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COG category: Signal transduction mechanisms
Organism: Silicibacter pomeroyi DSS-3, DSS-3

Number of genes found: 145

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Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SPO1616 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1712041 891 - 0.634119
NA SPO0572 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS581384 1716 + 0.663753
NA SPO3852 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4067659 1359 - 0.682855
NA SPO2364 amino acid ABC transporter, periplasmic amino acid-binding proteinSubName: Full=Amino acid ABC transporter, periplasmic amino acid-binding protein; chromosome CDS2507889 1014 + 0.655819
NA SPOA0395 hypothetical protein megaplasmid CDS443538 1293 + 0.629544
NA SPO1411 C4-type zinc finger protein, DksA/TraR familySubName: Full=C4-type zinc finger protein, DksA/TraR family; chromosome CDS1482007 270 + 0.677778
NA SPO2629 C4-dicarboxylate transport transcriptional regulatory proteinSubName: Full=C4-dicarboxylate transport transcriptional regulatory protein; chromosome CDS2782760 1230 - 0.682114
NA SPO3040 polar amino acid uptake family ABC transporter, periplasmic substrate-binding proteinSubName: Full=Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein; chromosome CDS3252210 834 + 0.586331
NA SPO3298 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS3498963 708 + 0.672316
NA SPO1346 transcriptional regulator, LuxR family/sensory box proteinSubName: Full=Transcriptional regulator, LuxR family/sensory box protein; chromosome CDS1407319 615 + 0.643902
NA SPO0132 sensor histidine kinase/response regulatorSubName: Full=Sensor histidine kinase/response regulator; EC=2.7.3.-; chromosome CDS138223 2220 - 0.61982
NA SPOA0358 sensor histidine kinaseSubName: Full=Sensor histidine kinase; EC=2.7.3.-; megaplasmid CDS400107 1371 + 0.671043
NA SPO1059 serine/threonine protein kinaseSubName: Full=Serine/threonine protein kinase; EC=2.7.1.-; chromosome CDS1110768 2112 + 0.620739
NA SPO0615 conserved domain proteinSubName: Full=Uncharacterized protein; chromosome CDS633778 1134 + 0.656967
NA SPO0744 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS774970 1722 - 0.62137
NA SPO3034 phosphoenolpyruvate-protein phosphotransferaseSubName: Full=Phosphoenolpyruvate-protein phosphotransferase; EC=2.7.3.9; chromosome CDS3241134 2244 - 0.648841
NA SPO2036 sensory box sensor histidine kianse/response regulatorSubName: Full=Sensory box sensor histidine kianse/response regulator; EC=2.7.3.-; chromosome CDS2163585 2307 - 0.648028
NA SPO3297 sensory box histidine kinase/response regulatorSubName: Full=Sensory box histidine kinase/response regulator; chromosome CDS3497068 1899 + 0.656135
NA SPOA0357 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; megaplasmid CDS399373 729 + 0.640604
NA SPO1566 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS1656751 615 - 0.647154
NA SPO3462 flagellar hook-length control proteinSubName: Full=Flagellar hook-length control protein; chromosome CDS3664298 2478 + 0.640839
NA SPO0188 sensor histidine kinaseSubName: Full=Sensor histidine kinase; EC=2.7.3.-; chromosome CDS204870 1386 + 0.637085
NA SPO3223 response regulatorSubName: Full=Response regulator; chromosome CDS3428169 363 - 0.586777
NA SPO2248 dnaK suppressor protein, putativeSubName: Full=DnaK suppressor protein, putative; chromosome CDS2392851 360 + 0.666667
NA SPO3410 anti-sigma B factor, putativeSubName: Full=Anti-sigma B factor, putative; chromosome CDS3611441 450 + 0.628889
NA SPO2753 diguanylate cyclase, putative/response regulatorSubName: Full=Diguanylate cyclase, putative/response regulator; chromosome CDS2945206 1389 + 0.686105
NA SPO0021 Hpt domain proteinSubName: Full=Hpt domain protein; chromosome CDS20571 354 - 0.590395
NA SPO3455 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS3658917 1578 + 0.629278
NA SPO1306 His/Glu/Gln/Arg/opine family ABC transporter, periplasmic His/Glu/Gln/Arg/opine family-binding proteinSubName: Full=His/Glu/Gln/Arg/opine family ABC transporter, periplasmic His/Glu/Gln/Arg/opine family-binding protein; chromosome CDS1370957 813 - 0.617466
NA SPO0022 response regulatorSubName: Full=Response regulator; chromosome CDS21005 1338 + 0.602392
NA SPO3868 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4081068 1503 + 0.631404
NA SPO2667 polar amino acid uptake family ABC transporter, periplasmic substrate-binding proteinSubName: Full=Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein; chromosome CDS2821816 834 - 0.623501
NA SPO2511 dnaK suppressor protein, putativeRecName: Full=RNA polymerase-binding transcription factor DksA; chromosome CDS2658830 477 - 0.614256
NA SPO3548 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3758598 498 - 0.682731
NA SPO1064 serine/threonine protein phosphatase, putativeSubName: Full=Serine/threonine protein phosphatase, putative; chromosome CDS1117879 957 + 0.61024
NA SPO2185 universal stress protein family proteinSubName: Full=Universal stress protein family protein; chromosome CDS2321564 438 - 0.664384
NA SPO1615 cyclic nucleotide-binding proteinSubName: Full=Cyclic nucleotide-binding protein; chromosome CDS1711334 675 + 0.648889
NA SPO0187 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS204208 666 + 0.569069
NA SPO2977 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS3174604 990 + 0.642424
NA SPOA0102 transcriptional regulator, LuxR familySubName: Full=Transcriptional regulator, LuxR family; megaplasmid CDS102382 969 - 0.616099
NA SPOA0200 conserved hypothetical proteinSubName: Full=Uncharacterized protein; megaplasmid CDS211718 1008 - 0.603175
NA SPO1891 C4-dicarboxylate transport sensor protein DctB, putativeSubName: Full=C4-dicarboxylate transport sensor protein DctB, putative; chromosome CDS2014148 1770 + 0.655932
NA SPO2287 autoinducer synthesis proteinRecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; chromosome CDS2424015 861 + 0.600465
NA SPO0463 universal stress family proteinRecName: Full=Universal stress protein; chromosome CDS472365 408 + 0.625
NA SPO0327 EAL domain proteinSubName: Full=EAL domain protein; chromosome CDS338082 840 - 0.617857
NA SPO0533 diguanylate cyclase, putativeSubName: Full=Diguanylate cyclase, putative; chromosome CDS528927 1542 - 0.642023
NA SPO0201 conserved domain proteinSubName: Full=Uncharacterized protein; chromosome CDS218871 420 + 0.638095
NA SPO0372 autoinducer synthesis proteinRecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; chromosome CDS386685 639 + 0.607199
NA SPO0931 response regulatorSubName: Full=Response regulator; chromosome CDS986495 720 - 0.679167
NA SPO1173 diguanylate cyclase, putativeSubName: Full=Diguanylate cyclase, putative; chromosome CDS1223161 1797 - 0.637173
NA SPO3458 flagellar protein FlaF, putativeSubName: Full=Flagellar protein FlaF, putative; chromosome CDS3661703 378 - 0.648148
NA SPO3039 polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein, putativeSubName: Full=Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein, putative; chromosome CDS3251298 744 - 0.568548
NA SPO2173 sensor histidine kinaseSubName: Full=Sensor histidine kinase; EC=2.7.3.-; chromosome CDS2308313 1326 - 0.661388
NA SPO3409 anti-anti-sigma factorRecName: Full=Anti-sigma factor antagonist; chromosome CDS3611080 339 + 0.59587
NA SPO1507 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS1582986 705 - 0.649645
NA SPO1063 conserved domain proteinSubName: Full=Uncharacterized protein; chromosome CDS1117059 837 + 0.667861
NA SPOA0069 polar amino acid uptake family ABC transporter, periplasmic substrate-binding proteinSubName: Full=Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein; megaplasmid CDS68410 771 + 0.635538
NA SPO2362 amino acid ABC transporter, periplasmic amino acid-binding proteinSubName: Full=Amino acid ABC transporter, periplasmic amino acid-binding protein; chromosome CDS2505668 1002 - 0.649701
NA SPO0929 type II DNA modification methyltransferase, putativeSubName: Full=Type II DNA modification methyltransferase, putative; chromosome CDS985559 633 - 0.631912
NA SPO2574 sensor histidine kinaseSubName: Full=Sensor histidine kinase; EC=2.7.3.-; chromosome CDS2726110 1605 + 0.650467
NA SPO2721 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2903106 597 + 0.656616
NA SPO1505 sensor histidine kinase/response regulatorSubName: Full=Sensor histidine kinase/response regulator; EC=2.7.3.-; chromosome CDS1579566 2214 - 0.665312
NA SPO1775 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1891953 720 + 0.652778
NA SPO1869 BolA family proteinSubName: Full=BolA family protein; chromosome CDS1988361 237 - 0.620253
NA SPO1764 transcriptional regulator, LuxR familySubName: Full=Transcriptional regulator, LuxR family; chromosome CDS1883585 777 - 0.638353
NA SPOA0206 transcriptional regulator, Crp/Fnr familySubName: Full=Transcriptional regulator, Crp/Fnr family; megaplasmid CDS224583 702 + 0.675214
NA SPO0492 cyclic nucleotide-binding domain proteinSubName: Full=Cyclic nucleotide-binding domain protein; chromosome CDS495649 843 + 0.667853
NA SPO1042 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1089858 669 + 0.560538
NA SPO0094 sensory box sensor histidine kinase/response regulatorSubName: Full=Sensory box sensor histidine kinase/response regulator; EC=2.7.3.-; chromosome CDS93264 2232 + 0.624104
NA SPO2630 C4-dicarboxylate transport sensor proteinSubName: Full=C4-dicarboxylate transport sensor protein; EC=2.7.3.-; chromosome CDS2783986 1737 - 0.680484
NA SPO3456 flagellar protein, putativeSubName: Full=Flagellar protein, putative; chromosome CDS3660508 798 - 0.597744
NA SPO3527 universal stress protein family protein chromosome CDS3735771 843 + 0.661922
NA SPO1516 amino acid ABC transporter, periplasmic substrate-binding protein, putativeSubName: Full=Amino acid ABC transporter, periplasmic substrate-binding protein, putative; chromosome CDS1591450 915 + 0.66776
NA SPO2369 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS2513756 663 + 0.607843
NA SPO1809 nucleotidyltransferase/CBS/cyclic nucleotide-binding domain proteinSubName: Full=Nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein; chromosome CDS1925559 1824 - 0.662829
NA SPO1947 phosphate regulon sensor histidine kinase, putativeSubName: Full=Phosphate regulon sensor histidine kinase, putative; chromosome CDS2075688 1047 + 0.679083
NA SPO0161 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS178533 615 - 0.62439
NA SPO0979 low molecular weight phosphotyrosine protein phosphataseSubName: Full=Low molecular weight phosphotyrosine protein phosphatase; EC=3.1.3.48; chromosome CDS1031074 462 + 0.660173
NA SPO3038 sensor histidine kinase/response regulatorSubName: Full=Sensor histidine kinase/response regulator; EC=2.7.3.-; chromosome CDS3248605 2697 - 0.599926
NA SPO0597 universal stress family proteinRecName: Full=Universal stress protein; chromosome CDS616052 405 + 0.693827
NA SPO2575 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS2727711 651 + 0.643625
NA SPO3650 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS3852371 1773 + 0.657642
NA SPO3203 guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative chromosome CDS3413869 2193 - 0.633835
NA SPO1012 transcriptional regulator, LuxR familySubName: Full=Transcriptional regulator, LuxR family; chromosome CDS1061835 537 - 0.642458
NA SPO2978 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS3175590 960 + 0.651042
NA SPO3426 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS3629493 687 - 0.611354
NA SPO1623 sensor histidine kinaseSubName: Full=Sensor histidine kinase; EC=2.7.3.-; chromosome CDS1719919 1371 - 0.707513
NA SPOA0327 rzcC protein, putativeSubName: Full=RzcC protein, putative; megaplasmid CDS367716 567 + 0.643739
NA SPO3450 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS3653459 1377 - 0.630356
NA SPO1624 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS1721282 681 - 0.647577
NA SPO1479 transcriptional activator, putativeSubName: Full=Transcriptional activator, putative; chromosome CDS1552761 636 + 0.622642
NA SPO3405 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3608184 453 - 0.635762
NA SPO0386 universal stress family proteinSubName: Full=Universal stress family protein; chromosome CDS399394 471 - 0.617834
NA SPO3024 adenylate/guanylate cyclase/hydrolase, alpha/beta fold familySubName: Full=Adenylate/guanylate cyclase/hydrolase, alpha/beta fold family; chromosome CDS3228187 1398 + 0.627325
NA SPO0751 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS785123 1173 - 0.628303
NA SPO1061 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS1114443 1101 + 0.578565
NA SPO0163 sensory box histidine kinase/response regulatorSubName: Full=Sensory box histidine kinase/response regulator; chromosome CDS180023 2472 + 0.634709
NA SPO0541 sensor histidine kinaseSubName: Full=Sensor histidine kinase; EC=2.7.3.-; chromosome CDS535901 1386 + 0.6443
NA SPO3877 transcriptional regulator/arsenate reductaseSubName: Full=Transcriptional regulator/arsenate reductase; chromosome CDS4092256 894 + 0.614094
NA SPO3358 serine/threonine protein phosphatase family proteinSubName: Full=Serine/threonine protein phosphatase family protein; chromosome CDS3556744 735 + 0.659864
NA SPO3454 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3657836 702 + 0.626781
NA SPO3335 glutamine ABC transporter, periplasmic glutamine-binding proteinSubName: Full=Glutamine ABC transporter, periplasmic glutamine-binding protein; chromosome CDS3537829 1086 + 0.615101
NA SPOA0391 cyclic nucleotide-binding proteinSubName: Full=Cyclic nucleotide-binding protein; megaplasmid CDS440874 654 + 0.678899
NA SPO2361 sensor histidine kinase/response regulatorSubName: Full=Sensor histidine kinase/response regulator; EC=2.7.3.-; chromosome CDS2503503 2169 - 0.640387
NA SPO2747 diguanylate cyclase, putativeSubName: Full=Diguanylate cyclase, putative; chromosome CDS2938818 1068 - 0.650749
NA SPO1144 universal stress protein family proteinSubName: Full=Universal stress protein family protein; chromosome CDS1199897 438 - 0.655251
NA SPO3100 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3310968 744 - 0.599462
NA SPOA0006 PhoH family proteinSubName: Full=PhoH family protein; megaplasmid CDS5010 1011 + 0.646884
NA SPO0712 Hpr serine kinase/phosphatase domain proteinSubName: Full=Hpr serine kinase/phosphatase domain protein; chromosome CDS743434 519 + 0.643545
NA SPO1023 response regulatorSubName: Full=Response regulator; chromosome CDS1073886 381 + 0.627297
NA SPO2840 GGDEF domain proteinSubName: Full=GGDEF domain protein; chromosome CDS3038169 750 + 0.621333
NA SPO1062 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS1115805 1095 + 0.605479
NA SPOA0323 cyclic nucleotide-binding proteinSubName: Full=Cyclic nucleotide-binding protein; megaplasmid CDS362508 705 + 0.651064
NA SPO2849 BolA protein, truncationSubName: Full=BolA protein, truncation; chromosome CDS3047454 255 - 0.670588
NA SPO0688 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; chromosome CDS717598 1248 + 0.642628
NA SPO0519 glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding proteinSubName: Full=Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; chromosome CDS515315 1143 + 0.629046
NA SPO2371 universal stress protein family proteinSubName: Full=Universal stress protein family protein; chromosome CDS2516319 435 - 0.657471
NA SPO0395 cyclic nucleotide-binding proteinSubName: Full=Cyclic nucleotide-binding protein; chromosome CDS406211 585 - 0.695727
NA SPOA0207 adenylate/guanylate cyclaseSubName: Full=Adenylate/guanylate cyclase; megaplasmid CDS225279 3027 - 0.681533
NA SPO3037 DNA-binding response regulator, LysR familySubName: Full=DNA-binding response regulator, LysR family; chromosome CDS3247808 810 + 0.581481
NA SPO0523 phosphoglycerate mutase family proteinSubName: Full=Phosphoglycerate mutase family protein; chromosome CDS520026 510 - 0.645098
NA SPO1335 transcriptional regulator, Crp/Fnr familySubName: Full=Transcriptional regulator, Crp/Fnr family; chromosome CDS1397382 669 - 0.702541
arsC-2 SPOA0073 arsenate reductaseSubName: Full=Arsenate reductase; EC=1.20.4.1; megaplasmid CDS71286 462 + 0.58658
chvG SPO0711 sensor histidine kinase ChvGSubName: Full=Sensor histidine kinase ChvG; EC=2.7.3.-; chromosome CDS741777 1710 + 0.64152
chvI SPO0710 DNA-binding response regulator ChvISubName: Full=DNA-binding response regulator ChvI; chromosome CDS741039 705 + 0.58156
coxC SPO2400 carbon monoxide dehydrogenase operon C proteinSubName: Full=Carbon monoxide dehydrogenase operon C protein; chromosome CDS2547244 1122 - 0.565954
ctrA SPO1679 DNA-binding response regulator CtrASubName: Full=DNA-binding response regulator CtrA; chromosome CDS1785341 717 + 0.58159
dctB SPOA0236 C4-dicarboxylate transport sensor protein dctBSubName: Full=C4-dicarboxylate transport sensor protein dctB; EC=2.7.3.-; megaplasmid CDS258234 1722 + 0.62079
dctD-1 SPO1892 C4-dicarboxylate transport transcriptional regulatory protein DctDSubName: Full=C4-dicarboxylate transport transcriptional regulatory protein DctD; chromosome CDS2015932 1335 + 0.644195
dctD-2 SPOA0237 C4-dicarboxylate transport transcriptional regulatory protein DctDSubName: Full=C4-dicarboxylate transport transcriptional regulatory protein DctD; megaplasmid CDS259961 1341 + 0.631618
fnrL SPO3531 transcriptional activator protein FnrLSubName: Full=Transcriptional activator protein FnrL; chromosome CDS3739351 744 - 0.622312
glnE SPO2523 glutamate-ammonia ligase adenylyltransferaseSubName: Full=Glutamate-ammonia ligase adenylyltransferase; EC=2.7.7.42; chromosome CDS2668595 2802 - 0.691292
gltI SPO2658 glutamate/aspartate ABC transporter, periplasmic substrate-binding proteinSubName: Full=Glutamate/aspartate ABC transporter, periplasmic substrate-binding protein; chromosome CDS2813357 864 + 0.630787
lexA SPO2154 LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS2289362 696 + 0.639368
ntrB SPO2088 nitrogen regulation protein NtrBSubName: Full=Nitrogen regulation protein NtrB; EC=2.7.3.-; chromosome CDS2226413 1080 - 0.644444
ntrC SPO2087 nitrogen regulation protein NtrCSubName: Full=Nitrogen regulation protein NtrC; chromosome CDS2225040 1374 - 0.657205
ntrX SPO2085 nitrogen assimilation regulatory protein NtrXSubName: Full=Nitrogen assimilation regulatory protein NtrX; chromosome CDS2221246 1413 - 0.645435
ntrY SPO2086 nitrogen regulation protein ntrYSubName: Full=Nitrogen regulation protein ntrY; EC=2.7.3.-; chromosome CDS2222655 2286 - 0.644794
petR SPO0251 DNA-binding response regulator PetRSubName: Full=DNA-binding response regulator PetR; chromosome CDS271676 702 - 0.646724
phoB SPO1953 phosphate regulon transcriptional regulatory protein PhoBSubName: Full=Phosphate regulon transcriptional regulatory protein PhoB; chromosome CDS2082449 690 + 0.647826
ptsN SPO0077 PTS IIA-like nitrogen-regulatory protein PtsNSubName: Full=PTS IIA-like nitrogen-regulatory protein PtsN; chromosome CDS77195 465 - 0.643011
regA SPO3865 photosynthetic apparatus regulatory protein RegASubName: Full=Photosynthetic apparatus regulatory protein RegA; chromosome CDS4078254 555 - 0.652252
regB SPO3867 sensor histidine kinase RegBSubName: Full=Sensor histidine kinase RegB; EC=2.7.3.-; chromosome CDS4079603 1398 + 0.626609
rtcR SPO0156 transcriptional regulator RtcRSubName: Full=Transcriptional regulator RtcR; chromosome CDS172724 1572 - 0.633588
typA SPO2031 GTP-binding protein TypASubName: Full=GTP-binding protein TypA; chromosome CDS2156688 1821 + 0.655684