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2024-05-03 00:32:54

Gene list

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COG category: Signal transduction mechanisms
Organism: Photorhabdus luminescens subsp. laumondii TTO1, TTO1

Number of genes found: 153

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Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu0919 chromosome CDS1059198 723 - 0.372061
NA plu2007 chromosome CDS2377058 681 - 0.368576
NA plu1817 chromosome CDS2164640 603 - 0.311774
NA plu4416 chromosome CDS5164331 783 - 0.37931
NA plu2009 chromosome CDS2378710 684 - 0.339181
NA plu4441 chromosome CDS5188299 372 - 0.298387
NA plu0921 chromosome CDS1061265 723 - 0.348548
NA plu4313 chromosome CDS5038749 684 - 0.482456
NA plu0925 chromosome CDS1065080 723 - 0.359613
NA plu3311 chromosome CDS3926863 1338 - 0.475336
NA plu0928 chromosome CDS1070144 234 + 0.465812
NA plu3798 chromosome CDS4463984 405 + 0.459259
NA plu2016 chromosome CDS2383627 693 - 0.354978
NA plu2366 chromosome CDS2784255 258 - 0.565891
NA plu0923 chromosome CDS1063313 723 - 0.338866
NA plu3025 chromosome CDS3525239 1437 - 0.424495
NA plu2004 chromosome CDS2374927 681 - 0.372981
NA plu2003 chromosome CDS2373955 681 - 0.352423
NA plu2885 chromosome CDS3417860 276 + 0.394928
NA plu3219 chromosome CDS3807331 690 + 0.376812
NA plu0362 chromosome CDS388056 801 - 0.479401
NA plu4277 chromosome CDS5002643 612 - 0.369281
NA plu2365 chromosome CDS2783921 390 - 0.592308
NA plu2001 chromosome CDS2372413 696 - 0.354885
NA plu1041 chromosome CDS1223042 669 - 0.491779
NA plu0922 chromosome CDS1062305 723 - 0.35823
NA plu2018 chromosome CDS2385750 723 - 0.340249
NA plu0115 chromosome CDS118126 474 + 0.434599
NA plu2002 chromosome CDS2373256 672 - 0.363095
NA plu0240 chromosome CDS255525 1455 - 0.454983
NA plu2011 chromosome CDS2380505 681 - 0.346549
NA plu2013 chromosome CDS2382053 681 - 0.358297
NA plu3720 chromosome CDS4385662 681 - 0.349486
NA plu2008 chromosome CDS2377769 681 - 0.33627
NA plu4544 chromosome CDS5305528 402 - 0.400498
NA plu3313 chromosome CDS3929046 1497 - 0.438878
NA plu2244 chromosome CDS2638897 825 + 0.419394
NA plu0641 chromosome CDS733074 522 + 0.356322
NA plu0945 chromosome CDS1086747 690 - 0.376812
NA plu3721 chromosome CDS4386396 693 - 0.349206
NA plu2030 chromosome CDS2400524 429 + 0.379953
NA plu2041 chromosome CDS2410707 1233 - 0.36253
NA plu3477 chromosome CDS4077399 372 + 0.370968
NA plu3729 chromosome CDS4396579 567 - 0.333333
NA plu2684 chromosome CDS3188165 498 - 0.425703
NA plu1983 chromosome CDS2354123 696 - 0.326149
NA plu3047 chromosome CDS3546077 2691 + 0.36715
NA plu0918 chromosome CDS1058315 723 - 0.360996
NA plu4484 chromosome CDS5238785 774 + 0.412145
NA plu3734 chromosome CDS4402190 675 - 0.315556
NA plu0748 chromosome CDS862964 1035 + 0.422222
NA plu0103 chromosome CDS100832 627 + 0.342903
NA plu0219 chromosome CDS226044 837 + 0.461171
NA plu1033 chromosome CDS1215243 252 + 0.511905
NA plu2012 chromosome CDS2381346 681 - 0.346549
NA plu0924 chromosome CDS1064197 723 - 0.35408
NA plu2143 chromosome CDS2525733 621 - 0.363929
NA plu1854 chromosome CDS2202807 1635 + 0.437309
NA plu3735 chromosome CDS4403988 666 + 0.313814
NA plu0920 chromosome CDS1060242 723 - 0.352697
NA plu2178 chromosome CDS2563626 945 - 0.422222
NA plu2942 chromosome CDS3452873 645 + 0.4
NA plu2286 chromosome CDS2683422 1260 - 0.457143
NA plu2010 chromosome CDS2379664 681 - 0.342144
NA plu0636 chromosome CDS730185 522 + 0.37931
NA plu0740 chromosome CDS851429 1014 - 0.476331
NA plu2771 chromosome CDS3284505 663 - 0.309201
NA plu4487 chromosome CDS5241485 774 + 0.447028
NA plu1233 chromosome CDS1424476 1932 + 0.401139
NA plu2019 chromosome CDS2387125 675 - 0.30963
NA plu3971 chromosome CDS4658036 621 + 0.446055
NA plu3221 chromosome CDS3809059 669 + 0.328849
NA plu2022 chromosome CDS2390996 918 + 0.413943
NA plu2006 chromosome CDS2376348 681 - 0.365639
NA plu2005 chromosome CDS2375637 681 - 0.35536
NA plu2032 chromosome CDS2401730 438 + 0.381279
NA plu4521 chromosome CDS5278559 723 + 0.406639
NA plu3443 chromosome CDS4056687 546 - 0.457875
NA plu3220 chromosome CDS3808060 687 + 0.356623
NA plu0102 chromosome CDS99468 1365 + 0.354579
NA plu0822 chromosome CDS953840 1227 - 0.453953
NA plu0367 chromosome CDS394200 1287 - 0.469308
NA plu1311 chromosome CDS1520262 1050 - 0.484762
NA plu4220 chromosome CDS4934952 2601 - 0.466744
aceK plu4394 isocitrate dehydrogenase kinase/phosphatase (IDH kinase/phosphatase)chromosome CDS5132409 1758 - 0.427759
apaH plu0607 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (Diadenosine tetraphosphatase) (Ap4A hydrolase)chromosome CDS689919 828 - 0.429952
arcA plu0562 negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) (dye resistance protein)chromosome CDS634513 717 - 0.440725
arcB plu4008 aerobic respiration control sensor proteinchromosome CDS4693062 2346 - 0.428815
artI plu1587 Arginine-binding periplasmic protein 1 precursorchromosome CDS1893231 735 - 0.416327
baeR plu2778 two-component response regulatorchromosome CDS3296904 705 + 0.419858
baeS plu2777 two-component sensor kinasechromosome CDS3295519 1389 + 0.443485
barA plu0908 Sensor protein BarAchromosome CDS1043193 2328 - 0.418814
bolA plu3871 BolA proteinchromosome CDS4547952 315 - 0.419048
bvgR plu2285 Two-component response regulator BvgR proteinchromosome CDS2682765 627 - 0.427432
bvgS plu2284 Virulence sensor protein BvgS precursorchromosome CDS2679150 3612 - 0.456257
cheA plu1851 Chemotaxis protein cheAchromosome CDS2198280 2052 + 0.44883
cheB plu1856 Protein-glutamate methylesterase CheBchromosome CDS2205328 1053 + 0.453941
cheD plu1853 Methyl-accepting chemotaxis protein I (MCP-I) (Serine chemoreceptor protein)chromosome CDS2201059 1695 + 0.421239
cheR plu1855 Chemotaxis protein methyltransferasechromosome CDS2204448 888 + 0.434685
cheW plu1852 purine binding chemotaxis proteinchromosome CDS2200385 498 + 0.407631
cheY plu1857 Chemotaxis protein CheYchromosome CDS2206700 390 + 0.402564
cheZ plu1858 Chemotaxis protein CheZchromosome CDS2207099 651 + 0.463902
cpxA plu4795 Two-component sensor kinasechromosome CDS5567968 1371 + 0.468271
cpxP plu4793 periplasmic protein precursorchromosome CDS5566624 495 - 0.438384
cpxR plu4794 Two-component response regulatorchromosome CDS5567276 696 + 0.432471
crp plu0395 Catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)chromosome CDS426679 633 - 0.42812
csrA plu1251 carbon storage regulator homologchromosome CDS1448537 186 + 0.413978
cstA plu4522 Carbon starvation protein Achromosome CDS5279452 1803 + 0.475874
dksA plu0876 DnaK suppressor proteinchromosome CDS1003040 456 - 0.460526
envZ plu0213 osmolarity sensor proteinchromosome CDS219654 1332 + 0.436937
fecR plu4445 Protein fecRchromosome CDS5193561 966 + 0.503106
fnr plu2179 fumarate and nitrate reduction regulatory proteinchromosome CDS2564706 756 - 0.427249
glnE plu3969 glutamate-ammonia-ligase adenylyltransferase (glutamine-synthetase adenylyltransferase) (ATASE)chromosome CDS4653932 2871 - 0.460815
glnG plu0235 Nitrogen regulation proteinchromosome CDS247464 1473 - 0.480652
glnL plu0236 Nitrogen regulation proteinchromosome CDS248946 1050 - 0.475238
gltI plu1307 Glutamate/aspartate transport system permease protein GltIchromosome CDS1515851 894 - 0.423937
hnr plu2502 Hnr proteinchromosome CDS2946566 1026 - 0.384016
kdpD plu1417 sensor protein (histidine kinase)chromosome CDS1701169 2694 - 0.479584
kdpE plu1416 transcriptional regulatory protein of kdp operonchromosome CDS1700480 693 - 0.443001
lexA plu4374 LexA repressorchromosome CDS5106205 606 - 0.466997
luxS plu1253 Autoinducer-2 (AI-2) production protein LuxSchromosome CDS1451647 516 + 0.420543
narP plu2720 Nitrate/nitrite response regulator protein NarPchromosome CDS3228160 636 + 0.400943
ompR plu0212 Two-component response regulatorchromosome CDS218938 720 + 0.452778
phoB plu3911 phosphate regulon transcriptional regulatory proteinchromosome CDS4584924 690 - 0.446377
phoH plu2039 phosphate starvation-inducible proteinchromosome CDS2408512 789 + 0.425856
phoP plu2807 Two-component response regulator PhoPchromosome CDS3332475 669 + 0.45142
phoQ plu2808 Two-component sensor kinase PhoQchromosome CDS3333163 1464 + 0.416667
phoR plu3910 phosphate regulon sensor proteinchromosome CDS4583560 1341 - 0.422073
proQ plu2683 ProP effectorchromosome CDS3187350 720 - 0.466667
prpR plu3543 Propionate catabolism operon regulatory proteinchromosome CDS4174732 1668 + 0.470024
pspA plu2585 Phage shock protein Achromosome CDS3026971 675 - 0.454815
pspC plu2583 Phage shock protein Cchromosome CDS3026363 354 - 0.449153
pspF plu2586 Psp operon transcriptional activator PspFchromosome CDS3027809 1023 + 0.446725
ptsN plu4043 Nitrogen regulatory IIA protein (enzyme IIA-NTR) (phosphotransferase enzyme II, A component)chromosome CDS4731823 468 + 0.40812
ptsP plu0621 Phosphoenolpyruvate-protein phosphotransferase PtsP (Phosphotransferase system, enzyme I) (Enzyme I-Ntr)chromosome CDS706450 2247 + 0.457054
rcsB plu3048 capsular synthesis regulator component Bchromosome CDS3548772 654 + 0.405199
rcsC plu3049 sensor protein (capsular synthesis regulator component C)chromosome CDS3549510 2817 - 0.388356
relA plu0910 GTP pyrophosphokinasechromosome CDS1046932 2232 + 0.466398
rseA plu3345 Sigma-E factor negative regulatory proteinchromosome CDS3972699 651 - 0.443932
rseB plu3344 Sigma-E factor regulatory protein RseB precursorchromosome CDS3971737 957 - 0.430512
rseC plu3343 Sigma-E factor regulatory protein RseCchromosome CDS3971273 465 - 0.488172
sctW plu3766 Type III secretion control protein SctWchromosome CDS4433095 873 - 0.468499
sgcA plu1979 Putative phosphotransferase enzyme II, A component SgcAchromosome CDS2351773 444 + 0.418919
sixA plu3199 Phosphohistidine phosphatase SixA (RX6)chromosome CDS3763552 483 - 0.461698
spoT plu0272 guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) (penta-phosphate guanosine-3'-pyrophosphohydrolase)chromosome CDS288493 2118 - 0.500472
tctD plu3179 Two-component response regulatorchromosome CDS3740220 678 - 0.427729
tctE plu3178 Two-component sensor kinasechromosome CDS3738812 1422 - 0.422644
typA plu0238 GTPasechromosome CDS252018 1821 + 0.482153
uhpA plu0815 Two-component response regulator. Hexose phosphate transport system regulatory protein UhpA.chromosome CDS946347 633 - 0.473934
uhpB plu0814 Two-component sensor histidine kinase UhpB, phosphorylates UhpAchromosome CDS944806 1545 - 0.455663
uspA plu0121 universal stress protein Achromosome CDS126961 432 + 0.4375
uvrY plu2028 Transcription regulatorchromosome CDS2398840 666 - 0.414414
wzb plu3744 Low molecular weight protein-tyrosine-phosphatase Wzbchromosome CDS4417799 429 - 0.382284