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2024-05-05 13:24:49

Gene list

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COG category: Signal transduction mechanisms
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953

Number of genes found: 141

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB2718 putative two-component system sensor kinasechromosome CDS3211421 1350 - 0.485185
NA YPTB1819 hypothetical phage proteinchromosome CDS2165504 2136 + 0.492041
NA pYV0001 ypkA; putative targeted effector protein kinasepYV CDS12 2199 - 0.482947
NA YPTB0789 probable ABC transporter, perplasmic amino acid binding proteinchromosome CDS946341 771 - 0.429313
NA YPTB0592 putative exported proteinchromosome CDS697707 1278 - 0.491393
NA YPTB1587 conserved hypothetical proteinchromosome CDS1916227 210 - 0.519048
NA YPTB1259 putative two-component sensor protein like yojNchromosome CDS1504192 2694 - 0.416852
NA YPTB1709 putative chemotactic transducer-related proteinchromosome CDS2061286 2955 - 0.430795
NA YPTB1268 putative cI prophage repressor proteinchromosome CDS1519217 723 - 0.475795
NA YPTB2378 conserved hypothetical proteinchromosome CDS2804301 498 - 0.451807
NA YPTB1923 putative two-component response regulatorchromosome CDS2260330 633 - 0.402844
NA YPTB1112 conserved hypothetical proteinchromosome CDS1330302 1113 - 0.503145
NA YPTB2874 two-component system response regulatorchromosome CDS3400557 1338 - 0.500747
NA YPTB3788 putative membrane proteinchromosome CDS4502457 1698 + 0.484099
NA YPTB1830 bacteriophage hypothetical proteinchromosome CDS2174583 1392 + 0.469828
NA YPTB0310 putative two-component response regulatorchromosome CDS377235 633 - 0.448657
NA pYV0054 yopD; putative Yop negative regulation/targeting componentpYV CDS36551 921 - 0.431053
NA YPTB1613 conserved hypothetical proteinchromosome CDS1962804 852 - 0.488263
NA YPTB1790 putative prophage repressor proteinchromosome CDS2139968 687 - 0.419214
NA YPTB0866 putative amino acid ABC transporter, periplasmic proteinchromosome CDS1042011 789 + 0.501901
NA YPTB0311 two-component sensor/regulatorchromosome CDS377880 2820 - 0.466312
NA YPTB2605 conserved hypothetical proteinchromosome CDS3080585 699 - 0.402003
NA YPTB2223 putative stress proteinchromosome CDS2623902 957 + 0.456635
NA YPTB2080 conserved hypothetical proteinchromosome CDS2450046 1935 - 0.451163
NA YPTB1603 putative GerR-family transcriptional regulatory proteinchromosome CDS1950283 630 - 0.488889
NA YPTB3808 putative hybrid two-component system regulatory proteinchromosome CDS4539546 2556 + 0.54734
NA YPTB0251 conserved hypothetical proteinchromosome CDS296306 861 + 0.469222
NA YPTB1086 putative LuxR-family regulatory proteinschromosome CDS1304328 618 + 0.359223
NA YPTB2912 putative 3',5'-cyclic-nucleotide phosphodiesterasechromosome CDS3442435 1038 - 0.470135
NA YPTB2099 probable response regulatorchromosome CDS2472497 1017 + 0.438545
NA YPTB2729 putative two-component response regulatorchromosome CDS3227010 708 + 0.514124
NA YPTB1204 possible 2-component Histidine kinase-sensorchromosome CDS1434661 1815 + 0.432507
NA YPTB3467 Putative kinase proteinchromosome CDS4127400 1500 + 0.491333
NA YPTB1628 conserved hypothetical proteinchromosome CDS1976356 2082 - 0.480788
NA YPTB2551 putative chemotactic transducerchromosome CDS3018134 1305 - 0.48046
NA YPTB2876 two-component system sensor kinasechromosome CDS3402973 1437 - 0.484342
NA YPTB3819 putative regulatory proteinchromosome CDS4555907 1128 + 0.481383
NA YPTB2719 putative two-component system response regulatorchromosome CDS3212796 684 - 0.475146
NA YPTB1922 possible two-component sensorchromosome CDS2256327 4029 - 0.46761
NA YPTB3308 Conserved putative membrane proteinchromosome CDS3944338 2568 + 0.478972
NA pYV0080 yscD; putative type III secretion proteinpYV CDS56827 1260 + 0.468254
NA YPTB3633 conserved hypothetical proteinchromosome CDS4327251 1317 - 0.513288
NA YPTB3957 ABC transporter, periplasmic amino acid binding proteinchromosome CDS4722836 855 - 0.45614
NA YPTB2728 putative two-component sensor histidine kinasechromosome CDS3225469 1545 + 0.498382
NA YPTB3828 conserved hypothetical proteinchromosome CDS4569628 846 - 0.48818
NA YPTB2600 PTS system, IIA component, possible mannitol permeasechromosome CDS3076791 444 + 0.475225
NA YPTB3801 putative response regulator proteinchromosome CDS4532419 720 + 0.511111
NA YPTB0252 putative carbon starvation proteinchromosome CDS297507 1818 + 0.486799
NA YPTB3410 Conserved hypothetical membrane protein.chromosome CDS4051604 621 + 0.457327
NA YPTB1308 putative membrane proteinchromosome CDS1558613 1581 - 0.42821
NA YPTB2486 putative LuxR-family regulatory proteinchromosome CDS2931506 585 + 0.376068
NA YPTB0840 putative two-component system response regulatorchromosome CDS1007462 717 - 0.447699
NA YPTB1992 putative two-component system sensor proteinchromosome CDS2347848 1392 - 0.515086
aceK YPTB3655 isocitrate dehydrogenase kinase/phosphatasechromosome CDS4360600 1728 - 0.465278
aer YPTB2424 putative methyl-accepting chemotaxis proteinchromosome CDS2866909 1581 + 0.501581
apaH YPTB0631 diadenosine tetraphosphatasechromosome CDS748168 870 - 0.477012
arcA YPTB0601 response regulator (OmpR family), in two-component regulatory system with ArcB (or CpxA), regulates genes in aerobic respirationchromosome CDS708892 717 - 0.481172
arcB YPTB3500 aerobic respiration control sensor/response regulatory proteinchromosome CDS4164182 2337 - 0.483954
artI YPTB1377 ABC transporter, periplasmic arginine-binding protein artIchromosome CDS1639047 732 - 0.460383
artJ YPTB1367 ABC transporter, periplasmic arginine binding protein artJchromosome CDS1628681 732 - 0.443989
baeR YPTB2818 two-component system response regulatorchromosome CDS3333303 720 + 0.531944
baeS YPTB2817 sensor protein baeSchromosome CDS3331908 1386 + 0.515873
barA YPTB0750 bifunctional multimodular BarA: sensory histidine kinase in two component regulatory system, activates OmpRchromosome CDS901933 2829 - 0.470484
basR YPTB0469 two-component system response regulatorchromosome CDS553894 663 - 0.491704
basS YPTB0468 two-component system sensor proteinchromosome CDS552830 1068 - 0.47191
bipA YPTB0025 putative GTPasechromosome CDS34478 1824 + 0.490132
bolA YPTB0956 activator of morphogenic pathway (BolA family), important in general stress responsechromosome CDS1150376 321 + 0.451713
cheA YPTB2405 chemotaxis protein CheAchromosome CDS2839808 2172 - 0.50046
cheB YPTB2398 protein-glutamate methylesterasechromosome CDS2829091 1050 - 0.531429
cheD YPTB2401 methyl-accepting chemotaxis proteinchromosome CDS2832980 1674 - 0.479689
cheD YPTB3051 Putative methyl-accepting chemotaxis protein.chromosome CDS3602717 1644 - 0.456204
cheR YPTB2399 chemotaxis protein methyltransferasechromosome CDS2830140 873 - 0.504009
cheW YPTB2404 chemotaxis protein CheWchromosome CDS2839148 498 - 0.471888
cheY YPTB2397 chemotaxis protein CheYchromosome CDS2828601 390 - 0.458974
cheZ YPTB2396 chemotaxis protein CheZchromosome CDS2827947 645 - 0.488372
copR YPTB1993 transcriptional activatorchromosome CDS2349245 693 - 0.520923
cpxA YPTB0069 two component sensor kinasechromosome CDS79868 1377 - 0.498184
cpxP YPTB0071 putative exported proteinchromosome CDS82113 489 + 0.464213
cpxR YPTB0070 two component system response regulatory proteinchromosome CDS81241 699 - 0.499285
creB YPTB3171 Putative response regulator CreB family.chromosome CDS3729592 699 - 0.496423
creC YPTB3170 Putative histidine kinase sensor, CreC familly.chromosome CDS3728163 1419 - 0.508809
crp YPTB3729 cAMP-regulatory proteinchromosome CDS4422708 633 + 0.472354
csrA YPTB0826 carbon storage regulatorchromosome CDS993520 186 + 0.451613
cstA YPTB2156 putative carbon starvation protein Achromosome CDS2532435 2067 - 0.499758
dksA YPTB0734 dnaK suppressor proteinchromosome CDS880441 456 - 0.497807
envZ YPTB3763 osmolarity sensor proteinchromosome CDS4466115 1353 - 0.515152
fleR YPTB3350 Sigma-54 transcriptional regulatory proteinchromosome CDS3980919 1029 - 0.445092
fliY YPTB1718 putative cystine-binding periplasmic proteinchromosome CDS2072576 801 + 0.483146
fnr YPTB2222 fumarate and nitrate reduction regulatory proteinchromosome CDS2623015 753 + 0.448871
glnE YPTB3408 probable glutamate-ammonia-ligase adenylyltransferase (ATASE)chromosome CDS4046990 2856 - 0.528011
glnH YPTB2548 ABC tranporter, periplasmic glutamine-binding protein glnHchromosome CDS3015753 744 + 0.459677
hisJ YPTB2610 ABC tranporter, periplasmic histidine-binding protein hisJchromosome CDS3084969 783 - 0.440613
hmsT YPTB0570 diguanylate cyclase/phosphodiesterase domain 1chromosome CDS672246 1173 - 0.4237
hydG YPTB1205 transcriptional regulatory protein hydGchromosome CDS1436462 1365 + 0.449817
kdpD YPTB2919 two-component regulatory protein sensor kinase KdpDchromosome CDS3451325 2727 + 0.541988
kdpE YPTB2920 two-component regulatory protein response regulator KdpEchromosome CDS3454592 630 + 0.504762
lexA YPTB0370 LexA repressorchromosome CDS443082 609 + 0.499179
luxS YPTB0830 quorum sensing protein, produces autoinducer-acyl-homoserine lactone-signaling moleculeschromosome CDS997806 516 + 0.476744
narP YPTB2763 nitrate/nitrite response regulator protein NarPchromosome CDS3263782 630 + 0.450794
narX YPTB1957 nitrate/nitrite sensor proteinchromosome CDS2302678 1782 - 0.469136
ntrB YPTB0023 Two component regulatory, involved in nitrogen assimilationchromosome CDS31204 1050 - 0.492381
ntrC YPTB0022 nitrogen regulation proteinchromosome CDS29784 1413 - 0.527247
ompR YPTB3764 transcriptional regulatory proteinchromosome CDS4467464 720 - 0.522222
phoB YPTB0917 response regulator in two-component regulatory system with PhoR (or CreC), regulates Pi uptake (OmpR family)chromosome CDS1106860 690 + 0.485507
phoH YPTB1955 putative phosphate starvation-inducible proteinchromosome CDS2300120 789 + 0.486692
phoP YPTB2434 response regulator proteinchromosome CDS2877189 672 + 0.480655
phoQ YPTB2435 sensor protein kinasechromosome CDS2877866 1455 + 0.463918
phoR YPTB0918 sensory kinase in two-component regulatory system with PhoB, regulates pho regulonchromosome CDS1107574 1317 + 0.485194
proQ YPTB2377 ProP effector homologuechromosome CDS2803492 714 - 0.528011
pspA YPTB2270 phage shock protein Achromosome CDS2679240 666 - 0.48048
pspC YPTB2268 phage shock protein Cchromosome CDS2678492 360 - 0.505556
pspF YPTB2271 psp operon transcriptional activatorchromosome CDS2680150 1029 + 0.51312
ptsN YPTB3528 Nitrogen regulatory IIA protein (enzyme IIA-NTR)chromosome CDS4195336 483 + 0.463768
ptsP YPTB3035 phosphoenolpyruvate-protein phosphotransferasechromosome CDS3582159 2247 - 0.53182
rcsB YPTB1258 capsule synthesis two component response regulator component Bchromosome CDS1503536 654 - 0.397554
rcsC YPTB1257 two component sensor kinase/response regulator protein RcsCchromosome CDS1500595 2874 + 0.438065
relA YPTB0751 (p)ppGpp synthetase I (GTP pyrophosphokinase)chromosome CDS905205 2235 + 0.50783
rseA YPTB2896 sigma E factor negative regulatory proteinchromosome CDS3426866 657 - 0.462709
rseB YPTB2895 sigma E factor regulatory proteinchromosome CDS3425910 957 - 0.478579
rseC YPTB2894 sigma E factor regulatory proteinchromosome CDS3425458 456 - 0.453947
rstA YPTB2230 two-component regulatory system, response regulator proteinchromosome CDS2632008 747 + 0.47925
rstB YPTB2231 two-component regulatory system, sensor kinase proteinchromosome CDS2632754 1305 + 0.467433
sixA YPTB2635 putative phosphohistidine phosphatasechromosome CDS3112873 492 - 0.512195
spoT YPTB0035 guanosine-3',5'-bisbis(diphosphate)3'-pyrophosph ydrolasechromosome CDS47721 2109 - 0.489806
tap YPTB2400 methyl-accepting chemotaxis protein IV (MCP-IV) (dipeptide ch...chromosome CDS2831185 1611 - 0.506518
tar YPTB3924 methyl-accepting chemotaxis protein IIchromosome CDS4683710 1950 - 0.490256
terD YPTB0356 tellurium resistance proteinchromosome CDS421273 579 + 0.481865
terE YPTB0357 tellurium resistance proteinchromosome CDS422035 576 + 0.465278
terX YPTB3463 Putative tellurium resistance proteinchromosome CDS4123197 642 + 0.44081
terZ YPTB0352 tellurium resistance proteinchromosome CDS417885 594 + 0.494949
trg YPTB2412 methyl-accepting chemotaxis protein III (MCP-III) (ribose and...chromosome CDS2851452 1740 + 0.482184
tsr2 YPTB1265 putative methyl-accepting chemotaxis proteinchromosome CDS1515468 1788 - 0.503915
uhpA YPTB3847 two-component system response regulatorchromosome CDS4596657 591 - 0.507614
uhpB YPTB3846 putative sensor protein uhpBchromosome CDS4595131 1530 - 0.489542
uspA YPTB3812 universal stress protein Achromosome CDS4546447 447 + 0.463087
uvrY YPTB1735 response regulator proteinchromosome CDS2093424 657 + 0.455099
ybeJ YPTB1108 ABC transporter, periplasmic glutamate/aspatate binding proteinchromosome CDS1325615 918 - 0.453159
yhdA YPTB3566 putative exported proteinchromosome CDS4244661 1917 - 0.48409
yhjK YPTB3836 putative membrane proteinchromosome CDS4579817 2187 - 0.476909
ypsI YPTB2499 N-acylhomoserine lactone synthase YpeIchromosome CDS2949583 645 + 0.367442
yspI YPTB3258 N-acylhomoserine lactone synthase YspIchromosome CDS3837443 651 + 0.411674