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2024-05-01 07:55:27

Gene list

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COG category: Signal transduction mechanisms
Organism: Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

Number of genes found: 237

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Bd2139 two-component response regulatorchromosome CDS2044543 615 - 0.481301
NA Bd3573 polar amino acid transport system substrate-binding proteinchromosome CDS3474815 798 - 0.477444
NA Bd1762 conserved hypothetical proteinchromosome CDS1697877 1374 + 0.510917
NA Bd0597 ABC-type transporter, periplasmic componentchromosome CDS555972 741 + 0.504723
NA Bd3428 Two-component sensor histidine kinasechromosome CDS3340420 1839 + 0.531267
NA Bd1409 hypothetical protein predicted by Glimmer/Criticachromosome CDS1331212 405 + 0.506173
NA Bd2584 two-component hybrid histidine kinasechromosome CDS2503391 1812 - 0.51766
NA Bd1817 conserved hypothetical proteinchromosome CDS1744707 927 - 0.513484
NA Bd1300 conserved hypothetical proteinchromosome CDS1230739 597 + 0.537688
NA Bd1872 methyl accepting chemotaxis proteinchromosome CDS1797304 669 - 0.569507
NA Bd2843 two-component hybrid sensor and regulatorchromosome CDS2750639 1674 - 0.532855
NA Bd1987 amino acid ABC transporter, periplasmicchromosome CDS1899122 714 + 0.501401
NA Bd2590 transcriptional regulatory proteinchromosome CDS2509775 702 + 0.529915
NA Bd3125 sensor histidine kinasechromosome CDS3028647 1491 - 0.509054
NA Bd2575 putative 2-component transcriptional regulatorchromosome CDS2488688 609 + 0.53202
NA Bd0031 conserved hypothetical protein with FHA domainchromosome CDS28509 690 - 0.518841
NA Bd2422 hypothetical protein predicted by Glimmer/Criticachromosome CDS2328736 663 + 0.535445
NA Bd3465 putative transcriptional regulatorchromosome CDS3374600 762 + 0.524934
NA Bd1429 putative amino acid ABC transporterchromosome CDS1348014 765 + 0.488889
NA Bd0742 GGDEF domain proteinchromosome CDS705077 963 + 0.501558
NA Bd0203 methyl-accepting chemotaxis proteinchromosome CDS189076 1317 - 0.492027
NA Bd1771 putative amino acid transporterchromosome CDS1704177 786 + 0.505089
NA Bd1340 putative methyl accepting chemotaxis proteinchromosome CDS1267526 1596 + 0.535088
NA Bd1571 putative sensor protein fixLchromosome CDS1496676 2568 + 0.534268
NA Bd2591 transcription regulator containing cAMP-binding domainchromosome CDS2510487 645 + 0.483721
NA Bd3649 response regulatorchromosome CDS3541829 429 + 0.526807
NA Bd2855 putative ABC amino acid transporter solute binding proteinchromosome CDS2762320 864 + 0.511574
NA Bd0596 two component sensor histidine kinasechromosome CDS553137 2730 - 0.530037
NA Bd3374 hypothetical proteinchromosome CDS3285936 1428 - 0.494398
NA Bd3208 probable cyclic nucleotide binding proteinchromosome CDS3131806 543 + 0.504604
NA Bd3517 conserved hypothetical proteinchromosome CDS3421331 498 + 0.502008
NA Bd2596 MCP, methyl-accepting chemotaxis proteinchromosome CDS2514987 1449 - 0.550725
NA Bd1535 two-component hybrid sensor and regulatorchromosome CDS1457367 1767 - 0.527448
NA Bd3779 hypothetical proteinchromosome CDS3653097 1350 - 0.514815
NA Bd2761 putative phosphate regulon proteinchromosome CDS2679522 1107 + 0.493225
NA Bd2402 two-component response regulatorchromosome CDS2307664 1929 - 0.491965
NA Bd1899 Sensory transduction histidine kinasechromosome CDS1819883 1131 - 0.538462
NA Bd2142 two-component sensor histidine kinasechromosome CDS2047304 378 + 0.510582
NA Bd3491 conserved hypothetical proteinchromosome CDS3401548 1161 + 0.522825
NA Bd0082 hypothetical protein predicted by Glimmer/Criticachromosome CDS76710 2058 - 0.529155
NA Bd2141 two-component hybrid sensor and regulatorchromosome CDS2046340 948 + 0.489451
NA Bd3451 Conserved Two-component response regulatorchromosome CDS3362077 675 + 0.512593
NA Bd3648 two-component hybrid sensor and regulatorchromosome CDS3540676 1134 + 0.52381
NA Bd3751 hypothetical protein predicted by Glimmer/Criticachromosome CDS3625125 399 + 0.503759
NA Bd1828 Sensory transduction histidine kinasechromosome CDS1752629 2163 + 0.501618
NA Bd1570 GTP pyrophosphokinasechromosome CDS1494446 2217 + 0.518268
NA Bd2041 ABC polar amino acid transport systemchromosome CDS1948997 741 - 0.462888
NA Bd3880 conserved hypothetical proteinchromosome CDS3746044 1374 + 0.532751
NA Bd1891 NtrC family transcriptional regulatorchromosome CDS1813126 1593 + 0.506591
NA Bd1971 hypothetical proteinchromosome CDS1882059 1203 - 0.492934
NA Bd3341 putative methyl-accepting chemotaxis proteinchromosome CDS3253034 1446 + 0.522822
NA Bd2713 hyperpolarization-activated, cyclic nucleotide-gated K+chromosome CDS2636053 393 + 0.498728
NA Bd1773 ABC transporter solute-binding protein-amino acid transportchromosome CDS1704959 798 + 0.528822
NA Bd2154 two-component response regulator homologchromosome CDS2060222 561 - 0.463458
NA Bd2576 TWO-component sensor histidine kinasechromosome CDS2489274 1458 + 0.50823
NA Bd3355 hypothetical proteinchromosome CDS3266057 1974 + 0.507092
NA Bd0621 putative response regulatorchromosome CDS580338 348 + 0.5
NA Bd0489 putative transporterchromosome CDS457275 765 + 0.526797
NA Bd2325 HD-GYP hydrolase domain containing proteinchromosome CDS2225523 999 + 0.475475
NA Bd0771 Tyrosine specific protein phosphatasechromosome CDS728826 750 + 0.504
NA Bd3679 conserved hypothetical proteinchromosome CDS3560845 981 - 0.494393
NA Bd3441 conserved hypothetical proteinchromosome CDS3353153 687 + 0.494905
NA Bd0397 protein phosphatasechromosome CDS374962 765 + 0.495425
NA Bd3315 hypothetical protein predicted by Glimmer/Criticachromosome CDS3231788 444 - 0.490991
NA Bd0374 putative transcriptional regulator PhoB-likechromosome CDS349213 498 + 0.473896
NA Bd1204 Protein-tyrosine phosphatase 2chromosome CDS1143530 882 + 0.513605
NA Bd0805 nitrogen assimilation regulatory proteinchromosome CDS754893 1230 - 0.523577
NA Bd1322 putative sensory proteinchromosome CDS1250101 1362 + 0.494861
NA Bd0619 hypothetical protein predicted by Glimmer/Criticachromosome CDS577701 684 + 0.483918
NA Bd2783 putative amino acid ABC transporter binding proteinchromosome CDS2694865 783 + 0.494253
NA Bd2651 ABC amino acid transporter, periplasmic proteinchromosome CDS2576389 741 + 0.537112
NA Bd1057 ABC transporter, periplasmic domainchromosome CDS1002434 879 - 0.518771
NA Bd2153 putative universal stress proteinchromosome CDS2059254 972 + 0.544239
NA Bd2879 putative regulatory proteinchromosome CDS2792173 1143 + 0.507437
NA Bd0663 chemotaxis proteinchromosome CDS613034 1650 + 0.524242
NA Bd3359 sensory transduction histidine kinasechromosome CDS3273609 1881 + 0.51143
NA Bd2089 amino acid ABC transporter, periplasmic amino acid-bindingchromosome CDS2003518 774 + 0.488372
NA Bd1169 large Ala/Glu-rich proteinchromosome CDS1110232 2385 + 0.515304
NA Bd1873 putative methyl accepting chemotaxis proteinchromosome CDS1797965 1050 - 0.486667
NA Bd0233 two-component response regulatorchromosome CDS219262 756 + 0.46164
NA Bd3261 hypothetical protein predicted by Glimmer/Criticachromosome CDS3178179 546 - 0.479853
NA Bd3650 two-component hybrid sensor and regulatorchromosome CDS3542270 2067 + 0.526367
NA Bd1789 hypothetical protein predicted by Glimmer/Criticachromosome CDS1717214 801 - 0.545568
NA Bd0834 hypothetical abductin-like proteinchromosome CDS784600 2124 + 0.553201
NA Bd1657 Sensory box histidine kinasechromosome CDS1588936 1530 - 0.520915
NA Bd2877 putative ABC-type amino acid transport periplasmic proteinchromosome CDS2790950 765 + 0.479739
NA Bd3750 serine/threonine kinase with two-component sensor domainchromosome CDS3623581 1548 + 0.500646
NA Bd1506 Sensory transduction histidine kinaseschromosome CDS1426221 1869 - 0.530765
NA Bd2098 hypothetical protein predicted by Glimmer/Criticachromosome CDS2009958 984 + 0.480691
NA Bd3430 sensory transduction histidine kinasechromosome CDS3342324 2205 + 0.51746
NA Bd0668 conserved hypothetical proteinchromosome CDS618235 1491 - 0.520456
NA Bd0474 conserved hypothetical protein with FHA domainchromosome CDS443995 2025 + 0.53679
NA Bd3013 putative sigma factor regulation proteinchromosome CDS2911672 1752 + 0.51484
NA Bd2886 hypothetical protein predicted by Glimmer/Criticachromosome CDS2797221 231 + 0.450216
NA Bd2194 hypothetical protein predicted by Glimmer/Criticachromosome CDS2094834 945 - 0.491005
NA Bd0569 two-component response regulatorchromosome CDS527841 675 - 0.499259
NA Bd2335 chromosome CDS2232903 2142 + 0.520075
NA Bd0257 conserved hypothetical proteinchromosome CDS246713 756 - 0.47619
NA Bd1382 two-component hybrid sensor and regulatorchromosome CDS1307936 2139 - 0.531557
NA Bd0473 conserved hypothetical protein with FHA domainchromosome CDS442835 1161 + 0.529716
NA Bd3528 signal transduction histidine kinasechromosome CDS3430259 2517 - 0.524037
NA Bd2469 protein containing CheY-like receiverchromosome CDS2372666 1023 - 0.523949
NA Bd2179 putative Rhs family proteinchromosome CDS2080551 1419 + 0.496124
NA Bd3360 probable transcriptional regulatory protein zraRchromosome CDS3275494 1512 + 0.507937
NA Bd0301 conserved hypothetical proteinwith Hpt domainchromosome CDS292033 312 - 0.458333
NA Bd3126 sensor histidine kinasechromosome CDS3030138 2253 - 0.541944
NA Bd2450 ABC transporter, periplasmic amino acid-binding proteinchromosome CDS2359102 720 + 0.513889
NA Bd0429 two component response regulatorchromosome CDS406690 633 + 0.451817
NA Bd1238 hypothetical protein predicted by Glimmer/Criticachromosome CDS1174418 435 + 0.48046
NA Bd0300 Sensory transduction histidine kinasechromosome CDS288628 3399 - 0.523978
NA Bd0844 ABC-type transporter, periplasmic domainchromosome CDS792160 825 + 0.490909
NA Bd3819 hypothetical protein predicted by Glimmer/Criticachromosome CDS3687051 927 + 0.530744
NA Bd0299 two-component response regulatorchromosome CDS288113 504 - 0.486111
NA Bd1335 histidine kinasechromosome CDS1261982 1332 - 0.526276
NA Bd1376 putative ribose ABC transporterchromosome CDS1299964 1749 + 0.515723
NA Bd3367 Conserved sensor histidine kinasechromosome CDS3280014 1221 - 0.505324
NA Bd0607 conserved hypothetical proteinchromosome CDS565438 2148 + 0.5
NA Bd1822 conserved hypothetical proteinchromosome CDS1749084 1392 - 0.528736
NA Bd2364 hypothetical protein predicted by Glimmer/Criticachromosome CDS2265720 2304 - 0.502604
NA Bd0880 putative periplasmic protein cpxPchromosome CDS831842 435 + 0.510345
NA Bd3756 hypothetical protein predicted by Glimmer/Criticachromosome CDS3630237 636 + 0.474843
NA Bd3092 methyl-accepting chemotaxis proteinchromosome CDS2999578 1455 - 0.543643
NA Bd0472 conserved hypothetical protein with FHA domainchromosome CDS441162 1674 + 0.540621
NA Bd0161 conserved hypothetical proteinchromosome CDS151464 1458 - 0.48834
NA Bd0446 transcriptional regulatory proteinchromosome CDS418833 717 + 0.443515
NA Bd3101 putative transcriptional regulatorchromosome CDS3009912 942 + 0.511677
NA Bd3366 Conserved two-component system, regulatory proteinchromosome CDS3279490 525 - 0.527619
NA Bd3766 conserved hypothetical proteinchromosome CDS3639744 1884 + 0.524947
NA Bd3450 signal-transducing histidine kinasechromosome CDS3361205 876 + 0.517123
NA Bd1258 conserved hypothetical proteinchromosome CDS1194687 1197 + 0.516291
NA Bd1347 putative response regulatory proteinchromosome CDS1273649 459 - 0.494553
NA Bd2184 signal transduction sensor histidine kinasechromosome CDS2084273 1803 - 0.527454
NA Bd3613 Sensory transduction histidine kinasechromosome CDS3508721 1590 + 0.505031
NA Bd0121 chemotaxis proteinchromosome CDS106817 1488 - 0.522177
NA Bd0993 putative secreted proteinchromosome CDS937260 1590 + 0.489937
NA Bd3056 cyclic AMP receptor protein,catabolite gene activatorchromosome CDS2964469 753 + 0.5166
NA Bd2421 putative integral membrane protein containing HD domainchromosome CDS2327917 648 - 0.523148
NA Bd1237 probable amino-acid ABC transporterchromosome CDS1173393 738 - 0.501355
NA Bd0620 putative two-component sensor histidine kinasechromosome CDS578419 1923 + 0.517421
NA Bd0216 two-component sensor histidine kinasechromosome CDS203630 1968 + 0.504065
NA Bd2838 two-component hybrid sensor and regulatorchromosome CDS2745220 1719 - 0.511926
NA Bd1434 GGDEF domain proteinchromosome CDS1350795 1227 - 0.501222
NA Bd1786 conserved hypothetical proteinchromosome CDS1715066 744 - 0.487903
NA Bd0074 hypothetical protein predicted by Glimmer/Criticachromosome CDS67752 399 - 0.463659
NA Bd3555 hypothetical protein predicted by Glimmer/Criticachromosome CDS3457328 771 + 0.490272
NA Bd3813 universal stress proteinchromosome CDS3679964 936 + 0.483974
NA Bd1381 two-component hybrid sensor and regulatorchromosome CDS1305342 2598 + 0.516551
NA Bd3874 hypothetical protein predicted by Glimmer/Criticachromosome CDS3738214 372 + 0.508065
NA Bd1522 transcription regulator NtrC familychromosome CDS1445344 957 + 0.53605
NA Bd0401 hypothetical protein predicted by Glimmer/Criticachromosome CDS377590 2178 - 0.514233
NA Bd2143 two-component response regulatorchromosome CDS2047678 408 + 0.448529
NA Bd2111 probable anti-sigma factor antagonistchromosome CDS2022091 327 - 0.48318
NA Bd0505 hypothetical protein predicted by Glimmer/Criticachromosome CDS474641 822 + 0.46837
NA Bd3193 universal stress proteinchromosome CDS3115222 927 + 0.521036
NA Bd1349 putative amino acid ABC transporterchromosome CDS1274740 744 - 0.426075
NA Bd0584 two component sensor histidine kinasechromosome CDS542253 2001 - 0.524238
NA Bd3490 Two-component system response regulatorchromosome CDS3400896 663 + 0.494721
NA Bd0689 conserved hypothetical proteinchromosome CDS638755 825 + 0.505455
NA Bd0777 ABC-transporter, periplasmic domainchromosome CDS732662 729 - 0.491084
NA Bd0728 probable amino-acid ABC transporter binding proteinchromosome CDS690428 732 - 0.484973
NA Bd1502 putative cAMP-dependent protein kinasechromosome CDS1421423 1251 - 0.508393
NA Bd2602 transcriptional regulator Crp/FNR familychromosome CDS2521267 804 + 0.502488
MCP Bd2504 MCP chemotaxis proteinchromosome CDS2409864 1806 - 0.521041
afsQ Bd3527 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system')chromosome CDS3429568 690 - 0.502899
asgA Bd3305 conserved hypothetical proteinchromosome CDS3222436 1239 + 0.497175
atoC Bd1505 Acetoacetate metabolism regulatory protein atoCchromosome CDS1424812 1413 - 0.517339
bolA Bd1328 BolA-like proteinchromosome CDS1254551 333 + 0.525526
cheA Bd0578 histidine kinasechromosome CDS535429 1737 + 0.513529
cheA Bd2406 chemotaxis histidine kinasechromosome CDS2314310 1950 + 0.521026
cheA Bd3469 chemotaxis proteinchromosome CDS3379544 2016 - 0.525794
cheB Bd3467 protein-glutamate methylesterasechromosome CDS3377598 1065 - 0.546479
cheB Bd0580 cheB, glutamate methylesterasechromosome CDS537923 1563 + 0.550864
cheD Bd2829 chemotaxis proteinchromosome CDS2734311 471 - 0.545648
cheR Bd3468 chemotaxis protein methyltransferasechromosome CDS3378678 870 - 0.501149
cheR Bd2830 chemotaxis protein methyltransferasechromosome CDS2734783 825 - 0.484848
cheW Bd0579 chemotaxis proteinchromosome CDS537162 765 + 0.509804
cheW Bd3471 purine-binding chemotaxis protein CheWchromosome CDS3381862 498 + 0.506024
cheW2 Bd2828 chromosome CDS2732826 1476 - 0.51355
cheY Bd0102 chemotaxis response regulatorchromosome CDS95746 393 + 0.483461
cheY Bd3431 chemotaxis proteinchromosome CDS3344525 399 + 0.478697
cheY Bd1825 chemotaxis protein CheYchromosome CDS1750994 465 - 0.47957
cheY Bd2409 chemotaxis resonse regulator CheYchromosome CDS2317637 405 - 0.481481
cyaA Bd1116 Adenylate cyclasechromosome CDS1049538 1830 - 0.52459
cyaA10 Bd2671 putative adenylate cyclasechromosome CDS2589313 1368 + 0.496345
cyaB Bd0081 adenylate cyclase, putativechromosome CDS74777 1950 - 0.482564
cyaC Bd3072 probable adenylate cyclasechromosome CDS2982874 1443 + 0.532225
cyaK Bd2640 adenylate cyclasechromosome CDS2560017 2646 + 0.525321
dctD Bd2893 transcriptional regulatorchromosome CDS2803549 1359 + 0.534952
dksA Bd3519 dnaK deletion suppressor proteinchromosome CDS3422674 408 - 0.507353
dksA Bd3875 chromosome CDS3738678 381 + 0.467192
fis Bd0039 site-specific DNA inversion stimulation factorchromosome CDS35076 300 - 0.403333
flbD Bd3408 Transcriptional regulatory protein flbDchromosome CDS3318233 843 - 0.512456
glnE Bd0178 glutamate-ammonia-ligase adenylyltransferasechromosome CDS164672 2301 - 0.520209
glnH Bd0825 Glutamine transport system substrate-binding proteinchromosome CDS775217 789 - 0.504436
hik Bd2661 probable sensor/response regulator hybridchromosome CDS2581037 372 - 0.516129
hik Bd2833 sensor histidine kinasechromosome CDS2739557 1869 - 0.521669
hik Bd2849 sensor histidine kinase/response regulatorchromosome CDS2756291 2637 + 0.530527
hydG Bd3432 response regulator of hydrogenase 3 activity (sensor HydH)chromosome CDS3345257 1404 + 0.519231
kdpD Bd1758 two-component sensor KdpDchromosome CDS1695762 672 + 0.513393
kdpD Bd1855 sensor protein kdpDchromosome CDS1781522 1545 - 0.527508
kdpE Bd1759 two-component response regulator KdpEchromosome CDS1696430 693 + 0.52381
lexA Bd3511 transcriptional repressor of the SOS regulonchromosome CDS3418149 723 + 0.506224
mcp Bd1081 methyl-accepting chemotaxis proteinchromosome CDS1025069 1905 + 0.514961
mcp Bd3192 chemotaxis proteinchromosome CDS3113605 1539 + 0.54321
mcp Bd2503 MCP methyl chemotaxis proteinchromosome CDS2408053 1815 + 0.529477
mcp Bd3256 chemotaxis proteinchromosome CDS3174256 1464 - 0.535519
mcp Bd3177 putative methyl-accepting chemotaxis proteinchromosome CDS3095325 1647 - 0.536733
mcp Bd0932 chromosome CDS884401 1536 + 0.505859
mcp Bd1126 putative methyl-accepting chemotaxis proteinchromosome CDS1063257 1440 + 0.526389
mcpA Bd2831 methyl-accepting chemotaxis proteinchromosome CDS2735610 2151 - 0.517434
narL Bd2837 two-component response regulator homologchromosome CDS2744543 681 - 0.51395
nifA Bd0156 nitrogen fixation specific regulatory protein NifAchromosome CDS141134 1608 - 0.47699
nifA Bd3063 Transcriptional regulatorchromosome CDS2973490 1059 - 0.490085
ntrX Bd3035 nitrogen assimilation regulatory protein NtrXchromosome CDS2946479 1374 - 0.505095
ntrY Bd3036 nitrogen regulation protein NtrYchromosome CDS2947870 2214 - 0.525745
phoB Bd1017 DNA-binding response regulator PhoBchromosome CDS965290 678 + 0.520649
phoH Bd0761 PhoH-like ATPasechromosome CDS721971 1344 + 0.497024
phoR Bd1018 Phosphate regulon sensor protein phoRchromosome CDS965964 1434 + 0.505579
pilL Bd2167 putative PilL proteinchromosome CDS2069549 426 + 0.446009
pilR Bd1513 regulator protein pilRchromosome CDS1435547 1407 + 0.484719
pilS Bd1512 pilS sensor proteinchromosome CDS1433931 1578 + 0.517744
pkn Bd3148 chromosome CDS3060220 1962 + 0.530071
pleD Bd0367 two component response regulatorchromosome CDS344692 1032 + 0.521318
prkA Bd0228 serine protein kinasechromosome CDS214170 2076 + 0.482659
pt Bd0812 phosphotyrosine protein phosphatasechromosome CDS761229 516 - 0.50969
ragA Bd3394 two component response regulatorchromosome CDS3305198 675 - 0.447407
ragB Bd3393 RagB (Two-component sensor histidine kinase)chromosome CDS3303805 1413 - 0.502477
rbsB Bd2075 D-ribose periplasmic binding proteinchromosome CDS1981098 1803 - 0.483084
rsbU Bd0561 sigmaB regulation protein RsbUchromosome CDS519425 894 + 0.549217
rsbU Bd2404 Sigma factor sigB regulation protein rsbUchromosome CDS2310194 1839 - 0.506253
sixA Bd1011 Phosphohistidine phosphatasechromosome CDS957113 507 + 0.524655
torS Bd0499 Sensory transduction histidine kinasechromosome CDS465422 2301 + 0.538462
trg Bd2622 methyl-accepting chemotaxis proteinchromosome CDS2538427 1539 + 0.546459
tsr Bd1470 methyl accepting chemotaxis proteinchromosome CDS1390432 1599 - 0.541588
tsr Bd0262 chemotaxis proteinchromosome CDS249935 1416 + 0.518362
tsr Bd1469 methyl accepting chemotaxis proteinchromosome CDS1388611 1680 - 0.502976
typA Bd0137 GTP-binding elongation factor:elongation factor Tu domainchromosome CDS121875 1815 + 0.477135