEEVNIYKKLLEHSE
LKTAQCAPDTLDILAQFSVLSRLKDPVNSSIYSKMRVYDGETLKDTDPKA
KSYQEYRDYAGIDEGMSGLSTRFAFKILSRVFNFDSVEVAANPVHLFYVL
EQQVEREQLPKEIAERYLEFIKDYLTPEYIAFIGKEIQTAYLESYSEYGQ
NIFDRYVTYADFWIQDQEYRDAETGQLFDRQSLNDELEKIEKPAGISNPK
DFRNEIVNFVLRAKANNNGKNPAWTSYEKLRTVIEKKMFSNTEDLLPVIS
FNAKTSTDDQQKHDDFVKRMMTKGYTRKQVRLLSEWYLRVRKSS
>CPS_1794 protein kinase domain protein
MNDLYALFQKLALIEKPLQSNCFSQLENESPKKAQQLAQLLKQRNVSTGV
LIEKIFSPLTFLDKPELRLGRIIDNKYKIVELIGQGGMSDVYKAIRCDGL
IEHIVAVKYFSLADTFETALQMIKKEAQILAQLDHHYIASFIDIGYDDNG
EPNIMMEYVQGQTLFAFLKTKPDETVLSQVYATLDEAKGYVVKQGVTHGD
ISLNNVLVDKNGNANIIDFDIAQYKTQ
>CPS_4419 sensor histidine kinase
MKFSHEQWLIFGLATTLIVILALTIALTYTLAWSKLATVTLVFFLSYPLI
WLAWRSYNFWKQAIMQLTTYTQVVREGETNLRFKVQHQDNLLAELQQEIS
ALALGNAHKLQQNQTLENVLSHILDSWPIPVCLFDENNQLSYRNIAMKEK
IQQPMLIGTTAEDLGFVIENGNLTHSQFNQQWQCQSISYLFQQKKCHIFS
ALDISQPLHQQQSITQQNLIRVLAHELRNSLTPMASMADTLLCNDSFNED
QVRLVLSRIRQRSNRLLSFIEQYSQLSQLPAPQSSWFEFNDLLEEAKSMI
TEPCTINYQGSNQCFADEQQMAQILINIFKNAQEACDEEHCEIDVSLYYR
QENSQGYQQTKQVIDIRDNGPGFANLDNALTPFYTTKSHGSGIGLSLCAE
ITRNHGGEFTLENTEHGARIRMAWPVDNKAH
>CPS_3015 phosphotyrosine protein phosphatase
MNYKDISSILFVCMGNICRSPSAEAVFRHKMQAKGLALKVDSAGTVGAHA
KQKPDHRAQKAGVARGYSFDGIKARKVTVQDFTDFDLILAMDYDNVEELK
KVAPPAMHDKIQLMLNFASEHEEDQVPDPYYGGAKGFDYVLDLVEAASDG
LLEKI
>CPS_1933 sensory box/GGDEF/EAL domain protein
MKSSKAEKELTHQYVLNDSLHQLFDAVNIVSVQGYDEQRRVIYWNVGSEL
LYGYTQKEALGQKLEDLIIPKPMREIVIGAHSDWIKKGIEIPASEITLCH
KNGNDVNVFSSHALFTNQYNKKQMYCIDVNLADVKHAQSQALFKEHMLET
IFNAIPDLFFLMEVDGMIVDYHTGDQKNLYVAPHQFIGKRMTDLLPQEVV
SKFQTHVDKILQQEGMITFEYELTMPHGLVHFEARMSYLPEYNQIVLIIR
DISEQYKSAEIIRHQAYFDTLTSLPNRFLALDRLSQMLTEAERNNEKIAV
LFLDLDDFKKINDSLGHEIGDKVLIQSAHRLKQVLREGDTVGRLGGDEFI
VLLRGVTENHDALVITENLLKSFREPFVIDGRELMLTLSIGVAISPENGR
CASDLLRNADTAMYKAKDLGRNTYSFFSKKMNTMMLRRFEVEEQMHGALE
RNEFELYYQPQFDVKKQKITGVEALLRWHNSVLGNVTPDEFIPIAEHTGL
IIPIGRFVIKQALGFLNKWQNIHQQKFTMAVNLSPCQFRDSTLLGFIKDS
LSETNVIAEHLELEITEGVLMSGQSHIHDALVEISELGIKLSMDDFGTGY
SSLSYLRQYAFDVLKIDQSFIRGIPLNKADCELVNTIIAMAHSLGLTVVA
EGVETKEQLTLLEELGCDLVQGYYFSKPIPAKQLLDFSVHYK
>CPS_1920 sigma-54 dependent transcriptional regulator
MLEKTLLKIALDLSLSLPKKAHYQRLMLAVNEVMPCDAVALLVLQDDYLV
PVAVDGLSPEVLGMRFSPEEHPRLKAILSSRKPIRFDADSSYPDPYDGLL
SIDPKRVLDVHDCMGCCLYVEENLVGVLTLDALQVGAFSNVDDITVATLA
ALAAATIRNANCIAVLEKRNEKALCLTNELVKDAHKAKGDDFVGESPKML
ELKNEIKVVANSELSVLITGETGVGKEVVARTVHAQSRRSEEAIVQINCA
ALSENIAESELFGHVKGSFTGANKDRMGKFELANHGTLFLDEIGELSLNL
QAKLLRAIQEGEIQRVGADKNFYVDVRIIAATNRDLSKEVAQGRFREDLY
HRLSVFPLNVPSLRERIDDIPQLSGFILNNIKGKIGTNNVRVSKTAMHQL
MQYDWPGNVRELQHVLMRAALRAAASAEGKVAVIELKHLGSDFVADSAVE
SGSITPVISTDNKSFNEILSDFQRQLITQAMEDNDHVWAKAARQLQLDRG
NLYRQAKRLGLT
>CPS_4398 conserved hypothetical protein
MTADDYVEQASEIFVLSDSFIRIRELIDDESSTIDDISEVILLDPALSGT
VLKLANSPFFSYPGKIDTISKAVLVLGITEVYNLVIAYFTTEAFKNIDAN
QDYLDEFWIKSVDCALLMKFLGTSLGIINAERLFILGLLHNLGELVVHQI
TTEKQRACDSQDINLLPWVKQQDVLGFTFGECSAELLKQWQLPYSIFAPI
RDQDIDDLSQYTAETQLLYIAKRVMSKQQVFKDQNLDFNDLLTEEQLEPI
RLDKKMLENAVDYCDLERLGLLSILNPSACMLY
>CPS_3569 sensory box sensor/GGDEF/EAL domain protein
MFQNFACHFSIRARLKTFLLLPWLIILCFGLNHTSEYLEDIKLARKAILS
IEISSEIDDLIHELQKERGLSAGVIDRNSKKKLVQLQKQRLQTDSRIEHT
IEFIQRIELTQLELNTIASQQVINDVLKDIFVSIKGLSKARRKIDNSESQ
DYFAYYSQFNEDLLRLISQVQVHLKSTEQNRDSIDFLNLLRLEEKSGQER
GALNAFLNTKQLYASQLQQVISYGNAQTELISDLFSVSKSHHQLWLQRQL
NSENNQQVLLIRDLLNERLIRAEQLAQLEREIGYGGLIHDFKNYVLRGET
NYFDSFLTRLSSSQNYLTTFNDIANLTNDEKQAVDIIGQTLNRYHQHILL
AKMSRDKGRHAEQIDDEIRIDDSQAVAAIKKLQQNDVGIDTEQWWHLSSL
RIDEFRAISNHILSEMQNLASHEEQQAIDSLVLYITTFILVFITTLYLSF
LAVRRIVAKIKYISTAMTTMEVEHKFNQPLKVKGKDEISDMVIAFNQMLA
ERIKSEGEQRISAAVFKYASEAIMITNAENRIETVNPAFCHISGFSIEEV
LGKSPNILNSGKHDNHFYQKMWQSLEQDNSWQGEIWNKRKNGEIYPEFLA
ISVVRDQDKKPLQYISLFSDITKHKKYEEDIWLQANYDSLTGLPNRGLCV
ERLHNKLKGDKAEDSEVALLFIDLDRFKFVNDTWGHSSGDELLKLAAIRL
RNCIREKDTVARFGGDEFVVLLVGLSNRFAIERVVKNILTSLSMPFHLRN
NNEAVVSASIGVTIGPVDGDNVELLLKNADTAMYQAKAAGRNTFQFFTKS
MNETVSRRMHIEQALRQAIKRQEFVLHYQPVVSLDTGEIIGAEALIRWQH
PDKGLIYPDSFIEIAEEAGLIEPIGQWVIEQACTDLRYWHDLGLKIQVAV
NVSSRQCKQTSQTPIKDIIKKALKVNNISPSSLKVEITESSLMDNSEEMM
TTLQDIRSLGVAIYMDDFGTGYSSLSYLKHFPIDVMKIDRSFIAGSIDDK
TDASLVEAVVLIGHSLSLKLVGEGIETKQHYDYLRSLGCDYGQGYFISKP
IASKALITLCQQVGNPPKWLD
>CPS_2879 GGDEF domain protein
MQTAKNPQKSKELYAAISLIFLSLLILVLLFLNIDKHKVINLNAADIKVV
DDREVLGASVAKVVKTNHGLEFTCQITKSHLAQPYCELIINLQDLSKQSP
FTGLDLSNYEQIGLWIKHNHPTQPGTRIELRNFNTNYSVKGNETILKPNS
VEYLEAYVTNPIWLKSSDFSIPRWWNNSHNLTLNNGGTDFSNIYSIAITP
TLQVQPGKYELTVERIELKGKYIGTTTLVAVLIMLWSIALGYVIRRLVPA
KKLEVEIPEQASHTIEFGAMSCPLTGALNRIGLRKCFDQLAPTDLQKLSI
IFLNIDYFEDLYPNYGHKTADKILQQFVNEVDNTCRSSDTVARWNSEEFL
LVCPDTELSQAIDVADKIRARIQKATWPNDIKITCSSAVAQMYDEDLNDL
ITRANKALYKAKNTGSNKTAA
>CPS_4173 diguanylate cyclase (GGDEF) domain protein
MPHASQIVISISLFLMSMVAVAQKTIDIKKFNLVAEQVTELKKTDLVLSL
KQLTTFENVLSALTVEQNLVYFKLLAEIQIEQNRYSAAKKTANEGLIIGR
RLASPSILMSELLYLRGFSFESLGNIPRATKEYKKGLEVAESLHNKIQVA
LGLINLGAIAYLTDNYKRSLVLLNDAYNIAGQTDDEELKGTANTELGILY
SLLRQGDQSMAYYQQSYKHFKKAGLLLSAHNSLHNIAITHIREKRYEQAI
TVFKTIIAESNKDTSSDSMFTVYSGMAWAHLKKKDSNIDAAHQYLLLAKQ
YLQFTEKVDYRLQFYFDEASVLYKLERFDEVLISIARIEKILVNHEDMPK
RKRKGYVNIINLKAKVFYKQEKFKQAYETKSRVIALTEKLYENEDNRSIA
QVRLKLEAEQADKQNEILNNQKSRYEASFNEAKLENEEQRIYLIISALLA
LAFAWVLVKLIQSQKKLKVALNVDKLTGTANRRRLMVKSQQAFELAKVKQ
YHLSLMMINIDHFKGINDSLGHSIGDEVLAKVAFIGANMVRKNDVFGRFS
GGEFMVCLPKTNLKLAMETAECIRAAINEHTWQLNNIEKISVSIGVATLT
DDSELISLVKRAEEQLYQAKASGKNKVCAQ
>CPS_3420 DNA-binding response regulator, LuxR family
MFDNMKIILADDHPLFRQALTITLKSHFTSAVIVDAQNIPELELHLQSEE
KADLLLLDLDIPGAHGFNSLISIRRSHPDLGIVVISGFEDKETIHKAMSF
GAAGFIPKSTPVPQMLVAIKEVLNGTLWTPDGEFNPNEKVNNIDDKIASL
TPKQHEILLMFADGLLNKQIASQLGTSESTIKSHASIIFLKLGVRNRTQA
VITLNELQLNQSTFGQ
>CPS_1949 sensory box/GGDEF domain protein
MVKITNNVHQFGYEPAEFLSKKLTFTDIVHPEDLDRIVKEMVAFLKNDIV
YFEQDYRIFTKGGDIRWVYEKTILKTDDTGLPTLAKGYLLDITERKLAEQ
QLRESSEKYYQLFDKNKAIELLIDPNTQKIIKANGAAEIFYGYNEQEFKN
LSISDINILSVDKIEAEIELALTEKRDYFNFRHQLKNGEIKDVCVYSGPI
IMAGRKVLYSIIHDITDQRQAEKALLESEQKFRSFIETTSEGFLILTPQL
DINFSNTAICQLAGYSLTEMQGKSVLVFVTSESRKQLRQQLIMARSHSHL
AAELTLMHKNGHHVFIRYKATVMADGNGFFTYITDITERKLKEVELRTLN
SAVKHSASSIIITDKNGIIEYVNPRFCVVTGYSEQEVIGQTPSLISTAKT
RTELHTELWKTILAGDDWHGETYNCTKNGEFYWSMMSISPIRNENGEISQ
FVSVSQDITEHKSKHLKMEELALRDPLTGLANRRLFDDRLNQAIQIISYQ
NRNGIGIIMLDLDHFKDINDTYGHDVGDLILKEVARKLLLSTRKEDTVSR
FGGDEFIILLQDVSKVSDAQRVAANILKTLSEPIDVGEHTFSITCSLGVC
LAPQDGCIPTQLLKAADLALYQAKIAGRNNIQFYNTGMQQLSESNKHSEQ
LISS
>CPS_1015 DNA-binding response regulator
MASSIELVENIQPLETKNDNQIQQKLLLIENDQYLSKAFLVNGEQSVYHT
TKMRTGEVLSQELKSYLVDHRPSMIVLDVGFSDSAQLLIIRDLRALFDGL
LVIVSSKNSEKEQVEAFKLGVDDYLLKPIDSRILMMRIEALFRRQRHKIN
QVELASLTMGDVCLQPKSQKCFINGEVVKLTTFEFNLLKSLVEHQGKILS
RDQLYSTLLRRVYNGVERTLDVRMSQLREKLTIAGMKNNQIETVWGQGYM
FNNIAS
>CPS_3214 putative transcriptional regulator
MQCFQHDNSMLIISNDSFIIGLLTGYCVANHFTLKCIPHSKPLYTNGDHP
KFNLIIIDLRELTPSLIEDHLESLNNIHHQYSIPICAIHNRNRMPLHRLL
PWLNYYKDETFIEKLDDYINKYIINFTHVFDERRNYNRRLGDDRRTILGT
INSFSSKQLNGTAKLLNPDVELELLGLFKIDKDCQNVYLKGKNLELTTKE
FKLFKLLAEEPERVCTTEKLITHLWPNRGRANKSDLYQYMHLLRKKVELD
PDNPHWIITIKGVGYKLHI
>CPS_4164 response regulator/phosphatase
MTLSKHEVVDGDKATVLIVDDNSDNLDVLSGVLRPFYKVKAAINGELALK
VASAKNKPDIILLDIMMPGMDGYEVCQQLKLNPSTANIPVIFVTAKTETK
DEEAGFKLGAVDYITKPISVPIVLARVRAQLALYNQQRELEILVKQRTKE
LDDTRLEIIQRLGCAAEYKDNETGLHVIRMSWYSKFLAEQVQANDEWVEL
LYNAAPMHDIGKIAIPDRVLLKPGKLDKEEWTIMQTHVECGVEILGEHES
DLMIMAREIALCHHEKYDGSGYPNGISGEDIPLSARIVAIADVFDALTSV
RPYKNAWSVEKAIALLVEETGKHFDPVLVPEFIKCLPRVLEIKDKYMDVF
DE
>CPS_4260 sensor histidine kinase/response regulator
MFLQQKLSRTFFSAITSILLVLLIGIYWYSVPLINKEVYKIEKNASRLVL
NNVFELASTMQLNLKPQKEEVVHRLRQIIKNSVIAKTGYLFIFDEQGNML
HHPNPNINGTNALQLKDPKTGKPILQELIAVADTGKELEYLWDKPSDANN
YSYSKLSLVRHLPELGWYICSSVYIDELQSSGKLLSQRILTMGFITFMCA
IFLALIFSYWVTKPINTLALIARKVSQGDLTVTSGISRTDELGILGKAFD
DMVEQMRENIEMLDLKVASRTQTLATTNAQLQQALSESQQAQQQLAQVQH
INAVGQLAGGLAHDFNNILTIILGNLLAAQQDNENNRPLLLRLLPAIKAS
RKGSDITNRLLAFSRRQYLVPCRVNIKALIDETIELLKGSLPSKITINID
YSCDNLQVYVDANQLENCLINLVLNAKDAMPNGGIITIIVNKRVVNEFLQ
FDEEVTFGDYLDVTITDDGNGFSEQAINKAFEPFFTTKDTHQGSGLGLSM
VFGFIKQSQGYIRIANQQNGGAKISLLLPLLTYEEENNSKAILHDDTRIT
KETGFSNKLILLVEDDHDVRAIIREQLISFGLNVIEANDSDEAEQLIDTI
NDLYGMVSDISMPGNKDGFELATLLKSRSPNCKIVLMSGYFQQQQKPNKD
TPILLKKPFVASKLFQALQ
>CPS_4481 sensor histidine kinase/response regulator
MSFKYLMMQRLTQIILLFFLLTVASLTTVDKTWAQDSQLTKKLIEINKKA
DKKAALEALLNLYKSAELDSGEKAEVSLNQGKVLFTLHQYDQGIDAVNNA
IELAHESNHFSLKAQAHKMLGILYYYQGELKSALKAYQASLVYYQTNQAD
DINNFAIERANLFNNVALVYTYLGESDLALVNYQFAESLYTQYGDEADQI
DVRYNIASLLISLRRYDSAIDMLKVIIDKRIQLNDSYGIASARADIGIAY
KHSGQFKLGKENILAALTYFQKHDYTHDIASQLHNMSEIYNDTFDVEQAI
LYAQQALIVSKEVGHQKAYAGSLQSLAKAYFYSGDLVQAEQYIERSIAVG
QKIDYQTLLTENLSISSLISASQQQFIKALSEHQRYEKSYLITSNNMLND
KLAEFESEQLSQKIVDLEQRRKLQILQSAKVEQQRNIIILTLILVLVVAF
FIYRRYLEKRLTQELELRVKQRTHELEDLTIELEKANQVKSQFLANMSHE
IRTPLTAIVGHAEAIIHDDIDKDKVHEDIEVIHGNSLHLLELINDILDLS
RIEANKFELEVQPLDLAELIQDLSHTFTSQAQQKQLDFTIEHQLPAPFII
HIDSLRLKQILLNLCANAIKFTESGQVMLSITQQKEELVFTVTDTGIGLS
EEHLAQVFEIFTQADNSISRRFGGSGLGLTLSNQLAKLMLGNIEVTSELG
KGSCFCLTLPYQHDTDDSVNTLTDLPPVECSEIFFSGKILLAEDHDDNRR
LIARLLTSLGLEVIVARNGKEAVKLCVEHQPDLVLLDIQMPEMDGVEAFK
ALRALGCNQPIYALTANAMSHEVSQYLGLGFTGHLKKPIERKLFIATIAK
YFTAHNEKILFTDQKNKSAEHALTANEVVNKVDKSLSQVDLSDLVAEFKA
NLSNDKRDLILYSDNDDIKKISYLAHRLAGAAQMFGFVELNQAAKELETI
IKRESMTDKPAHLLIGELTHCLIDEINLIEQQ
>CPS_1854 DNA-binding response regulator
MILLIENDMQYAESIGNFLAEHNTELDYAFNGISAFELASLNKYDVIIIS
YEIVKLHSLTLCHRIRNELFVSTPIIFLGEKHDTQNKIAAFKAGADDFIN
KPISYEELHCRIKALSLRGPRRDIGKQTVAKLQIDYNLRTVTCDETTVKL
HFLQMNILKVLVQHYPNTVSRQMLEQEIWGEESPASSPLRTHIYRLRMAM
EKPFRQPIIDTVYGQGYHLAHPF
>CPS_3169 conserved hypothetical protein
MIKNCAGHLATDFSSTNVLLHELQLGEQLNESVEQTRRADFSLMLAMLAE
DVREQSQFLLPKTKEVTPADLSTVALRKQFNLPDEAALALTTLDDVNQFN
QAHTIVGNDLANIHLTNAMMPKPLAFRDDKKHIESQVLENTSLFTQLKHK
QAAELSRAHNNQLQEEQLNSATIETDKPLSQSLNFNAKAWLDGIQQSLVK
APLLN
>CPS_3923 sensory box/GGDEF domain protein
MILPEYNETDFMQAVINAAPTPIFYKDAQGRYLGCNKAFEEYIGLNREQL
IGKSVLELFDDELARTYFEADNALFERKGTQIYEAKVEYADGTTHDVMFH
KAYFHAEGIEGIVGSILDITERKKAEKSLEQLALSDSLTGLDNRYSLMKS
LKHSLLRQHRENFTLAFLMLDLDGFKQINDNYGHPVGDALLIEVANKLKN
HFRESDVIARVGGDEFSVILENIHSTESLIVLANNILAEFLKPFVIDNNK
FTIGISIGIATSSFSECSSEDIIKHADAALYQVKNSGKGSYHLTVVN
>CPS_4165 sensory box histidine kinase/response regulator
MIKLNKSSFIVFFFLQSFFLQNGMAENLPTDLVTWAHANPVVHIGVDGTF
PPFDYIDEQGVTAGAGKLIRQQLSAILPVDLQETSVSDFRLEYDDMLRGN
IDAISVCGNIEQRRDEVLFTKPFLQMTPIVVVNKNSDIKSEMDITSELKI
ASIAGYADANFAKQLSVNSKGLSSNLQGYQSIESGKYDVFITYLYLYKYM
LKKHDFKNIKPIAISQFESLPIGFCVNKNKPQLVGLLNWGIDQLGDDFIL
AMQSKWAESSLDEGQNSRAHIDKSISLTSVFIYAVIFVLLALFFARKFAS
TIAIKLDTLAFRTTYFTVLILIISLSTGGIYLFLNDFKDQLLIDQKETFN
VTRDVTKKTLAGWYRERELLAHNIAKSKSFKRLVNQLVIASEIDDTIKLA
QAKKALRVYFSKRPYTTQGGRAYTITDVQGRYLLNLVQSAEGKKSPIISQ
RPELFNEVLMGRTEFIPPVWANVNIDGNRNAEDKDAEVFIATPVRNEQQE
IIAVLGFRFDPDREFSQLFIDGRLGKSFESFAVDSRGYMISSSRFTSELQ
QKGIVPAGESTVLNVRLQNPETNPIVQAAKFKLNGQNLHGYTNYRGKTVV
GQWISLKNSNITVVSEIELSEMLAEYYDVRNLLLIGLIISSAFILSISIF
MITISNRANDISRRSQQELAEQVTIRTKELAASEQKSKLINSSVADGILG
VDKLGHFIFANESATKITGYSEEQILSSDLISLFAGDNKENLTFEDTEVY
KAIQSKEVIRISNEYVLMSGARELPLEYSISPVEDDESELACVIALQDIT
LRVQETERLEKMLEHLPVCMVIMNQNDEVEQINQTGIELLGFERDEIVGN
PVDLFIPQEQVESHKALLKKFFQEETVIDTRSLERDFKVKHKSGKLIEIQ
AVYTPVHFHNGLYAAVMVRDITLDRQAEFALLEAKRISDDASKAKSDFLA
NMSHEIRTPMNAIMGMSHLALGCELDRKPKNYVTKVYKAAESLLGIINDI
LDFSKIEAGKLDIEVIEFSLHDTFADLANIIGLKAGEKNLELLFDISPDV
PVNLKGDPLRLNQILINLAGNAVKFTEQGQVVISVNVVTNVSTSHCDDIN
LEFSVKDSGIGMDDEQQKKLFQSFSQADSSTTRKYGGTGLGLTISKKLVE
LMNGQIWLESKAGEGSCFSFTTTLQVSDVIDNRLVEQQKSFLADKRILIV
DDNLLALDVLSSILKSFHCHVVAANSGEEAIELVKQATLTFDFIMLDWNM
PDLDGIETYHIIKSQNNYQDNQFILVTSNANDNEAVDQLKKRINSVLVKP
VTSSSIFDEMMRLNGDEAYSNTREMKRDDELIQNQQHLSGAKILLVEDNE
LNQELALELLKQSNIDVELAENGAIAVEKFSSRHFDGILMDLQMPVMDGF
TATKIIRESDSSIPIIAMTANAMVSDKEKVLASGMNDHITKPINVNTMFA
TIAKWVSPSIKLDHDIDKAKLSVYTLPEKVISIPDFNTINTSAGLAVANG
NKSLYVKLLGRFVSGQDDFVERFKVAMLKQDKEEVTRFAHTLKGSAGNIG
ANALQGYADQLELVCANDANTDELVNLLDQVTEELTLVLNELTEYLAKEN
SVESTAPINDFNFNEEFTVQLAQLLELIENFETESIELAEDILNQLKGTK
QEALFEKIYQQIESYEFTEAETALNEFIDVLNN
>CPS_1986 universal stress protein family
MDMYQNILVVIDPTTDEQKALKRVIDLASRINTAAPDQQTNITAFFSIFD
FSYEMTTILSSGERDTMRQMVIKEKQKWLDDIIALSNSPITITSKVVWHN
RPFEAIINQVIEHKYDLVVKGTHQHDKFKSVVFTPTDWHILRKCPCPVLL
VKEHEWPEQGNILAAVNVGSDEAEHISLNEAITTQAKNIAQLITADVHLV
NSFPGTPVNIAIEIPEFDASEYNSAMQAHHKEAMSKHANSFDIPLSNTYV
EEGLPEAVIEQAALKIDAELVILGTIGRTGISAALIGNTAEHVIDQLDCD
VLALKPDGYISPLDVE
>CPS_3597 response regulator
MLKEKSVLIVDDEIGVRQALKRGIHRQFNREENRVSINEASNGKEAIALA
NSFLPDLIIMDMRMPIMDGLKACSILRNDSKFSATKIIMLTCEISEESAG
LLAGADDYIIKPFDIKALLIRVENGLFKQRAVDTTADIESDGVLTKNLFV
ECWLDYEIARARRFQHSLSLLMIKIETIDRKASFLSKDREVTTLLKRRKS
DLLIKWGENTFAILLIETSADDAILLAKRISWLAKKSPNLAQPSLGIANL
EGSLTNDLIINAEHSLAASICTGKIVLNRLVVNL
>CPS_4692 methyl-accepting chemotaxis protein
MASISKKVLLGYLLVLIVAIAASVTLFGAASEVKQRTSQFIGATLPELSD
LQQVKQSLDAIQIAAYGLYGTMIEANEFSNVINEKKQRLDQLLMANGALS
SHQEYRTIVEEINELVTVMTQLQRVMTADEVDWDGARAILVEVDTHSRNV
SEKLTKISKDVSQDANNSSAAIYTEIADIQRLVLALLASIVTVAVVAYTL
SHKKIALPIRELAEELDQVAKNYDLTRVVPALSNDEIGLAADSVNRLLKA
FNSGITDVRHIANNINELVDVLGSTSENADVQVNLLNEKIELLLSSMVTL
ESQISNGFEQSNSAAEQAKEGAQAVENGAQQVAKTSTSISSLANNIEASS
EMLIELRKSGDQVSTVVSTIAGIADQTNLLALNAAIEAARAGESGRGFAV
VADEVRTLATRTHQSTIEINTMLAGIVGAISQIVTSMESNQTQADQAVAL
SQKTVESLSLIQSSILSLSNVSTEVASQAEQSHHQVVDMRSWVEDFKTVG
DAVCQGSMESRDTSLKMTELAISFNKSVERFRT
>CPS_4191 PspA/IM30 family protein
MSIFKKIMTAIRGGASEAGEAIIDANATRIFEQEIRDAENHLTKAKRDLT
GVMAEQMSAKREVDRLTREVSEHEGYATQALEKGDETLALAVAEKIATLE
GTLADQQQAHDSFSGNAERLKELVKRSERQVAEHKRQLSMVKTTESVQKA
TSAITDNFSSSNSKLLSAKDSLERIKAKQQKFDDKMKAGELLESENSDSS
LQAQLKAAGIGSQDNSANSVLERLKAKQK
>CPS_0779 sensor histidine kinase
MNWIKKSWQLLLGKSKSQRGDNQHKLLLLVCIPCFLITATALFLTQISGY
LIAFILIVLFLLCSFVIVASRQNSQYQIRTLSNLIESMIDGDYTLRGRLQ
TNQAFQELLSSVNVLADTLSKHKIEAKESRLLLERIMEQMDAMVLATDEQ
GFVVMANASAHKLVLGQVDNEVGNITNIQLATLPIGAEIISANAGIIEFK
EGLITGEHFLSKESFLSDGKQHQLYTLTNAERLLMEKERKAWQSLLRVLS
HEMNNSLTPIVAISQSMQKKLQRADSEIDKVPLLDGINIINERADSLSQF
IASYSQLSQLPKPNKSAFKLALLIDNLSTLYPQCKIQCEIDDELLIEADK
NQLEQVLINLFKNSVEAMSKIDEKVIEINSSQEGNWQHISIRDFGSGIAN
LANVFVPFYTTKPQGSGIGLALCRQILFNHNGSIKIDNYQGLLQGSDKDS
PYVKQGVEVVLSLPIYVA
>CPS_2470 bacterial extracellular solute-binding protein, family 3
MKRLLSTVFTLSLAFSGMAYAEKITATGDSWPPFLSPDLPGQGIALQIVR
AAFKEQGHEVEMTFVPWTRSIKAVKEGKVDILVGTWWTKKRTTFLNYSDD
YLVNNIKFIKRVDDSFEYDGLESLNKKNVGVIRDYGYSDNFKKAMNFKKP
ETTKFINNLKKLVHNRIDLTLEDEIVARAFIKHEAPELKDKVSFSSSPLS
SNTLHITSGLSNPKNNRIIADFNKGLAKIKTNGIYDSILKTNGLL
>CPS_1592 GGDEF domain protein
MQTLNVLDNRFSPFNTYSTLSTDALVAETFTNTIFDKRQILALMTQLQTT
LDIDELLSIFAVEATRYVDFSGLYFKSQNLNTVLFGSRKAKKEQCFELKI
EDNFIGTLSYGINSPISLTNFKVLEQLHLCLLHPIKNAIAYHTAMQLAMQ
DGLTGLGNRRYFDEQLKRSMHNANRHHSLVGLVLGDLNKFKAINDTHGHI
AGDTVLQEFANVLRLCTRDSDSLFRFGGDEFAIIVENANDTALAIIENRI
NLALASNVQLNKYQLGCSIGSTFMNRADNELSFFERADEILYRRKMQVSS
HLSVV
>CPS_3536 GGDEF domain protein
MNDSSVAQKQLVALKRKLDTAIESRSSLEDDFNLQSNLLIQFIGKLTLVS
KGIDLELDNRLAQLRTLFTKSAPISEIEEKIAVISKLLQQHSITNRKNIS
HVHEQFSQAGESLQKINGLPGDLRRDLRTLLTETKEGKDSLIQYIPLLSQ
LLTFYDHSLKAKSGMANQGILQAPPVTSPENKNAIVGGSVILDAQFLEKI
SISLGALPLSKAHTSDLLAIKKKLMTNQSSEKVLQNFIDIFDVIVADFKD
EQKNAKNFLTTLSATLTTVQSAVKDTIVTQKNSQKANDIINLKLQSQLLD
MTGTVEKALTLSQVKEDINEKLQVIANTLEQKSKFEQQNHQQLADKLNDM
SAKVEQLEQQSEMFEEKLAEQQRKSMQDALTKLANRAAFDDFFAKSMIRF
HRKSFPLALVVIDIDDFKKINDTYGHTAGDKTLQVIANSIVKNVSKGVFV
GRYGGEEFVLIYSKIQEEALTAELNALNNFVARLPFKFKTNKVSITLSIG
ATHIKPDDNIHIAFERADQAMYKAKKQGKNQVIYVK
>CPS_1291 sensory box/GGDEF domain protein
MNVDILKQRAKAFDYVFDAIVVTDLQGFIIDWNKGSETLYGYSKEQAIGQ
PVNMLHVPGDTEHITSEVISAVENQGKWTGEIRMLHKDGHIGWIESMCVP
IYGENYQMVGALGINRDITKRKKETERLEHLAHYDQLTKVPNRYLLLDRL
THLITQSKRNNYKFALVFIDVDKFKLINDTKGHLFGDQVLMEIALRLKKS
IRNSDTVARFGGDEFVILFESISNKNDVSIMIETLTQELKTELIVNGINI
EINCSIGIAIFPDDGTTIDTLIATADKAMYKTKE
>CPS_1940 response regulator
MMNRVFIVDDDTLTCNLLKTIVEPIFGNVEAFQHPRAFLTLSLNKQDIII
LDLMMPDMDGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLN
VINTFTKPINTEVLTCFLTSLSNRQAQRELVSFNNDKANQGKFDFIPTEQ
DLREAIDKKQLILYYQPQINMKTECLHGAEVLVRWLHPEFGLIYPDKFIA
LAEQTGLIEQLSEEVIHLAIKQSVHWQKLNRATRLSINISAQNITSLKLP
EQLRMLVKKYEIDPSMIVLELTESALMDSEVTSLDIFTRFRLKGFQLSID
DFGTGYSSLSQLHKIPFTELKIDQSFVTNMKQEKESMAIVETCIMLAHKL
NMEAVAEGIEDKETWDLLSAEGCDIAQGYYIARPMPADQFDKWQFNE
>CPS_3840 putative lipoprotein
MIKFLTGLILLLFASSTFACTESKSKLFLSKLHWVTEDYPPYNYLDESGR
LVGAVPEILAMIYNELSIKKRGNNIIVLPWARLIMYMERYSDYGAFSMVT
TPERANKFQLVPLPITTKISVLALTSNIDTLKNKTFDELTIAVVRGDIGQ
KLLNIQKNPAKQVETISAVSMLEMLLRKRVDAIAYSEDVTYYQLKKLGVE
KSTITSLHLLKDDSDVNFVFHKDTSNCVIELFTKELATLNKNGKLQPVWK
KYIQD
>CPS_1932 DNA-binding response regulator
MYKILVADDHPLFRDAIVNIIGIKYPGSTTYETEDVESTLAFVKDNDEID
LILLDLNMPGMSNLSGLLDLRNQCPTTPVVIVSAEQEKQKILQTLSYGAV
GFIAKSSSKDVIGDALDSIFQGNVYLPSDIMRSPTNSTVTKNEFQALPES
ISLLTRRELIVLQHLTKGEANKQIAFNLHISETTVKSHVSSILKKLGASN
RVKVVLGCSDIDFNQYLKR
>CPS_2032 sensor histidine kinase
MFNNKQKQLVIILISLLLTFTSQASLASDTTILNEIINPQLIHIYEWETL
SVYEKENVSQKPANWDSAESFYGSTRLSLLGEERFYRAKFTIGWHHRTRN
LAISVGPLKGTDEVYINGFRVDDSGSGDYDLFFQNSYRVYRLPRNKTWFS
WFNYTKENELLIKLSSSKRGQVLDSDYVEIGDYETLALKSRDFDSTIKTS
QGSAIALLFMLILFIIFLHVNQYNKKSNTLFGFFIFYLSLSIASTSLFLN
GPEYDGELLLSLSACLDLVSLVVFIKIVSDKFDLNISHYKRNEKSIKIFG
TVSVLCILIFSDIFFAQKWFNLIIYIVMLLVVISTIHQLVIGRNIGGANY
SIVSALMIMFLGVAFNGLWGGNSWPISPYHIGAILSSIFLLYSIAQDFKK
MTLSMHAMSSRLVNIREIERARLTRDIHDGVGQGLATIRLFITMNINNFE
PQLGISLKNEVDQTSNTLKSVIRNLKPIEMDDGNPSEAIIELARHLCEIA
QIEMKVIHSDKADMNTENAYQLYRIGQEALNNSIKHSCCTLITIDIQRDR
DRLIMSISDNGKGIKKQVENLGYGLSSMQERALLIGGQLRINNAIDSGVQ
VFLEVPIND
>CPS_3864 methyl-accepting chemotaxis protein
MTIKVRLTAILIVMIILLATAITSQKIATNKNKHQTLSSDTRYLSYLIAD
EFRQSSIDLTRLCRLFVATGEQKYWDAYWLIVNWRNGEVERPNNVDNNLY
PDQRIKQSKIMKELNFSANEFTLLEKANSYSNTLIATEEQAMQTIKNGEV
AQGPFQKSPNESINDFALRLVFSDAYQQDVKKIMTPVNAFFNALDKRTAD
DLLRSQQDANFWLSNSLIVQVIVAIILLSLMFFMKVTLFKPLEHVINAMN
NIGGGDGDLSQRLHEHGKDELSSLGKGFNLFASYIQTVVIELRSAIGEIS
SSSAQLNTTANLTEQSVIEQKVGIEQVLIAIEQMIPAVQEVAVNASQGLE
QAKLSDEAAKEGLQVVDQANNNINLLEVDIDNASGVINKLAQDTNNIGSV
LDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQDST
SEIQQMIEKLQVGAKDAVKVMVQSKNRTTDCVENTGQAGHSLSKITSSVG
EITDINSQIAAATEELNASIEEIRRTVDNINQHVERTAKGSQETANKSDY
TTQLTSQMQLLIERFKTE
>CPS_4711 methyl-accepting chemotaxis protein
MVQFGFKNLLLITITVLVGLSVSLTSYFSYIKEEKTLTALIIKENSEFVR
KQAELIEQQLNEKALGLARIAKLYDDQGEEAGTEYFVKLTKTIAYSMNLN
SSAIGFESGVGYWNQTSNTWPEHIFSGDVRDESYYQLARRSSGTATSEPY
FGSMTYWVSIVHKIKNGMISVDMKLDFLNELVENSAEIPGAVALIFNQDT
TVLASTSKTVKNKKLATSYPWFKEAALNAVSHERGIYTYQLDGVDKLLFA
HQIKIADKYWYYTLGLDTEVAYASLSKAKQSAIISSIAATLISVILVFIL
LQIIYRPILVLKETITALSQGNGDLTQRLKVNSTDDLGQIADGVNRFIES
LQSMILEIKEATTALNGNVSKLKDQSEHNTVILNGHVQETEQVVTAIEEM
NATAGSMASDIANVALLTDNANSAGRESMKTVSQAQGTIAELVTDVDNSV
ESVSEMSSKTDGINSILSVIGGIADQTNLLALNAAIEAARAGEQGRGFAV
VADEVRNLASRTKSSTDEIESALSSLLKGNQTVVDSMSVTKERCQKAATG
AGEVSISLDEMTGIVSEINNLSTQVATAAEEQSNVTHEVSKNMTAINEIV
GELDNNGKQAFAELNSIDDINQQLTEIISKFKV
>CPS_0755 GGDEF domain protein
MKNILLLLFLISLHFSVFAQEVKLFKNFGIDNPMSYNFVRTIVQDKDGFM
WFGSSEGLDRFDGHQTLSFQHDSSRPSSLSSNVISRILIDKQQRIWVGTF
GGGLNLYRETTQDFLHFTTKTKNATLTNNSVNALFEDSEGKIWVATENGL
NILRSHDEKWSTQQIFQELGNPNSLTHNAVLSIIETRNQEIWVGTNGGGI
SVFDLQGHFIKSIKYGDQNSATYVNKFVSSLHLDINENVWIGTVDSGLLK
YTPSTEQFIHFQLNVDDQSTISSNAISNIFQDSEQNIWIATDNGLSIYNY
KTNHFSRYNYSPNNPYSISNDFVLTFFEDNHKVMWIGTFSGVNRWDPNLA
TFRQYSTQTDPVLKNHNITSFAQFDKENIYFSTYSAGIYRLSQYDNSIST
ADFNASFSEYRIMTMFADENTLWVGTRASGLFSINLTTKKVISYSHDAEN
NNSISANSITDIIKDRNGNLWVSTFHQGLNLLNKDGTFKRFIKNKLNREK
GPGSNHVVQLLEDDQGFIWLATFGGGISRFDPMKRTFKHFSHEENNLNSI
SDDFSWIMLLDNNKNLWFGTQSSGFSILSRENRQNNNFSFTHLDTKDGMK
SLTVYGITQDAYDDIWFSTNKGISRYSLGDKSFKHFNLTHGLVDLEYTHS
AVFRSMDNTLYFGAGKGMNSINPEKINTSIFSPEVRLTSILKLNEPMPLG
SSLSKLTQLEFDYSEQLISFEYVGLNYAAPESTRYKYRLLGFDQEWIDAG
KSRRATYTNLPAGSYQLQVIAANNDNMWSEPGLSLDIVVKPAPWNTWWAY
VLYAALIALLLLTYSRFLNRKLLIEQQQKANLKQQVRDKTQEFHLKNVEL
EQANKQLENAATVDKVTGVKSRRYLDIYIEQASQLMSQIHENILPVQRSL
LPRLYLVMIKLENIEQVTNSQLVNLTDLLLYSRNNEDLVIRWADDTFVII
GYEKDDNTRELVTRLTDRFAQVLGHGIKSNVAYSFYPFNFEQPMALSWDQ
VSVIAEHALKVARDNNMNWLGLYAPKVQPFNYLDVIQQQDVGELSKLVKL
KQG
>CPS_1405 sensor histidine kinase
MTMIKTNKRMILPIKLLFIAVIQVLLTALITYVLVTNEYRELSSQSLDTL
EHFLVEQKKQELKNYTALAVLAVDHLYQTSELDNDVAKKLVTNILDKMTY
NGEDGYFFVYDDKGNAISHPKQPFRIGKNWWELEDGKGNKIIQILISNAK
AGGDFYHYPWTKPSNKKISEKIGYSVYLEKWKWMIGTGVYLDNVNLQLSQ
LQFEIDEHINKTKNIILILALSSIFVIFLFGVTVNLRQKKQTDEKITELG
QRIVNVQEDENRHIARELHDGIIQILVSIKFSLEATKMHLSKAVQEVPKP
LQHAEDNLVIAIDEIRRISHHMHPQILDELGLSAAIDTLSADFSDRIGVS
IKVFKPRARNLLPDFINTTLYRIVQESLINIEKHAKAEHVEISLSFDKNW
LTLIITDDGKGFDINSVSEINDCGIGLRNLAERVEYHLGEFSVVSSSKGT
TITAKIPKSSFENYFNQTRVKNNDNNGDIEFGQ
>CPS_0274 sigma-54 dependent transcriptional regulator/sensory box protein
MPANIKEFLADSQLLLNAVGEGVYGFDKEGNAVFVNPASEQMTGWKSEEL
LGKNIHKYHHHTYANGEVYPSEECSIYNTMRDGVERKITDEVFWRKDGTS
FPVEYTSTPVYKDGELIGAVAVFRDVSQQRLADSNLRAALKKVQDLTEKL
QAENSYLQEEINENWHGSGLEGNSPKFLAMLQQIKLVAQTDSTVLILGEN
GTGKELVARNLHQLSQRHNTPLVKVNCAAFSSNLLESELFGHEKGAFTGA
SEKRRGRFELADKGTLFLDEIGELSPDAQSKLLRVLQEREFERVGGSKTI
KVDIRIIAATNQDLLAMVEQGKFRMDLYYRLNVFPIVMPALRERIEDIPL
LCHSILAQLNTKLNKDIKSISKHSLNKLASYHWPGNIRELQNILEREVIL
STSTTLQIQQKFDKSQSVVRTFNKPLADIEKAYIIEVLNDCHWRIGGKNG
AAKILGLPDSTLRSRMIKLKIKRG
>CPS_0041 response regulator
MAKYNYQNMRFLIVDNIKPSQEILKQFVMRLTSKQVDSTHYAQDVASICQ
QRHYDVIFLGYDLGENQKNGQQILEELRVNGYINRHCIVILITAEVSQSM
VLAALEHKPDHYLCKPYTLSELEKRLNFCLHKKMAMAAIYQALDTDDPEL
VIKRCKHALSINTPYKTECLGIIARQYFELEKFDEAKAIYLAHQNTSNCQ
WATIGLGKVALHEKKLNQAEKLFKLLIRDCPLYLSSYDWLAITYEEQFHY
ILAEEILEQALLLSPRSLTRLKKYAHLCIHNEHFDKATAAFEQTYNLAQN
SIHHCADNAIKYVQALIEHLPSLPLVDAKKMNNKAFSYLKQMARDFNESD
IRVQSHLLGACLLEITKERQLANDEIVRGERLLHSEHNNIENSKLIDISL
TLKKLKRDDLASRILAAREESAIYQSSNEMNRQIFNIKDKAQADIELGLT
LYTQKKYREATLKLQDASAMFPKHIGIKLNLMQVLLVSYDQDKQSEEDLH
KAKILLMELTRLDLSNNELERLKKMQKKYQLIAGI
>CPS_0287 conserved hypothetical protein
MFKAMLKLLFPSIKNNKKPNYFYYEKDKNTEEETQQQALEKVQRAGPVKL
LRLASVEETHCQEFYDFLFGQSPATTQRDELSHYVADKIEAVLRKPNTII
EAMPVLPASLSKVMDQLSDNNFDTQELINLIQQEPSIAAKVIELANSSFY
NRTNKEVSDLKSAFMLLGSNGLMEGVINGFVSKMTPQAQIYFKQYGNKIW
QHSFGTGVIAKALIKASPYKAEAAQGYLIGLICNLGDMIIYQLLMEAFSF
IHPDCQPNSYAFKELMQQKSKKLTYHIAKHWQFPQSILDALALQVKVTNA
SMLAGVFSKRPIACFVYEANIISELIMMLEHNDKTEGEIKESVEILLYSN
EAKQYVERLLVDRVNN
>CPS_2474 bacterial extracellular solute-binding protein, family 3
MKPSWLAHCFLIMIGLMMVFQSPKGQTRELIACGHPYYPPVSWVQQEQLV
GVAPAVVKLIFAELGYQVRLDTLGNWKRCLSEVKTGHADIVVAAYRIASR
EPDFDFSEQHIVDDPIGIYVNPNKSKIYHSLNDLKGKTVGLLFGDSFGDS
LDKFIEEHNQVEYVSEGQQNLKKLAQGRIDFIPLGIVSGKLQTQKFGYTK
QIIAAPFKLKTEYYYLAIGSHSELSQHLPYINQRLIELHQSGKIQQLVTK
YSKTYLESSTKANTP
>CPS_3719 sensor histidine kinase
MSEHFLQQKYNSISENPIYLFWFLQFCFWSFVSLISLVSLTLWYVQIDVA
HLNHTFLQSFVGVVFSLPLYWAFMRCWNTSIFIRVFVSITSVLLISFIWT
VIRVELYIRLTGTDEIWTQFGGWYFSSIFIYFCWTGFFHGIRYYQLLQFE
HEIMLKKEAEAKTEQLKRLSAQTVARDAKIKMLRYQLNPHFLCNTLNAIN
SLIECELPEKAQLMTVQLSKFLRYSLDNDPDTKIALEFELKALELYLEIE
KTRFGERLQLDFQISEAAKAAFIPSLLLQPLIENSMKHVIAQNEEGGVIS
LSADVIDNMLVLELSDTGSAKRVDINKIKSKTGRGVGLRNIDERLKALYT
DNYVYNLNVRPSGGLKTTIKLPLDSQGEPDIVNQAYNSMKVC
>CPS_3608 sensor histidine kinase
MNKPDPYRVAYERERKARLLAEHLLDNKTRSLYDNCIKLESTVKALKTTQ
QQLIQSEKMASIGQLAAGVAHEINNPIGYSISNLSMLSEYVDSFLLLDDF
MISNLPALASQDVAQSYQQLREQEDIDYIRGDVKSMMAETGKGLNRVKEI
VSNLNKVSHSGSFEKELCDINMLIEESLKVVWNELKYCLTVNKHFTGLPK
IYCHPGEINQVLLNMFINAAHATKDKGALDITTGIKQEKGREYLTIEISD
QGEGIPQKVINKIFDPFFTTKPVGVGTGLGLSVSFGIIEKHKGKIEVASE
ENQGTTFTIYLPY
>CPS_4396 hypothetical protein
MNWNKRLLDTPIIGDITKKIVSAKASREAHNISDHFTQFLQPCVAVSQTL
KEEAFKIRHNVYCEELAFEEVRDNGQETDEFDHQSMFSLIKHKPSGTFTS
CVRLVTSSGPDELLPIEKYCMGSITNEELSPKRFNRNEIAEISRLAVKSD
FRRRKADNYKGSGTGVISEITYSETELRCFPFIAIGLYMAAATMSMNTGI
RHVYVMMEPRLARSMKFIGINFQQLGPPVDYHGLRAPYYINPEIFMKNLS
PGFKSLFSIIEEDICSQLNQLDLA
>CPS_2387 DNA-binding response regulator
MTHILIVDDNPDIRQPLARYLGDHGMRVTSVDGGKAMRETLKNSVIDLIL
LDIMMPGEDGLSLCRFVQSNLKIPVILLTALTEDTDRVVGLEMGADDYVA
KPFNPRVLLAKIKAVLRRSQSFPVQVEQVKSDILIFDDWRLDINQRELIN
KSDVTIALSAAEYRLLKAFLLRPQAVLTRDQLLDLTHGREAKAFDRSIDN
LISRLRRKVEVDPSSPKLIKTVWGGGYSLSVPVVHQ
>CPS_1407 universal stress protein family
MTEINTILYATDLGKHTRPAFRMAVSLAKSNNAKIHFLYVIEPLNTNTAS
LVNSYLPEGTIEDIYQRSIDELHEKVKNRIDKFCLEELDGEEFPGGKPVA
DIIEGSPAATIVSFAEDNNVDLIVMGSHAHSVLNNLFIGSVADKVVNRTA
TPVLLVPLKND
>CPS_4795 RIO1/ZK632.3/MJ0444 family protein
MKIPKRLLPLVEEGLIDEVLNQLMSGKEATVYRVRCGDEIRCAKVYKEAT
KRSFKKASQYTEGRKGRSSRRARAMEKGSKYGKSQQETAWQNAEVDALYT
LAEHDVRVPQPYGCFDGVLLMELITDEQGDVAPRLNDVVMPAEQAIEDHA
LMMIYIMRMLCAGIVHGDLSEFNVLVDAYGPVVIDLPQAVDASANNNAKA
MLLRDVNNITTYYAQFAPNLALTRFGEEMWALYEAGELSDTTKLTGLFAE
DTQSADVETILAEIQAAFEQEQDRLAYLKEAAEQD
>CPS_4714 hypothetical protein
MRLFKFTLAISLVFVITLSAVFYSRSSVVTAIVNNYLTEHNSELTCIDFE
VNNNFDLLITRICIDSPYAEIELIGSLVEWRFEPSKLDVDNIADAISAIN
IDVATVRAKGDFQFPENPTSSNVKFSELPTLIRKKINDLALISIPVEIDI
KTFSYQPFTNKKTNKQTHQKANKNHTYQGQFSANAQQLAFSLANQKNESV
LALALTKNGDEIRASLATDLAKLRPFLVRHQRALPLSLSTLLLDDSWIAA
GKLNSQLDWQQQTLALTNQMTDFSFEASQGFSSLGPIELETTLSWQTALV
GETLQFDFTHKDYQRNNIQLVFNAEKLLEQLTAQTVDQQIINVLTDNAIN
SLTVQSLGSLTIDFAQQSIASDSLDIVSRNLYGPIKLSLNDVLFNFNDDP
AITTNLQKAKLSLTGAASIAQLQPYSRQPVKVSVIGEIVQYSDIWQLTLA
QGTAIELAQLSLPSNKSVIEPIRKSQQSTPNAQPNIKSLISHWQGKVSIA
KNDNQPQSKNSESVTFALDINSQIKQLNYPNILKVDELELTTKLSGNIEE
ITINTKVIADDVPIATAILMGDLRHPSVIVSAQDVLLTDLLALKLKLPVE
LKLIDGNIDYHLSGQLKNSDDLLANPMILTLTVQDVTGEVDGTWLQELNW
QQKLQLQNGEIKSRPDQTKTSSNLTIAKIETATPINNFSTRTYIDFSQDR
LKLLAHNIRGHLLGGRFDIPQVQWPFRKDLPVKVALTKIDLEKLLELDKK
QGIVVTGKVSGQLPIQYDGENFLIKGGSIKNVGDGIIQVYNNPAVEELKA
SSTELKLAFSALENLHYHHLSSEVSMADDGYMLLDTAIRGRNPDLDNDVN
LNLNLSYDLLGLIESLNITEDFESKIIKGLYP
>CPS_0576 sigma-54 dependent DNA-binding response regulator, Fis family
MPQILIVDDNPDILEALELLLSLHGYAVLTAENEKQALLAVSHQRVDLVI
QDMNFAQGITSGKEGKSLFTALKALNSDLPIILITAWTQLETAISLVKSG
ATDYLQKPWDDVKLLDLVAKYSLNSKINQDKNNQSVSNQKPADDFIYKSQ
EMQTLISQASKVAGANVNVLITGANGAGKEKLADYIHQQSPRYNSAFIKV
NMGALPHDLMEAELFGAEKGAFTGANQARIGRFEAADGGTLFLDEIANLT
LAGQMKLLRVLQTGEFERLGANATLKVDVRVLSATNADLRLAVQQGTFRE
DLYYRLNVIELNLPDLAYRKADIVPLAQYFIGNDCSLSDEAAQTLTDYTW
PGNVRELENACKRALVFANSSTLTASDFQLASSQKEAALGEKGNIEQVLI
KHKGVIKHTALELGLSRQALYRRIEKYQIDVGSLC
>CPS_3929 methyl-accepting chemotaxis protein
MSSTMKQLITVTDLKGNYTYVNQAYCQTTGYQESELLNTDTRSLTHEQMP
KVVLDELSATLAKGFSWHGLLKLKSKTGNKIWLDVFITPQYSQNKITGFQ
CISSIADTSLTSNAEQIYQALNKNNNWITFEFTKNHKFAFLVLLSIIAQG
FIFTQLGLFASIVAGLSAITPVLVFWSDIIPTAMRAQRMQSVFDSVSRKV
YFGKGTASVFDFNFLLLKTKIKAIIERTLDAAKPIRAVMAKVSQGLTDTR
TTLAQQKNDLEQLSTAMNQMQDSTQDIAQNTVNVASELEITFEHCEQSQQ
SIYETSDKISHLAQSVESASSSADSLTQSANNVGALMEEIQSIADQTNLL
ALNAAIEAARAGEHGRGFAVVADEVRNLSSRTQDSAVKIHQRLTIMLNTI
EEWVALMNKNKDEAQFCVDSAQASHQQINSVVEKMQNINQAATQIATAAE
EQSHVSHEINSHLTDIAQNTESTWQQTDNVAEQMEQLAKSVDDIADLAST
FVPKK
>CPS_4695 response regulator
MVYQDRDSVEPAIQQIMELELSFKSYKYNPKKLHDITLMKPKVLLLASNN
VKSTIQFYINYLEEYEQKIAPHSAILLISNRETYRAYLACENGLFDNYVI
INPLNNPYRLKLVLLQELKLIENHKNSSLEQLISEGEDELASCIEHGVAL
KKSFTQEVSKCENEILSATNEALDNKEAKAVLQNLIGLSVGDINENVSSS
IQKIVDQLIKLKANNQSIKQGIEKLHIPKKKTVIGVNTDLLTTEDAEKAC
LKTSRYKILIAESSDLFTKVIEEIFADTVFIYALVNDGQAALEKIRTFKP
DVVLLAYDLPIINGLEVTRLIREEGNKVPVIAYAHHKDKSVIKRWIPFGL
SGYLIKPLKKSAILNSVTKAVKNPIEIISHHKVADKVGIQWIAEYSIGNI
EIDEQHKVLFTMINDFFHQDNKEAAIMLFQSLSSYIDLHFESEENLLRQI
NYPDTEEHIKKHGELREKFHLLRGKLDDYDLDVHHKIAMFLYNWLAKHIL
KADMEYKSYALSIEESSFK
>CPS_0579 phosphotyrosine protein phosphatase
MGMFNSILVVCAGNICRSPTGEYLLKDKLKDKSADNSVENQIKVSSAGLT
ALVGKGAEATATKIALSNNIDMSPHKGRQLNSKLIAENDLILVMEERHLS
DLLGQYPEARGKTFLLGKWIDDTEIPDPYRQSHEAFEHVYQLIDRACSAW
EKYL
>CPS_4961 methyl-accepting chemotaxis protein
MNKKLLSTVLLLSTLLTLLAYLSQTYLVSAQLYSLFLFTLSAFTLLFLSN
IIHKQTLKTAALIAEQEQTHSNAELGVIGGEISNKASELAINSAEISYFL
AQLSGAIEQSSEDVDRLATAAEEMSANSKQINDNAVLASQQASHAMSSSN
ASSAQLSNNINIVNQLNVSVNSAAEKIRSLEKKALAIQSITDVIDGISAQ
TNLLALNAAIEAARAGEQGRGFAVVADEVRALAGKTADATAQIGEMLKQT
SDETSATTLAMSQIVEQTNSVVSTMTELSHGFAEIDQLLTDSSAASDQIS
HALTEQDFAAEEISSSVVRLHDFLLNKSSETQDASIQAQTLSNSSESIFV
HISSFESNSLIANMCQQAQLSANQVGLLFEQSIEKNLITQQQLFNFSYQQ
LGSCEPKKYSTSFDKFTDQHLPKIQEPLLVQFPEMIYAGAVDINSYFPTH
NKCFSKPLTGNAATDIINNRTKRLFDDPTGIRCGKHTDKFLLQTYKRDTG
EIMHDVSAPIFVQGKHWGGFRIGFKAK
>CPS_4351 hypothetical protein
MILIVAASLYLHFYPNEKVTEFYNEQKQALLDGFGEFSDTKVRLKADKIY
LDLESELENFSEKEVERLKEITSSRDNVKAFYLSICKTDTRDIDFHITNE
KKVCSTIDRYTSML
>CPS_2231 hypothetical protein
MRLLLCLCSLLLSSYSSKLFALSADHAVLSSVQSQNKSVIQLATKPKNNP
LKSSSDKTYDFASIELLIEQEVGRIVLKQIYKNIGINITISPLPGNRAQH
FANTGINDGEIMRIWTYGDENPNTIRVPTPYYYLETMPFVLKSSKISILL
KEDLAKYRLTKIRGVKHTNNITKGLTNIYEMSSTDDMFKLLLSGKVDVLL
TNTLDGNLALERLGLRNVASMEKPLVRLSLYHYIHKDNKVLVPIVDKEIQ
RMKSNGELATLILQAEKSVFQLNQ
>CPS_0821 conserved hypothetical protein
MLNMNFDEQVFINTQEQPWVASPKAGVWRKPLAREDAERGHATSLVKFDP
GASFTEHDHPLGEEILVLSGTFSDHTGDYHAGSYFRNPEGFRHAPFSKDG
CILLVKLHQFQSGDNEHVVIDTANKSWSPGMGNLMVMPLHSFEGESTALV
KWPKDERFQPHKHFGGEEIFVISGEFIDEHGRYPEGSWIRSPHLSEHFPY
VEQETIILVKVGHL
>CPS_3631 GGDEF domain protein
MSVGIDSLDNDHKKLIAILAQLMSAKNEKLGQDDIDVIFERLEGYCLSHF
AREEALLAKIDYKQLEAHKLSHQAFIKKIPQLKEQWFAKVTESEAVKDKI
ILFLQQWLIKHILEEDLDYVPAIHCFQEFSRYEKDKKAKHPWLRFFSIKL
SHCLILSHRVLITTLLPVAAVLLLCFFILKDNYQRYDSISKVLGLNSVIE
QVNGISHSLQAERGLSTGYTSSNYRSFAKQLRQRRKSTDAKIQYFLWLLE
QSANQEIKVSVSRYMTNFQEIVANLSRHRMHLDQKIVGFEETYHAYTQLI
GQLLSVSDHLVHIEIGSSHANDISAINAILRYKEFMGQIRAIGMKMAENH
QENIYGNVEVSLLIGKQLNTLLIFKNAANSAQKSICGHYCDAFALRQHLE
SSYLETMQFEDKDVRAARWFKVMSAKVDNLNSVVQRLINEFDGQIYIESQ
KLKKEGYLIILAMLIFLLVAIFFALVLNYSIISPVRKLTYALNDMSEGQN
NIHFNHIDSKDEIGSMQLAFEKLRRKLLQGDVYKATVSQQQKEIKYRKSQ
QDHFQQLALTDALTGAVNRHHFNEVLDQEIANVNNHGSPLSIMLLDIDHF
KSVNDRYGHGVGDEVLVMFYQTCVEAVRSSDVVARIGGEEFVIIMPNTQL
VNAQKFAERLRQKIAKLELNIANNQISVTVSIGVSQWQSEYFTNAETFVA
HADKSLYQAKNSGRNKVVVAQQ
>CPS_1325 sensory box/GGDEF domain protein
MFFLSDHDTLISSIEAIGASFAVFEFDPQSVAFELVSCNSRYEDLMGYSS
AKALGQPLTTIFPRYIHNPLKEAFIHCKNERIALETEIVLDYKGQERCWR
SIVSPIVNSADEKFRIIQTCVEITEKKVLEKQLNLSMKRFEAVVNNAYDG
IITIDEQQNVKLFNEAAQSMFGYSEQEIMGQPLTKLLPEKYQAKHHGYVE
GFKRSQVDSRPMQTRAAVQGLRKDGSEFAIEVTISKIRIADNVEFTAVIR
DISEKNQLLEELILSSRRDPLTELYNRRYFTELLHSEITRSRRFKRGFSL
LMLDIDHFKSINDRYGHACGDAALIAFSKAVTNSIREVDTICRWGGEEFL
VLLPEIPKVTAMVVAEKIRKNIENLETIYEGDLIKVTVSIGLEYFSGDAI
EMSSMINKVDQILYRAKDTGRNKISTEI
>CPS_1937 methyl-accepting chemotaxis protein
MRLIDISFNKKIFILLFFPLLGFLGIGLNAIVSSLSTNNEMEQLSKYTKL
SSVYSELVHELQKERGMTAGFLGSKGVKFAYKLPSQRQNTSSIAGKRLDY
WQNNQFDNKQVQQLNDNINQRLNMLNQIRSNVDSLSIPISDALAFYTKTN
ELLLSVSTIISSISTDAKITKETVAYYNFLQGKERAGIERAVLTGTFASG
KFNPGMYQKFIRFLSEQNTYFYSFNAFASNENKNYFSQKQNAPSIKEVIK
LRKIAIDNATSENLNVDASFWFEQATKRIGVLKEIEDELTRSLLLLTKET
QGNAFNSLIYYLISSLMILLLVAIFSFYILKELHNQVTDLTCVMSKVSDG
NDLTVRAKFTGKSELGLISTALNLTLEKFAGAMSEISTSSTMLAAASEET
SQTCEHNSRSLVEQQDEITLIATAIEELSATVKEVAGNTQLAADSAKEAD
EQAQGGAGVVQESYHSIELLAEEINNLALRITSLHESSNNITSVVDVIKS
VAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQQSTSEIEGF
ISALQSDANSAYSVIEKSQKMAVSAVENSKNVEQTLGAITHSVSTIFAMT
EQVAVAVEEQAMVTQDVAKNVVTIEHKSMESATGSTQITTTAREQAILAV
TLQDISTIFKIS
>CPS_3317 putative response regulator NasT
MDPVIEDITVLLIEEQPNVSSMLKNALMDFGYHITKHISFDDNIIEQIDL
CNPSILILATDLPSEAILKELAEINQLLPLPIVIFAENDSPNVIKNAIKS
GVSAYVVNEILPQRLKSIISVANERFKAVQSLRNELKQAKTQLEGRKYIE
RAKGLIMQQKNISENEAYSKLRKMAMDQGCSLAMVAKNIIDVCQLLSTSK
A
>CPS_4705 sensory box sensor histidine kinase
MLHSTAGWKNMDFKRFSLLIATRTILAMLTLIFLTQAIMSDGYHATVLLL
SAVLLIQFFEITRFISKTNAELVRFFEAVRHADFSQRFELKSLGTGFDEL
GSTFTDILKRIQRVRSNQEAELRHIKAIIEHVPVPLLSIDHNGKITLWNN
SVRRLFGTNAVTHIDDMAQFNEDFPKKLQSILAGERTLVHITIDDMEHKL
IISATEITTATQQETLLSMQDIQSELALAQLQAWQDLVSVLTHEIMNSIT
PVASLAKTAVDLVQDVQEKTRTLPAITNEITEELDDVLGAVKTVARRSDG
LMQFVTSYRRLTRLPSPNKKTISVATIFDHVTTLAKQNWQKDNIELTASI
TPQALDIHVDPDMIEQILLNLLLNAEHALITTAGVIEKKNSTPKIALNAF
LNVRGHVIIEVADNGKGIENKNMTQIFVPFFTTKKEGSGVGLALTRQVML
AHNGKVAVRNNSQGGATFSLTF
>CPS_0629 GGDEF domain protein
MFIKQCLVTFLIIASYISSIFFCLSVNANENKRADVIIALFKTNKPASPE
QADSLLQELKSTIASNDFLRQKEYIRAKCWNQKAETNEQIISAISYANEQ
LDIFSQYTPSKITIDLTLCKTSYQRLLGQVETTLKDLTTAINQAYTIEAQ
LLVAHGHSQRGTLHSYQGNYSASLEDLLTAQNHYESLKLTYWANINLGEL
ATSYRRFGDARTALKYQLQLEEIYIKEGKIFEANGINIQIASSLEQLNKL
DEANTRYQVSQQFLLNKQPVIAADMSINIANNLITLGQYDKALTILQQAE
STITPEFNAPYSFLQLYLANAQLKLNNYPASLHALQNAEAAFLIDKNQRG
LSKVHLLRSNIHEANKSWKSAYFALRNHLHVHLAQDKSVLTKLNAELQTR
FDTDRIKHENTLLVQHAKDKEIQLNMLQRNKSMQFIIITLVGIILILVSI
FAYKQMHHKHQFKKLAFTDELTKIANRRETYFQAEKCLTYSKKNQTPFSL
IFFDADYFKLVNDELGHNIGDQVLICLANIASNVIRKGDVVGRVGGEEFI
ILLPDTDIDTALSIANRLLTNIEQYEWSIISNDLTQTVSAGVVSYQGEND
LSELLFKADKALYEAKAAGRNHIKTF
>CPS_4293 GGDEF domain protein
MSDIKSHTTPTASDVPVVNELALKQINSQIANQLNTGVLVIDADFNIVIW
NRFLQVHTDKVPGSIIGQSIFSAFPELPQRWLSRKLSSVLQLNTPSFCSW
QQRHHLFELPHTRPITTDSEFMAQNCTFLPIETDVNGKHICILIEDVTDA
CHYQMQLQKTLAEIAQISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKL
SLIMLDLDHFKLLNDNYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEE
FAIILPETDSAGAIELAQRICRIIATTPFTYNDQVIKVTVSLGVAQLSSK
ESNYEELITQADSALYQAKSQGRNQVCNAAELVS
>CPS_3464 EAL domain protein
MNFYAARQPILDKSKKLFAYELLFRDSIDNVFPDIDGDEATSKMIEASQF
NMGISEFTGNKPAFINFTLETLKQGYPEMLTPDEVVVEILETIKPGKQLL
ALCKDLHKKGYTLALDDYEHQNVWAHFYPYIKIIKIDIQVSGIEEIREVL
KATKDHPHIKMLAEKVETYEEYDQMLQLGFDYFQGYFFAKPEMIKTKNLS
PSQIAMAELLYETSKTELDLNSITNVFERDVSLSYKLLRYANSAIFKRRN
EISTIKQALVILGSGELKRFIGLMFAITANPNKPSELINLAMTRAKFCEL
VAEDINSQLDASIAFLTGLLSMIDAILDEEMATVLEKLPLSQEIKNPLLT
KKGIMAALIKLVEFIEQAQWDKTTLVMEKLQLDKDKVVEHYNQAVTWADE
QTQAAD
>CPS_2228 hypothetical protein
MKKLFKSIPLVLISFLSVTSMAAVSDELPDRGPIPFANYDQDENGFISEQ
EFTQVRSERMAMKAAQGRPMKGAGNSPSFEAFDKDHDGQLTQEELIAGQQ
VQMQNRSGTQGQSSKMGQGRSQGAGMGKNSNMPHFSELDINGDGIILEQE
FYNARAARITKRAEQGYPMRNIANAPSFADIDTDGDAQVSATEFAEHQVK
HRQQMMQK
>CPS_2121 sigma-54 dependent DNA-binding response regulator, Fis family
MNKNILLVDDDLDILSALKILLVPEGYGVNLCQTPSSALAAIKKTQFDLV
LMDLNYSLDTTSGEEGLTLIADIRKLEDDLPIVVMTGWATVEVAVSTMQN
GANDFVQKPWDIERLISIINNQLKLASSEKNSQRLTQQNQLLQQRLDSEF
KGEIISQSPVMQKALVLIEQVAQSHACILLTGENGTGKSMFARYIHQHSN
RKDANQISVNMGAVSETLFESEMFGHVKGAFTDAKSTRIGRFELADGGSL
FLDEIANTPYSQQAKLLRVLEDQQFEKVGASKTQSVDVRLICATNANLNQ
MVAAGEFRKDLLYRINTIAIEIPALRHRKEDIVLLADAFLTQWANKYGRN
KLVLDEQAKNALVSYDWPGNIRELNHVLERAQILCQGVFINVNDLGLSVN
TTQTDTAKVDVKQGEFTEKQTLDSLADLELTIIDQRLKHFDGNVLKAAKS
LGLSRSALYRRLDKI
>CPS_0007 conserved hypothetical protein
MPSKEITTLLENKLVQLTKRISAIEADFHKGRSQDFSEQATETENDGVLD
EIHHEAKLELSLVKSALKRITEGLYGSCVECEEPINPDRLSALPYTTKCI
KCAV
>CPS_3358 transcriptional regulator, ArsR family
MTNTSRQKVLFLCTGNSARSQMAEALLKHKAGEHFEVHSAGTQPDAVDVR
AIDALVKFGVDTKGLVSKNVTTFEGIPFDYVITLCNKANNECRSYPNAVK
QLAWDFPDPKERAGNNPFSTTLTELNSRLSMFLSVEKNAISPESTPQINS
ITEVNNQLTDFEPISFYKCLTDDIRLKALMLTHYHGELCVCELMEAMEEG
SQPKVSRNLAVLKKAKVITDRKHGQWVFYRINPELPLWAKSVIAETTENN
ISQIHNELQRLAKMQNRPDRANFCK
>CPS_2122 sensor histidine kinase
MKQNQQNKKSFEVQLTQLFLFTSLPLFFLLIGVMIYANISLYLILLTMLI
SSLVIVYSHSKLHQKSAYQFRSLSNLLDAMVQGDYSLRARISDGDEALNE
LVDSINSLSLRLNKQRIETTESQLLLTTVINHIDVAILALNENNELVLTN
PAAKKLLQIPAEQQEFDLIESFSQFSQIAAMNSGNSQVMSLYFANQQGKF
NVHLEEYRENGKPQKLVFITDVSTMLRSEERNAWQALVRVISHEINNSLS
PIASISQSLRRLLARQEKLENHKEYLVEGLSIISQRSNSLTEFVNSYKQI
ASLPEPKKQPSSVLELVNKTVALYPDECIEVQNIDDITLVLDAVQFEQVL
INLVKNAVEAVKSAGEAGKVAISGQVNGKVFSLSLADDGTGVSNLENLFV
PFYSTKSKGSGIGLVLCRQIIEAHGGKITLTNRLGVSGCIATIELPL
>CPS_0081 response regulator/GGDEF domain protein
MSQRLLIVEDSKPIATVIKQIARSLKFEVVIATDLAQVENILSTDTDFFA
ATIDYALPDTLDGEAIACVLSHGIPSIVMTGKMDDETRQKILSQPVIDYI
PKENSQAFLYLKRVLHWQQTNNKNTILVVDDSSSARNHIVELLKRRNFNV
ITANNGVQALEKLAQHKNIKMVITDLEMPAMDGIELTNEIRRVYTREQLA
VIGISGASNGIHSARFIKNGADDFLRKPFCPEEFYCRITQNIESLNNIAK
IQHAANTDYLTDLANRRAFFRSAESRIKEYINKKVPYCLAMIDVDFFKKV
NDTYGHDSGDQVLKVIALYMRKHFGAGLTARLGGEEFAVLLHGLDADYLH
NKLDDFRREIAVSSIPAGDTSISITLSLGVVFDSEDELSKQMNEADNALY
AAKENGRNQIVVFGAELDD
>CPS_2516 hypothetical protein
MFSIFKKDPVKKLNKLYEAKLEQAMHAQRNGDIKSYSMITAEAEKIAVEI
QAIENSTKP
>CPS_4928 sensory box/GGDEF/EAL domain protein
MTDYASLLMSLTSGSALDSGCMEQLIQEGLYVTPALFSVDRAALWVLDKD
EQAYLCEADFFDGMIDHRSSQRLTKKEDAELFSFLESTSEIIINNYFTYE
SFGLNTSRILSRFQLCSLLLIPLQIKGENRGFIFLGDSQKNIEWSPDVLF
ASRILVQLFERALLALDNSVAETKLQHQYQLMSEIEKLAKIGGWDYEIST
GKTHWTEETYRIYGLSLDEEITLEQAAKFYSPEVQKTIKDVFELAVNQLI
PYQVELPFIDAQGNHKWVKTTGQIRSNAQGIATHVYGAFEDITEQKQLLD
SERSTSEDLKTIVDNLNDSIVTISSKGIILSANRMVEKTFGYLQQELIGQ
NVSILMPKPFVSQHDKYMQNYLKTGHAKIIGVGRELPAMKKDGTSFPMEL
SISEVLHGNDKVFIGIVRDITERKKAEKDIHQLAYFDETTGVMNRYSLER
DLKKCFDKSLLLNENITAMLINLDKFSQVNLIYGDDTGDVILKETATRLN
ERLPSWVVTYRSSADSFYVLINPSAAVGLDDARIMTNEDLAEKILKEIHQ
AITINQHVINVQASIGILNIPAKDIDYIDIKPLLELAVFNAKNKGGDNYV
FASNNDTCSLKRHSELSLAMKSNLFIRELNIVLQPQYSTQGKIVGSEALV
RWQSASLGGISPVEFIPLAEKNGAIIELGNWIIDKTCSLLAQRRVFSKET
SPISVNISAKQIAQPNFVDNLLTSLDNYQVPYSELVLELTESALVTDLKL
VVSKMELLKSKGILCSIDDFGTGYSSLNYIHHLPIIELKIDKCFVDDIKN
ETDDVPIINTILQMAKSLKLRVVAEGVESKAQLNYLADHGCDVIQGYYFS
KPLNSTQWLDKWKEKLSD
>CPS_1889 conserved hypothetical protein
MKNKFYYLFLWLSCCSLFCSTTFARSYDDIIESNEITVAVYSDFIPFSYQ
ENGEAKGIDIEVAKHIAKQLGVTLHFRWVTADENVEDDLRNNLWKGHFLK
RSVADLMLRVPYDKAYSELRDDIGERVHEQVHMFAPYHTESWKIVFNAKK
IDDVSTMAVFQYHDIGVEVDSIPQFYLLSVFNGRMRNKTKQFPSLALAIS
AMSEQKIDAVMGLRSQVSHYQHQLDSSTYQLATNAFPMLGKQQWDIGMAV
KSDYRQLGYAIADIVEAMVSQGQMKKIFDQHHAVYQTPNLYSVSDK
>CPS_4261 DNA-binding response regulator
MNTKPLIYVIDDEAEICDLVCQELERYNFSAQAFTTGEQALLAIKKQLPS
LCIIDLGLPDMDGLSLVKKLFDDKKIGVIILSGRNSLPDKVLGLELGADD
YISKPFDPRELVARVKSIIRRIVVNESPITSLHTASFGDWTFEQSTLTLA
NNKGDSFMLSAAETEILMVLLNAPRQILSRERLLSEDATSFDRSIDVRMS
RLRKKIEHDHKNPKIIKTVYGAGYIFTLEVTWQ
>CPS_0721 EF hand domain protein
MDLNQWVDELFEVFDEDKDGVISRSEFVELIDVLLQDKGIRMCETIFNRF
DKNHSNSISKDELKDMVIELAL
>CPS_0541 GGDEF domain protein
MQSLFLCVFISISVGLITTSPQAIAESFQYENDQTDVLKLKFSSEYISEK
LLIADRNRRENPVLYKKILAELAPLEKSFTRDQHSYYQFLQGYLAIYHGD
YEQADKLLSEVLNSSADKLMKFRANYTLINVAAAKKDWSDGLRHIAVNKE
MLPSITDKEHYQLSILTAVIFYNQLQQFDLVLKNIAQVKRDNLPQEHNCF
LEQFSLEAKLNLQLIKPGDKSIDNGLDICQQAGNKISTNIIRVYRAKLYL
KAQQPEKALAEILPYYDEINTTLFPMLIAGMNNTLAKSNYLIGNIKSAEK
YALAALRANKNNTIIKQSADSYKLLYQINKSQKNIALALSYHEKYNALEV
AHLEDEKSKHVAFQLAELKTFEHENQIILLNEQNTFLAAEQALSNIKVAN
IQLIITVMTLIIIMLIIWGARLWRSHKRVKALSEYDELTGIYNRRHFTQI
AVSTLKYCQSAEQDLSLIMFDLDNFKKINDNFGHICGDWALKETIRVCET
IGRKNDIFSRLGGEEFCILLPSCNIEVAVLRAESCRAAIENTITEESGND
FSITASFGVTDVARSGYNLEKLLIDADFAAYESKHAGRNRVTVFEPQEDE
TGKSLGNSWSVAP
>CPS_1996 transcriptional regulator, Crp/Fnr family
MTLSSKTTKKNTSQHKHPRYVDCDNCSMRAICQPIGADNQAIDLTSNYLT
RRVEVSTEQSSSLPLNQSAGVALFEQASPLTAIFAVCSGTFKLCQKNDDG
LDRIVGFRFPGELIGEDALFLEVYNYSAVALGDNSVCEVYVDSLSACSQL
APELQQNLIQLLTKQSYEQQRNAHAITGKKSADCLLAAFLLNICQRNAKH
SGNETEIELTISRQDIASFLGMRRETLSRLLSKFQHEQLISLNGKQLSLL
SLNHLKQLSNQ
>CPS_4117 sensor histidine kinase/response regulator
MHKISLKDWVIILTIIPTTLIGFGLASYFSYSRSVELNDFLEQRAKSIIE
PIAIASKDPLLSKNRDKLRQLIGFTHRNQSSIVKSIVIFTEDNQVFVTSA
YHGDTNLMRLKAGVELPHHTNTETLSDYIIFRTPIIDENYNNQSNANITA
MASSEYNYATNNSKPVIIGYIAMQIDKSHLNFQQQSQFIVAFAFALLGSL
LSAIFAIRLIKKVTKPINSMVQAIERIREGKLESRVSGQLIGELNFLKNG
INAMAQSLDGYQNEMQASIDQATIDLRESLEQFEIQNVELSISKRKAQEA
NRVKSEFLANMSHELRTPLNGVIGFTRQVLKTPLTENQRDYLQTIDRSAN
NLLTIINDILDFSKLDAGKMVTENIPFSLRESIDETLTLLAPSAHKKNIE
LSINLPQELPDSLVGDTMRIKQIITNLVSNAIKFTPQGSVAVDITSEEIS
QNNIKLKVIVTDTGIGMTTNQQRTIFDAFTQADQSITRLYGGTGLGLVIC
QRLAQEMNGDIGFSSEKNHGSSFWFTFQCEINAMPLMLELDNQHLANKTV
LYFEENNHSREATKNLLKHWKMRVTSVINRHELSQVLSHSSQTQRGFDYA
LIGHNQTATALSELKKTIAQVQPISSNIHLALNNTSPSLQEALIASGAIS
CMSKPLSPTTLSRVLQPVMETKAEKLTLNAAMDKVLPIKVLAVDDNEANL
KLIKALLLEQVAEVVEADNGMSAVELCKVENFSLIFMDIQMPIMDGISAL
KEIKQLTNNNNTPIIAVTAHALSGEREKMHQQGFNAYMTKPIDETMLRHI
IYEYCDFDHLVNSTVPVISTDVINQVESASKVIDWPLALKRSANKADLAK
EMLLGLVESLPETQLSIREAIDVQDIAQIKRLVHKLNGACCYTGTPNLAK
ITIQLETQLKMGLSTEELEPEFLEFFEHIEQVLFAVPEALKEMSENSH
>CPS_3951 response regulator
MVENPSDVTLLLVEDDDVDAMTIERSFLKQRIANPIVRAYDGIEALELLR
SNKVSRPLIILLDLQMPRMGGIEFLKELRADENLSELVVFVLTTSKSEED
MLSSYRQHIAGYFVKGKSGAKFLDIVNVLDSYWKVVQLPK
>CPS_2731 cyclic nucleotide-binding domain protein
MHMEDFIQFFSGSNLSIDKANFDQFGLKAKIKHYQKGQLLITQGQPAPKL
FFLIKGMVRYMSVSATGKEFTQSFAFAPGISGSTRAMTRNANALFSIEAL
DDVICLEFEWHVFFDQMQSQPGFLAAYNRLLENMFIKKEEREFAFVQQSA
EQRYLTFLDMNPQLRDKISLKMIASHIGITPIALSRIRNKLK
>CPS_1939 sensory box sensor histidine kinase/response regulator
MFASIFSLAVLGGISYLPLFEFFLSIDEGFIPMAPSTSALLLVTFLALFI
WVNCTRQFYRYKKSIGLMLLIVSLFGLLEIVEYFTGVELNFESYIVPNYG
DLNGVPIARMSPVTGLCFFLTSCVLFILLNHNKKSDVSHFIGLIKNSFTT
ILSLISLLFIVTYLYRSPIFYNTQDIIPMALSTSLGFLSVSGVLIVNDNK
NYFMKTFTHLSPSTALIRFITPFTVFSVFITGLVQHFMFAVSSVNNSIFL
STTILILFAVICGFIAMLVTKKLMSFQDESNKNLHQYKSMVTLSSGMQAL
LDDKFVYLAVNQAYAEKLNLTIDQVIGKHPRDIYSKGYFESELKIYSERC
LAGEIIKLEKWMRSSSGQAWFIDIEMSPYYQNDGNIYGVMVNARDITELK
HYQDNLEKSKLVIENSRVIAFRWKPDCSVEHVSSNVDLLGVKASDLLSGK
TKYTDMVHPQDLARVMQEVRSFTEKGVKQFIHEYRIVSPSGAMYWVEDRT
TIERGEDNNVAFYQGIVIDITEKKQVELKLKQSNAIIQNVINSTPDLIFA
KNTEHQYILANNAFAHSLKQSSQSLIGKTDQQFNYTDEQINNFKMQDEKV
LHGSCVITPSRRPLDGNKVLETSKFPLRNENGDIGGVIGIGHDVTEHIAN
LAKISKQQKELSQTLDAIFDAVITIDESGLILSCNRATELMFGYAAEELV
GNNVSLLMPEKLAAQHDEYINNYLLTGENKIIGRGRELVGKNKDQKAFPL
HLTIAELPKNKDERKRFVGVCHDLSKTKQHEKLLNRTQKMEALGQLTGGI
AHDYNNMLGVIIGYSDILKTQLKDQPGLLNFVEQIHQAGDRGAQLTRKLL
SFSRQTPDASQESDINRLIKNNKDVLRKTLLSVDLRLNLDDAIHKINIDR
NSFEDALLNMAINAMHAMPHGGVLNLSTCEVELSKEQAANFNIEQGKYVQ
LSIEDNGEGMSKAIQDKIFEPFFSTKGDQGSGLGLAQVYGFIKSSMGAIN
VYSELGSGTRFSLYLPIPKQDYKAENKVEDKEEQSSVFGNETILVVDDEP
QLRALAQTILAAKGYRVLTATNGIEALAVLEENSIDLMFSDIIMPKMNGY
ILVEKAQKLYPELKILLASGFQGNQIDNNIILDEPIIAKPYENKCLLRII
RECLDKQDAKTIQGSNQNNNLIVPKSSPIKRIIWTNEMSIDDGGELDEDH
KFMFSLLNRCQELLEEQDDHQSAQAIITEIVQYTQDHFVNEELLMNNINY
PYAKNHCDVHRMIAKQLSKKVLVCSDKEILRWLITDMSTWLVEHIMEMDK
PLHKYILKHKEQVGSGLKGNTEGYMYDE
>CPS_4383 TonB domain/peptidase M56 domain protein
MFEQLFNSPFLYSLSLTLVHFLWQGLLVALILKSLLYIIDKNKSKLRYTL
ATFAMLSNAILAVLTFTMVYPDTSSGINSYLSPIPLTSLVNELTQQNALF
TYQELLPSILAYSLPYLSLLWLATIAILSSKLLIEIRNVNNLPLHSSISP
SLALSARFEELAKQIKLAKTPRLLISLKAEVPMAIGWLKPVVLLPASMVT
GLNAAQLEMLILHELAHIRRHDYLVNFLQTLIELLFFFHPSVHWIGKQMR
NEREYCSDDIAVQHCGDAIAYAHTLTDTASLCAKNHFHTIPTMAMAASGG
DLKERVLRLVDHHCAPTNNTSKWLAAVSLLLALALLSMNQLLTMPFAQQL
NNKFPWQEKNSINSNIASTTIAAMNFNKDNTSNRNTTLNNDSIAQQLLHR
EETLPDASVVELENNQNAFAVKSKNESELTTAIVEPLAISNYQDTIKAKE
TAQINRSATISSTKQITAGDNEVLTALRVKVQRDSRTTPQLTSAKSDLNV
AKNSLSSTTNLQPLAIEKSQPQLILSSISADKFTAQPAIINSSQEGNMQL
SLLNDKALNSKKDSYHKLAYNQEVNKLAEQSELYKASNTVKVGKASEIEP
SKQEVLQMPTSFEAKLLNSINPVYPSLAKRRGLEMEVQVDFIIDRDGKVK
DISFAQQSKLIYFKSAIRSAIRKWRFSPATINNRKVESKMTKIFSFSLHA
>CPS_1261 sensor histidine kinase
MNINLKLQLVTIVPLVLALVAVLIVTQVQYQSLSEQTVYEYRHSVMSHRK
DELRNYVALAEGATEHIYKNKNLSNEQAQTLVKQVLSNMRFGKDGYFFAY
NFDGTALLIPGQEWRIGKNWLDLEDRNGVKLIRGLIENAKGGGGYLNYVF
NQPSKGGEVGKKIGYSRELEDWQWMIGTGVYIDDIDQEIAVLNASIGKHI
RNTSVMTLIIGLVAVIAIFFTGQFIRFSERKLANRKLRELNERIFQTQEE
ECKRVSRELHDGISQTIAAARFSLETAQLKHQNNDDASNEMERSMELICK
IMGDIRAISHQLHPGLLEDYGLGAALEELGRDFSQRTEIQVDVERLSLRN
ILSTEVKTALYRIAQESLTNIERHANASKVSISLKLVPNWLVLEIIDNGQ
GFDYQRYDKSRDKKTKVHQGIGLRNMKERLSFYQGDLTVKSEHGGTKVSA
RIPQSQLRFNASNASEN
>CPS_2277 sensor histidine kinase
MVIFVNWKELLENRSRLFWLAHTAGWFGFAFVHYLGSLQHDSRDIFVVII
FLNAYAGWLFTVPLRYIYRKAWNFPPIKIALVVILSSYFTGVLWQIVKNI
NYWEIYKHGYEPEFWFMYTQNSLGSFYIILSWSGLYFGSKYYQMLQIEKQ
NVLKANAVAHQAQLKMLRYQLNPHFLFNTLNAISTLILIEENKTANTMVT
KLSEFLRYSLDKDPMKKVTLESEIQALQLYLAIEQVRFEDRLQLDFQIND
NCQQALVPSMILQPLAENAIKHAIAVQEQGGSITISVNRFADDLLIEVAD
NGPGADIINGNLHRESGVGLVNTRERLQALYNEKFSLVVSNNQPTGVKVN
LRMPFQLS
>CPS_4948 sensory box sensor/GGDEF/EAL domain protein
MSSIRAIVKAKNTILFKFSFGMSLLFLVMTAATYMVVDLVVKNYLVNKNK
ESIDEIGSHIVSEISQRISIAETLTRHLAAAGETWPQDPQLFYKVIPQML
NMKEYQDIIAGGGVWPEPQQFTLGVVRRSFFWGRDNFGELQYFDQYNDVE
GTGYHDEEWYVPGRYSKQGECLWSKSYMDPYTLAPMVTCTVAMFKQEVFS
GNATVDVSLQQLKSILHQGSAKLRGYAYAVDRNNKFLSFPDDELTKVANR
DSNHLTQEYITVNQLAEKLESFQPIAEILTEINQSLIQSIADKTRVPAAN
ITEQSKQISPLDAQLIVANMSTMPDQSSHRNTKTISVISKQDFLLGEAVN
VSVFIIPKTLWKVVVVTPQMVAINSASKVSNLILMLLIAIMIIAAFLGFI
YCRRSLIMPIYQMVNQLQRPVTEGGQVYPELLDDRRQDEFGLLAYHFNQS
KMALDSNNRDLKLQINERKQAEYQLKHLALHDPLTGLPNRLLFQDRLEQA
IALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRK
TDTVARLGGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMG
SSIGITIYPDDAANSEELLRNADIAMYQAKDDGRNTVRFFTSEMNARLQR
NKEVLTDLAESLTKEHFELYYQPLFTIDQNILVGAEALIRWHHPEKGMIP
PDQFIAVAEKSGLINELGDWVLAQACREIKNFLNAGITVFKVAINISPVQ
FRRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQALHDA
GFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLENDDDSKSITTAI
IQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASEFIKN
FSESKKGKYANGVWTESTTMT
>CPS_4859 putative cation efflux protein
MMKHTKNLISFSLAFLIICASILAKPVQARVLVVASDEWCPYICDDTHLP
GFLVEIVTEIAASNGVKVKFSLTPLARALDLTKKGKIDILLGLTSQHIGD
FQLKKSHLTFGGLYNDFYVRASDPWRFKSIADLEVALKSNAILGTINGYE
YGDSIGRLLKDNTAHIFSASGNSPLQKQLKMLHLGRLDILLDSRFTVQYQ
LSKLLRKSAQLKISTRSEPSIVYAGTEGIFTPLFLGFSPLLSKKYVQLFD
NGLTSLRENGRLNKILEKYGVTDWHQQSVTFQDEELSLLLEG
>CPS_3982 DNA-binding response regulator
MSKRIAIVEDEAAIRENYADVLRSQGYQVQTYADRSSATQAFNLRLPNLV
ILDIGLNDEYDGGFVLCQQLRAKSATLPIIFLTARDNDFDTVSGLRIGAD
DYLTKDISLPHLTARISALFRRQEALKKPINDDHITRSGALTVDSQRMSI
TWQNSSIDLTITEFWLVHALAKNPGHVKNRTQLMTDSKIYVDDSTITSHI
KRIRKKFMLHDNNFDCIETVYGMGYRWLSTNSIADEEG
>CPS_4654 sensory box/GGDEF/EAL domain protein
MTEIANKETQLQKEIEQLRSELVAAHLSKDVRTAELLNSEERFALAMRGA
SDGLWDWDLATDDVYYSPRWKSMLGYSEHELENTLSTWAAMVHVDDKDFV
LKNVHKFLSGEVDTFEVEMRMRHKVGHDVFIRSRAFKVTRGENNETIRLI
GTHVDITQQKKSEFFNERNTKILELIAKGKPASKIYAEIALMYEERHSGL
RCSMLELKGGKLLHAGAPSLPKSYCKAVHGLEYGPQVGSCGTSTYTGKRV
LVENIATDPKWADLKYVALPYGMRSCWSEPIKSSSGKVLGAFGMYHDYPA
LPNEQESNDLTSAARLAGIVMEREQNQKRIQNLAYTDELTKLSSRPHFYI
NIEELVKISAREKNKFGLLYIDLDNFKTVNDSLGHDVGDLLLKKVAQRLK
SACREIDYIARLSGDEFCIAVNNVMDDYGAAHVAQRCLELISKPVELAGR
KFTPACSIGIAHYPDDGIDLQTILKAADTALYAAKDLGKNRFAFYKKELT
DKAEYRFKIEQHLREAIEQQQLSLVYQPKVDIKSGNIIGVEALSRWNHPL
LGQVSPVDFISMAEQIGMIKPLTEWVLKTACNQATLWKEAGFSSIIIAVN
ISPSHFLDSDLVPLIKRVIKETGMLPGDLELEVTEGVIQTNPENLAVFEH
LKELGILLAIDDFGVGYSSFASLKHLNVDYLKIDKYFIDDILVDHKAKLL
VGSMIEMGHNLEHKITAEGIESEEQATMLQELGCDYAQGYFFSKPVSANQ
ISKLLGRKLTGQ
>CPS_4518 PhoH family protein
MNNENMLSDNSTQTSQINETIDQPIIYILDTNILLHEPFAFLSFKEHDVV
VPMTVLEELDSIKDRRKDVSRDARVAIRALEDTLRDASPEQVLAGVKLPQ
NDDQHPSGSLAIINDYALEKTAHTLSFNENDNRIINAALHIQKKTPNKKI
VLVTKDINMRLKAKGAGLAHVEDYRTDQLIDDIQFLTKGYHKFEGDFWQQ
IQSVDSETEGRNTTHYVSRETVPSTYINEYLLDDSGTFAGKVTGWDDDKL
AILDLGRERLLAKNAWGIHPKNIYQGMAMDALLDPTIDLVILTGPAGSGK
TLLALASALEQVIERGLYDKIIVTRSTPEIAESIGFLPGTEEEKMAPWLA
AITDSLEVLHQQDESMHGSLNYIMDKANIQFKSVNFMRGRSIQNALVLLD
ECQNLTAAQLKTIITRCGEGTKLVCSGNLAQIDSNYLTAVTSGLTYIVER
FKDFPGSATVNLNGVVRSRLASFAEENL
>CPS_1277 hypothetical protein
MKSIFFLFLFYSVALMPLYGKASDRVLAYVERIPPYVLISNNNITGSTID
ILNEALKESDVDIHYQEINWSRALHDSESRPNIILTGLNRNAFREDKFHW
LYKVPVHTSRQRYFLWQLKSKSAENKKRGLKNAFISVMQGDHKSKSYKSY
VEGLGYQANIYPVGSREQVIHMLFKGRVDYILGGELNNAWRVKGLGYDPD
MIERVVEVPNTSQGLYIAIGKHTDIKFVNKIRKALADLEQSGRVNEIMSL
WLKKTEKTSPSENTQTKRTVDE
>CPS_4704 sigma-54 dependent DNA-binding response regulator, Fis family
MKKEGKILIVDDDEDILTAGKLLLKRHFSQVSTCNVPEHIPRFINDQHFD
AIILDMNFGPGESSGAQGFYWLQRILEIKPESVIIMITAHGGVNVAVEAM
KLGATDFIAKPWQNEKVIATVSTAVLLGRSRSETQKLRETNKVLVQASNP
ASQQNMLGQSQAMQQIQSLIARSAPTEANVMILGENGTGKELVAREIHQQ
SARAQQVFMSVDLGAISETLFESELFGHKKGSFTGAQQDRVGRLQAADGG
TLFLDELGNLPLHLQAKLLTVLEQRKVTPLGANKAIAFNVRVVSATNLSK
ETLKDEQHFRQDLLFRLNTVEINLPPLRERSSDITLLASHYVDFYAKKYQ
QQGKGVKQLSDDALAAISSYSWPGNIRELRHAIERAMILSQSEMLTSGDF
QLDVPSHVKPSQSASTSKHKVITNQFETTSAEIMLPEELNLEQIEKNAIA
LALKKHRFNISHTAKELGLTRAALYRRMEKHGL
>CPS_4927 methyl-accepting chemotaxis protein/sensory box protein
MTKRNQPLINEEVNFQSGVELISTTDKNGVITYANPEFCRIAGFSLDELI
GQHHNVVRHPDMPSAAFKDLWKNLQSGLPWRGVVKNRCKDGRYYWVDAFV
TPIFEFGQLVGYQSVRTRLDDATKKNAISSYQALQKGKSLTKWYQNTTIK
NLVYWSASITTLISAMYYPYMMFLLPVLPFITYKNEIIDTPKYLKDLVRD
YDSVSRLIYCGTKPQGIADFHLKVAEGKIKTILGRIIDSSNLLSSGATNL
EQAAQIAKEGAEQETTELHQVSTAVEEMVATIDEVAKNTTLTSQKVNQAH
SDCQIATEAMHLTMEKVNLLAQDVADSASSATELASEVEKVGSIMHEIQG
IADQTNLLALNAAIEAARAGEHGRGFSVVADEVRALSSRTHAATEQIQTS
ISEMQSTLLSWVQTMTKGKESAESCVEKATEAHNVVDKVYSSITDISDLA
IQISTASEEQSMVSQEISRNIMNISDASQNNLHQANTVESETINIKTRAN
ALGALGQAFNG
>CPS_0937 DNA-binding response regulator, LuxR family
MSQAKVIIADDHPLFRTALKQAIIECIDDAGTLEADNFSELLIAIEATPS
LEIVFLDLHMPGNDGFTGLTQLQNHYPDLVVIMVSSDDNDETMQKAINFG
AAAFIPKSADLTTIASAIDTVLMGDIWLPELIEKNAGQQTALAHQKLAKQ
LGQLTPQQYVVLTQIADGQLNKQIAYYLNIKETTVKKHVSAILEKLEVNN
RTLAGLAYQQLMLSPTENVNSPI
>CPS_2484 GGDEF domain protein
MYNAQLGIGILKYVNTMTKYSALLVLFLFSMIANSINAQPFVALDNRNKI
ELNEHDLWFKTQSLDTNPSFLALSQLHQNANRVTSTFGGSGAYISKIKLT
NTKGQKDTWFVNIHAVYLDIGTAYWQPEHGEPIVLESFGHMGSENPKLAH
SQAFSLLLNQNESGTLWVYIQAKMFATPVVVELYSKKEFYKKQFITNSIS
TISFTVMMTLALIAFFIYLRTKYLVTLACTGYIGIQGLGWFTASGSFGHL
LTVSAFNPVYSGIIIFPFAIASASQFTKLLFNCPQKHPKLTLTFNLLSIV
CFSLGIIMPFIPFTQSFLISHIIATIWIPLCIGTGIFMLAKNDFRAKYYL
IGNLVYGFTLAGYILSHLYKIDWNISLEVIVQIALTIDCMCILLSLSEWL
QIQQKEFHRSYAISRIDPLTQIGNRFAQNEKLASLKGPYCITFIDLDGFK
KINDKLGHEEGDKVLIATANIMQKKLQELGSIYRCGGDEFIWVVDIENVQ
QTEAIITKLSDLLLQTEKELQHRGWSEAGLSFGIATSFETLNQSECLSLA
DQRMYKYKQDKKSIKGLAACS
>CPS_3271 DNA-binding response regulator
MINVLLVDDHHLVRVGINKILTSVKGLKVVGECETGEEAIKFCRNSEPDV
LLMDMDMPGMGGLEATKKILRFAPDVKIIVLTAHTEDPFPSKVMQMGAAG
YLTKDAGPDEMVNAIRAVHSGQRYLPSDIAQKMALNQFKSVEDNPFNTLS
DRELQIMIMITRGDKVPAISEHLNLSTKTINSYRYRMFEKLDVSNDVELT
HLAIRYGMLKTEKL
>CPS_4527 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
MAIYLVGDIQGCFNELSSLLLQVNFDRNNDVLYLAGDLVARGPNSLETLR
FVKSLGESAKVVLGNHDLHLLSVHAGIKKAKKSDNLSALLAAPDVNELMD
WLAAQPLLQEIPNTCSNSNAINQANNNSAYMSHAGISPQWQLSVALEQAK
FIQTKLASSDRNTWLALMYGEKPNDWHQAITEIERFRYSINAFTRMRFCF
TDGTLEFEQKDSPENITLTNIVPWYELSQTINNTSWVFGHWASLMGKSSH
PNIYPLDTGCVWGNQLTMLRWHDKKYFIQSSELSD
>CPS_2475 sensor histidine kinase/response regulator
MNFPNILGLRRLIRYPKDHPLSYRMMVYTTLYSFVFIMLSTAVQITLDYR
REMRNIDQQIQLISTSYIASLARSMWDFDQAQLELQLKGIKALPDIASLE
LKDHTNKTLIRLPEQVVEGKVMKSSFGLSIPNKRVGNNDSQNEQSNRRQL
GTLIIATNLATIHARLWQTGFNILLNQTLLVVLIMLVIMFILQRLITRHL
ESMAGYSKAIGDGDLEAPLTLSRRQPNFPDELNQLVNALNDMRLAIRHDI
NRREEEKQALRYNRDQLQQMVERRTMSLQQAKEIAEEANKAKSQFLATMS
HEIRTPMNGMLGMIQLLQNNELTDPQSHRVKILHDSTEALLETFDHVLQF
AQLEEGGYVCSESFFSLDELLHNLISLMQPKADEKHLQLKLDTPVTGDCY
HDAAGSLRQILTNLLANAIKFTDQGEILLRVSHLEQSEHQHRLRFSIQDS
GIGIEPALQQHIFERFTQADESITRRFGGTGLGLSICRQLSQEMGGQIGV
ESTVGQGSTFWVEVKLKVAKASEFKAKAVLPELPLLKILLVEDVEINQQV
VLGLLEKHQVILADNGHDAIGTANRETFDIILMDMHLPGISGLDISAKIR
ENDKCCNYKTPIIALTASVRPDDIQDYFNAGLQDVVAKPVKQQLLLEAIE
RALDPQKPKLSKVIQQVDTTSDMPLLDLSMIETHLQILGPAKLAKLMESF
CKTQQQLWPALKQSLASDDHYEVEHQAHALAGACDMLGFVKASNLLRQLE
QNAKKGTIKQVSQLLLQLNPIMEQSLAKAETYCS
>CPS_1315 conserved hypothetical protein
MHKDVSQLPQKANPALVKQANLFADLPTKLIEDFQQEFQLNQWNKGDYIN
SDILTQRFFVVIEGNIEIKQSNPDTGREATLDMLYAGDCFDLMVLLDNQP
HEVIISPLTTVKLLSVKLSTMRYWLWTYPEFNQQFMPYIAKKMREKEQQA
SSLILHDVTTRLSRIILEHINKIKFYTGTKEEEHQHHLVNGLNDETLARM
TGSVRQVINKQLQHWKKEDVIDKKRNQLIIKDLEALEKEAKYTQNLANAP
LSKS
>CPS_4497 histidine-containing phosphotransfer (HPt) domain protein
MFVETKQSNPDLDLELLQGYLDSLGKVIVEQMFALYCQQVEIYLNDIENA
QLNDSLSGWQNHCHKMKGAAASVGMYQLHGQLKLIEKAEVSKEKKSVLLK
ELRLLNDQAVFAFKNWLETI
>CPS_3671 putative serine/threonine phosphatase
MNYHIKSLCHQGSIRDNNEDAISYGIHKELDVVWMLIADGMGGHNAGEIA
SAMLVDHIKYAWGKVSITKQANWLTWITEQLNAANLSIFKQAKNTVGQQG
MGTTGVLMVIENNKCHLGWVGDSRAYTLKNKNLVQETIDHSMLQELVNKG
AISAETAKSAKTKNLLSQAIGVREKISVDTATIAIESGDTIMLSTDGLHD
YLTDREINHYLSEFSTEKNVCDDMVEQAIAQNSRDNLTVGLIYLNN
>CPS_4787 sensory box putative digualylate cyclase
MKYLDNNLLLNSVIDLIDDLIFYKDKHFRYIGCNTAFLNFVGKKAEDLIG
KDDFEIFDHDLACLFRKHDKLMLAEGSVRSNEEWVVYPNNNKVYLLTKKI
PFVYDGINTGILGISRDITSLEKANQQLKQQTLLDELTQIKNRKAYNLKI
KSLLAVFERYQTPFSIISIDIDDFKNINDNFGHDVGDTVLRSFGALIEKN
IRETDHLFRIGGEEFVILSESKTKVDAIQLAEKLRKIVAFNTILTDINIT
ISLGICEVTTGDGPNSIAKRVDNLLYEAKSHGKNKVTYHSVT
>CPS_4411 GAF domain/GGDEF domain/EAL domain protein
MQARYTALFKLNQLSQECNDLDSFYPQVHTTIASLMTAKNFFIVLYDQTF
ETLEFVYYLDEKDEKPSGIIDYQDYDGSFTNLVIESKQPLLLTPELEKQL
FDNYKIKQFGVRGTDWLGVPLLQNGLVIGTITIQSYDEKIRYNESDLNLL
TFAAQHIVGAMVRLQDQQRLKNAVNARTKELMAQIREREKSELLQESLYR
ISELTTDIELDIDTFYSKVHNIIGQLINAKNFFIAKYEKDSDTLSFSYYV
DEKTSNLAKDFKPRKLSNRYSELVLRRRETVLLTYQEMMSLHLEGETKKP
QDDIHSWLGVPLIYSGQLLGVMVLQSYYYKTTYNQQDAELLNFVSNHVSA
AIKRRELADFERRSHELLEQQVKLRTLALEDEITHRKQAEKLLKHTAAHD
SLTGLPNRMVFLDLLNHAIACAKRKDDFSFAVLFLDLDRFKVVNDSLGHH
AGDVLLKIIARELLAIVRKVDTVARLGGDEFVILIEDLKSNNEAFEVAQR
ITAFLQQPFTIDNQLVYTGTSIGISFSNIRYTDADTMLRDADTAMYHAKD
NGRGRYEVFDDSMHQKVQNALSLEADIREAITWQEFIPYFQPIIKLDNQK
LKGFEALARWQSTKRGFVYPNDFIPLAEETDLIKEIDIQIIEKSCQQLKC
WHDELGCDDLYVSCNLFSKQFFSTSLPQDIEKVLKRTGLAPHHLRVELTE
RALLENAEIVLTNMQALKNMGVKILLDDFGTGYSSLGYLHRFPIDVLKID
RSFISNVDEHNNNRAIIRTIVDLANNLQMSTVGEGIESLADAELLQQMDC
VYGQGYYFAKPMSSQDTKDYIIQKLYYSSSE
>CPS_3981 sensor histidine kinase
MANGKRLKLRFGLRSKLLLLSSFLFVIPWFGYQYVWEMEKYLRFGQEQTL
VGTARALATALHERENLFNNQASFLPNVEQGKDLYGYKLTEAVNLDGLPN
DWPDFNQRTHFYNQQQQLFANEPLSLNFKASVGKYNNYLYLFFQVVDNRL
IFRGENTRSITNNDHLALSFSDTNNKLNRFIISNKKAGWISAFALTDDET
AIPAPAPQIQGHWLPTSQGYNIELRVPLDNLGDNIAFAFYDVDKTNSEAV
SAIGSADPSKEESLGTIVVPSPEIERIVKGMRYTNSSIWVVDQHHRVLAS
AGSLNSASGVWHAKEKQPKEGEKNSLWYQFKQQLLLPLYYKILTKPSTDF
IDQLYDAQHLQGSHIVNALSGKATSQWRLTTDKKALVLSAAYPIFINNQV
KGAVIVEETTNGIRSLRNRALEKLFTVILAIMSLGALTFILFASRISSRI
RQLSSQAELAIDKQGRIIGQMQASNSNDEIGDLSRSFTTAVNRLSEYNHY
LENMSSRLSHELRTPIAVVKTSLDNLSLLETQQAQTGKTNNPYIERAQTG
IKTLNLILTNMSEATRLEQMLSSTEKIDFDLQQVVKGCISGYQQIYPTMQ
FILNIDVKALNASTFLLHGSPEHIVQLLDKVVSNGVEFSQDNIITIELKK
SSNKHNAELLISNNGILLPEQLSESLFDSMVSLRDKNQNAQNKQVVPHLG
LGLYISRLICQFHQGNISAYNHQNPAGVTVHISLPTKV
>CPS_1288 sensory box/GGDEF/EAL domain protein
MQFPSIQLLNLIPDTVLIVNKKAEIIWINNNITNLLGYLPDELLGKSIEC
LVPSRTREKHVNLRNSFINKPNKRSMNQGSGLWAVHKKNHEIPVCIDLNH
YEESGEKFTVCSIRLLSEQELVASTMQKLHERLEFSQSLAHVGTWDWDIT
NETLAWTDETYRIFGVKPQEFKATYEAFLFYIHADDRQAVIDAVNDAINN
DSSYSIKHRVIRPSGEIREVLEKGQVLRDENGKASRIIGAVLDITELNQS
KEKLEKLAHYDEKTQLPNRVLCRKEIEIRISHALLNNKKFAILFIDLDHF
KNINDTQGHLAGDEFLHEMSQKLLTIIPKGMFLAILGGDEFIIITDYSDD
EEEIKNKVTRLAKQLILLIPTKKSYENFSIDITASIGIALYPNHGNNFTS
LLSSADNAMYQVKNTGRNNYAMYHPDIEQKRLRELQLISDMRTGLKKGQF
TVHYQAKQSLKTDELIGCEALIRWQHHTLGNIPPLEFISLAESSGLIIPI
GKFVLEQSCLFIKQWQAHSDKSLVVSVNVSALQLKDPLFKEEVLQVINSA
GISGHNIELELTESLLMENIEATIQTLHDLKEIGVSISIDDFGTGYSSLS
YLQKLPVDTLKIDKSFIDSLSSSDEDTWIVINTISLASGLKLKTVAEGVE
TQEQKSILADLGCDILQGYLYSKPIPKNEFFMKFK
>CPS_2713 sensor histidine kinase
MSSIKSSLVKQLTLIISVILFLVLLFLDISVDTYVERQFESALVQEGKRL
INHIDVENGKISLSLRADLMEEFSAKKLGKYFKIWADNKVIIKSASLSNY
PNFNVPEVKLKSNEYLIKSIELPDGRSGRIFIYNVGNAKKYNTNYQSDIY
LGLTNVSESLESIQILIDIVFLLTAIATAFFIRYLVNKIVSQGLKPIEKL
NQQIRDINFNDENACFDIISPPKEIKTIIDELNQFLMVNRSLLQSEQRLT
SDIAHELKTPISELMSVTEIAIKYPQNKEVLATFKDDVISISMRMNNIVK
SLLMFNKTNSKHFVLSTTEIDLVSELHGLIERFHSTSNESQSRINIESPA
SLLIQSDYFCIEAILTNLINNALYYSPQNTIVDIDIHTSEGTTALLISNQ
LSVAMNDNDLNNMFEPLWQKDQSRTSEDHFGLGLSIVKRLCRQMDMEISV
HLKSEKVIEFMLVFDQESECVQHEVTNGR
>CPS_4294 putative chemotaxis protein
MNQFHLTEDQQDCLQELINIAMGQASDQLARYLDTFVYLKVPSIESVEAK
DLMKTLSQQKNTVAVVSQGFFGYEGIRGEALLVYKEENSGRIADLLGYEP
DELSQDEQLIDISSILTTTFLNVFAQQINNQLSYNAPKLLPNVQEILSEH
LQQMPFTWDLALKVNINYQVTDYSFNCNMILLIPETAITNIKHVLDRILE
EF
>CPS_1138 GGDEF/EAL domain protein
MQRDAAALLYGNAVSGIVISLITSSFLVFMFSNPLTDSFKHMWWWGMSIL
LVLRMVDVIIWKTKLQHTDFDGEKAVKRYITGVNPTAIMWAIYLVYITKY
NSSVELTTTLIAIAAMAGGSATILAAHKYTAMFYAFILLSPASIGLLLSD
QHALQLLGFLGVSYSIVMLITSKKSADFTRNTLFLKNENKVLVHQMEEKV
EQRTRKIYELSNLDSLTGLYNRTAFLKHLKTALASSNKPFALLFIDLDGF
KKINDSIGHQAGDQILKKSAERLKQWSFDTKLLCRWGGDEFLMVLADTDE
VSAVGVSKQLIEVLSAPHNTEHSVLSVGATIGIALYPEHAKTEDRLIQSA
DMAMYYQKKQARSTVGVFSKQMDKLYSYELRLKNELTQSIEKEQLRLVFQ
PIISSKNDEVVAFEALLRWQLDEENIPPDDFISIAEQYGLIHKIGAWVLR
NACLQASQWSSEQPLSVCVNVSVIQLQDENFIAIVDDALSNSTLPGDLLH
IEITESVFAADTSIISNQIKRLQARKIKVSIDDFGTGYSSLSVIQDLAIN
MVKIDRSFVNKMNTNGHAIISAVMHIASSLDFLVIAEGVETEAQARELQK
LGVHFLQGYHYSKPIEIEDIDSYLTNMTLDKQYLLNK
>CPS_2817 putative regulatory protein
MGNVSQLFGKDNKQQDYSIQEDSIQDLACLWISRMDRGLSASEQQELVEW
CKQKTQHHNALLEMASYWDDLSVLNELSDLFPLIQPKVGNQRNKFSAIAL
AASVAIISIIGLNTFVNESFLPYLPSYHEQTLTQTQTLKTQVGEQTSFTL
QDGSQIQLNTNSLIIVDYSPTQRLLTLVQGEARFDVAKDKNRPFTVTVGE
KSFTALGTIFNVQRNNNQAMELVVTEGKVLITKATTSITDIKDTLLSVST
AFMPDILEATLVISGEKAVIAENSAPITKTPVEKVSLDQINRDLAWQQGM
LIFEGEPLSMALAEISRYTSSNFEIVDSKLSELTVAGYFKAGDIDGLLTS
LQSNFGIIYRKNSSGTILLSSAE
>CPS_2786 response regulator
MRILLVEDDQGLAEALQQSLVREGFVVDHLSRGKLALTALAVPSHDMVIL
DLGLPDIDGLLVLKEIRAKKNDLPVIILTARDSIDSKVKGLDYGADDYLA
KPFDMQELLARLRVIERRLGTASSSMITIDRVSLDTKSHKVYLLQCNQVN
NEQNHEQEGEINAQNGASEVHFSKKEFMVLKALMENAGRIQSREQIESKL
YQWGEEVLSNAVEVHIHKLRKNLPNKFIQNVRGVGYIINHPQD
>CPS_4926 DNA-binding response regulator, merR family
MDISKKSLLTPAEAAKLLHVAPTTIRHWAQIGRLPFISTPGGHRRFDRND
ILSLMSTPKINVKNDFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNP
FDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGA
LTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQKKATS
>CPS_4528 methyl-accepting chemotaxis protein
MNLTVAVKIIGGFAIISTLLIVISTISLSNLSTISESTQQQNTLAIPTLK
ASNKLAIEISQMSNLTLKGYYQEDHALLAGNLNNYKKIETVFAQQLSELK
QIVASEQDLLTNLTQVDQLYSNFNNASIELFNNRKISIEQKQLLTEKIDI
LEEKADNTIMLLLDLADHELADTKLQRAINLSDYFENQLNSIVSSALEYR
DILNESTAEFIGSELTRSISDARQSVDNITFELNSHEIKDISEQVTLAFN
EIESLLSQENGIIAHKNKQLKSNRQASLMLSQEEKVAKQVNRILDKQLEL
ANQTTITSSQLIEDSVSNGTTHTTIIMLISIAVALIIARITLIGITRPLA
RVNEMLSIVASGDLSLKLDESGKDEFAQLSKNCNLLIDSLRNLIESIVNR
SAQLAAAAEQTSAVTAQSTTAIEEQRNQVEQAASATTEMSSTSQSVLSSA
NDALSEIKHADEEAERVKGISARNRQTIEMLANEVESASQVINQLQQDSA
SIGGILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR
TQESTSEIQTMIEALQTGAGKAVTVMDAGKSKASDCVNQSEEADQALETI
THAVHEAFDRSSQIATAAEEQSVVAHEISENLESIVTIAEQTTAGSQQTA
ASSSEVARLAEELQQSVQKFKL
>CPS_3066 sensor histidine kinase
MNNLFTPFFTRLYGSLFLAIFTSVFLTFAVLDEWNAHDATEDFATDTVFF
KDILEVQRKTENSEASVFYSNLDSSHYPFDIEWLGTQALSLVCNSCIYLN
NHKNVDVYEIQNGELLSIHSVANTSDKFIIKDKQQEPELLGYEMTNEPFD
IEEYSIFILLFVIVVVIGLVLYLPIRKLQKEINHLNQISFQLGSGNLKVR
ASNSLAEPLTILAKSFNKMADALSNKVNESQVFAQAVPHELRTPLSRIQL
ATGILRNKNLTAEQTSLVDNIDQYIDDIDELCSQIIQFSKLNIQTEENDC
EYINLNNFITHRISQLILNPLIPVTVNFTEIITINCKAAHLRLIIDNMIK
NAVAHAKSKVTISVSIAVNKIEIIIADDGKGIAEKDYDIIFIPYARLDNS
RTRKTGGLGMGLAITKGAVNQLAGEINVSNSTSGGALFKISLPRSHENHL
PSRNIKKTRVI
>CPS_0820 GGDEF domain protein
MSFEDEYQVTSEFSDRTNDFLSSHLISPTPVNYSVIYLHISNENEMLSAA
INKKLKQGVLITADFMADLFERYVSLTEQIENTVLAPFEKTLSKTLEQIT
KQVSNEDKAAINLEKLDKILAKTKTTTSMDNIVSYLFNTINSTKAQHEEL
SQKLTTTQQEINQLKDKLASSRQEALVDSLTGLLNRRGCDEKLQNLSHAD
THSSLAIDIDHFKKVNDTFGHFIGDKVIQRIAKTIQSHIGEQDLAVRFGG
EEFVVVMTNTPLAEAKNIAEKIRIGISKMRLKQRDTNTFLPPISVSIGIA
QNDNISEWTTLFEQADTALYQAKNSGRNCCICA
>CPS_4071 GGDEF/EAL domain protein
MAIHKVSKAVARSSVSQTEDVGFFQRFAMVFESLFIVLITAALMWSTRFF
DITEFVMNLSSSQPHWQLGNIITLVSISALGSLVLLIRYSLHLRKKMKLQ
FVAEEEIKRLAFFDSLTNLPNKELCQDRIEQALARAARNNTSIAVLFIGI
DDFKAVNDQQGHVGGDKLLKQIAKRLSGQLRSGDTLARITGVEFIIILET
ISPKDNINMFADKILLKLTKCYRIAMQEVYITGNIGVALYPSDGEYGKEL
IQHADTAMCFAKEKGRNRLAFFSKELQEQVNIKKKIAEQLRGAMERDELV
LHYQPIIATHSNEIIAVEALLRWNNELLGDLAPDVFIPIAEEIGIITKIG
DWVLAQACLQNKTWQQQGYPCIVMTINMSVMQLAISNYARTVSTSLTETS
LEPQYLELEFTENTLMKDAKQSIVQLRELSALGVSIALDDFGTGYSSIKH
LAKFKLNKLKIDGSFIKHIPESAGDIIATRAIIALAKQLKLHVTAEGVET
ANQCEFMMTNNVDSMQGYHFSRPVAAKAFELLLQSPSWQSN
>CPS_0637 conserved hypothetical protein
MVDHQGSEQENRRRELLSVEVQAQQEKIIAEHGEEHFRKQTKQNFFSRLR
TQINSDFDNKEHLYHYVLGIEDACPAILDILSARAASVNQIKDLAASLSW
LTIDLISLVNKPQYRKRADVQVTDAKLALSYIGLDNLKLVMPTFTLKHWL
PTSTAPYGLMKRKLWNDSLSIALASRVLAKEQGLDEFTAFTTGMLSNIGR
LAVTRCYLTKFSEMHKKEVREAFEKKDKRLHNVLSKIETSEELLLEQLIM
RSSQLSADLIEKMHFKRLAITEPIFDLAYADNIEKMHPIAQLVAKAKAYV
AFRALAKEELIDSDESKKLLSTVNLTPAEITLLKKSDIDHIKLNFN
>CPS_4949 serine/threonine protein kinase
MKTDQNAYTKQAAQAPPLTPAIPLTQAKLQVFLGGHSNAGIKATNEDAFA
SLVPKDAELTAKGVVAVIADGVSSASKAAEAAQLSVTQFINDYYATPQTW
STQKSASKVLSSLNQWLYAQTDAVSGYTLQWLTTFSALIVKSSTAYIFHV
GDTRISQYRQHELEVLTKDHQQKQGPSHSVLTRALGADHRLQVDVQQVAI
QAGDIFVLTCDGVHEYLSAQQIKKQLNQLPQSPSTQALEQMAKLLTELAI
KKGSKDNVSCLLVYIGGTPNRALVEIERELLNKAIPPALAVGNSIDDYEI
CKVIHASIRSHLYLAKHPNESEPCVLKVPSKNLADDSSYLQGFIREAWLG
ERLSNSHVMKIKRGSENSRFLYHICEYIDGQTLGQWMFDNPKPNLAQVRD
IVGQIIIALRSFQRLEVIHRDLKPDNIMIDSYGKVFLIDYGTALIASLAE
NNDVVTETVPQGTLNYIAPETLLTLHADHQSDLFSLGVITYEMLCGELPY
KPMQRADMHSYTVDDEKSRVENYSQWQYRSIRQFRSDLPFWLDMVLSKAT
QADPKFRLQAYSEFKADLSKPTASALEEYKSQPILQRNPVLFWQGATALF
FILWLSTIFF
>CPS_4941 sensory box/GGDEF domain protein
MLRARGWYVLTADLLYWLVIGMPLTALLIWSNMEFAQSFVFFSVLKQAIN
AMLYTSLACILLFTFNDYFQSIKSSQPPLVKSLPKWLLYSFWSISAFFVI
CVSLVLSTNFSEFQKAQLEKELEINNNYITHIGNSYLNEHQQAIENIAYQ
LSYITDPAERKRALSKFHHLYPGFLTMLTASKQGKIELASPSSIMEKLVI
GQFSVVDRPYFIHAMEEQKLFVSDVFLGRAFGNDPIIAISAPLYQGDGLN
GPSGIVEGSLNLGMFGLYDKIGHDEKLIKTIVTDQNDRIIYSSDSLQLET
LSGFSYEDRAYKNSLNLISLKSEKNEGEMFIHKQTQLMNDWKIHSLIEHK
FSLKNIEDLYLVMFLTLFVTLLAASFFAKRFAIHLSRPLRFVMDELSKGK
KTGDFRDVPYETPTEIQKLYQELRVNRLALLDNQEELQKQVFKRTEELNQ
ANRKLTEQANTDTLTGLYNRRYFEKNFKMMQSIFSRNNSNLMYAIIDLDF
FKNINDTHGHLFGDYCLVTVANMLKKFFNRDSDLVARFGGEEFVVVSQCD
DVEILRSRMDEFLQQIAAYAFKDDGKGPITLTISVGIAVGQAKYSNLGED
WFAVADECLYEAKDNGRNQTKITVIDISAKVNV
>CPS_2033 DNA-binding response regulator, LuxR family
MIKAVIVDDHPLFRQGIRLLLESSGNVEVIGDASNAIEGERLIMGKLPDV
AVLDIGLVGESGLQLAEKLRARGYKNAIVMVTMHTEVSIFKRAAAIAKVE
GYVLKLDAAEDLENAVYRACNGQKFVSPSLAQEMAWMEDDSQKTDSLLTK
REEEVLILIADGLGSDAIALRLDLSKRTIDSHRANIRKKLGLTNSVELTR
YAIEQGLI
>CPS_4818 sensor histidine kinase
MPQFFKRTSKIQAIIALRSIAIAIQLLLILFVNLGLAYELPWTPLVSVIS
LEVLFTFGSYLYYSRNHLSEKKASQKAILVQICADIIFLSLLLFFSGGAT
NAFVSLLLIPIAIAAVTLTPLLLTVVAFLAIASYSILLWSLPMSVMHGNM
QGHFIGMGINFLFSALVVAIVVGKMARSINQQELAIAAYRENLLKQEQVT
SLGVASAQVTHQLATPIATVQLLADELSEDFPDNEIVLDMQSQLTRCRDS
LSEFRAMVFDIKEQVIKAINCQDLFDEITDNVRVNNPEVSLQLQKNSDEH
AKDVTIDADAALLPAILNLINNAIRASKANNSNALSLTCQTIENNWQFTI
RDYGKGFTLKKLNELGVKPVNSDQGFGMAVFLSHASLERLGGKLALTNHQ
EGGALVTLSLPISSLTSGNDYA
>CPS_2473 DNA-binding response regulator
MLSDTKILIVDDDELTRQVLSSYFENEGYDVSCATTAEEAEELLILGTVD
LILLDIRMPGKDGLTLTRELRVNNEVGIILVTGSQDEVDRLIGLECGADE
YVTKPFNPREILARAKNLIRRVRLCQKVKSADNDDYILKAFDCWKLNPVR
RQLIDEEQTTVQLTEGEFQLLKCLMDHVGQIMTRDQILDQIRNREWVPTD
RTVDVLIGRLRRKLGDDSTNPRLILTVHGAGYLFTPKLVDVV
>CPS_3577 GGDEF domain protein
MTLEKSQLNELHWLMEMLHNIDVGLVVLDKEFTIQIFNGFMENHSGLLPR
QVKGKLIFDLFEEIPKDWFTRKAESVFLLKNKAFTIWEQRPYLFKFDSYR
PVTGSADFMYQNTTFIPLLSSTGDVSHLCLLVYDVTDNAVHKQGLKKANE
ELAILSQTDGLTQLFNRAHWETCLLAEHKRWGRSQHASSLVMLDIDHFKN
VNDTYGHVVGDVVIRHLSSLIRHHVRETDICGRYGGEEFAILLADTSLKN
AYVFAERLRKEVAKATVTYNDIDINYTISVGVAEVDESITSHEAWVECAD
AALYQSKETGRNKTSLHPKQNR
>CPS_2511 HPP family protein
MNNYLLSVIAGFGAFLAIGLLSYMEAILGDVALLMAPFGATAVLVFGVPD
SPLAQPKNVILGHFITAFIGVVFVQYVGVTPLTLALATGLGVTAMLASKT
THPPAGANPILIMLSAQGWGFLITPVLIGAVIIVLVGKALRMLQNKYSRL
EN
>CPS_4752 phage shock domain protein
MKYDREYSSIKNVRQTLCKDVANKKLTGVCAGIAKYYDFPRLAVRIVAIA
VLIMLPVATGVAYVVASMLLPNSKYY
>CPS_1378 putative transcriptional activator
MINHHPKFELIQAFVNGDLPASLSAGIAIHADMCPVCQQTIAQFTEQVAE
NSFEEEYLDRFIIDDNEALEAIATIDFDHMIDNIVESSDIAVVVPKVEKT
VSFNDTTYTLPAALNSMEMGKHAQIGKLTRARIQLNENEIHSSLLHIQPG
GGVPEHTHKGFELTVLLAGSFHDESGEYVKGDFIMLDSSHQHHPISSNGC
LCYTVANDALHFTHGINKLLNPIGSFIY
>CPS_3588 conserved hypothetical protein
MIKILCRLLLFSLLCSSSLIMAEQDLKIGIGNFAPFLDEEDNQGVFLELT
EEIFKQLPRYNVQFIYMSNNRLLHEINSGQRIDVACNIFSNSSVKGFLSS
PVFRYTDVAVSKNSAKIKVNQISDLQDFSIAAYQGAKEMLGDDYKKMALA
NPHYSEHSKPDETTYMMVAGEKDIRIGDIHIFLNDLADKRYINEDKIAAK
DFTIHRLWPDVYSHMAFKDEMLRDSVNKVIKELTANGTIEAIYRKHR
>CPS_2278 LytTr DNA-binding response regulator
MSLSTIIVDDEPLARKGLAIRLRAHDDINVIEQCCNGREALEAIRAYQVD
LMFLDIQMPGLNGFQVIESIIEQGLAMPVVVFVTAFDQYALKAFEVHALD
YLLKPADEERLEQTIDKIQHYFKSSADTAHKSKLVRLVSDVTGNDYQKIL
TELDNDQELTLSSYSDVLAIKDAGEVNRVSVKDILWIDAAGDYMCVHTLE
TKQNTRQENTYILRKTMKELEACLDPKQFIRNHRSTIVNKNIIDKFCSQV
NGEYFLVLKNGKELKVSRSYKDKVKQAVNS
>CPS_3573 phoH family protein
MTTSATKLTRAVFSLTPVDNHRQANLCGPMDDNLKTIERRLGVEISYRGH
EFTVVGQPSNSQAVVQVLKDLYIESQEVKGEGKIITPEMVHLAILEADCL
EQEQPSDKVSSELGKQINSQLDNKFDDMLTIKTKRGVVKPRNGNQQAYVQ
SIITSDISFGVGVAGTGKTYLAVACAVDALERQEVRRILLTRPAVEAGEK
LGFLPGDLSQKIDPYLRPLYDALFEMLGFEKVEKLIERNVIEIAPLAYMR
GRTLNDAFIILDESQNTTVEQMKMFLTRIGFNSRAVITGDITQVDLPRHQ
MSGLRHAIEVLQDINGISFNFFQSKDVVRHPVVARVVDAYDSYEQKINRQ
KQEKKQAQQTSNDKSDVS
>CPS_0952 GGDEF/EAL domain protein
MNIKFVGVPTKLLVLIVSTLLLLAVGFSSLSYWRLQADYQEFQQNNIVQG
QVQVNLHNSILRTKITVWLESFTDLIQLSQQDDFSNLALQLEKQYDALQL
HLNVEDIWLVDEKQNILFATNDFPAVVQDNIAQVFRLQEPEHRIYCPQSC
QLLLSLPLLNKQGDMVVVTMSTSLVDMLFALKTTLDRDVAVIRIPANGEI
NSSSAKVISASNMRLTESLLAMNKPDSALNQVLAQGLHLDLEKNSYLINL
LTLSEQDKQGFYLALIDDVTAYKAKNDAYQKRFILSLSLIFSLLAAFVYF
ISSPFTKRLLLLSNALPLLAQKKFDQFRQVDLKRPRMFADELDVLAHSSE
ELSFELEQLNLVVEQKTKELENIAMYDLLTGLPNRNMLNYQLRKSLANIA
RHKSGVAVLFLDLDDFKKVNDSNGHNIGDKLLIQAAERVRVSVGELDLAS
RFGGDEFVIVLSHLNSVDDAIEVAEKVLLQFKESIKLGSNIFYVSTSIGI
AYTESATEKSDDLISHADIAMYEAKDNGGGQYHIYHQEMFQRVAHRVMLE
GEVRQALAKQQFSLSLQPQICAKTKKLYGFEALLRWQHPERGMISPEDFI
PILENSQHMIELGYWIIRRCFELVISIKEYGLENIRIAINLSAGQFMDAN
LPHFLNDLLVEFSLTAKNFELELTEQTLVKDMDHTIAMMESLKVIGFSFA
IDDFGTGYSSLAYLKKMPVDVIKIDKSFIFGMLENHSDFQIITSTIAMVK
NLGLTVVAEGVETQAQLRSLTENDCDIIQGYYYSKPIPEKDLFTMLDKQT
TKGYWKVAKKIEPDLSTGKSA
>CPS_4372 methyl-accepting chemotaxis protein
MLIKNKLIANTAILVLAMILMLMLLNYESSALQHDINIAKSIGNIKASVL
ELRHEEKDFSAHKKLTNSDQFNKQMKNVQHQINALSDDFAEVGLSMPELT
SMGNILVQYQDQFTHLVGLQKKIGLDAKSGLYGELRGAVHSVETLIGKDN
YRLRSEMLQLRRNEKDFMLRLDEKYVDKLNKNVNKLLTSVQASNFTFAKK
QEVNKLIKAYQNSFSNLVISQKELGYNEKMGSRNKMRHVVNQVDNELKKL
LSHSESAVKEDVNFINTLAYSLFSVVLVVALVSAWLIGKSILNRISNLQS
SMNSIAQSNDLTIAVDVSGGDELSDMATVFNHMLTNFRSLIVEVNHSVNT
LNTATGSLAENIYNANEGVETQMQQTDLVATAVTEMVATVDEIATNTREA
AHKAEVTNSNAGKGKAGVEQTINQIGQLSEKLLDSENVVKELEKESVTIA
SVLGVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQD
STQEIETIIGLLQKRTQEIVTLMAECRNQGKESAEQASSAGAMLDEITQD
VALIMDMNSAIATAIQEQSTVASEVNQHVVMIRDVTEQSGDSAKQNEQMS
EELSQQAQVLTTEVSRFTV
>CPS_2160 conserved domain protein
MKSLLKSIQYDMLDFIEGEDEGDADYTSEDVKLCITGLLEFMSSMASEAQ
TLESSKEHVKTVVLSLNSLNHQCGDCLIETDQREDICEFIKKVMSAANVV
FSGDITEEWREW
>CPS_0577 sensor histidine kinase
MLIVQLILINIAFIVSFSLLLPSSPWLFSISSILLITLAAMRYQHYHRQT
HQILQTLLHGLRNLQDGDFSITLADKKTNKSQSQSEVLALFNQVTDKLRQ
EKQSLYQRELLLDKVVNASDVVTVLVNHRDTIIFANRAAEYFFNQKSMLG
MSWTTLLDEKLPELIPHNDKDNAIIQLLLAETKTEHSWHLSRHHLKLHGS
RHQLTLLKPITKAMHQQELQTWKKVIRVINHELNNSIAPISSMCHSGNIL
AERLNEPQLIRVFATISKRINKLAEFIQSYSQLARLSQPKKQEFDLIKTL
KQLQELYLFTLSCQGNSLMFTGDESQIEQLLINLLKNAQQACPDKVNAEK
SCVVSVSSQQDKLVITVRDFGTGMPVEVLQKAFLPYYSTKADGSGIGLSI
CREISDGHQGQITLNNHPKGGLQVDVYLPHNVN
>CPS_3990 putative GGDEF domain protein
MNTSFIKYHSHLLTILFFTLGAVITCTFNLGDLKPSSEFDYLDALGEGGM
TLMTLVWIGFILISRPAGKVTNWLFSGLILMNISMLLDFIDEFVIYPQNS
AWLTAIESLPAPVGMVIMSIALYHWYQEQMTINAQLRRTERFYRDHSLTD
FITGLYSAKYMKKQIKHQLLYSKKTKQPFTMMMIDIRQFDQFNRQYGHQQ
GDILLREIGQVITMNIRDQDLACRYASDRFVVLLPNTTTTFAETFAWHIE
NSLANLAFKVGSDQQANYQKITLCSKEFDGSQSDYQVLELMSQQMDSTKK
QNNKHHNKQVA
>CPS_3241 response regulator
MEKPSLLILDDEKEVLNALNRVLRKHFQLYLFSDANEAIGFYQDNPNIPL
VLTDMRMPIMDGATFLGKIIEINSHCKRFLLTGHADINSTVIAVNEGKIS
HYFSKPWDNEELVTKLKSAYELYLNERKTKHLLKVNLAKNAELSLINSSL
ELETNKNQQKLQLISTREANSFGRLKKTFSTFIDIYAETICLHNQDVSRH
NFRVAAHARLIAEMHSCDKLTTFQIYIAGLLYETGKLSLEQTLLNKPIDT
LTQQEKNLYSAFYQKSYELLNRVDELSFVAEIIKNIPANYNGTTAPEHLT
ADEIPLGSRIIAIVSMYDNLVNGRQSQVKTPTVEAKHRIKELAKTMFDPS
LVNHYLTILEERPSSSEGKVDYLLNCSDLQEGMMLTRDIVNADKNPMLTK
GTTIEQHHIDRLLEIEKSQGEFFLVYAR
>CPS_2813 conserved hypothetical protein
MSNQAEFYHELLGQTKALINDESDIIANMANISALLFERLADVNWVGFYR
LIDGELVLGPFQGKVACIRIPVGKGVCGTCSFTGEVQRISDVHQFDGHIA
CDASSNAELVVPVKIAGKVIAILDIDSTVFDRFNLEDEQGIVSIVQAFEQ
NITAMDNA
>CPS_0452 sensory box/GGDEF domain protein
MLIYNLAIHSYLGCDSLALLPKANTLSKEKNINNADDTIKDQILASIDSF
IYTKDLSGKYTYANQAVLDLFEKNLADVIGFDDTHFFDLALSKQLKANDR
MVMDQVIRIENEESNFIRAKNETRIFKVVKKPLFDHLGNVNGICGISTDI
TVEKQLQEQVNEQSYLLETMLNNIDAHIYVKDCERTFLYVNNRVAELFGD
KAENIIGKKDTDILPKEIAEHFYQSDKQVFETNQKQVIEETTHGENGDNC
HYISTKVPFDRPDKLPALIGFSTDVTELFKLKEEFKLLANTDPLTNLYNR
RFFIEQAEKEYQRAKRYSLSMTLISIDIDHFKSINDQFGHPAGDQVLIEI
AKQLKASLRQTDILARIGGEEFSILLPETSAMSAMTFAERIKEEQSRLII
TGDWQGEINLSVSIGVSSLIASDKAFDVLFSRADKALYQAKNTGRNTVCY
L
>CPS_3578 response regulator
MTTKLLICDDSNMARKQVARSLPDGWDVEISFAADGVEGIEAIKAGKGDV
LLLDLNMPKMDGYQVLEAIMAQDLPTLTIVISGDIQPEAHQRVTSLGALG
FIQKPVNKDILTEVLSSYGLFSHEIPATNHELDTSHNTSINIPATTPSAV
INTPEKPKVTQINVSTVESEPQVAETNLTLSTDVRDCYQEIANVAMGRAG
DLLARLLNVFVELPIPNVNFIEVSELRMALKDIENHESTSGICQGFISAG
ISGEALLILNDSSFKDVASLMNYQYDADMGTELELLMDLANVLIGACLKG
ISEQLDIQFSQGHPEVLGQHRKISDLIANNANKWKKTLAIEISYSIEDYP
IKCDLLLLFTEKSMQTLNNKLAYLID
>CPS_1619 DNA-binding response regulator
MNKLEKLLTPAQVGKLLSVSPITVRFWAKEGRLKFTTTPGGHRRFELSEV
ENLVGSKLVAKKDKTIIIVEDDKQHADLLVEFIEVLYPKFEVKVAYSGFE
AGSMIEKIKPSIIFLDLVMPDIDGFAVCKHIRSNEASKNTPIIAMSGLSQ
QENIEKVIASGANTFLMKPIRLSVLKQAVDSFIVD
>CPS_1691 hypothetical protein
MPGLLKADGTGIFNKLNNAIFMEMSKDAELTLTSLNRTRKGIKDGTFDVY
FPELWENLPGEKHQYVVSRPIFYKRIILFTLEGSGLLELSDFENELLGVV
QGFSYGREIKSNPRLHFTSQEDDIVNIKLLLNKRIGGVLGGYPGTVIAVK
KNDAANKIHYNLDKPVAVLESFYVCKNDADGIKLCNGINKAVESLLRKGI
LELNDDTGFSRFNPQEHN
>CPS_3571 hypothetical protein
MLIKYLTLGQKKTIKMILENPLTYWYKSQPFMMACRKFLSPVEKKSTIKL
NHKVSFNIQLNKMFKAKLSILLVFSLLCVSFLSEANNATSIKTLSNVNKI
LQDKDGFIWLAGQQGLTRVDANSNITFSLSNQEWPLPYSWIHNMSLIDDN
LLLATETHGLWLFHTQTGTVTKIPVDIPRQNHFDAVMFKDKYYINAPNKL
YRYNPSTKETNIIENDISIDHLVHNQRHLYISNEKGLFQLQGDRLSIIIN
EPITALTAISNAVIAITANKIYRFSDDGTISNIGHNETIYGLTKAFDSDD
FFTVNKKNIITKYNGLTLSTIPHHYGQSKTVRIRDIFHDASGVLWLVSNQ
GIEQVNENYITNHEVIFDIPINANEIKLFDNEIIIGSYGAGLQNFLKPIF
KPSVNTAFTKKGLKIFDAIEVNKNLYIASFDGLWRYDKNQEKVSKLNIIA
DQLVLKLKHKNNLLYIATNDDGLYIYDLNSKKIINHIDVKKGLLSPEIID
VLPLEEGKIWIANSRHISIYEQATNVTTTLKSPNKSKVVSFVLADNKIFA
STLGDGILVFNQQGDLLAQLSKDHSFTEMIKINGDVWVSGQPGLYRISPK
NYQVTMIENTQQYSFVSSMLVKNDTLYAIHYSGILALDLSEQKQFNPNVI
ISKTTISGKAYLLNKTIKIESGNDVITFDLASLDYRPGLAKKYQYRINNS
QWQQISNNQLTLTGLASGHYNIEIMATNSLGHWSDVKAYTEIDVAYPWYW
TVELKIIYIILILFIVLLTSWLLYLRTKSIRNIHNLLKDDMRNCGRVMKT
IQRNLQLTSTSLASNEVEQSKQLIEKSILVLKENLDSQEPDSLAGKDLTV
AIPFLANYIHSKYEVKLYCTLDDKIDSLNYELRSDVYKVIFEALMSAIFK
SEAQNFNLTLQEVKQKLWLTVNSDNDSFNQLNSRIDFDLASYTIRQITSK
HHASLNTFDNDDGSSQLVISFPLMTLN
>CPS_0681 DNA-binding response regulator
MYNILLVEDDISLADWVSEYLTEQGFNVTHVARGDLVIDVIKKNTTDIVL
LDVMLPGLNGIEVCRLIRQHEQSKQVPIIMLTARADEFDEVIGLEAGADD
YVIKPVRPRALLARINRQLSHNDKVEPDLNAPLIFGELTINQEAKRVLYQ
GKEVELSTSLFAFLTYLAQHAGNVVDRDSVFKALKKREYDGQDRRFDVML
STLRKLFNDDPQKPQKFKTIWGKGYLFVSDAWQDNSQDKPACDIEE
>CPS_1260 putative nitrate/nitrite DNA-binding response regulator
MIKVLLVDDHPLFREGLKHRLSLDDCIEVVGEAENGKQALELIKSLDFDI
VLMDINMPEMDGMYVLELIKEQDLDCKVLMLSMHDNKEYILGAMRHGADG
YILKDVPGAELIEAIKKVISGKHYFSSEVTEILSKELAGEQRGIVTRREQ
LVLRLISQGLNNKRIAQELNVSVRTVETHKRNIKQKLGIDSTVGLMRYAI
DYGLDR
>CPS_1406 DNA-binding response regulator
MSNLKELPVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKA
IELKPDVILMDISMPTMNGIDATEIITEQLPETKVLILSMHSNPEFVKSA
IQAGAVGYLLKDTTSEEIYYAIKAVANGKTHFSSSIAKLLIDNPVNTNES
EKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEAHRRNMKTKLGIHSL
AKLISYAVKHGIIKN
>CPS_4516 sensory box sensor histidine kinase/response regulator
MYFQAGINTVFRRYNITVVVAFIVIILIAFSAASVRYFNQISQHKKQSLL
ELQQEAQQLNFMLEQSVQAVVGIQELAEYILKHPNEINIPMPSLLQQENL
FYLNKPQHDVIKQGKRLSSNITGIGQISKFGELKKQEIAMANALTPAFIA
SQNILKEATWFYYISLDNFVNIYPWVDREIWQFSEKALDSQHNKAMRVLT
AKNNHVIWSPPYLDAAGGGMNASLGTGVFHQDKLLGSVVIDINLSRLHAS
LPELESNNQGFVLYNENNDVLLSKRLGKESLSYRASWQDLLPESLQYLSA
KHLATMGDTERLGDWFIEKQQLTANGWTLLKYQQYEDFSAPQYSDFIFVF
AMLFIGLFAFLMLVNTMTKRTFIKPTTEFISHIEYCAQGDPGKVTPAADW
LHWFQVVEDIFAQNRSLLLQLTEQNDVLDSRVIEKTKALQETSTKHQRDY
ALLRSVMNAIPELIVFNDPDGSLMGCNKAFERLANHSVEQMLGSNSASFM
PVPLAEEIKILNALNNNVYPQQALIKAGEFIYQGFCNQFTDEQGNILGTI
SIFHDVTSQQATQSALVKARDQAEYANRVKIQFLANMSHEVRTPINAMQG
MMDLLAHTSLDTRQLHYLVNAQSASSTLLHLVDELLDLSKIEAGKMIVSQ
DAVNLPIIINKALKLNITNVDHQRVKIIVDMSADVPSNVISDEMRLVQVL
ANLFNNAIKFTEQGQIKLTIDVLSIDDTVAKLRFRMSDTGIGIASNNQSH
LFNAFSQADESMTRKYGGSGLGLSICQQIIKLLGGKIKLTSQLGQGSELS
FVLPFQIVQLDTLAQQDSARANNTAQKVTEEFMTTLPAELSQPLLSDITI
YAVDQTLSASFTQSIAKMNWLLHGVNSVEALCQLDIADNSILLIGEADFV
KQQREQELIAPLNEFRLLCLCQPALTQLNNNTCNYLDQLSVPYLLVDMPL
FRYALDQISQALFYKVEHSAQQDKNLSVIAEYSQGSQGIISKKTETTNRQ
ECAITHDKHNLKEVSVLLVEDNLVNQLVAKELLLNMQAKVTIADNGQEAL
DLLAEQDFDVVLMDIQMPIMDGLTAAKHIRAQSNYQYLPIIAMTAHAREE
DKQLSLAAGMNLHMPKPVTGQALLSSIKKVLTNLSAV
>CPS_3443 transcriptional regulator, LuxR family
MSLKLYLPAIVLAFAMVFFIFDIISDVLSNEDGFLHLSLELMVFMAISLV
LFHELQHVKSLNKVIIIEKSKTARLAGELLQVMKEQFAKWQLTPSECEVS
LLLIKGLSMKEIAEARQVKEKTVRGQATAIYAKANCAGRHELAAYFIEDL
MREV
>CPS_0149 leucine-rich repeat protein
MYTSAVFNHIYGRFMLHTLSQLRSGELAGISQLKLSENLNTFPLEILTLA
DSLEILDLSNNALSSLPDELAQLTKLKIIFASQNQFEHLPEVLGQLPNLE
MVGFKSNQIKQVAEHSLPAQLRWLILTDNLIETLPNSLGERPRLQKLALA
GNQLTHLPQTLAQAHNLELVRISANKLTECPEQLLNLPNLAWFAFAGNPF
TAVEPTTHSESYTKVKSVPELSSTSYTLENVLGQGASGVISKAHWNSPQS
QFPEDIAVKVFKGEITSDGYPQDELQACLQVGYHPNLVESLAQVNEDNYL
ALIMTLIPENYQNLGLPPCFNSCTRDTFSQGFRLPITLISNIVSQMQDVF
AHLHKNQVCHGDLYAHNTLFDSQGNIIFGDFGAATSYQMLTPAQQEKVKN
IESKALNHFIDDLLSICAEQDKTTKAFDTLKAHISA
>CPS_2232 conserved hypothetical protein
MKINLYFIILLASFSSIADNKITYFIADKSSSPIQISTKNSEQVGIVTDV
INAIEKQNIHFSHSILPFKRMMKYMKNPKVKWITYGSAAWPGLQSLSLSK
TPIMTVKHSFLTLKPNKYNEISDLFGKSLVLIRGFNYPGLAAYIEQDKFD
IIYVKDHEAAIKVIAMGRAVAFPEMNIRLNYHLKNMKLPRDNFKFHYIGN
IIADYDINLCFSLNFPELLKVKIEGILVEMKNDGRLENIINAY
>CPS_0651 DNA-binding response regulator
MKDNILIIEDEIDIAKLIKVHLSELDLNCDICTQGNEALQQALTKDYQLI
LLDVMLPGISGLDICRQVRQEKPLQSIIMLTSKTSEIDRILGLELGADDY
MTKPFSVRELQARVRSQLRRVHAITAKNASEINSLVHEEKPVQESAQLDK
TSTSIGQLLVDHRFHQVTYKNKAINLTVTEFELIDFFCQHPDQVFSRAQL
LDGVWGYHHNGYEHTVNSHINRLRSKLEEDCTEPKIIQTVWGVGYKLNSA
GVMPSTVCKD
>CPS_4272 sigma-54 dependent response regulator
MSLSNQTVTSNSAKILIVDDDPSLLRLLGIRLSAAGYDVESAANAKIALG
RLQNFIPQVVISDLRMEGMDGMALFEQIRIQHPNIPVVIMTAHGTIPDAI
NATKQGVFSFLTKPFESQELLDTVEQAIRLQPSQNEKTGETELWRNNIIS
RSTVMTSLLQQAKQVANSDFSVLIHSQSGTGKELLAKAIHQASNRKNKVF
TAINCAAIPEQLLESELFGHIKGAFTGAERNHQGLFQATNGGTLFLDEIG
DMPLSFQVKLLRVLQEREVRPVGSTQAVKVDVRIISATHVNLTNAIKANT
FREDLYYRLNVVELELPTLAQRREDIPLLVQYFLNQAVARSNVPIKSINQ
EAMELLISAPWPGNIRQLQNVIEQSIALSSESIISANLVKNALRDDSTQF
PSFQQARDHFERDYLSKLLKITAGNVSQAARIAQRNRTEFYKLLNRHHLV
AESYREE
>CPS_3924 sensory box sensor/GGDEF/EAL domain protein
MKQLFNPAINLMNNLSYPRKLIVLGGLSLLSLLIVSISLLVYLSESISTA
NQQLDGLKQTQKTSRLIQSLQQHRGMSAAVIAGVNDSTEKQMSVNKQVVN
NFLKVSNNLPSELKQVAKWSTIVEQWQYLDANGMTLALNESFNLHTELIH
NVNSLQLQVADYYYLLVMDDLDSYYLTNSFLFTIPITLELLGQARAVGVS
YLGNKEVKFRGEMLSLLSKTIVPLDVFKENVDKVKRELISDGESLSAQEL
IQSIESHIKFTLEGILADTTSLSSLELYNQSTSVIDVGYQFLDNSLSFTL
STLLRSRVKQANTQLIVSIGFSSALFLIVLYFIIGLHLSTIRSINSLTKV
TGKFYGGDLDARVTLDTHDELNNIALGFNEMATSFQNLMIDKEEISSRLR
AIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKEEDMLNTPSSNLAELLG
DEIAHHCLDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKLKNAQGE
VVGLIGISKDITNKRQQEEDLKLADIVYQNSSEAMMITDSKNEIIAINPA
LSEITGYSSSELIGKNPNVFSSGKQNPEFYQLMWEEIKLTGTWQGEIWNT
KKNGKEYPEWLSISTIYDDYGNVFRRIALFSDITEKKKKDALILRQAKYD
SLTNLPNRIMFIDRLEQEIKVSHRKNQKFALIFIDLDNFKKINDTRGHVY
GDALLIEAGKRITHCIREVDTVARLGGDEFTILLSDIADIHNVESICQKV
LQTLSEPFFISKMYTYISASLGVTIYPNDASSTLELLKNADQAMYLAKNL
GRNRFCYFTASMQEEALDHLELINDLRKAISLNQLEVFYQPIVELQTGVI
RKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTC
KDQLGLDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENIVIEITEGL
LMNNNTSTMERLSKFRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQS
FTRNIAPGSEDMILSEAIITMAQKLGLKVIAEGIETKEQMELLIGAGCDY
GQGYYFSRPIPAEDFLQLLASDSGDLGMKLKVASGG
>CPS_4295 putative chemotaxis response regulator CheY
MLICDDSNMARKQVLRSLPEEWKDSVQIACNGAEALTILRDNSIEILFLD
LTMPGIDGIGVLQGIKKLNLNCSVFVISADIQPEMQNKVKALGAKEFMRK
PVKADLLLNNLRQHGLL
>CPS_3871 putative sensor histidine kinase
MMQLHLPRIIISAILYLAVCFGAIWLINPQSLVNFVGPSAALISGLLLIW
GITPLIAVLLVSPLLAVGLGYYFHLDANLSVMTIAVLAIILQGCWTKQLV
YRFIHYKEWLTSRKQLFFFILRIGPIASLVSASSVLVIAMLDNQVMTGTF
FYTFVNTWSTSMLAAVFFIPLLLLIKNAERFKLTKRLFVSFTSILGGLAI
LLLLKTSQHEQQDYRQALFNQSKTEVERLVLAEVDDVVNNINSLAALFKA
REKVSLTEFNLFSEGILEQGSSVRALEWAPIVPFADRAGFEQESRKALKK
DFAIIELLANGNTIPAQSRTQYAPLYYIYPQYNNQEALGLDVYSNPTHIL
SMQVVVNSKAVIASAPITLVQDELAKPGMLFSKAVFLPPEVNELASNEAQ
QKLSIIKEGKLLGFVVAVAQFDSFFEQLAQQKEQEVSFFIQDVSGSQPLS
LFGQAFPTVNRHVDTITIEVFSRLWQIDIAEKQPWFSQAKSWQAWAVLIG
GTFGAVLFQMLVLMMAAYSSELGQQVDIKTRALILAKESSEQKSLAKSNF
LQSLNKELRVPLLAVKAFVEQLKKKGINNKQVTGISHAGSNVALLLDTMM
DLSNIESGKITAKEDCFDFYGFLQRTESLLKASNAYEGKSIFFLIDESVP
HYLNSDELYIQKLLNALIESAHHLLKVDSLRLSVKLHKHKLADTSLFFTL
SPLNPASTNSTNLTNSNEQTFHAQSHDDLTADSTALAMAIKYSQLLGGDT
SLGALSSGAGVLNASIRVTISSSEQQEIQQGLIFDLMS
>CPS_4407 conserved hypothetical protein
MNAHDYALQANGSFALPDACFKVKALMADESSEISNFADVIGIDPSMTSR
LLQIANSAIYSFPGEISTISRAITIIGTQAIYNMMLVDVAATAFKHFENQ
AIDLKRFWRMSVYCGLVSKNLAISAGIRDIERLFVAGLLQNFGELLVAKI
NPEVAQQCEKYDKNQLPWQLQEQMLGYTYTEISADLLKIWQIPEKIILPI
RHFNAASSIEINKDVKILNLASRLALIDSHSDEFSYADVIDESLCRPLGL
SVDDLIQAADFAEKEATSILSIMNPKLFSK
>CPS_3296 universal stress protein family
MKNITNILVVMDAASDHQSALVQAINIAEKTSASIELFLVVYNSQFVSHW
NFNQTQLDALQKEYIASKLRWLETYALEVKSLDIVVNIDVVWHSDVSCAV
LAKIASNGASIVIKSTKQDSTINRMFFTPGDWQLLEHCPVPLLLTKHIRD
YSYRTVMAAVDPERAHDKPEQLDTKILQAELLMAELFDSTAHVCHCYQPM
GIELWQGMNAVGMDHSLASGDFTDYSEAIKYHHKVVFDELLSHYTFDEEV
THLVAGSPEFELPELVKSHEVDLLVMGMGNNGKFIGNTIEKILDNVDCDI
LSIRYPS
>CPS_3718 response regulator
MHKLRTIIVDDEPLALNLLRAKLNKVPEIEIIAECKNGREAIEKTMDLAP
DLIFLDIQMPGVDGFGVIKKLQSDIVPLVIFTTAFEQYALDAFDVHAVDY
ILKPIDEERITRAVSRAIVRFETEEETEHKSRIIGAIDTINERENSASSS
QSSQGQSSLGQNKGNLEHKIIIKDRDDITLLKQADIEWVDAAGDYCCVHA
QGVTHIKRSTLKNLLDDLDPSIFKRVHRSTIVNLNYIQKVIPHTKGEYFL
KLGEYDQVKVSRNYRDVIKDFLSDW
>CPS_1139 GGDEF/GAF/EAL domain protein
MNLKSKVPSLISISPEASIALGNFTLAITEAVSEKEIYNKLAENLPKILQ
ADRGSVTLITENKDEFEVFSLQGPEGMLSIGKYFSVDNSLAGLAVQQEKT
IISKLNADRIEIDAQQLYQQDLLSIMNSPLQFSDRIIGTVNIGSYKENAY
DSTSLELLTLVSTLVSNYLERQHLLEQAQIGVKQYKTYSKQLESLNHVAE
ELCAATNESEVFSIITRSASHIISAQRISYCVPNYKDKCFEIRSVFSENE
VMKSATVDMENSALQFVLQSGSPQFFENLAVTNFTDHLILSKNGLCSGWS
VPVRVKGEIVGLLNAASNVKINERAQQLGVIKMLSGIMGVTLSRVNLQEQ
LEHQACYDTLTGLPNRHQFNQRMELAITQDNPIPFTLLFIDLDRFKVVND
TMGHDVGDELLCRVTQRINQQIRKEDFAARHGGDEFVVLLLNKQSKAIAD
ITSARIIKALKEPFQIDEHSIFIGASIGISYFPEHSKNSEELLKYADIAM
YHAKKQGKSSFKLYSSRLSDKIHCRQKLETLLRLAVKNEELHLVFQPQIN
EDGVFAIEALLRWEDPELGVISADEFIPIAEESLLIEEITHWVINQSLQM
IARLRLICPSVYVAVNISAKNCLYPEKLKHCILTGLNDANLPGSALELEV
TENVFLQNVHNTNKLFKDLGHYGIRFAIDDFGTGYSSLTYLLNLPLNTLK
IDRSFIQDIHCNKIKLGVVKGILVIAKSLSMNCLAEGVEIEAQKQCLEEL
GCNRFQGYYFSKPLREKDFLLYLKSDLLQKS
>CPS_4954 CBS domain protein
MDTELSEISTFIHSIPPFDSLPKQVLAQLVRELTINYVRKGDDFPPKGIN
EPRLYILRKGAISCLSADGELVSRLGEGDLCDAFYHSDADVLSNNQTTVE
SQLNVHTDEDCLIYSVEASILHEIGEHFPCVSDYFSQNSAQRLKTKMSQV
NEEAILSSTLMNTSVSNFYQSPVASISAEQTIQQAAVQMTEQGYSCLVVL
ENDNPVGIVTDKDIRRRCVAEGLSTSEVISAIMTRDMCTIDAKCNAYDAL
MMMTAKHIHHLPVTKYDNLVGMVTVTDLINNEGHNAINLSGIINKANTVA
ELKEISHLLPKLQIRLAKLGSSADHVGKSVSAITMAFTKRLIEMAEYKYG
QAPVPYAWLAAGSQARQEQLAHSDQDNAIIICDSMNRYDDAWFESLATFV
CDGLAECGFIYCPGDIMATNPKWRQPQKVWHKYFSDWVETPSPKALLNSS
VFFDLETIYGDASLLNKVRKQLLIKTQKSTLFIAHLSKNALNLRPPLGFF
RDFVLKQNGKHRATLDLKHNGIAPVVDLARIYALAEGISAVNTIERIQQA
AGTPSITKASAENLIDAYEFLGMLRVEHQAKELARGESADNFLSPKEISK
LEREHLKDAFKVIKSLQDARQSSY
>CPS_3258 sensory box/GGDEF/GAF/EAL domain protein
MYLMNTNSRKILFISISVTLFTMAIVYYSFLIGRDIAERYTPLVDATMEI
KLEATTAHLWFEEMMSGDQTVDIETIWANLDQSEWYAQAMLDGGTNEEGT
FLALNDPDLRSQIEETIDGIHHFRQIAKKRWASQSTSGVGSGIEQQFDLA
FLKFNLSTDNVESALQKVRAEDLQTFKFTQVLLITLLLILGIIIGGLSLR
FNNKRIKNIDVLKLSNENVNSSQKQLLNVINGAKLGYWDWCYQTGEHVVN
DEWLSILGLSRQDITNHISDWDGLIHPNDDQFMKKTVQTHILSGKNYVVE
FRMKHADGRWVWIQGSGSVIEYDENTHEPVRLCGTHQDITVRKLAELREK
SRSHVLELLTSGDLLPVILEAIVRGVEQENSDMLCSILLLDDEGKHLLSG
AAPSLPDFYNSAINGIEIGVGVGSCGTAAFTNKRVIVEDIQNHPYWTPYK
ELASKAGLGACWSEPIRSTQGKILGTFAIYHLEVNKPTEANMTLIEQAAS
LASIAIEKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDRNERWA
TMLGYTHKELKHSTNQWADFVHQEDREKAWQSINDVLEGRSKSHSLEYRM
LTKEGGYRWVHDQANVMQRHSNGKPLRMSGTHSDITNRKLAEEKIKLAAS
VFSHAGEGIIITDDKATIIDINDAFTNITGFSREEAIGKNPRILQSGRQT
PEFYADMWQALQNEGYWSGEVWNRRKNGEVYAVMQTISAVRDVHGIATHY
VSLGNDITLMKEHQNQLEHIAHFDILTNLPNRVLLADRLSQAMLQCSRHK
QSLAVVFLDLDGFKHVNDTHGHDIGDELLIALSVRMKEALRENDSLARIG
GDEFVAVLADLTTVEDCEPVLERLLLAASEPVIFDNIVLNISASIGVTLY
PQDNVGADLLMRHADQAMYVAKESGKNRYHLFDTAQDDAVKVQRESLEAI
RSALDNHQFVLHYQPKVNMRKGIVTGVEALIRWQHPKRGLLNPIEFLPVI
ENNPMSIEMGEWVIDTALTQISQWQKLGLNFPVSISVNIAALQLQQPDFT
DRLMILLAAHPDVEPHYLELEVLETSALEDVYNVSTIMNACMALGVNFAL
DDFGTGYSSLTYLRRLPANLIKIDQSFVRDMLHDSDDLAIVEGVIALAKS
FKRDVIAEGVETIEHGTALLQLGCELAQGYGIARPMPASEIPTWISDWKP
DVNWQN
>CPS_3976 conserved hypothetical protein
MMLSKLTKASLLISLTTSSLIFATAASATDPSSSTSLNKVVNAGQQINHS
AAKSQQKVNTLTNQAQTKLQQFHVVTKEVDGLSVYNQQMQAQLDSQMTEL
AQLARSMEEVSIIERQISPLMARMISTLDTFVTLDVPFLPSERTKRVEDL
KTMMNRADIAVSEKFRRVLEAYQIEVDYGRTIEAYSGILPIDGKKMDVDF
LRIGRVSLVYQTRDGSRLGEWKQSSKGGEGQWQALSQDYRLGINKALRIA
RKQLAPDLIMVPVSINETSTQAE
>CPS_2200 GGDEF/EAL domain protein
MYKFSKLFIKNILFALVFIVALGGIAFFLLSTYVNQQTLSQQKTIQTISQ
QFVADDIPAQEIATTLSAVLKASDDYQTLIIKRDSLILVNYQNNYIHPLD
SFLAQRKTVSVSELNLQVQYQLDFIGIINFLTQLFIGVIALSIIFVFISA
RLNYKLQLTIFSVISKQIGNELAKINNADFITKEQDNQQLLEIPALEEGI
AEIKTMMTEQFNNTTNLEIEAHVDSLTGIENRNRFVQFYENEIVNDSPVN
FGVLLITRCSELQTINQIHGYSSGDNYIVRVAEIIKTALISRPTGKIFRL
NSSDFATILPNVKLKLAEDYASELTIKFNDYQQVNELDSVAFTGLVYFDK
SKPLGELLALADTGVSVAQTQKVNSWYSQKDIDILNDSSANYGNQNWRQE
IDSVLGAGRISLLLQPIQPSGRNTRVYGEILARFLNANNNMLPTATFIAM
AEKLDKITDVDRLIIDTAIKEITSKNMLDSSYGINISPRSINNEHFMIWL
ERKLLREPSAASRLVFEISELGLQQNIKTAKRLVDMLHRVGSRVTVERFG
VGLTSFKFFRDLTPDYIKMDSSYTRDIDDDKNNQYFLRLMVDLAHRLGIS
VLAESVESQEEKHTLEKLFIDGCQGYYVGKPAQL
>CPS_2394 GGDEF domain protein
MRFLSRLINTSRLSRVLLIRILLFSGLFTVIITAIQLSLNHQKYTDELQQ
KSQELIELSTPSLTLALWDLMENSALVFSEGMMRSGYYKSILIKNETKKD
IAFLGQIDKNADKQTFNLIAEVEKRPVIIGTIEYQIDTDQVKQKTIDEFI
IILISQFIKTFFVSIFILFIIHKLVIRHLNDISNWLESFKPESSFSPLTL
VADKDSSNEMVKLKSAISEMGQQVHKHTTGLEKIVTERTAELEKLAYTDS
LTGVANRCAFLQVSNEELSRSRRLSYDVCVMMLDLDHFKVINDTYGHDAG
DKVLKQVSEAMNNCLRKEDTLGRIGGEEFAIIAPGVDKGGMHKLASRLQQ
SIALLDFSFLPENKNITVSIGYTKVSNDEDFKEALKRADKYLYSAKNSGR
NTFITDKGFVPSIVS
>CPS_3115 Ser/Thr protein phosphatase family protein
MKFAVLSDIHSNVFALEAVIADAKKHSVDLMVNLGDILYGPIAPKATYEL
LMQYEIVTICGNQDRQIFEATAAELASNPTMKFIIDDLGDEPITWMKSLP
FDAQLNADVYLCHGTPDDDLTYLLENVELGYARLRSDSEIIKLLNGQNST
LICCGHTHTPRTVSLTTGQTIINPGSVGLQAYTDDEPIVHSMENFSSMAS
YSIVEKTEDNWNIKHIRVPYDVKLAVAECEKRNRMDWVHFLTTGRRI
>CPS_1381 conserved hypothetical protein
MENKTLDHTLQGAPLWLTNFVLVYQKLSKENLQLLATIYHENVTFIDPLH
TVEGFDDLYQYFENLYQNLSACDFVIEEVIWQDSQASLFWTMTYQHPKLN
KGKMVTVVGTSHIKGEGDKVIYHRDFLDLGAMLYEQLPILGKLTKWIKTK
AAN
>CPS_1352 conserved hypothetical protein
MKNTYIARQAILNEKLETIGYELLFRDSLDNKFPDIEQDVASSKLIIQNH
IHGDIQKISMGKLAFINFTENSLIHKFPLMFDKDTIVIELVGHEKPTKKL
LKIIKFYYHKGYKIALTEYDLAPHWDVLFPYIDIVKVDIGKINTKRLLPA
VTRMKLFNVAIAAEKVETKHQKQTLVEVGFNYFQGYFYHQPEIIAGQALA
PVKTQMLQLLSETFNYPLNYETVAEIISHDVNLTVGLLKMVNNVATGTRV
EITSLKQAAAYLGEDKLRQFVSILALSKLTSDTTDEVCKQALITGKMMFA
LSDKGVFKSVSDFAFITGLLSAIEVMLSMPMAEIVKTMPLAQPIESALVK
HAGLLGQLLDLTTSYILGHENLTTNGNLNESLQQYSLDQTVVQEEFLKAS
EWCQSLNIDNL
>CPS_3922 GGDEF domain protein
MAAVHPKLIESLVEQTPRAMIAMLIVSSAYFWIFIKFIPFEILVVWFVFQ
MFLAMYRFYNAIMFKKHLAQKAHEKIEKNELYFMLSNVFQAAMWTISSVL
SIVYAPQPYELVSLIMIIGIITAAALSMSSLYKAYLLFFFSMIIPQIIIM
ISFGEHQHIGLVVLIFIYIPATILLSRAIYNSRLSSVEANDSLEKSVNEL
HRLSIMDNLTNIYNRRYFFEMSKKLIATAFREQKPVSLIMLDIDLFKRVN
DNYGHQAGDCILIDLVKELEKVMRKSDVFARIGGEEFTILLNNTSLEGAK
VIAEKMRLTIENKVFIYNTTSIDITISIGVSELNTENTSIEDLYKQADKQ
LYRAKHKGRNRVCT
>CPS_2600 EAL domain protein
MKDKKLLNPECLIDLIENRRFGVEYQPIVSCKSQEIFAYESLARFYSANN
TLIRPDLVYESLHTSPLSLFQVEYQQKKLQLSHAVDDHDIFVNLDQDSYF
SSGVIGQSNPFLKLFKAFKKSNVVVELIENSEINDAIMSLAMIDNLAKSN
IHTAIDDVCNPQSMISTSVIQLVNYIKLDKFVVQNQKNHNFMLLVKSIID
YAHSANKKVILEGVETYEDLQLAQQLKCDFVQGFYYRDHFKNVT
>CPS_1267 methyl-accepting chemotaxis protein
MFKSLRVQIYALAFLPFLFVAMLGLYLQFSSLKSFGDDVTTLTEKTILTI
EKDRLKAIIDSVESLIQPYVNQSGTEGYDDALKMLSHLTFDQGSGYIFAY
KNDGERVLMGNKTAGIGKNYWDLQDKQGQYIIRDLVNKSRQGGSFYTYWF
PKLNETEASPKYSYAIYIDKWDLMIGTGFYIDSMDTVIASIDETISSSQS
SNITKSLVTTLIIALIVGFIVTFAIKLIYSALKNLSSSVEALAKGEGNLT
QTIVDSPIDVLSDIANNFNRFLKALGGDIRNIKQTSVNLAEMAVQSTERQ
RRLEDSSDQQMQETTQVASAVEEMASTSAEIANSAEVTRTSAEKAEIEMQ
NVLTQVHSSNQRMNELNLLLENVEHSVQELGGNVESINSVLGVIQGISEQ
TNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRSQQSTVEISDILDSL
KSSSQRTIQDMSESAEKRAAVSDAMSAIRGLIDSTSESIKELTEMNIHVS
TAASEQSDVASQVAESITGIASLAKDIGEGSSVSREKFEELEYLSQELNQ
VSDKFVV
>CPS_1819 LytTr DNA-binding response regulator
MSELAQVSSSYKVLVVDDEPAARQKLIHFLKEHSDFDVVAEARNGVEALE
CIDKFTPSLVFLDIQMPKLDGISVASNLEFNKEVSIVFVTGFNEYAISAF
ELNAVDYLLKPYDKARLAKTLNRFREFSGTTQKFDIPKLVQDYRTDQHYP
KTLLFKAEGSIEVAKADEVQWIESSGNYVKICLERTAFIARQTLTGVQSQ
LDPTIFVRIHRSHVININEVIQVTPISKGDHTLQLRSGTELRLSRAYQEN
FFKVFNLTSI
>CPS_4172 GGDEF domain protein
MKFISHIIFIILVVPSICISMCQANELAKVPVLDEGETKKSNLLHIPPTK
MLPINPELLFLITQLKLKSIEKNKIEIALAQLTLSTAPLNPAEQYLLLVA
QALLKENANDKNSESRNSNNSSNIITVLEQAGKLSEQISEQQLAQPEFLQ
LHLLLADHYARQRKYDLAYLEKKSYLTTYNIYRKNKRIAMIASLEQSFEV
KDKKANNALMESQNKLKIRRVAEVQDEKAAQQYNFTLIISTGIVFVLILF
RQLRIRNKLILLTRTDALTGLSNRNTLFKHGEKMVSSFTEQPEELSILLL
DLDHFKKINDSFGHDIGDEILMAVSDLVKETMRSRDLLARFGGDEFVALL
PFADSNKAKAIAMRINEKISQYDFSSLVLQSRVTFSIGVATMADNKMSFD
DLLHDADLAMYQAKDQGRNTVICYQNISVAG
>CPS_5031 sensor histidine kinase
MEVIGTSGYFLAACAYAVFILLLLAARNKTLAGGLMLLAALLVFSSSLSA
ALQPKQGFSLLIVMAIETFKVAVWSLLIICTQANITSVKALISHPKVKQY
LKIFSGLSVLCWGAALFMPDSVKYLFSLFLLLNLWLLVLLEQLYRNADVK
VKWAIWSLIIALGMATVFDFVLFAQAAMVNQLDFSYWYARGFIAAIGMPL
ILVSTRRIKDWSVDVFVSREVVFYSSMLLISGLYLLLLAIAGYVINYFGG
AWGDVISIAFIILGGSVLAALLIAERLRREVKVFITKHFFANKYDYRVEW
LKSIEQLEIGENDDCYHTATHIMCSSLNIHQGALIKKVTKNHYQAIYQQN
FELEQSDLHFLIAVDQFCQQNGWIIDVRELAMVEDSYPGLVLDARACEQK
NIDMIIPIFMNKVVYGFFLLALPEEQGELNWEDRDLLFSLSKQLSNYLSL
NEANESLAESKQFDAFNRMSAFLVHDLKNIQAQLALVNSNAKRHRDNPAF
IDDVFETIESATGRLDKVLTQLRNKQVVESTKKTIDVQALIETVIEQRNV
QLPHISAQLAIDNMISIDEETFSSVLNHLLQNAQEATNESGWVKISAERI
CNNLHISIVDNGCGMSVYFIRNRLFKPFDTTKGNAGMGIGVYEAKQFVES
IGGTMQVASFENEGSIFTLVIPCSSND
>CPS_3300 methyl-accepting chemotaxis protein
MLKNLSLAKKIHLALTLIGAIFLSTTIFFFHHDEKELAEHFVERNLESLA
LNYFDSVNTMMLTGTIANRQLIQNKILSQDDIVEARILRTQAVNKVFGEG
FPDQSAKSAFEREGLAGKRAFKKFELDGKRMMSFIIPVKASSDYRGTNCL
TCHQVSENEILGAVKLTYDLSTVDKEITSSITQAAILQLVITLICFTLLS
LTLRKLIFFRLKRLSNSIKTAAEELDLNKEIKVNYQDELGSVSIALNDMM
SKFRISFMSIAQASEQLTESAKEVDKISSLTLEAVLEQKNGTDSVAAAIN
ELDTSANEVQHNTQSAADKSVSANERTSQGLILVEQARVGINDLRDKVVE
NTAMITDLSNKTNEVGSVLEVITAIAEQTNLLALNAAIEAARAGEQGRGF
AVVADEVRSLATRTRESIEQIHVTMSRLQVGAKGAVDSMNVVSQQASEKA
EDVANVADLLTSISAEIQELDELNCQISDAATQQNLAADEININVVNISN
VAEKSSDDAIRGKEISEHLLSLAYELNTQLTKFKL
>CPS_0998 FHA domain protein
MAAILNLNNKNEALSYLNACHCFGRSPTNVDTVINAQEVSRIHAVVEWNN
NQWLIRDLSNNGTWVNNQKLVKDNPHKLKVGDKIFFASGESHGFEIQDLR
PPQNMLLPIAQPGDCVTESPIVLTDGNLLPSEQNPEIALFYVPSKDQWYK
EFLIDTDGSAYPVANSDLLFFNNQKWQLKLIPLTENTVLMAKAKLSVDQI
KYRFNLSLDEENTELTVTTDDEKFCLANKAHHYLTLSLARHRDEDAKQGI
DADNQGWRLPETLTKELGCDITLFNTHVCRAKQQFRDMFDGACDGDELIE
RKGKKIRFAGVFYRIYKGNELIVNRGQDKVSLTVLHG
>CPS_4373 GGDEF/EAL domain protein
MIEFITPRTFLFSTQTVVFSVLLFVFYIFYRTFSRKYVKYWLMSIGALNF
SYLIKSFVPYSSRNFSSDSWQILAELLLQIFQYSFLIFLIFGVYIAKNNK
ELSKEILSGGIGAIIILSVISTMFFAFDPSQAFNHFYLTISLPSFIFGCT
FLSLACYLLFDKKSYFSSQVLMYFSAIFGLRYLMHSFISIVALTEPWFRQ
LELFLLYFDVAAHSILGFTLLIWMQGAERFATLSAISRAQYLGKHDSLTG
ALNREQVMAKLSDKMQELTHANKINKNQMKLAVFLIDIKQFKFINDTYGL
KVGDFILGEIASRLNHSVFIPQAVGRLSGDSFMFVIEFEQISHVDRAVNH
IHELIERCFRYEQQEITIQGSVGYCFYPDDADKSEDLLQKSNLALHHAET
NNIPSVAFEEGMQAQGRHLVLMEKQLRSAIANDEFVLYYQPQLNLFTNKL
EGVEALVRWQHPEKGLLSPGDFLTELETLGMHNEFDNYILVKACQASERW
FKLYQRRVAIAVNITAVEFQNEQLVTNIQMLLHKYGIPSKYIELEITENV
VMTDITRAMDSIVKLQSMGIKVSIDDFGTGYSSLAYLRDLPIDKIKIDRS
FINEVAINDSDLTIVKSMVDLSHGLGKRVLAEGVETIEQLNLLRHLGCDA
VQGYFISKPLPESKLVRYLKKK
>CPS_3952 sensor histidine kinase
MKLNNFFAENKMVDTKNNGEERKKLIYAGQMHLVHWLIVLLSVVLTFGAW
YYSKSQFNQKLEDKFQRNAEQVVSLVKERMQLYENALWSSVAYIDADETD
ITHTKWLAYSKSLKIDLTYPGINGIGIIYNIQADQLDDYIEKQRVLRPNY
AIHPSHNESEYWPITYVEPAAPNKKAIGLDMAFETNRYSSIKKARDTGVA
QLTGPITLVQDAKKTPGFLFYTPFYKNGTKPESTEARRDAIDGVTYAPFI
MKNLMQGTLAEKNRHVSIQIRDAGDLLFDDHDDESVLDADANPLFTKEQD
ISLYGRTWSFTIQSNLDFRDESAANQSSFILMGGLVIDALLLGLFLFLSR
ANRQALAYADHMTHALEEKTIHLEKSNSDLEQFSYVASHDLKSPLNAIKQ
LVGWIAEDCQDIIPDESKKHLALLAQRSDRMMKLLNDLLDYSRINRSEFK
SELVNLNEMSIDILHLIDKPPGFNISAPDIEIMIPRAPFEIVLRNLISNS
IKHHDEKSGYVRISCKSSSDYHVITVEDDGPGIPEKFHDKAMEMFQTLKS
RDKVEGSGMGLAMIKRVTEHYQGSISIVSDGQRGTKVIIHWPKS
>CPS_5030 sigma-54 dependent DNA-binding response regulator, Fis family
MEKLLIVDDDLGIQKQLKWSLADYEVVLAGTRESAIAAVRRYEPKVVTLD
LGLPPDAANASEGLAALKQILEISPHTKVIVITGNDDRTNALKAIEMGAY
DFYQKPVDADVINVIVSRAFSLATIETDNRSMKSIVGCDTGIIGSSESID
RLRLMVQRIAPTEITALLLGESGTGKEVTAKAIHKVSDRSDKPFVAINCA
SIPENLLESELFGFEKGAFTGAHKTTLGKIECAQGGTLFLDEIGDMPYQL
QAKLLRFLQEKIIERLGGRKEIPVDVRVICATNQNLEVMVSEKTFREDLF
YRITEITLNIPPLRDRDEDVLILANFFLQQYATEYKSSAKSFADDALYGL
RHHKWPGNIRELQNKVKSSVIMSTSNQVTAFDLGFFDKENAEYELSLNLR
VVREQAETIAIQKAYALTDGNMSKTSELLGITRPTLYSLIEKYQIAINV
>CPS_3674 transglycosylase, SLT family
MTKYLSFSIKTKLTSKLVTKFTSLLLVIFTTVLLSACDKENDSSSLSRIL
ARGYINVGTIFGPTNYYTTANGFAGFEYELAKQYADSLNVELRIVPTYSL
DELFIKLNTGEVDLLASGLSITDKRLQRFRFAPSYETISQKLVFKQGNVR
PRKVADLTGTLMVTSGSSYVENLEKLKQTNSELAWQESTEFDSEELLRKV
LSGEIDYTIIDSNNLAINRRYYPEISIGFSINEPEPLAWMVSENSHDDIL
ASLVEFFGTVHHDGTLLALDDKYYGHIEQFNYVETRTFIKAVAGTLPEYQ
PLFEKYAQELDWRLLAAISYQESHWNPTARSYTGVRGMMMLTLATAKQMG
IKSRLDTEQSIQGGAKYFKRMIAMMPDRIPTPDRIWFALASYNIGFGHLN
DARIITQRQGGDPDRWVEVKSRLPLLQQKKYYKNTKHGYARGEEPVQYVD
NIRRYYDTLSWLDEKAKEQAIALQLAQEKSQALLLNDIVNDSVNESTSEE
NATESILKEEEVTAETAQ
>CPS_4166 response regulator
MPSNFSDINALVIDNNSSMRQIMVSMLRVMGMKTVIVANSESQCMQLITA
ENINLVVCGWNLPKLNALSVLKKLRDNENTMKTPFVIVSTMIEQDLIKQA
IAMGVSEYLVPPFNKKIFEKRINKALKMPIQASATSLSRTINSKRFSQKV
HCGELNVLVVDDIADNIAIIKELIKDKYRVKAALNAKTAMKICLSDLPPD
LILLDIMMPEVDGLTLCKQLKENPLTQNIVVIFLTALSETEDVVKGLSLG
AVDYITKPIVPAILLARIEVHSKIILNQRTIQGQIDDFLQKNEIFVQYND
NTYNKLTRLLHDSAETLIELSPTVNTKPSRRSLSQLKYNIGMSTLLLDSG
HVLAKLQQNNYTLTLTKEKLGNLLFPILSIFDFIIASKNIEAFDNIDESI
NINCDKKLLGIIFACLYLNALDVAPRGSKVSITSASYQDFVLIKIHNITE
IPEEALDKIAHLSHSNKTNEVNDMSINLAFLVMNILQGELYFHSSKEFGT
TFYLKLPC
>CPS_2085 cyclic nucleotide binding protein
MLVIPDLHNWRKNLPPIALEEIQQTLTLKSYKTNEFIYSAGDDSNKCFQV
VSGEIKVCNYSLEGNELIISSLHANDCFGEMGLITGQKRINYAIAIKDVT
VNVINSSDFDTICLKHPQILMSLNKFLCNRLQMAFEMMEDAYLLPLYQRL
AKLLIKLALSNGESNPDGHIIIKNVSQESLGLMIGATRQSISRELKKMEE
EGMISFKYTQLIIPNIKEMINQFENILTHEPLVSSYSK
>CPS_3958 putative regulatory protein
MKPIDIKENKNPVESAQFGKTQDEPLSDKTHVQISDEATQWLLTIEEDDS
ENNQQALNAWLSLSAQHKKVYQQLQTLWEVADELPVDLFSEDLLGLSMTP
SSAVNTSSRVNPYALKKESILAKFISFFTLRKTMYTASFASVIFATFITF
TQYNREMVTTDKPLQVASSSTLRTNEYQTKLGEHKTITAQDGSIIVLAAK
SQVFIDYSANRRDIHLLYGEALFTVEKDKERPFIVHNHGRSVQALGTIFN
VRESKSAMQVSVLEGIVEVNVEPEVKSKVTNSSDKNQVATLVAGQALELD
SLGQFSTTYAIEVNERMAWQDGRLNYVNTDLANVIFDLKRYSTLSIHIPN
KQVANMGYTGSVIYDKVDDWLIALPYIFPVEVQRHGNSVVIVKRKE
>CPS_3925 methyl-accepting chemotaxis protein
MLKFKKINHKLVFTFLSLSLTPLIIFAYISINMASDSIQAQAFSQLESVR
SIKKAQISNYLSSLKASLQVLNDDPYASEAFNAFDQAITSAGLDSNAWRQ
AENKYADRFIKINKVNAWYDLFFINLQGDIVFTAAKESDLGINIPQSHIN
QTSLGDVFQKTQQNGVTEISVTDFKPYPPSNDEPAAFMMTKLINLSGKHI
GYIALQFPLNKVNEIMQQRDGMGDTGETYLVGEDQRMRSDSYLDPKGHSV
IASFAGDISNNGVNTDAVKSAFNGETASRIIIDYNGNSVLSSFTTVDLGD
FKWALIAEIDEAEAFETSNNLINISTGIVAAVSVVIGFIAILIAKNISGP
IVQAVAIAQRVSSGDLTAKIVVNQSDELGLLQQAMHDMIAKLKDMIEHIS
SSADQQATASQELSSITELTNTNVSRQHQATEQVATAINEMSVSIDEVTQ
NTAEASNAADTSTKLVKISSIAVNQTIDQILQLSDDITKSKVLIDDVQAG
TKDIANILVTIKGIADQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLA
QNTQNSTVEIEKMIKSLELNVSAATNSMVAGTTQAQLIVDKTNEVTQSLT
EVESSVAMISDMNIQISTATQQQSSVARDINQQATEISNISIETGESTKE
ISSASDELAALAVELTNQVQAFKI
>CPS_4675 methyl-accepting chemotaxis protein
MNKSVKTKIIFSTLLLLIITITSLLIVSSISVDKTATSLSEYLQPKIKES
SLMPMVIAADAETARNEVFFDQVINEADRLASDIAFLRVQFRALFLSAED
VRHILNMYIKSAIESNQSAVGVYAVFLPNALDGADEANKGADDLATNEAG
RFAVYWALNEQGEAIEEIMPEEMINDTSPNSTGQPYNSWFTCPIEKQQNC
LLEPYIDKVDGKNILMTSIAIPIKFANKVVGVVGIDIALADIQTKAEAFS
TKIADGNSRVLIVSEDNSVIADSNNSANQGALFSEIINSTQLNEGISEND
RSFTLVKRIHLGGITQWSIYTEIPKQYITDEVNQTMTVLDKGTEDQFTSV
LYMSLLVLIIGSIVIFFMAEKLTVPLRAVADALKQIASGDADLTQRIKVN
SKDETGQLAHSFNQFVEGLASIVGQFSEGVKTTFSASETGKALSTTTNSQ
LASQQLMIEMVATAAEEMSQTSTDVAQNAVSTADATKEVRSAASNGIIKL
KQTTSTISKLAEQMQYSNEQVDKLSTNSDNIVNVLNVIKSVAEQTNLLAL
NAAIEAARAGELGRGFAVVADEVRALAGRTASSVFEIEGVVNELQVSTKE
MVATISENVKRAEACTEQAQETQTIFEVIEQEVTNMTDMAANIASAAEEQ
SHVSEEISSTLQNINTTTDELTQSAQQTLKVSEELLVSGQDQEQLIGRFK
F
>CPS_1865 DNA-binding response regulator
MKILLVEDCQSVAEVIFDYFEESDFDLDYAATGNLGLSLAQSQKFDCIIL
DIMLPGLDGISLCQQLRAEGNNTPIIMLTARDTNDDMLLGLRQGADDYIV
KPFNLELLEARIHSVTRRHSGSGFITQMTCGPITLDINTHQVWRGKQEIK
LTPICFKILNLLVKNSPNVVSRQEIEEVLWSDDLPDQDILRKHVYQLRHK
VDKPFTDNIIETVPKLGYRLVPA
>CPS_1528 chemotaxis protein CheW
MSNERRSASDKVEANDEVLQWVTFKLENETYGINVMQVQEVLRYSEIAPV
PGAPLYVLGIINLRGNVVTVIDTRSRFGLEPCDITDNTRVVVIESEKQVI
GILVDSVAEVVYLKSSEIDVAPNVGNEESAQFIQGVSNRDGELLILVDLD
KLLSDDEWDELKQF
>CPS_2050 methyl-accepting chemotaxis protein
MLLSKRHSIQKKVTVLFISIVLLCTFGFAVLTSHTLSALSDEQISSTKKL
IQSSVLKSMNDAGNLSSERISKLLKQSFAPVLVLAETLSKTAQPSTPFNR
DVVSNLNRYTLEATPTISSIYTHFEIDGYDGLDSTFVNFGQHSTPTGSLE
VYWIKENGQASFYSTDNSADKYNSEKDDNGIRKSEYYLCSKDSLKPCALD
PYMYEIEPGREELMTTLSAPIIVSNQFRGLVGVDINLPVVQKWIIEQAKS
LFEGNVSISLFSQKNMIIASSLYPDKLSKKASDANSELSAILRAPKNSII
SGSDWHVKVPVFISEANVTWTLLISVPEKIALASVLEMTEKANESYNKAL
TELLFFSLLFLLCALFFAIWLARSITSPIKLLSFSIQELAEREGDLTQNV
TVESHEELILLAAGFNNFIKKLAEMISSSKKFSNELVDKFGELENIAHEV
ESDTQEQQLNLDSIATAMTEMATTSGEVAKLAVETANGGKHANSLLQETQ
NILEASVQNVQELEQNISLTSKQMSQVAAHSSDITGIVETIRSIADQTNL
LALNAAIEAARAGEQGRGFAVVADEVRNLAARTQTSTQDISNLIGNLQSD
VDKAVETLDANKESITSTVDKTSLSFEQLSQTLESIKLMSESTEQVATAA
EEQSQVAEDINIRLVSVSDSSTGLAELGQRLQENSAYSKGVVERIELELN
RLKC
>CPS_3713 putative phosphatase
MNIHPFETLALSNGAKLLFTPCPGTKAVNLEQSILQLKQQGVSMLLTLMF
DKEMLENNAIKLPLLCHKYKIQWLQLPIIDDEAPQEAFHQEWQKKKDRIL
NEIKNKGVVAVHCKGGTGRTGTVISLLLLQLGWSADKIKQEVQLIKPKAL
RIQKQINYLNSQLKNSADKF
>CPS_1938 DNA-binding response regulator, excisionase family
MSSKKSVKSYLTPKEVAELLMVSTAAVRLWAEKGNLKARVTAGGHRRFKL
DDIKEFAAKRNIELNVKMSENPKVLIVDDDIHFAEFLKALLKIEIENVEV
EISLDGFDAANKLHDFTPNILLLDLKMHGLDGFQVCQAVKENPLQNHIRV
ITISGNTSESDAEKLKNIGAETCLNKPIDIPVLLKQLALN
>CPS_0686 GGDEF/HAMP domain protein
MNISLLQRIFFFTLSCCLLFVLLLGSVIWSSQAIELAFSRNHYAKQLTNQ
TNTLKQLVANDNIYDSNYSINDWQSLEVKLTALLKSSPKLTEQQLTIQNS
LQSQNESLKNLFTLINKNKLKNASEVIKTHLKAKLMTQLEAIRSEALHLS
EIAQKDIYNTIQNQAVFIITISAVSILALLFGAFTLTSIVRKSLTEVKCA
FEKNHSGDYQNIQLSHHSQEFDSIADAFNTMNEKLSESTISLTEMKKIVE
ERTHVLEQLSRTDPLTKVANRRALFERANMEFSRAMRSKNNLTLLLLDCD
FFKNVNDEFGHLFGDELLIHICNICGQEIRDIDFLARYGGEEFIIVLPNC
DIAGGIETANRIQNSLARHCVAIEDKEVCVTLSIGISMLSERHKNLDQLI
NDADKAMYLAKENGRNRIEVLPAPNLH
>CPS_2363 conserved hypothetical protein
MKRTSKIRCFIYVLLIFSISATAKEPIKDIHYFGSKNKYSVELLQHVLSY
NSKKNYQLVPFTEKIPKDRAFAYMEQDELFDVIFAGATTYRLENHLAIEF
PLLKGLNGWRIPVVNTKNKDIFKSLTTLDDFKKLTPGLFHLWSDTEIMQR
NNIYVETGSSFNGLWLMLDKNRFDYFPRSILQVFNEIKNYPTLNIMIEKS
SMIHYPTAYYFYVQKGNNDLASDIKSGLEKALTDGSFDKIFTTYYGHLIN
KVKKQNRKVFALDNPLMPASTPLMRKELWIDLSSNRIN
>CPS_4819 DNA-binding response regulator
MPNSAIATVPSKLLIVEDDVIFANTLNRRLTKHGFDCVQVDNNNDALLAC
HRHTPDYILLDMKLAEENTLSIITPLRKLRPDSRIVLLTGFASIATAVDA
IKLGADDYLSKPVDSQTLLATLKGSKAETIEVDSKNEQTLSAEQVEWQHI
QQVLKANQGNISATARQLSMHRRTLQRKLQKRPQST
>CPS_1622 sensory box sensor/GGDEF/EAL domain protein
MKKLFTPAINLMNNLSYSRKFIVIGGLSLLALLIVSISLISYLSGSISTA
NQQLTGLHQTQNTSRLIQSLQQHRGISAAVIAGVYNSANGQISVNKKVND
NFLKISSALPFELKKIAKWSTIIEQWKYLNTKGITLELDENFNLHTKLIQ
NINSLQLRVADYYYLLVMDDLDSYYLTNSYLFTIPITLELLGQARAVGAS
YLVNKNKKSREKIDKYFSSTIVPLAVFKGNMHKVKRELLSDGEKISAQAL
IQTIEQHIQLTLDGILADSTSLSSLELYKLSTSAIDIGYQFLDNSLSFTL
SNLLKNRVKQANTELIVSIGFSSTLFLIVLYFLIGLYFSTIRSINYLTKV
TGKFYGGDLDARVTLYTRDELNSIALGFNEMASSFQNLLIEKEEISTRLL
AIIDNSPIGIWFTGTDGRYHFVNKTFCNLVGIEEEDMLNTPSSNLAELLG
SEIAHNCLDSDRAALGQDLAHVSYETIPRLNAKPYLLEITKVKLKNTRGK
VVGLIGISKDITNKRQQEDDLKLADIVYQNSSEAMMITNINNEIIAINPA
LSDITGYSTSELIGKDPKIFSSGKQSLQFYQSMWEEIKRTGTWQGEIWNT
RKNGDEYPEWLSINTIYDDDGKVFRRIALFSDITEKKKKDALILRQANYD
SLTNLPNRRMFIDRLEQEIKVSHRKKQKFALIFIDLDNFKNINDTRGHVF
GDQLLTEAGKRITHCVREVDTVARLGGDEFTILLSDLSEIYNVESICQKV
LLALSQPFCISKLYTYISASLGVTIYPNDASTTLELLKNADQAMYLAKDL
GRNQFCYFTASMQEQAQNKLELMNDLRTAISLNQLAVFYQPIIELQTGII
RKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHIKEC
KKQLGLDIQISINKSPVQFRETVSQLDWLTYLTENQLSGKNIVIEITEGL
LMNNNTSTMEKLSRLRAADIKLSMDDFGTGYSSLSYLKKFELDYLKIDQS
FTKNLAQGSEDMILSEAIITMAQKLGLKVIAEGIETEEQRKLLLDSGCDY
GQGYYFSRPIPADDFLQLLARTSEI
>CPS_4985 sensory box/GGDEF/EAL domain protein
MLKRLLISCRLLLSIFFSVIFFSVIFIGGIVASSTSYAAIENLSLELLSV
DDGLSQGSIHSIIQDKAGFIWLGTESGVNVYDGNEVRQLPGPKNSFENVA
IYNVLEDKNGFIWLNVDGRKLYCYKPKTDSYQHIPIKLAQGFDYYIRDLI
NDYDNKIWVLTSKTLGVYNQVTDEYKQVVDLESELAGNLSLFQMSLYDGV
IYLASKIGIFAYDIEKNHWKKLPQIPADISKQSSIEELNKIYTVHADNNH
TLYLGSFDGFFAINVADIKAYIAEKSQLPNYQKLIENMAAWQTLLDGEML
YVASDKGLYVINTLNNSSEFLFGFSDYFDNITDDNIHTLIKDNHGVFWLG
SNTAGAYQWDPQKELVKNYGYKKNNPASLSYNEVWHALPDSLNNDLLWVA
TSNGLNLIDLTKQQVTPFLVNDDSKSIYTQSHIYSLVTLSPEQLLVSTAQ
GVLLFDKKQEKTLALPFNDEVNQLLALEQFDILKEGDFLWLTNEKGIFRI
NLITYQVDTLSEITTQFSPERLLYFLGSLPNSDWFLLTSNDGLWGFNVNT
REFVQLYQLEGILAGENVYIDNWAIDKNQVLWLSYSGKGLIGLTLPDFKE
KYFYHKANSIIENNVYGVMADESGDIWFSSHDGIFMLDSDNQHISHFTRK
NGLGATEFNARANAKLANGLFVYGSMEGISLFDPLQLKKIYDNENITVKV
TAVELLSRDLVLPLVIENNAVINLNHDDVGIRIDFSTFSYGNEKSIIYKY
HLTGQDNIDFPASREAHVTFPSLASGKHTLSIQAKSPYTGEFSSPVYIKF
NVGFAPWRSPLAILLYSIALMLMMVTWYRYRKTQQQLLLDVHEQVKYREN
RLQLALTGSNSEVWDWQADEDLIFGKRISLDLGYREKALFYSLEEHVALI
HPEDHDNFIHCWQLFISSANLKDNFSCTYRLKTSDGQWFWYKDLGKIVAV
DANNHPVRVTGSYTNITESRANEERAQYYGDAFQQTQDWVFIIDEKISRI
TANQSMRAVFDWPEEEFDFSDKLLGVSQKRRSFYRKLMLSLKEGEHWRGE
ELIVTANKDEYHVIINVTVGFSSVTNALHYLFVLTDISAQKSAESELRLL
ANYDHLTGLPNRTLLLERIKHAIDFSNRRDTSIAVFFIDLDRFKQVNDSL
GHDFGDLLLREITNRLQSTLRIDDTVARIGGDEFVVLLESFANENQLGRI
AEKVIDTIGQSVDLDGNLVSVGASVGIALYPNDGINSDELLRHADVAMYH
AKQAGKSNFKFYTAQMNVEAMERLSQESALKLAVKNNEFINHYQPIINAY
TGKAVGVEMLMRWQTSTGLVPPSDFIPLSEELNLIITMTEMALERVCKDL
KEWHTIRPEFYVSINLSVQHFVEADIVSFISELLARYQLPAAILRVEVTE
SSLILQPENAITTMRKLSSLGLTLALDDFGTGFSSLSYLKKLPLDIIKID
RSFVAGIGINEADEAIVDTTLVLAKRLNMHCIAEGVETVEQFNYLVAKQC
HYLQGYLYSKPSSAEKIMKNLLIDKTELTYSQAL
>CPS_4696 sensory box/GGDEF family protein
MTFLDKGLAQGEIDTGILVLNLNGELEEVNEQFLAMTGFLKENVLGQNID
EIDNCSAKKILSGKSAIYGHYHSILTRKDGSNLQVETCYFRQQTQNSAQI
LLFIQESNYAELTKTSIIEQIFDHTNEAIIVTDNQGLIQTVNKSFSNITG
YSEEEVIGKTPAILNSGKQDKYFYKKFWQQIIDQGSWQGEIWNKRKNGEV
YPEWLNISSIRNKESQISNYICQFTDITNRKKSEEELHFHAYHDSLTSLP
NRHLLFEKLNHLCVLHQEQPTYFAVLFCDLDRFKMINDSLGHDVGDELLK
SVANRFEAKLRDNDIIARTGGDEFIVVIEGEKALKNLDKICLQILSLFEV
PFQTKYGEFKTTISIGVSQFPSDSEDVRELISFADVAMYKIKKSGGNHYS
FFDVKEKALIQQRLELESEITQAIEKDQFAVWYQPQVNTQTHEVYGVECL
IRWNHPEQGLIPPDLFIPIAEANGSIKELGYFVLKTACQQLRQWRIKNIF
TGVMAINVSLRQFERNDLLAQVKKTLVDEMLPAESIELEVTESLFSEDNN
YHTPILCALRELGVKVAIDDFGTGYSSLQRLKSLPIDNVKIDKCFVDNIE
HCPEDVAIVMATILLSKTFKVDVIAEGIETQEQADKLSDLGCFNQQGYLY
SRPLKAHDFEVWLADFSLKNNEIKTLKAINHL
>CPS_3172 DNA-binding response regulator
MPDSNSSVKKILLVEDDRQLSDLVTDFLTSEGFHVKQEFRGDTVAKRVKL
FSPDLIILDVMLPGKDGFGVCRDLRPEFNGPVLMLTAKSTDFDQVLGLEI
GADDYVIKPVEPRVLLARVNALLRRGDLPNQSEEKGEITCGGLYINKASR
KVTLQDENVDLTSQEFDLLWLLAGKAGEVQNRDYIYKAVIGREYDGLDRS
VDVRISRLRKKLHDSTDTPFRIKTIWGQGYLFVPDAWS
>CPS_3839 methyl-accepting chemotaxis protein
MKKMLGFRSALIVSMSGLIVFCLLVSNWMSYNEIRNNTVENVNETSQGMI
RYEADKVETWFQSKAKLIDELANNYVNGSYQDNFVGIAKLAQTAGDVTAI
YIGFDDGRAYSTSVGDAWVDGVAKPELYDPTKRPWYSQAKASNVLDITAV
YPDATTGNDVVSIIKVMNDGVALADIELTILGDTVKGINQPGAISVITDE
EGNVLASTSKIVVVGTPFRNAGMAELEREMLSQDEMMKDYTLNGVDKIAF
TKSIELVNGKKWYLFVGIDKSVAYASLDTALNQAVISSIVMIIIGIAVLL
LVLQALYRPILLLKEMVHDLSKGNGDLTSRLPVKNNDDLGLISENINLFI
EKLQRLMLDVSQSSTEIDVSIKKLRDEVDSNGTILNAHMIETDQIVSAIE
EMSVTAKDVAQNSNDTAAFTQTTNTQALKSKESVGEATAIVARLVNEVEN
TANSISEIERNTSDINNVLKVIGDIADQTNLLALNAAIEAARAGEYGRGF
AVVADEVRALAAKTQDSTTEIEHTLLQLREGSSSAISTMGSTKSTCLEVA
KSTEVVAGDLGSINESVSQINDLNLQIATAAEEQSCVSDEIARNMTAISD
MANELVVNGNNSLDQTIELANANVNLKALVAQFKLS
>CPS_0650 sensor histidine kinase
MKTSLYQRLALTLCATFMVMASLLVAWSNSLVQQSKYQAEQKLHVNLAEH
LAHDNPLLQDGVYDKAALENLFHTLMLLGPSFEFYFLDTQGNILTYSADP
AKIKRKSVSLIPLKKLIDKPQQVPVFGDDPRDINNKKIFSASPVYQGELL
QGYLYIIIGGEIYDSIFSQVQSDKDLQKYGAFVVAGLFLFLLVLLAVFRY
FTRPVRELATQMQALKAVKFDQTKVELKQWGSESSQNIDSNEVHFLGATF
NDMVVQINQQFSLLTENDRIRRELLAHLSHDLRTPLATMQGYIEILAIKG
DNLSSIEKQDYLATVQRNVSQLKRLIDQIFELAHLENGQVTVNLETFPIG
ELLHDILAKFTLKAAEKNIALTLQPQPCQFIVYSDIAKLERIMTNLLENA
IRHTDNGGDIVMTVTQLSTQVKVSVTDNGSGISKEDIAYIFDARYRASNA
IEDSTQHAGLGLAISQKLSQVINSELMVKSELGNGSSFSLSLPMLP
>CPS_1118 aceK, isocitrate dehydrogenase kinase/phosphatase
MKDELALTIANTIINGFERHFAIFTEITQSARNRFQQCQWNEIHRSARAR
TNFYDERVKETFNDIKEDFNISSLDDALWQRVKAVYSDLLINHKQPELAE
TFYNSVFCHLFERKYYHNDYIYVESTAHRLDDKTQPEIYTSYQPKELGLK
QTICDIMNSHRTVIPFEDLDRDVDALINTFRRKAHKTRVKLEDLKFDILN
FTFYRNKGAYLIGRVLSPAGETPFIIAVLNNEKGGLYIDALLTSSESMAV
VFGFARAYFFVDCEHPYALVNFLQGLMPHKTKADLYSAIGFHKQGKTQFY
RDFLNHLDSSDDQFELAAGIKGMVMSVFTLPSYPYVFKIIKDKFSPSKNI
TKKDVKGKYRLVKLHDRVGRMADTMEYSEVAFPKSRFNDELLAELQKVAP
SIIRYEGEGEEALIIIEHLYIERRMVPLNLYLMDALKNKAQQKIDDALFG
YGQAIKQLISADIFPGDMLLKNFGVTRHGRVIFYDYDEIAYMNEINFRVK
PKAVTEEQLYAAEPWYSVMPGDMFPEELATFALANPSYLKAFKIHHEDLL
TAAYWQQCQQDVANGIYKDVFPYPDKYRFCNLSFGSIKR
>CPS_4496 arcA, aerobic respiration control protein ArcA
MQTYQILVVEDEDVTRFNLRNLFEAEGYVVFEAVDGNSMAEQLRLHTINL
VIMDINLPGKNGLLLARELTANKDLGLIFLTGRDSDIDKILGLEIGADDY
LTKPFNPRELTIRARNILSRIGQTSTEAEQSIVSFNQWTLDGNSRQMTSP
EGEVIAIPRGEFRALSLLIKNAGKIISRQELIKEMTGRDLRSNDRTVDVT
IRRLRKHFELNQETPELINTIHGEGYRFVGILD
>CPS_3305 baeR, DNA-binding response regulator BaeR
MSHILIVEDEEKIASLLADYLAKAGYQTTIMHEGTEVVSTVKNQHFDLIL
LDLMLPGKDGLTICREIQEFSNIAIIMVTARVDEIDRLLGLELGADDYIC
KPFSPREVVARVKTILRRINPPLTTGINTNIAKQSQTTTVELNTDNYQAT
INQHPVELTAIEFNLLNILASAPGRIYSRSQLIDRVYQDNRVVSERTIDS
HIKKLRKKLNAIESDNELVQSVYSVGYKLVLT
>CPS_3304 baeS, sensor histidine kinase BaeS
MKIFTKLILTLLFISLLLLSIIYIAVQWSFDRGMLDYVNKKELASLQLLS
NNLATFYQQEQRWTTLVAASNNNRRPPPRKHERFSSPPVQNDQFRPSQTW
RKLLKLSHDGVKLPTDVRQYLAANDDFMPKHNRPPPRSNFQRSSRPEDRQ
PRPPQNQGALHPSLLDADKQLILGRMTPDFSLQAIHLNGDLIGYLALPPK
TKLTDEFDLAFLAQINANLLYIVLGLFLIIIVIAVPLSRHFVRPIKRLEH
AMRSLNNGNFKVKTDVIGNDELASLSLHFNDLAKTLEQNESSRNTWLANI
SHELRTPIAIIKGEIEAIEDGIRPLDLNSLSSLNDEVNHLHKLVNDLSAL
SNAEIGAMRYQKEQLNLADIVKHNLLRHQQQASELNITISQQLISSDVII
WADETRINQLIDNLINNSVKYTQTLGTIHLSLTKETSHVVLTISDSFPSV
PDNSLPKLFDHLYRVESSRNRKTGGSGLGLALCKKIMSAHQGSIKASHAK
QGGLEISCTFPLIT
>CPS_0712 bolA, bolA protein
MTVASVIEQKLLDAFQPSHLDVINESNNHNVPPGSESHFKVVIVAKAFEN
ERLIKRHRLINNVLSQELAEKIHALALHTYTEKEWQEQYAGKAPSSPNCL
GGGK
>CPS_1522 cheA, chemotaxis protein CheA
MSFEADEEILQDFLVEAGEILESLSEELVELENDVDNAELLNSIFRGFHT
VKGGAGFLSLGDLVDVCHGAENIFDLLRTGKRSVNAELMDTILSALDTVN
DMFVMVQNKEPLVPADATLLAELARLSHPDVSTPAVTEVIEQSTPTNEES
SSSDEMSEDEFEKLLDELHGSGSVSASPNLSEPAPYSAPTPSTDGASDEI
SDDEFESLLDELHGQGAFSVDAAASTNSALSTSSDDIDDLEFEKLLDELH
GKGNAPKAVESSVTNKPVSIPTPSPEKEVKAKAAVPKKVAQKKPAQKKSQ
EEPAKVIAKKAAATPAPQGETTVRVDTKRLDQIMNMVGELVLVRNRLTSL
GLVSDDENLNKAVTNLDAVTTDLQGAVMQTRMQPIKKVFGRFPRVVRDLA
RSLNKDISLILEGEETDLDKNLVEALADPLVHLVRNSVDHGIEAPDTREA
MGKPREGTVLLSASQEGDHILLTIKDDGAGMDAEKLKNIAIDRGVLDEES
AARMSNKEAYSLIFAPGFSTKTEISEVSGRGVGMDVVKTKITQLNGTVNI
DSELGVGTILEIKVPLTLAILPTLMVVVGKQTFALPLASVNEIFHLDLSN
TNSVDGQLTIIVREKAIPLFYLDQWLVRDFVKTSRDKGHVVIVQLGNQQV
GFVVDSLIGQEEVVIKPLDRLLHGTPGMAGATITSDGGIALILDIANMLK
FYAKKSPINKRLRN
>CPS_1523 cheB, protein-glutamate methylesterase CheB
MAYKVLVVDDSSFFRRRVTDILNKDPKLNVIDVAVNGQEAVDKALLLKPD
VITMDIEMPILNGIEAVRKIMAQSPTSILMFSSLTHQGAKATLEALDAGA
LDFLPKKFSEIAKNSDEAGSLLRQRVVEIARKSEFSKQRTRTRPAAVNIS
PKSSRLIADQHRPLASTSSLVTKDKKVMAAITRSSGKEYKLLAIGTSTGG
PVALQKILVQLEENFPLPIIIVQHMPAAFTAAFASRLNSLCKISIKEAAD
GDVLKPGCAYLAPGGRQMLISGSENSAKIKILDDDSPKITFKPSVDISFG
SAAKTFAGKVLGVILTGMGSDGKEGARMLKAKGATIWSQDEQSCVVYGMP
QAIDKAGISELSLSLDSMAASMVKEISRG
>CPS_1476 cheR, chemotaxis protein methyltransferase CheR
MSARELDEKSYNQFRTFLEQQCGIVLGENKQYLVKSRLAPLMAKFELSSL
TELVNRTLTPVERQMRAAVIDAMTTNETLWFRDDYPFKLLQSKLLPDFAN
RKTPVKIWSAASSSGQEPYSIAMAVLEYQQKNPGAFPRGVQVIGTDISTT
MLEHCKYGHYDSLALARGLSAERKKRFFEPGDNGMLKIKDEVKKMVSFRP
LNLLNSYSLMGRFDIVFCRNVLIYFSPKIKTQIISQIHGVLNNDGYLFLG
ASESLSGINQDFTMLRCNPGIVYQKK
>CPS_1474 cheV, chemotaxis protein CheV
MAGILDSVNQRTQLVGENRLELLLFKLNGRQRFGINVFKVREVMPCPRLT
LLPKQDSFIKGVAHIRGQTISVIDLSLSTGGRAIEQTAESYIIIAEYNRS
VQGFLVAGVERIVTLSWADVMPPPEGAGKSSYLTAVTEIDGQMVSILDVE
KILNEISPVSTEVSEDIIDVSIGENLGDKLVMIADDSTVARNQVRRALEP
LGINMVLAKNGRDALEQLLAIEATCENCITEKVALMISDIEMPEMDGYTL
TAEVKGNDRMSKMPIILHTSLSGVFNNAMVEKVGAEDFIPKFHPDELATA
VKKWLKIED
>CPS_1520 cheY, chemotaxis protein CheY
MDKNMKVLVVDDFSTMRRIVKNLLRDLGFTNIQEADDGNTALPMLQGGDF
DFVVTDWNMPGMQGIDLLKAIRADANLSHIPVLLITAEAKKEQIIMAAQA
GVNGYIVKPFTAATLKTKLDKIFERLA
>CPS_1521 cheZ, chemotaxis protein CheZ
MTGRISLEQARSLVAFLESDEQDAADAIIAEIQNPINSELFAEIGKLTRQ
LHDSLTNFQVDSRLNDLATTDIPDAKERLNFVITRTEEAANKTMDAVEAI
FPVVDTIAEQVATVNPSWTKLMNNELDLKEFKSLCIDIDTLLKNTGKETQ
HIHSLMTDVLMAQDFQDLTGQVIRKVIELVREVEESLINMLTAFGLSAEK
TQGPSNPKVGENLVEGPIVNAANRDDVVEDQDDVDDLLSSLGF
>CPS_1749 cpxA, sensor protein CpxA
MFKLPPAWSKKFSLGISLKLFLAFWLVILTSVLISYLVTMQFRHSPIQEQ
ANPQQLKLLKQYTQKLADKDQVRLKKVQENFRRKYHQYLLIKKISNNKVY
TPRKRGWSEVRDYLTKHPLENPVTVDFAFTKVTSSEPIIINGEQFQLFIA
NEVHRKRLVSLVNQLPVALRLLMLLTISFLSCWLLAKSFTNPLIAIQKAS
ESIGEGKLATRITKFDQRSDEFGTLARSFNKMAEQLENNITAHQRLLGDV
SHELRSPLTRLQLAVALAEKNMGNDVEQQKHLNRCETEVERLDEMIADVL
TLSRLEHNQNVFAADDIDLSTLVAQVVNDCQYFATSRNVTIVLKTQANCA
LLADSKLLSSAISNVVNNAVKYSPNDQVVTVELRQINEQIMLIVSDQGPG
VPNEMIEKLFTPFFRVADGRERSSGGTGLGLAIAQQAILFHQGDIVAQNQ
ESSGLKVIITLPTLSKQNKSNT
>CPS_1750 cpxR, transcriptional regulatory protein CpxR
MTQSTVQTKHILLIDDDAELSELLTEYLESENFKVTSCLDGASGLAKAFD
DSFDLILLDVMMPILNGFEVLKALGGNHKTPILMLTAKGDDNDRILGLEL
GADDYLAKPFKHRELLARIKAILRRISIVKSQSTLAVNAPTKQLTINQVK
VNQATREITCRERLLELTGTEYLVLVYMIENHSKIISKAEISEKVLQRKL
SPYDRTVDVHVGNVRRKLLAIDPIDKMKTVRGAGYVFLQGEE
>CPS_1043 csrA, carbon storage regulator
MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEISVHREEIYMR
IQAEKGDNEASGNKV
>CPS_2012 dctB, C4-dicarboxylate transport sensor protein
MVYQGQSERKNYIVATVAVIGLILTIELTQMIGMSNAYQQMHQQSSQQLS
NLVGYIDNILGRFDRIPKVLSKHPLLSQALISPNEQSKITKLNQLLADIR
TMTQASDIYLIDKKGITIGASNWQLPNSFVGMNFMFRPYFQDALKGKLSH
YYAVGLSSGKRGFYYAYPVVVDGVIAGVIALKISIADIEEQYKKTVLNDS
FNFLIVAPHDVVFISDRPEWRLKTIGNLSKAKQLNLIAEKRYTDKEISSL
NVEDISNHYLPNDLGSELLEVTSNTGSEEVFALNKLMKTANWQVHLWSSV
APMKKQQNLLIILSASGYLLMVFLLLFTNERLKNARRLKQSQQLLEKKVK
ERTSDLSASNVKLHEEIAQRQQAQTQMNKMRDELIQSEKLALIGSMSASI
NHEINQPLTALRSYSENALAYQERSMTDKVKNNLSLIIGLVDRLSDIVSQ
FNSFSKKSTGVATAVDVQMSLMAAMSIVKHQAKAARVEFTSKPCLETVHV
YGDAIRFEQVLVNLLSNAIQALSEQEHKQIIISVSDVKEHVIIEIRDNGP
GILVDNIDRVFEAFFTTKENFGLGLGLSISHRIIESMQGQLNVSNHPDGG
AIFTISLPVNR
>CPS_2013 dctD, C4-dicarboxylate transport transcriptional regulatory protein
METEKLGVVFVIDDEEHIRSAIEQTFELRNFEVQTFSQAHQLLNQLSDTW
PGVVISDINMPKMDGHQLMAEVKNIDSELSTILLTGFGDISMAVKAMRNG
AYDFIEKPFNNDDLVDTVKRALDKRSLVLENRQLKKEIETHCLPGPRILG
NSPNIVQMRNILNQVMDAPADIMIDGETGTGKELVARYLHDHSIRRDSNF
VALNCGAIPENIIESELFGAEKGAYTGADKKRIGKFEYANGGTLFLDEIE
STPMALQVKLLRVLEERKVVRLGANEGVELDVRVIAATKVDLLELCEQGL
FREDLYYRLNLVKVDIPPLRERIEDVPLLFLHFARIASARYKKELIPLSQ
EHKAQLLSYGWPGNVRELRNLAERYILLGEAAAFNLKKNTSANSMNSSMG
LTQRVEFFEKFLIEEALASNEGCIKDTMEELNLARKTLYDKMKKYELERT
TYQ
>CPS_4306 dksA, DnaK suppressor protein
MPTNKHKPLGILALAGVAPYQEKAGEEYMEEPQQEHFKKILDAWRLQLRE
EVDRTVSHMQDEAANFPDPVDRAAQEEEFSLELRTRDRERKLIKKIEKTL
QLIEDDDFGFCKSCGIEIGIRRLEARPTADLCIECKTLAEIKERQMAG
>CPS_4596 envZ, osmolarity sensor protein EnvZ
MKILPRSAFGQTVLLIGFLLFINQIVSYISFALYVIEPNQQQMNQLLAKQ
VRVVFIDINDAKLSPKMAKAFHNETGIGVYREEDAYKFGLANAGLYPYRS
EQMSALLGGPAEVRISQGDEYLFWIRAPQAPHLWVKIPLIGMEKGSFSPL
IFFMVVIGLLSVMGGWVFVRQLNRPLKSLEIAAEDVGRGDFPDPLIERGT
SEVMAVTQAFNHMSKGIKQLEEDRNLLMAGISHDLRTPLTRIRLASEMMN
ESDDFLKEGIETDIDDMNNIIDQFIDYIRHDSKDKAELGDLNLLVDEVLN
VETPIDRVITFHPGECAKIPLRHVAVRRALANLVQNAIRYTTDEIEVFTG
VEKDYAFFIVSDNGAGIPDADIERLFQPFTQGDTARGTEGSGLGLAIIKR
IVDTHGGKVKLSNKPSGGLQAKVYLPLVFK
>CPS_1498 flrA, flagellar regulatory protein A
MIDNPVVTSVVTGHKQILVVDNDAGRSQQLSTVLAFVGEHFIHCSQEQAI
EKLADCSHILTVILTGNVSHDCTALIKVNPSVPFILHDVLDANELVVNVN
VIGTLAAPLNYAQLTEQIHHCHQYHNKLPRKGNKLSSSALFRSLVGSSEP
MAQVRFLIEQVAKTPASVLVLGESGTGKEVIARNIHNLSDRAKEAFVPVN
CGAIPAELLESELFGHEKGAFTGAISTRKGRFELAEGGTLFLDEIGDMPQ
PMQVKLLRVLQERTFERVGGSKSIKANVRIVAATHQDLEEMIKEGSFRED
LFYRLNVFPIDTPSLRERKEDIPLLLKELLTRFEHEQNKTVRFTEKAIES
LMEHPWPGNVRELSNLIERMLIMYGDQIVDVTELPYKYQHVDVQAYNPEY
PEELQEHDVINELFGGFDYDDDDNDDESEQGELTAGSDINGVQSSTDATL
LPSDGLNLKEHLAELEVSLINQSLSKHDYVVARAAETLGMRRTTLVEKMR
KYDLHKPSE
>CPS_1499 flrB, flagellar regulatory protein B
MAQVMSQANPTVVPSNASIRESSANAAFHSVNIVGANKPSLLAHEAFPGE
LAALRAQASQSTKHNFSPRKIANTKYLHSSTSEKQSLSNNLLADQLIEVM
PTGLVMLDGNGIVVKINQVARNLLDEPILGQPWFNVIARSFDPREDDWHE
ISLKDGRRVKLEITSLGSQPGQLIMITDLTETRLLQDKLSQMQRLSSLGK
MVSTLAHQIRTPLSAAILYSENLSNNKLAENYRIKFQGKLNARLHDLEQQ
VNDMLLFSKSGKEQVVTSVDVAELINDSVNSMDALLDKANTKVKVQLPDN
ELHMLGNKNALTGAIQNLLHNSLQAISSNKISEPLINIQVYSQANHLYLS
FKDNGPGIDADVIDKIFQPFYTSSSKGTGLGLAVVKSVVNAHQGEVSLLN
EANSGAHFVIKLPLLEQGNVMKNSPSESVND
>CPS_1500 flrC, flagellar regulatory protein C
MTEHKILVVEDDAGLREALIDTLSLADYHCVEADSGEAALLALKSQHVDI
VISDVQMGGMSGLSLLKSIKNHHANLPVLLMTAFGTIDDAVQAMKDGACN
YIAKPFAPQVLLNMVSQYIPPQVVNKNDPIVADKRSLELLTLAKKVASTD
ASVMILGPSGSGKEVLAQYVHNHSKRSTQAFIAINCAAIPENMLEATLFG
YEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQAKILRVLQEREV
ERLGGRKTISLDVRVIATSNRDLKVAVNDGVFREDLYYRLNVFPLSWLPL
AQRVDDIFVLAQHLVSLHCQKNGDSIPEFSGAARSKLNAYHWPGNVRELD
NVIQRALILHADQIIDAGDLLIENFDTALVVEPEQVTNKDDKLGSELKLQ
EHQIILDTLQACHGSRKDVAERLGISPRTLRYKIAKMRDSGIEIPA
>CPS_1987 fnr, fumarate/nitrate reduction regulatory protein
MQNKSCPTIQHIKCQNCSISELCLPFSLNDKELDSLDSIIDRKRPIHKGD
KIFHDGQEMHALYAIRSGTFKTFTVNEQGEEQITGFHLAGDLLGFDAIAE
SQHPSFAQALETSMVCEIPYTNLDELSNTMPKLKKQVLRLMSHEIKTDQE
MLTLLNRKNAEQRVATFLVSLSERYHARGLSSTEFRLTMTRSDIGNYIGL
TVETISRLLNRFHKSGLIKVDGKLISIIDIDKLCDTAAL
>CPS_4185 glnE, glutamate-ammonia-ligase adenylyltransferase
MTLSFSPLLHDQQKISWQQFSDQHADACNELTQDQLSAFKQAITLSDFIL
NSALQAPELVLELFQEPNEEALPDYKSLLAGQLSPCTDEVQLHRILRRFR
LQHMVKIALDDLIFSISLDISLARLSSLADELILASLQWLTDFCQKKWGT
PTNEQGENQTLLVYGMGKLGGKELNFSSDIDLIFTYPESGETQGCRRSID
NQQFFTRLAQKLIASLHQVTCDGFVYRVDMRLRPFGDSGPLVLTFNAMED
YYQEQGRDWERYAMLKARVIGESKYHEQLSSMLRPFVYRRYIDFSVIDSL
RRMKMMIAQEVRRKQLINNIKLGAGGIREIEFIVQVFQLIRGGRVKELQQ
RSLLIVLPKLVDSGEINAANKEVLENAYRFLRRVENIIQALADKQTQTLP
DNELDQQRLLTVLAIKTWPEFLVILAKHMDGVHQEFDQLIGLDSPNHQAA
DEHWVTLWHSRWSDEESIAWLEQEAHSWESDKVWQILHDFREDTSKRSLG
NRGRQVLDKLIPLLLCRLQKNEMAEQVIARVLQVFSKIVTRTAYLELLFE
NEGALKQLIHLCQASSWVTDYIAKYPILLDELIDPKLLHNPPQLSSYGIE
LRERMLRIPEEDLEAQMEALRQFKQSQQLRIAAAEIADVLPVATISDHLT
SLAEAIVSEVINLAWQQVSERFGIPTSCLDGAKEKGFGVIAYGKTGGVEL
GYSSDLDLVFVHHSEASEDTTGRADGSKVIPASQFYVKLAQRIMHIFNTR
MNSGILYELDMRLRPSGNSGLLVVHLNTFAQYQHEEAWTWEHQALVRARM
IFGNEKLQQQYINIRQDVLSKPRVFLELKNDIITMREKMRSHLDKSSESL
FDIKQGKGGLVDIEFLAQFLVLAYATQHRELMLVCDNLGIFKTLLKLDLL
EKSEQQQLSNMYQKLRALGHQATMQNAGQLINRESIVGEKAIGDIWQNRL
VD
>CPS_0117 kdkA, 3-deoxy-D-manno-octulosonic acid kinase
MSQTITSAQFSKFEQGNVTCVYNQTLITNFNAAMLSPSYWQQSNAVTGSA
QGRGTTWFVEYNDNSNTPHDWVLRHYYRGGLIGKIIKDSYWFSGVEKTRA
ACEFALLRHMNTLQLPTPEPIAYRVMQHGFHYQADLLSSRIEHAQDLVAI
LSEKALTDDIWHNIGATIKRFHQHGIYHHDLNSHNILLNDKKQVFLIDFD
RGELRTNPVETNWKQANMARLQRSFLKELNKLEQFNFTEQNWQALKDGYQ
DADVERQN
>CPS_0237 lexA, LexA repressor
MIDSTTELRPLTKRQQQIYDLIKAKIQDTGMPPTRAEIANFFGFKSANAA
EEHLKALAKKGYIEMLAGTSRGIRLVEEMLEAEGLPLIGRVAAGEPILAQ
EHIEEHYKMDGNLFHPAADYLLRVNGESMKDIGILDGDLLAVHQTTEVQN
GQVVVARVENDVTVKRFKREGNVVYLHAENEDFSPIKVDLANQEFNIEGI
AVGIIRSGRWM
>CPS_0398 ntrB, nitrogen regulation protein NR(II)
MHSRSYIQDHKLSYQQSLANQLVTAVIILNEKLSIVYVNPAAEALLNKSL
YRLFNTESEMIFANTSINRSRLIQLLATGQEFTDCDIVVELNESHRFTAE
VTASSVEFERTPHVLLEFKQIDQQKQISLEVFQHQQWLAARDLIKGLAHE
IKNPLGGLRGAAQLLSKEVTSEQQEYTSMIIEQADRLTNLVDRLLGPNQL
PQMQAQNVHGILEKVCQLVGYSNGQKIHLLRDYDPSLPAVECDQEKLQQA
VLNIVNNAIQAIDEKHNITLRTRIASNRTIHGKRIKLAIEISIIDNGPGI
PTKIQDTLFYPMVSGRSNGTGLGLSISQTLINQHQGKLSCHSRPGHTEFT
ILLPLKQQPLNRAPLSQESTL
>CPS_0397 ntrC, nitrogen regulation protein NR(I)
MITEQVWIVDDDSSIRWVLEKAFANANISCAAFESAENLLIALEHGQPEI
IISDIRMPNIDGMELLKRLNKQHSHIPVIIMTAHSDLDSAVNAYQGGAFE
YLPKPFDIDEAINLSKRALTHAREQNEKNKNQKDIPLAVGLIGEAPAMQE
VFRAIGRLSRSSISVLINGESGTGKELVAQALHSHSPRVNEPFIPLNMAA
IPKDLIESELFGHEKGAFTGANAIRQGRFEQAHGGTLFLDEIGDMPLDIQ
TRLLRVLSDGQVYRVGGHLPVQVDVRIIAATHQHLEERVKKGEFREDLFH
RLNVIRIHLPSLRERKEDIPQLSQHFLTQAANELSVEVKTLSKKASNFLN
NCHWPGNVRQLENICRFLTVMASGQEILIEDLPNELVEKSTSLKNDSNAW
QDVLSTWMDQELAQGKDAILDYAQIEFEKIMLERALIFTQGHKQDAAKKL
GWGRNTLTRKLKEFDK
>CPS_4597 ompR, transcriptional regulatory protein OmpR
MTQETPKILVVDDDMRLRSLLERYLVEQGFTVRSAANSEQMDRLLERENF
HLLVLDLMLPGEDGLSICRRLRQNSNNIPIVMLTAKGDEVDRIIGLELGA
DDYMPKPFNPRELLARIKAVLRRRTQEAPGAPALEENVISFGGYHLNLAT
REMQKDDISMPLTSGEFAVLKALVTHPREPLSRDKLMNLARGRDYSALER
SIDVQVSRLRRMLEEDPAKPRYLQTVWGLGYVFVPDGSPA
>CPS_1208 phoB, phosphate regulon response regulator PhoB
MSRKILVVEDETPIREMISFVLDQNGFNAIEACDIEQALAKIHEPYPDLI
LLDWMLPGGTGVSLAKKLKQNEYTRNIPIIMLTARSDEDDKVKGFEAGVD
DFVTKPFSPKELIARIKAVIRRVSPTSLEEEVDFHGLKLDPVAHRVAING
NSLDLGPTEFRLLHFFMTHTERVYSREQLLDNVWGTNIYVEDRTVDVHIR
RLRKAISGEGHEDFVQTVRGAGYRFSSKLKKVS
>CPS_1388 phoP, transcriptional regulatory protein PhoP
MRLLLVEDDQALQQELQKQLLLQNYSVDVASDGEIALFQGLEYDYDIAVI
DLGLPKIDGTTVVKALREKGRNFPILILTARDRWQDKVSGLDAGADDYLT
KPFHVEELTSRLNALIRRSAGKASTMINNGPYSLDIATSQVLVEQVSVSL
SAHEFKVFKYLMLHVGEVISKTTLTEHIYDQDFDLDSNVIEVFIRRLRKK
LDPDSKYNFIETKRGQGYRLLKFT
>CPS_1389 phoQ, sensor protein PhoQ
MLTFIKPFFNVFLNSLKLRLMVSLLAMVVIILPTIAFIIMNSFEKHMVRS
IENELSAYSYSILAVAEVEQANLVMPEALIENQFNVSDSGLYAFISGPVK
YESKVTSDVKLENAILWSSQSLLTIKIPDEQLSGEIATLATGDKTFSSFE
INGFPHFIYSYAVSFTEGSDNFPITVHIIRDKQVFSQLIRDFKQQLWFGL
AILMVIILLLQLVWLMWTLKPLSTLEQEVKAVEQGRAEKLTSLYPKELSQ
LTTQLNQLLATEQKQRQRYRNALSDLAHSLKTPLAVMQAQRGISAVNQEQ
INRINSTIDHQLKRAQSAGHSSWLLGIEVKPVVDKLLNTLAKIYQGDHKE
LTLNFTGNITFKGDEADLLELLGNLLDNAYKAAKSTIILTISQQDDALIM
CIEDDGVGIKEQQITQILERGVRADTYEVGHGVGLAIVRDLVASYQGELH
IGNSTELGGAQFTLSFTNKT
>CPS_1209 phoR, phosphate regulon sensor protein PhoR
MHFRLSFISIIYRLLGILLASAFVGWLFDYVLLVMLATSIFLLVWHYHHL
FKLINWIWQSKALSPPQAKGVWGYLYDGLYRQVKQQRNKQKQLNEKIRRF
RDGAEALPDAALMLSEELTIEWGNKKAQRLLGVRWPDDFGQRIDNLLRAP
EFSDYLAHENFEYPCLLVSPIHSDVQLEIRLMAYGSEHVLLLARDISNLQ
RLEDMRRDFVANVSHELKTPLTVVRGYVEMIQASPEAFDPHWQKAFQTIE
GQVSRMDRLVEQLLNLAKVENNSDDEKQCVNMAQLIRTLVDEVTWLNQEK
QHQIMLDISTDVSVLGFETELKSACANLLSNAIAYTPPKGCIEVSWRLMG
NKAIFSVKDNGDGIKPEHVNRLTERFYRIDRSRSRDTGGSGLGLAIVKHV
LHHHQAELIINSHWGQGSEFSIYFDPSTLSNPSR
>CPS_2811 proQ, ProP effector
METEIKRTSTKDIIAYLTEKFPECFSIKGPVKPLKIGIFQDLAEKLDDDE
TVSKTRLRQALRHYTSSWRYLKVIKVGNSRVDVDGKDVAEIDEDQAAYAS
KTLKESQEKFGNKKATDNDAKKPYKGKQGSTEAANNKPADKKRESTKFKT
VKSTPKKTVKKEVEPLKSVESTTINVGSKVRVQLGNSPMKATITEISGKD
ISVQLDSGMVIKTQLQNIYL
>CPS_3772 pspA1, phage shock protein A
MGIFSRFTDIINSNINNLLDKAEDPAKMVRLIIQEMEDTLVEVRSSSAKT
LADKKELARQVSRLEQDAEQWQAKAELALSKDREDLARAALMEKKKSSES
AQALVDELAHTNEHLSKLQGEISQLQDKLSDAKVRQKAIVIREKSASSRL
KVKENIHSTRVNDALSRFDHYERKVDDIEAEIESYDLGSKSLADEIAGLE
SDEMVDDELAQLKAKMKNKQK
>CPS_4751 pspA2, phage shock protein A
MGLFSRFTDIVNANLNSMLDKAEHPEKMIRMIIGEMEETLVEVRSTAAKN
IAEQKTLARKVKTTQEGVAHWHDKAEIALNKGREDLAKSALAQKHKCQAE
LTQLNEENVQLTDLLSAIQEDAQRLQDKLSEAKRRQDALRLRQESAEVRL
KVREKAVIHNIDEAMAKFERYQQKIDHLEAQVESYDLTENKDLSTQISDL
EQDDNIEAELAEMKKKVVNG
>CPS_3770 pspC, phage shock protein C
MNRKRGELYRNAEQGKIAGVCAGIADYFGWETWLVRILVVSGVLFGMPFL
ILGYVAAWFILDKAPEKATNANHEPGESQYAKRHQQGKKNVDVSNESIKV
KARIWQAGEPPKQALYDIRRKFRLLEGKVQAMEQYVTSAEYTVSREINKL
>CPS_3774 pspF, sigma-54 depedent transcriptional activator PspF
MASFNQQDNLLGQSNSFLEVLEQISQVATLSKPVLIIGERGTGKELVAAR
LHFLSKRWEQSYLKLNCAALNENLLETELFGYDSGAFTGASKRHEGRFER
ADKGTLFLDEIANTSGLIQEKLLRVVEYGEFERVGGSRTINSDVRLVAAT
NEDLPTLAASGQFRADLLDRLAFDVITLPPLRERLDDIIMLAEHFAMNMA
RELEFELFSGFTEKAKRSLLEYHWPGNIRELKNVVERSVYRCNNPHLPVH
ELIIDPFESPFRPNQRIKTHDRVNELNKNNISTSDNVVDDSVTVKPSAVD
TAKVAPKVVTQQFPQSLKTLSQEYEIELIQTALAHCQFNQKKTAEALELT
YHQLRGYLKKYNLLDGSITDEL
>CPS_4545 ptsN, PTS system, nitrogen regulatory IIA component
MQLSEILTTSCTSCDVAVTSKKRILERICQLAAIQITDIEQDELLDSLLN
REKMGSTGIGNGIAIPHGRLPNTSKAVAVLITTEKAIDFDAIDNRDVDIF
VALFVPENSCQEHLDTLQNIAKLFSDKKMIKQVRKCNDNQALYNLIQQAS
>CPS_3624 ptsP, phosphoenolpyruvate-protein phosphotransferase PtsP
MLTTLRRIVLEFSQEAELQNALERMVYNVKKAMKTDCCSIYLADYHQQHF
LLMASDGLAKTSVGETSIGFSEGLVGLVGQREEPLNIADAQQHQDYMHAP
EVEEDDFNAFLGTPIIHQRKVLGILAIQQKESRHYTENDEAFLVTLSAQL
ASALANAEVKNLLSHQQQKNQGVKQLHGIAGAPGIALSEIIVCQPQADLA
AVSLKKSPDSQKQLLRFEQAVEKTRIEFDVLSSQLSEAIDDDSLAIFDVY
KQLLEQASLGHEVAAKISKGWRADSALKLVIEHYISQFEAIEDSYFRERA
SDIRDLGTRLLVNIQQQAKEELELPKEFILLAQDVSASLVAQYQHQGLLG
IISLTGSNNSHAAILARSLGLPAIMGVNALVLGQLHQQQAIIDGYSGELF
INPDEGLIREYQYLLSQEKALTDKVMEVAQLPCITQDGRAIEVLLNAGLS
AGFEHSAKLGALGIGLYRTEIPFMNRNCFPSEQEQTQLYRKVLQVFPKHG
VTMRTLDVGGDKSLPYFPINEENPFLGWRGIRITLDHPEIFLVQVRAMLR
ANQGLNNLEIMLPMISGVEEIDEANRLINQAFFELKAELTKDITTELMSA
RNEDGHLTLQQAQQKAQAVSAKLVRPKIGIMLEVPSVIFQMEALAKRVDF
FSVGSNDLTQYLLAVDRNNSQVANLYDAFHPAVLNALNSIAQQSAKYLTP
ISLCGELASQPAGAILLLAMGFDKISMNGHNVPRIKWVIRHISFEQAQNI
LNKTLTLTTAKEVHSYLNEQLEVLGLGGFIRAGF
>CPS_4115 relA, GTP pyrophosphokinase
MVSVRKSHQITEQSFEHWLTDLALTDIKKNALSALWLQVSNCYQPESAEK
QQLLHKSMEMVEILSGLNLDADSLVAAFISPLLANDIIEIEFVKEHFSKD
ILMLCQGVEQMAAIKALRQQSSQSSDQAPQNIDNIRRMLLAMVDDVRAVV
IKLAERLCDLREKKNSDEETRVLVAKESANIYAPLANRLGIGQLKWELED
ISFRYLHPQVYKKIAKLLDETRLEREQYMASFVGHLNSELNALAIKGEVY
GRPKHIFSIWKKMQQKSLDFDQLFDVRAVRVVVEKVQDCYSALGIVHTEW
QHIAKEFSDYVATPKANGYQSIHTVVLGPEGKSVEVQIRTKQMDDDAELG
VAAHWRYKEGNASGKSNSFDDKVGWLRKILQWQDDVAESGELLDELRSQV
FEDRIYVFTPSGDVIDLPMGSTPLDFAYYIHSNVGHTCIGAKVFGKIVPF
THRLQTGDQIEILTSKQPNPSRDWLNPNLNYIHSSRARAKVQHFFKLLDR
DKYIALGKELFDNEIAKHDLASTDLLAAAKRFNMKTVDDLYAAIGSGNAR
LQQVINHFTQLDSKLKPKPEIDPQSLVKQTTTSKALAQDDNGITVSGVGN
LLTHMAKCCQPVPGDTISGFITQGRGISVHRQDCEQLANALTLQPERLVE
VQWGSENKISYQATAQIIGSDRQGLLRDISTIIANERVSIVGMDSHTDKV
KQTMSMNLKLEVESSELLTRVLDKLRQLDDVTQVRRL
>CPS_4128 rseA, sigma-E factor negative regulatory protein RseA
MSEIKTESISSLVDNYSPSTDDSISAHLVDNMLKDEHLSSTWQNYHLIGD
VLRDEVPQSLQLDLSETISAAIAQEATILSPNSSMKTSGKNSHLATDENV
SINNHSAAQQTNSVVDATNRFKAKISSLIKPMGQVAIAASAAALMIVGVQ
NNVTDNSIVTPSQVVQTVPLSGYANPVSFNVQSSQTQQSQQSKQQTQQAM
NEQLASDRIAQQRRLQALLKDHNQQVKLGSNIK
>CPS_4127 rseB, sigma-E factor regulatory protein RseB
MKLSAFLLLLLSFNVSAITADTESAKFSLERLSNSLRQLNFSTSFVVVKN
NQAEPYHWLHGIGDNEQELEIFTRLNGPRRDVLRQGKIVSYIEPEQEPYS
IISSDVRSPIPSIFRGNISELEESYRFISVGRSRILGRVAQLVRIVSKDK
YRFSYWLWLDQKTGLLLKMAVLTRQGQLLEQIQFTHIEVNEQLTDNLEQF
QLTELPKVVELTQQQNKALSWQVDWLPQGFSVVKSNQHRLNSHNQGNEKA
VEFMLFSDGLVEVSVYVNPSQEKFRAPEYASDGATIVFNHILQGIEVGIV
GNIPLATAKKIAESIAPAVIDNVNNNAQGSKGEQQDD
>CPS_4126 rseC, sigma-E factor regulatory protein RseC
MIKELANVVAIEAGQVTVTSQIKSTCSGCAQVDTCGSGQIAKALPQAKLT
LTLPYDISVTGVPLKEGDCVVLALPEKHILSSAGQVYLLPLLGLITFSAL
GQWLLKQQILPHELFALGLGLIGGYLGYRFAKFQQKQGKQSENLQPKIIE
VLPSPNIVK
>CPS_1426 rstA, transcriptional regulatory protein RstA
MTAQARPHILLVEDDIDLAEWIADYLIGREFKVTTCHRGDDAVDLIQSLN
PDIVLLDGMLPGMDGLDVCKTVRATFDNPIIMITARDEEIDEVLGLEMGA
DDYITKPVRARVLLARIRGLLRREDKSRTADKSNVQQLTDEQLESKGVLK
FSGLVISEQARSVTLDGESIKVSSNEFDVLWFLATKAGQVVSRKELVSHF
RGFDYDGFDRSIDLRISRLRKKLKDDSSEPFRIKTIWGKGYLFANDVW
>CPS_1427 rstB, sensor protein RstB
MRNLTLSLVAVVLIATIGLGWMFDSIYNQYLNQNLDQSTAQSNQETSGQQ
SVIDTLEQVGTHLSIALSGIDNRQEFIQQWPSEGTLSLRLKPLTNFPLPQ
PLLTDLVAGQPLLLETDDSIAMHFYLPATDELLVLTTPPVTVHQNNSFLP
ILLTSLFYLAVLLLMLLWLYPLMRRLMTLRQTAKSFGEGNLNQRIDVGSI
SYIRDLELEFNRMAQRIDDLVTDIKLLSSAVSHDLRTPLARIRFGIDTIQ
EEDDPVLRKRFEQRISDNVDEMVDLVESLLSYARLDQTLITIHKAPVDFS
ALTATCIKNKSQDDVQLTFEAPKQAVFVDGDLSYLMILMSNLLQNAHQYC
KGKIAVKIIAQDSNIVITVADNGPGIPIDQREKILKPFIRGESTEKKVKG
YGMGLAIVKRIVEWHNGEIIIENSAELQGAQFSVTLPKA
>CPS_3154 sixA, phosphohistidine phosphatase SixA
MQVYIMRHGEAQNFVEQGSRDDSQRALTAQGKIEAKMMATWLQKMKISPM
QVFVSPYIRAQQTCAIATALMQAAITTLDFITPAGDAKQVHDFIDGWCSE
QLEATTEQEHSLLIISHMPLVSYLVAELTQSSNAPIFATAGIAHIDYDTE
KMQGVLQRLVSPIELC
>CPS_4973 spoT, guanosine-3,5-bis(diphosphate)3-pyrophosphohydro lase
MYLFEPLKELSSTYLSKVQIDLLKHAYVVARDAHDGQMRSSGDPYITHPV
AVAINLAQMNLDHETLMAALLHDVIEDTEVTKDELAELFGHTVAELVEGV
SKLDKLKFNNKEEMQAENFRKMVLAMVQDIRVILIKLADRTHNMRTLGSL
RPDKRRRIARETLEIYAPIANRLGIHDIKNELELLGFEALYPMRSRALKS
AVQSARGNRKAIIDNIEKEIAARLAESGIDAQIIGREKHLYSIYRKMLNK
ELMFNEVMDIYAFRVIVHDKIDNCYRALGAMHNLFKPIETRFKDYIAIPK
TNGYQSLHTSLIGPHGIPVEIQIRTHDMDQMADKGVAAHWLYKQDGDNTG
TTAQMKARRWMQSLLELQQSAGSSFEFIENVKSDLFPEEIYVFTPDGRII
ELPMGATAIDFAYAVHTDVGNSCVGVKVDRKPYPMSRPIDSGQTIEVITS
ASARPNATWLNFVVTAKARLQIRTYLRSCEKNESHALGLRLLSHALGKTK
LVDLAQEKIDEVVQQSGNSTFEELLTNIGLGNALSIGIARQLTDGFTEDN
ELTSTTSPKTKMPIKGTEGMLVSYGKCCRPIPGDAILAYLSPGKGLMVHQ
QGCRNIKGHDQGSLFPVKWDSDIDKEFIAKLRVEIINHQGALALLTNAVA
KCGSNVHNLNSGEKEAGLYVIDMEITCRDRIHLADIIRKIKVMIDVQRVI
RNK
>CPS_1828 torR, DNA-binding response regulator TorR
MNDKHILVVEDEAITRAKLVGYFQHAGYRVSEAENKSQMMVVLENHHIDL
VMLDINLPDEDGLMITRNLRSHSNIGIVLVTGRTDSIDKIIGLEMGADDY
VTKPFELRELLVRVKNILWRISLTEQKSVIATEDEEDDDLFHFGQCSFDI
PKRKLLKNNIPIKLTKAEYDILVAFVANPSRVLSRDRLLNLIEHRVDAPN
DRTIDVLVRRLRHKIEDNPKEPQIFTTIHGEGYLFAADIT
>CPS_1826 torS, sensor protein TorS
MHFRRSIGNKLLFAFSFVAGLLLFVSIVAWNGLSLIASTGDIITQQTLPT
LSSARELANLSLQITHKTTLLKNVTDEEQRQEISQTLTLLHLAVEDKFIA
LELLNLNKKNLPSLISLKKDINQGIEQLDLYAKNKITNQQQRDQAFTVVK
ASVHEISVLSQSQVANASTFALVRLSGLYDLIEQKSNLLQAKQDIDLIID
EDLNLLDKMAALERNALELEQIANLVITTQQYQPLNELTHNKNRLVLLIS
NLVDSITDPYRANLANIALIKLNLFDNLLDNQQRAIELDQKQSLLHQHIS
NQLTQLNQGILSLVEKQGELAKKTSQQHQKLVSWSQNVFLITTLLSLIVI
VFVMWKVVYQGIVFKLQKHTDAIERLAAGDLEITVESSNDEELKHLAEAL
DVFREHAIKKQQLEYEQLQTEQELRLHKENLEQLINIRTQELRFTNEKLN
SESKAHALAKQQADEANRAKSVFLASMSHEIRTPMNGMIGTLELLTDTKL
TSEQQKYAQTILYSGESLLDILNDILDYSKIEAGHIALSYRAIDLGKLGE
DVVHLMRARAQNKSLQLHFEKKGNIENWRVADLGKLRQILINLINNAIKF
TQRGSIVLSIGVNDESSSGDSEVTFSVTDTGCGIAKDKQADVFQAFTQVD
NLQSAVGTGLGLAICQRLVSAMQGTLSLESEENRGSCFAFTIPLARASAE
AISAQQVLFLPPQALSQYYQVLIVEDNEINLDVACALVEKLGHKVTAAKD
GASALKCMHNNRFDLALLDINLPDIDGVTLSQQLKVIAKEKQTPFKTIAV
SAHVFNEDIAKFIKSGFDGFVAKPVQMKKLKPSIAKVMFNVRGFVNQEVE
GGAEQETEPCLELKVEMPEAVVIASTNKDSLVESQELSEFLLFDADIPNQ
DIEYLGSDKVIQLTRLFCQQIDNEYSNFSSLSAIDQHAKLHKLKGAAIGL
GLVRLYQLCHTLEINTEDNKLTSSQLLMIKDLAQLSKQSLNQYAQSLKNI
>CPS_0606 typA, GTP-binding protein TypA
MLDKLRNVAIIAHVDHGKTTLVDKLLEQSGTLDTRGGLEERTMDSNDIEK
ERGITILAKNTAVNWNGYRVNIVDTPGHADFGGEVERVMSMVDSVLLIVD
AQEGPMPQTRFVTKKAFAQGLKPILVINKVDKPGSRPDWVMDQVFELFDN
LGATDEQLDFKVVYASAINGWASLEEGVTGTDMTPLFDTIIKEVPQPIAD
PEGAFQMQISQLDYNSYLGVIGVGRITRGSVKPNQQVTIQLANGGVHNAK
VGKVFGYLGLERLDIAEGFAGDIIAITGLGELKISDTVCCPTEVEGLPAL
SVDEPTINMTFQVNTSPFCGKEGKYVTSRNIKDRLDKELIHNVALRVEQL
EDADKFKVSGRGELHLGILIENMRREGFELAVSRPEVIIREIDGQLQEPY
ETVTIDVEEQHQGPIMEKMGVRKAELTDMAPDGTGRIRMDFIMPSRGLIG
FQTEFMTLTSGSGLIYHTFFEYGPHKGGEIGQRKNGVMIGNATGKALTNA
IFNLQSRGRMLIGHGVDIYEGQVIGIHSRDNDLTVNALKGKQLTNVRSSG
TDEAQTLTPPIVMSLEQALEFIDNDELVEVTPESIRIRKKFLKENDRKRE
GRGVK
>CPS_1635 umuD1, umuD protein
MKVIPVYIEAGISGFESPAAEYRELNLSLEELLLQHPNATFFGLANGRSM
EGRGIFNGDVLVVDRVEHISNGSVIVANFNGCFVCKIIDTDNALLLSASD
EHKPIKISESDDFQIEGVVNVSFRLHKKLPVLLSCLG
>CPS_2683 umuD2, umuD protein
MKVIPIYAEAGISGFESPAAEYKELGLSLDQLIIKHPNATFIGQASGQSM
KGVGIFDGDILIVDRSLTARNGDVIVANYNGCFVCKLIDKVQARLLSASA
DFAPVSITPEDEFSLEGVVTRSIRLHHKSPELAACML