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2024-05-07 03:29:34

Gene list

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COG category: Signal transduction mechanisms
Organism: Rhodopseudomonas palustris CGA009, CGA009

Number of genes found: 297

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Rhodopseudomonas palustris CGA009, CGA009
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPA0317 sensor histidine kinase with a response regulator receiver domainchromosome CDS344712 1911 - 0.66248
NA RPA1180 putative cylclic diguanylate phosphodiesterase (EAL)chromosome CDS1288180 1566 + 0.681354
NA RPA4138 conserved unknown proteinchromosome CDS4679786 384 - 0.661458
NA RPA0356 PTS system Hpr Kinasechromosome CDS385572 468 - 0.690171
NA RPA1681 sensor histidine kinase with a response regulator receiver domainchromosome CDS1870522 2592 - 0.653935
NA RPA1930 two-component transcriptional regulator, winged helix familychromosome CDS2165214 726 + 0.643251
NA RPA2291 putative Adenylate/Guanylate cyclasechromosome CDS2595381 2295 + 0.688453
NA RPA3661 Metal dependent phosphohydrolasechromosome CDS4135026 537 - 0.675978
NA RPA3316 possible chemotaxis cheB/cheR fusion proteinchromosome CDS3740366 3141 + 0.612225
NA RPA0991 possible transcriptional regulator, Crp/Fnr familychromosome CDS1095619 786 + 0.64631
NA RPA4790 response regulator receiver:histidine kinasechromosome CDS5407468 1653 + 0.652148
NA RPA4187 two component sigma-54-dependent transcriptional regulator, Fis familychromosome CDS4730298 1488 + 0.658602
NA RPA1327 Ser/Thr protein kinasechromosome CDS1446214 957 + 0.652038
NA RPA3958 conserved unknown proteinchromosome CDS4469382 6078 + 0.678019
NA RPA3996 probable transcriptional regulator, Crp/Fnr familychromosome CDS4518883 714 - 0.627451
NA RPA1335 probable FecR, iron siderophore sensor proteinchromosome CDS1458444 987 + 0.666667
NA RPA3598 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS4061895 1812 + 0.665011
NA RPA0286 putative diguanylate cyclase (GGDEF) with HAMP domainchromosome CDS313693 1674 + 0.667264
NA RPA0370 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domainschromosome CDS403032 2517 - 0.642431
NA RPA0786 putative Adenylate/Guanylate cyclasechromosome CDS871591 1395 - 0.687455
NA RPA1657 putative diguanylate cyclase (GGDEF)chromosome CDS1841261 1215 - 0.650206
NA RPA2109 two-component transcriptional regulator, LuxR familychromosome CDS2372808 636 - 0.628931
NA RPA1121 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)chromosome CDS1222982 2331 + 0.614758
NA RPA1246 conserved unknown proteinchromosome CDS1363800 702 + 0.662393
NA RPA0521 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)chromosome CDS581747 1710 + 0.660819
NA RPA4484 putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducerchromosome CDS5058377 534 - 0.636704
NA RPA1096 methyl-accepting chemotaxis sensory transducerchromosome CDS1201404 1752 - 0.67637
NA RPA0494 sensor histidine kinase with PAS/PAC and Response regulator receiver domainschromosome CDS546761 3282 + 0.648995
NA RPA1144 unknown proteinchromosome CDS1251915 792 - 0.616162
NA RPA2292 sensor histidine kinasechromosome CDS2597690 1425 - 0.674386
NA RPA2984 putative diguanylate cyclase (GGDEF)chromosome CDS3380294 1152 - 0.655382
NA RPA4524 sensor histidine kinasechromosome CDS5104629 1557 - 0.678227
NA RPA3750 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS4241549 1704 - 0.667253
NA RPA4789 sensor histidine kinasechromosome CDS5405300 2112 + 0.657197
NA RPA0764 conserved hypothetical proteinchromosome CDS846490 435 - 0.641379
NA RPA4367 sensor histidine kinasechromosome CDS4916339 1389 - 0.673866
NA RPA1932 sensor histidine kinasechromosome CDS2167673 1449 + 0.670807
NA RPA0767 putative diguanylate cyclase (GGDEF) with PAS/PAC domainchromosome CDS850515 942 + 0.667728
NA RPA4094 conserved hypothetical proteinchromosome CDS4634535 837 - 0.624851
NA RPA2299 possible two-component transcriptional regulator, LuxR familychromosome CDS2606224 747 + 0.641232
NA RPA0886 putative diguanylate cyclase (GGDEF)chromosome CDS983016 1509 + 0.654076
NA RPA0777 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domainchromosome CDS860813 2715 - 0.651565
NA RPA1296 putative diguanylate cyclase (GGDEF) with HAMP domainchromosome CDS1414958 1764 + 0.661565
NA RPA3863 transcriptional regulator, Crp/Fnr familychromosome CDS4363862 753 - 0.633466
NA RPA3133 response regulator receiver (CheY-like protein)chromosome CDS3540354 366 - 0.595628
NA RPA3419 possible transcriptional regulator, Crp/Fnr familychromosome CDS3861798 765 - 0.658824
NA RPA4173 putative diguanylate cyclase (GGDEF)chromosome CDS4718430 753 - 0.683931
NA RPA4830 Metal dependent phosphohydrolase with a response regulator receiver domainchromosome CDS5453665 1113 - 0.655885
NA RPA4010 response regulator receiver (CheY-like protein)chromosome CDS4534391 378 + 0.648148
NA RPA2769 putative diguanylate cyclase (GGDEF)chromosome CDS3140244 1236 + 0.661003
NA RPA0980 sensor histidine kinase with a PAS domainchromosome CDS1080263 1353 + 0.654841
NA RPA0852 two-component transcriptional regulator, LuxR familychromosome CDS944214 678 + 0.647493
NA RPA1489 two-component transcriptional regulator, LuxR familychromosome CDS1652068 672 - 0.659226
NA RPA4663 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS5256729 2043 - 0.683309
NA RPA1965 putative Adenylate/Guanylate cyclasechromosome CDS2210911 1989 - 0.641528
NA RPA3216 sensor histidine kinase with multiple PAS and a response regulator receiver domainchromosome CDS3632669 2061 + 0.679282
NA RPA3751 unknown proteinchromosome CDS4243306 456 - 0.618421
NA RPA3546 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS4011242 1956 - 0.678425
NA RPA3318 transcriptional regulator, Crp/Fnr familychromosome CDS3743984 729 - 0.59808
NA RPA3054 possible transcriptional regulator, Crp/Fnr familychromosome CDS3456869 774 + 0.627907
NA RPA4383 conserved unknown proteinchromosome CDS4934735 534 + 0.64794
NA RPA3018 response regulator receiver:histidine kinasechromosome CDS3416877 1137 + 0.650836
NA RPA3570 two-component transcriptional regulator, winged helix familychromosome CDS4035633 723 + 0.687414
NA RPA1315 two-component transcriptional regulator, LuxR familychromosome CDS1435620 687 + 0.636099
NA RPA4422 transcriptional regulator, Crp/Fnr familychromosome CDS4982674 714 - 0.647059
NA RPA3380 response regulator receiver (CheY-like protein)chromosome CDS3821616 546 + 0.642857
NA RPA3014 two-component transcriptional regulator, LuxR familychromosome CDS3410877 708 + 0.635593
NA RPA2433 response regulator receiver (CheY-like protein)chromosome CDS2762565 444 - 0.599099
NA RPA2839 response regulator receiver (CheY-like protein)chromosome CDS3215009 375 + 0.650667
NA RPA3170 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS and GAF domainschromosome CDS3576134 2622 + 0.651411
NA RPA1314 response regulator receiver (CheY-like protein)chromosome CDS1435192 432 + 0.634259
NA RPA4512 possible response regulator receiverchromosome CDS5093642 312 - 0.657051
NA RPA4140 sensor histidine kinase with a PAS domainchromosome CDS4683029 1047 + 0.659981
NA RPA3622 hypothetical proteinchromosome CDS4085029 285 - 0.652632
NA RPA0320 autoinducer (acylhomoserine lactone) synthasechromosome CDS348608 657 - 0.652968
NA RPA0079 sensor histidine kinase with multiple PAS domainschromosome CDS89417 2547 - 0.664311
NA RPA1858 sensor histidine kinase with a PAS domainchromosome CDS2086715 1833 + 0.657392
NA RPA1260 Universal stress protein (Usp)chromosome CDS1381578 906 + 0.662252
NA RPA0941 conserved hypothetical proteinchromosome CDS1040987 324 - 0.580247
NA RPA1850 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS2078135 1998 - 0.644645
NA RPA4684 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS5285027 1680 + 0.669643
NA RPA3185 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS3593862 2019 + 0.65478
NA RPA0914 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domainchromosome CDS1014871 2880 - 0.663542
NA RPA4639 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS5221609 1695 - 0.631268
NA RPA2368 pseudogene-two-component transcriptional regulator, winged helix familychromosome CDS2683529 234 - 0.632479
NA RPA4481 methyl-accepting chemotaxis sensory transducerchromosome CDS5055101 1323 - 0.673469
NA RPA4307 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS4856166 1686 - 0.670819
NA RPA2108 response regulator receiver (CheY-like protein)chromosome CDS2372333 387 - 0.617571
NA RPA0007 putative signal transduction histidine kinase with PAS/PAC domainschromosome CDS9442 1452 - 0.67562
NA RPA0635 sensor histidine kinasechromosome CDS701052 1479 + 0.655849
NA RPA3939 conserved unknown proteinchromosome CDS4450387 531 + 0.653484
NA RPA0754 putative signal transduction histidine kinase with PAS/PAC domainschromosome CDS834822 1437 - 0.639527
NA RPA0992 probable transcriptional regulator, Crp/Fnr familychromosome CDS1096426 732 - 0.622951
NA RPA4417 sensor histidine kinase with PAS/PAC and response regulator receiver domainschromosome CDS4975255 2622 - 0.657132
NA RPA3934 sensor histidine kinase with a PAC motif and a response regulator receiver domainchromosome CDS4444803 1209 + 0.66584
NA RPA4112 putative diguanylate cyclase (GGDEF)chromosome CDS4654732 894 + 0.599553
NA RPA4223 response regulator receiver (CheY-like protein) with unknown domainchromosome CDS4766223 807 - 0.627014
NA RPA3022 putative diguanylate cyclase (GGDEF)chromosome CDS3423592 1167 + 0.669237
NA RPA1481 response regulator receiver (CheY-like protein)chromosome CDS1643544 363 + 0.61708
NA RPA3933 sensor histidine kinase with multiple PAS and a response regulator receiver domainchromosome CDS4441771 3066 + 0.661774
NA RPA1558 sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domainchromosome CDS1728789 2712 + 0.662611
NA RPA0583 sensor histidine kinase with PAS/PAC and Response regulator receiver domainschromosome CDS645698 2742 + 0.660832
NA RPA4226 putative signal transduction histidine kinase with Chase domainchromosome CDS4768147 1767 - 0.641766
NA RPA1634 conserved unknown proteinchromosome CDS1815917 429 + 0.629371
NA RPA0431 methyl-accepting chemotaxis receptor/sensory transducer with PAS domainchromosome CDS473947 1683 - 0.636364
NA RPA2074 response regulator receiver (CheY-like protein)chromosome CDS2333431 369 - 0.620596
NA RPA4523 response regulator receiver (CheY-like protein)chromosome CDS5103980 390 - 0.664103
NA RPA3770 conserved unknown proteinchromosome CDS4265634 504 - 0.611111
NA RPA4513 putative signal transduction histidine kinasechromosome CDS5094008 1005 - 0.642786
NA RPA1248 two-component transcriptional regulator, LuxR familychromosome CDS1365644 927 - 0.669903
NA RPA3106 putative signal transduction histidine kinase with PAS/PAC domainchromosome CDS3512391 1107 - 0.64318
NA RPA4791 two-component transcriptional regulator, winged helix familychromosome CDS5409117 741 + 0.666667
NA RPA4302 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS4848828 2193 - 0.654355
NA RPA4368 two-component transcriptional regulator, winged helix familychromosome CDS4918006 723 - 0.684647
NA RPA3940 Universal stress protein (Usp)chromosome CDS4450961 432 + 0.664352
NA RPA0783 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)chromosome CDS867126 1818 - 0.648515
NA RPA4249 response regulator receiver (CheY-like protein)chromosome CDS4793406 393 + 0.641221
NA RPA1671 putative serine/threonine protein kinasechromosome CDS1855925 1440 + 0.665972
NA RPA0856 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS951429 2139 - 0.657317
NA RPA4483 methyl-accepting chemotaxis sensory transducerchromosome CDS5057092 1251 - 0.668265
NA RPA1556 phosphotransfer protein with response regulator receiver and Hpt domainschromosome CDS1727226 690 + 0.631884
NA RPA4816 two component sensor histidine kinasechromosome CDS5440041 1377 - 0.715323
NA RPA2075 putative signal transduction histidine kinase with GAF and PAS/PAC domainschromosome CDS2333796 1902 - 0.642482
NA RPA0561 hypothetical proteinchromosome CDS623297 606 - 0.646865
NA RPA0283 two-component transcriptional regulator, winged helix familychromosome CDS311368 687 - 0.653566
NA RPA4691 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS5293431 1971 + 0.648402
NA RPA1680 putative response regulator and cylclic diguanylate phosphodiesterase (EAL)chromosome CDS1869241 1251 + 0.649081
NA RPA0390 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domainschromosome CDS427489 2238 + 0.659071
NA RPA1713 possible cyclic nucleotide-binding domainchromosome CDS1913941 675 + 0.634074
NA RPA1728 conserved unknown proteinchromosome CDS1929247 4260 - 0.599531
NA RPA0377 conserved unknown proteinchromosome CDS410486 825 + 0.631515
NA RPA2969 unknown proteinchromosome CDS3363340 612 + 0.666667
NA RPA3187 sensor histidine kinase with a PAS/PAC domainchromosome CDS3596427 2754 - 0.678286
NA RPA4306 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS4854274 1686 - 0.651246
NA RPA4289 putative dual use protein Tyr:Ser/Thr phosphatasechromosome CDS4837083 558 + 0.724014
NA RPA1557 response regulator receiver with duplicated domainschromosome CDS1727937 837 + 0.640382
NA RPA1642 putative diguanylate cyclase (GGDEF)chromosome CDS1826387 1515 + 0.645545
NA RPA0144 Sulfate transporter/antisigma-factor antagonist domainchromosome CDS163645 324 - 0.583333
NA RPA0282 Cyclic nucleotide binding proteinchromosome CDS310879 450 - 0.671111
NA RPA3571 two component sensor histidine kinasechromosome CDS4036352 1335 + 0.69588
NA RPA1931 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS2166162 1299 + 0.657429
NA RPA1884 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS2116794 1680 + 0.616071
NA RPA3616 putative diguanylate cyclase (GGDEF) with PAS/PAC domainchromosome CDS4078368 1935 + 0.651163
NA RPA3434 Universal stress protein (Usp)chromosome CDS3875337 645 + 0.635659
NA RPA2476 putative diguanylate cyclase (GGDEF)chromosome CDS2814670 1068 - 0.650749
NA RPA1295 putative signal transduction histidine kinasechromosome CDS1413532 1212 + 0.673267
NA RPA3680 possible pilus assembly protein cpaEchromosome CDS4152297 1272 + 0.65173
NA RPA4322 response regulator receiver (CheY-like protein)chromosome CDS4872601 459 + 0.651416
NA RPA4449 pmethyl-accepting chemotaxis receptor/sensory transducerchromosome CDS5022729 1692 + 0.654846
NA RPA0145 Metal dependent phosphohydrolase with a response regulator receiver domainchromosome CDS164246 1167 + 0.635818
NA RPA2658 hypothetical proteinchromosome CDS3024595 1392 - 0.698276
NA RPA0819 conserved hypothetical proteinchromosome CDS915791 1806 + 0.493355
NA RPA3076 putative diguanylate cyclase (GGDEF)chromosome CDS3481244 1350 + 0.647407
NA RPA2479 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS2818822 1740 + 0.628161
NA RPA3184 putative cylclic diguanylate phosphodiesterase (EAL)chromosome CDS3591608 1350 - 0.562963
NA RPA1818 putative diguanylate cyclase (GGDEF)chromosome CDS2045066 1290 - 0.631783
NA RPA1938 sensor histidine kinase, possible pleCchromosome CDS2178903 2340 - 0.64188
NA RPA4565 putative diguanylate cyclase (GGDEF)chromosome CDS5144704 1203 + 0.660848
NA RPA1515 conserved unknown proteinchromosome CDS1683019 837 - 0.678614
NA RPA0136 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS154100 1710 - 0.655556
NA RPA0907 response regulator receiver (CheY-like protein)chromosome CDS1009176 360 + 0.6
NA RPA3101 conserved unknown proteinchromosome CDS3507093 486 - 0.615226
NA RPA0766 transcriptional regulator, Crp/Fnr familychromosome CDS849702 708 + 0.662429
NA RPA1796 putative Adenylate/Guanylate cyclasechromosome CDS2013917 1575 + 0.636825
NA RPA4686 possible ABC transporter, periplasmic amino acid-binding proteinchromosome CDS5288418 756 - 0.648148
NA RPA1670 Metallo-phosphoesterasechromosome CDS1855181 741 + 0.673414
NA RPA3353 putative serine/threonine protein phosphatasechromosome CDS3793955 717 - 0.585774
NA RPA4753 histidine kinase with a response regulator receiver domainchromosome CDS5364022 1218 - 0.704434
NA RPA0529 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)chromosome CDS588149 1743 + 0.669535
NA RPA1090 transcriptional regulatorn, Crp/Fnr familychromosome CDS1196347 678 + 0.681416
NA RPA4245 conserved unknown proteinchromosome CDS4789394 834 + 0.647482
NA RPA2152 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domainchromosome CDS2421412 2130 + 0.649765
NA RPA2077 probable transcriptional regulator, Crp/Fnr familychromosome CDS2336808 927 - 0.629989
NA RPA4009 putative signal transduction histidine kinase with GAF domainchromosome CDS4532346 2049 + 0.660322
NA RPA3814 Calcium-binding EF-handchromosome CDS4311084 771 - 0.649805
NA RPA3792 putative diguanylate cyclase (GGDEF)chromosome CDS4290117 1140 - 0.673684
NA RPA4312 putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducerchromosome CDS4863032 525 - 0.580952
NA RPA0501 BolA-like proteinchromosome CDS556277 270 + 0.625926
NA RPA4738 response regulator receiver (CheY-like protein)chromosome CDS5349417 381 + 0.64042
NA RPA2432 putative signal transduction histidine kinase with response regulator receiver domainchromosome CDS2761477 1092 - 0.67033
NA RPA1675 methyl-accepting chemotaxis receptor/sensory transducer with PAS domainchromosome CDS1862118 2151 + 0.646676
NA RPA3994 putative diguanylate cyclase (GGDEF)chromosome CDS4517032 1149 - 0.655352
NA RPA1640 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS1822478 1692 - 0.648936
NA RPA1972 sensor histidine kinasechromosome CDS2220180 1599 - 0.669168
NA RPA1822 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS2049434 2067 + 0.644412
NA RPA0259 HTransmembrane sensor and HAMP domainschromosome CDS284749 783 - 0.643678
NA RPA4167 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domainschromosome CDS4711028 2739 - 0.654984
NA RPA4482 putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducerchromosome CDS5056386 537 - 0.62756
NA RPA1175 response regulator receiver (CheY-like protein)chromosome CDS1283518 396 + 0.570707
NA RPA2111 PAS domain:sigma-54-dependent transcriptional regulator, Fis familychromosome CDS2374328 1926 - 0.65161
NA RPA0234 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS259203 1692 - 0.664303
NA RPA1682 ptwo-component transcriptional regulator, LuxR familychromosome CDS1873536 627 + 0.634769
NA RPA4203 putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducerchromosome CDS4746424 522 - 0.582375
NA RPA0249 hypothetical proteinchromosome CDS273362 783 - 0.659004
NA RPA3832 putative diguanylate cyclase (GGDEF) with PAS/PAC domainchromosome CDS4325281 1071 - 0.654528
NA RPA1790 putative diguanylate cyclase (GGDEF)chromosome CDS2006289 819 + 0.676435
NA RPA2957 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)chromosome CDS3345579 2649 + 0.664779
NA RPA2367 two component sensor histidine kinase, possible AdeSchromosome CDS2682429 1104 - 0.641304
NA RPA4311 methyl-accepting chemotaxis sensory transducerchromosome CDS4861753 1305 - 0.673563
NA RPA4000 Adenylate/Guanylate cyclasechromosome CDS4521683 3318 + 0.633816
NA RPA0447 possible phoH-like proteinchromosome CDS493487 882 - 0.672336
NA RPA3219 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)chromosome CDS3636661 1971 - 0.68138
NA RPA1716 putative diguanylate cyclase (GGDEF)chromosome CDS1916440 2211 + 0.634555
NA RPA3132 putative diguanylate cyclase (GGDEF) with response regulator receiver domainchromosome CDS3538970 1374 - 0.650655
NA RPA4202 methyl-accepting chemotaxis sensory transducerchromosome CDS4745124 1326 - 0.670437
NA RPA1600 BolA-like proteinchromosome CDS1779811 237 + 0.654008
NA RPA4137 conserved unknown proteinchromosome CDS4679131 432 - 0.62963
NA RPA0139 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS157930 2202 - 0.65168
NA RPA1322 putative signal transduction histidine kinasechromosome CDS1440217 699 + 0.58226
NA RPA4638 methyl-accepting chemotaxis receptor/sensory transducerchromosome CDS5219533 1698 - 0.637809
NA RPA1249 sensor histidine kinase with a response regulator receiver domainchromosome CDS1366560 3369 - 0.640249
NA RPA1340 probable FecR, iron siderophore sensor proteinchromosome CDS1474165 984 + 0.674797
NA RPA3200 putative dual serine/threonine-protein kinase/phosphatasechromosome CDS3613758 1797 - 0.648303
NA RPA2434 sensor histidine kinasechromosome CDS2763005 1533 - 0.645793
NA RPA4244 conserved unknown proteinchromosome CDS4788368 837 - 0.673835
NA RPA2076 putative signal transduction histidine kinasechromosome CDS2336125 687 - 0.649199
NA RPA2369 pseudogene-two-component transcriptional regulator, winged helix familychromosome CDS2683800 414 - 0.594203
NA RPA4817 two-component transcriptional regulator, winged helix familychromosome CDS5441414 666 - 0.675676
NA RPA1767 sensor histidine kinase with a PAC motif and a response regulator receiver domainchromosome CDS1978647 2310 - 0.664502
NA RPA1202 putative Adenylate/Guanylate cyclasechromosome CDS1312686 1200 + 0.665
NA RPA3281 probable FecR, iron siderophore sensor proteinchromosome CDS3699586 966 - 0.645963
NA RPA2787 putative signal transduction histidine kinase with PAS/PAC domainchromosome CDS3160874 1059 + 0.585458
NA RPA2135 sensor histidine kinase with a response regulator receiver domainchromosome CDS2398973 2124 - 0.648776
NA RPA0981 sensor histidine kinase with multiple PAS and a response regulator receiver domainchromosome CDS1081721 2388 + 0.657873
NA RPA3410 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domainschromosome CDS3849886 2475 - 0.66101
NA RPA4797 ABC transporter, amino acid binding proteinchromosome CDS5414421 1035 + 0.617391
NA RPA1313 sensor histidine kinase with multiple PAS/PAC domainschromosome CDS1433238 1899 + 0.652449
ChrR RPA0549 sensor protein ChrR, cytochrome cycA regulatorchromosome CDS611414 663 - 0.708899
aadR RPA4234 anaerobic aromatic degradation regulator aadR, Crp/Fnr familychromosome CDS4776328 720 - 0.616667
aapJ-1 RPA2560 ABC transporter, periplasmic amino acid binding protein aapJ-1chromosome CDS2907057 1017 + 0.624385
aapJ-2 RPA2628 polar amino acid ABC transport substrate-binding protein, aapJ-2chromosome CDS2989377 1023 + 0.636364
aceK RPA0347 putative isocitrate dehydrogenase kinase/phosphatasechromosome CDS375493 1833 - 0.652482
anfA RPA1439 Sigma-54 dependent, Iron nitrogenase transcriptional regulator, AnfAchromosome CDS1595226 1629 - 0.634745
arsC3 RPA3555 arsenate reductasechromosome CDS4023123 528 - 0.676136
arsC4 RPA4529 putative arsenate reductasechromosome CDS5110793 471 - 0.66242
bipA RPA0408 conserved GTPasechromosome CDS450314 1824 + 0.64364
cckA RPA3882 sensor histidine kinase with multiple PAS and a response regulator receiver domainchromosome CDS4381871 2649 - 0.668932
cheA1 RPA0142 multidomain chemotaxis histidine kinase CheA1 (Hpt, CheA, & CheW domains)chromosome CDS161217 2067 - 0.658442
cheA2 RPA1627 multidomain chemotaxis histidine kinase CheA2 (Hpt, CheA, CheW, & Resp. Reg. Rec. domains)chromosome CDS1807250 2814 + 0.661692
cheA3 RPA1676 multidomain chemotaxis histidine kinase CheA3 (Hpt, CheA, CheW, & Resp. Reg. Rec. domains)chromosome CDS1864447 2814 + 0.661336
cheB1 RPA0137 chemotaxis methylesterase, CheB1chromosome CDS155814 1092 - 0.661172
cheB2 RPA1630 chemotaxis methylesterase, CheB2chromosome CDS1811072 1176 + 0.655612
cheR1 RPA0138 chemotaxis methyltransferase, CheR1chromosome CDS156926 843 - 0.595492
cheR2 RPA1631 chemotaxis methyltransferase, CheR2chromosome CDS1812244 879 + 0.648464
cheR3 RPA1678 chemotaxis methyltransferase, CheR3chromosome CDS1867811 876 + 0.608447
cheW1-1 RPA0141 chemotaxis signal transduction/oligomerization protein CheW1-1chromosome CDS160747 471 - 0.630573
cheW1-3 RPA0140 chemotaxis signal transduction/oligomerization protein CheW1-2chromosome CDS160198 489 - 0.656442
cheW2 RPA1628 chemotaxis signal transduction/oligomerization protein CheW2chromosome CDS1810060 501 + 0.666667
cheW3 RPA1677 chemotaxis signal transduction/oligomerization protein CheW3chromosome CDS1867257 501 + 0.666667
cheY1 RPA0143 response regulator receiver, CheY1chromosome CDS163280 366 - 0.639344
cheY2 RPA1629 chemotaxis response regulator, CheY2chromosome CDS1810628 366 + 0.620219
cheY3 RPA1674 response regulator receiver, CheY3chromosome CDS1860968 504 + 0.664683
chvI RPA0358 two-component transcriptional regulator ChvI, winged helix familychromosome CDS387944 702 - 0.635328
ctrA RPA1632 two-component cell cycle transcriptional regulator ctrA, winged helix familychromosome CDS1813413 702 - 0.60114
dksA RPA3907 DnaK suppressor protein DksAchromosome CDS4410076 429 - 0.573427
exoS, chvG RPA0357 two component sensor histidine kinasechromosome CDS386036 1746 - 0.671821
fecR3 RPA1348 probable FecR, iron siderophore sensor proteinchromosome CDS1492975 969 + 0.674923
fecR4 RPA2381 probable FecR, iron siderophore sensor proteinchromosome CDS2699387 1017 - 0.679449
feuP RPA1915 two-component transcriptional regulator FeuP, winged helix familychromosome CDS2147990 675 + 0.674074
feuQ RPA1916 two-component sensor histidine kinase, FeuQchromosome CDS2148680 1392 + 0.682471
fixJ RPA4248 two-component nitrogen fixation transcriptional regulator fixJ, LuxR familychromosome CDS4792709 612 + 0.629085
fixK2 RPA4250 nitrogen fixation transcriptional regulator fixK2, Crp/Fnr familychromosome CDS4793997 693 + 0.666667
fixL RPA4247 two component low oxygen sensor histidine kinase with PAS domains, fixLchromosome CDS4791190 1527 + 0.645711
flbD RPA1268 two-component flagellar transcriptional activator FlbD, Fis-typechromosome CDS1389068 1380 + 0.668841
glnE RPA1933 putative glutamate-ammonia-ligase adenylyltransferasechromosome CDS2169118 2973 + 0.674067
hbaR RPA0673 Hydroxybenzoate anaerobic degradation regulatory protein HbaR, Crp/Fnr familychromosome CDS743331 726 - 0.651515
hoxA RPA0979 two component sigma-54-dependent hydrogenase transcriptional regulator hoxA, Fis familychromosome CDS1078825 1449 + 0.648723
kaiC RPA0009 circadian clock proteinchromosome CDS11184 1692 - 0.63357
kdpD RPA3001 two component osmosensitive K+channel and sensor histidine kinase, KdpDchromosome CDS3396563 2724 - 0.66116
kdpE RPA3000 two-component osmotic transcriptional regulator kdpE, winged helix familychromosome CDS3395874 684 - 0.625731
lexA RPA2903 SOS response transcriptional repressor, lexAchromosome CDS3279537 828 + 0.64372
nasT RPA3706 putative two-component response regulator:antitermination factor NasTchromosome CDS4185092 585 + 0.620513
nifA RPA4632 Mo/Fe nitrogenase specific transcriptional regulator, NifAchromosome CDS5212401 1755 - 0.647863
nnrR RPA4143 putative nitric oxide responsive transcriptional regulator NnrR, Crp/Fnr familychromosome CDS4685360 711 + 0.675106
ntrB RPA2592 nitrogen regulatory signal transduction histidine kinase NtrBchromosome CDS2947222 1173 + 0.640239
ntrC RPA2593 nitrogen assimilation regulatory protein ntrC Response regulatorchromosome CDS2948404 1443 + 0.661816
ntrX RPA2595 nitrogen assimilation regulatory protein ntrX-Response regulatorchromosome CDS2952314 1368 + 0.638889
ntrY RPA2594 nitrogen regulatory signal transduction histidine kinase NtrYchromosome CDS2950006 2292 + 0.645288
phoB RPA4775 two-component phosphate transcriptional regulator PhoBchromosome CDS5390650 714 - 0.673669
phoR RPA4781 two component sensor histidine kinase phoRchromosome CDS5396238 1350 - 0.667407
phyB1 RPA3015 Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB1chromosome CDS3411808 2277 + 0.64383
phyB2 RPA3016 Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB2chromosome CDS3414088 2328 + 0.643041
phyB3 RPA0122 Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB3chromosome CDS136734 2280 + 0.683333
phyB4 RPA1490 Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4chromosome CDS1652759 2313 - 0.680934
phyB5 RPA0990 Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB5chromosome CDS1092866 2538 - 0.654452
ppsR1 RPA1529 transcriptional regulator PpsR1; Fis familychromosome CDS1697302 1455 + 0.641237
ppsR2 RPA1536 transcriptional regulator PpsR2; Fis familychromosome CDS1703829 1395 + 0.644444
ptsN1 RPA0052 putative nitrogen regulatory IIA proteinchromosome CDS58627 462 + 0.677489
ptsN2 RPA2999 putative nitrogen regulatory IIA proteinchromosome CDS3395404 447 - 0.66443
ptsP RPA0605 nitrogen regulatory protein PTSI(NTR)chromosome CDS671957 2403 + 0.668331
regR RPA0571 two-component transcriptional regulator RegR, Fis familychromosome CDS633579 555 - 0.677477
regS RPA0572 two component sensor histidine kinase, RegSchromosome CDS634225 1323 - 0.668934
relA RPA2693 GTP pyrophosphokinasechromosome CDS3063892 2283 + 0.651774
rphyB RPA3017 response regulator receiver (CheY-like protein)chromosome CDS3416416 465 + 0.621505
tspO RPA1533 tryptophan-rich sensory proteinchromosome CDS1702188 465 + 0.662366
vieA RPA4516 putative cylclic diguanylate phosphodiesterase (EAL)chromosome CDS5098179 1215 + 0.668313
vnfA RPA1374 Sigma-54 dependent, Vanadium nitrogenase transcriptional regulator, VnfAchromosome CDS1520222 1635 + 0.610398