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# Chlamydia muridarum Nigg, Nigg

>TC0237 conserved hypothetical protein
MSAPIPPAKDSKYVSALPPLEPLRTPPMAELLFGIYSLLLEAVEIRQQTV
LTQSQQLNDNTNIQQQLNQETNRIKYAVVNAGAKEDEITRVQNQNQNYSA
QRSNIQDQLVTARQNGQIILSHASTNINIMQQIAQMNSSFIKTLNSVGST
VNQLNKPLS
>TC0564 PTS system, IIA component
MSCISDHEPAFTLSSLLSSDLVAFLHSDTREDILFELSELAFKAGFLEDR
ESFFRALLARERIMSTGIGMGVAIPHGKIDGNADFFIALGIHSEGVLWDA
IDGLSVRLVFLIGGPSDAPSKYLKLLSALTQSLRDEARRSQLLQVQTVEE
VMSIFQESSYGFAIR
>TC0837 RsbW protein, putative
MYSRYTMTFSEGEHVFPAMLQELYTMLDFVKRAGFRCHCSKEKLLKLELA
CEEILVNIITHAYRSLPSPGWIRILCTETSNALLVRITDHGPAFNPITAS
PDIMRQDLPIEQRKIGGLGIFLAKHSVDVFDYERVNDMNVVTLTLYTQPQ
DQ
>TC0035 conserved hypothetical protein
MGIRLVVDKGPLSGTVLILENGTSWSLGSDGKASDILLQDEKLAPAQVRV
TLKDGEYYLENLDVSRPVLVNGVAITAPTLLKEGIPFVMGSCEWSFFKGE
EVEGDIELSFQTEENGGEAEQQAQGSSQVESKTNTGPRGHSSGASSADGV
SASAAEKEQKLAESFLASVEKGTGAVQEDSNREVSLQENQQAAPAKEKMN
LELPSVNQEQPKQATPSGSGELTQSQNVSMEENRPSPDQNQQPQLSSDSE
PDAKGAENQEQLSQSSSPSQENPKQSEDSSSATKESVATPEEKLPEAEGD
NSASSEEEKIEEESSEGESNEEQTVEAPAEEEKKEEKGEVLAPFNVQDLF
RFDQGIFPAEIEDLAQKQVAVDLTQPSRFLLKVLAGANIGAEFHLDSGRS
YIVGSDPQVADIVLSDMSISRQHAKIIIGNDSSVLIEDLGSKNGVIVEGR
KIEHQSTLSANQVVALGTTLFLLVDYAAPSDTVMATISSEDYGLFGRPQS
PEEIAARKEEEEEEKRKRATLPTGAFILTLFVGGLALLFGIGTASLFHTK
EVVSIDQVDLIHDIEHVIQQFPTVRFTFNKNNGQLFLIGHVKNSIDKSEL
LYKVDALPFVKSVDDNVIDDEAVWQEMNILLSKKPEFKGISMLSPEPGVF
VISGYLKTEEQAACLSDYLNLHFNYLSLLDNKVVIETQVIKALAGHLIQS
GFANVHVAFTNGEAVLTGYINNKDADKFRAVVQELQDIAGIRVVKNFVVL
LPAEEGVIDLNMRYPGRYRVTGFSKCGDISINVVVNGRILTRGDVLDGMT
VTSIQPHSIFLEREGLKYKIEYNK
>TC0791 conserved hypothetical protein
MYFTRDPVIETVITSREGYKLSIRNSKHLSQDPFVVEAVEVIRLGGTSFF
RNCDHSKPFLVPAADYEVMEVRDAKINLKAVGLDRGVKIVSGREALLKMP
RVAPVASVQEESSSSLEEGIIEDPVVATPSPASAAPMSKKEKRKEFKNEK
WKEKKKQGRRRNSKEIADAVGSSQDMIDTITEECLQESSPEERDPCERRF
ALIPPPTRLISEGPEEPKESQPVTAVDLNESLNALVSESCDVIESILADE
DTVIFTKESEKSSNETQELSSHSLEEASVHDRISSEE
>TC0687 conserved hypothetical protein
MKNKYEKENFMPLTDEEIADFKTRLLEMKAKLSHTLEGNAQEVKKPNEAT
GYSQHQADQGTDTFDRTISLEVTTKEYKLLRQIDRALEKIEESSYGICDV
SGEEIPLARLMAIPYATMTVKSQEKFEKGLLSGN
>TC0752 sensor histidine kinase
MPKIDTCDSCVSNDELLAIRARVTQSYSEAQTILTSIPDGIILLSEVGEI
LMCNSQARSILGIPEDIQLIHQKFHDFFPDTFFGFSVQEALEKEIPPKTI
RLTLSQDLSHKEVEVFVRKNISNQFLFLLIRDRSDYRQLEQAIEKYRSIS
ELGKIAATLAHEIRNPLTGISGFATILKEELSSERHQRMLNAIIEGSRSL
NSLVSSMLEYTKIQPLNLRSIDIQDFFSSLIPELSLTFPSCTFRRTYSSP
ILHSIDPDRLRCVIWNLVKNAVEASDDEVFLELHEKGLSVVNTGTLPLHV
QEKLFIPFFTTKPQGNGLGLAEAHKIMRLHGGDLIVSNQDNLITFTILWT
PA
>TC0910 conserved hypothetical protein
MSSMNTFNRINSISKDYMKIEDIFLSAPKNKTFFINHVMQFQKTEIERNA
IHKVLSLLDNDVQAQYEQLVTSLSSNTLATTAQPTKDSSAITYDPPSSNP
LYNAAKQAWAHNVLADFLNVVTEAKAKAATISQNETDLKALTNLSSVLTA
LVNKAKDGELSQENFETFYLLPDQIFSAIQSFPFEGNQKVLFSNQLLAAF
GEDGSIEQIFADIRIEGLQDVLNIVQSKLSPEEFESFQELQTVIDTLREY
VEPFDAEGFNTILQVSEALSVAIIKTSLPSNEKIELCRDIADFYKDQVLS
IQHLDTVLNETIYINARHNSLFAEIASLVAFIMGSFAPVGLNATSIEVTN
ASIAGALQAVRAIDARFHELSPDQQQLVNETVAKLNDFHGGEYIGAVWAY
FIAATTIASKNSVSPDEIKQVLTAQANTIASSFSLTQTLKTTINNIVAKN
GQFETVVDGVDRQYTIFSSDSNNQAVLNPILLNFGSIGFLPNITEAANTH
SETSARAFFRFKALAQTENAKLDATLQGSEDFLKKINQLRKDLFSYQLLA
QSHEIRSLPLPAAVASVLIDRYMPKEIDYLTQMKSDLYYSNLGSSVGNAM
IEAISQFVNGSTYFNFASFAGQQPMTGMHTDTFPGSQETAAAKLALEKQQ
TKLFIQYTNQALAVVQQQLARVKNDPVITNEQRLRILDALNSYADNLNSI
NGSLVLLQVYLNPLSVGVRDGNQGGGDTGKDPEGTFHVFGGQEQWQARLE
TLEDALVSGLPSNIINGGLFPVQATVQADQQAFADMGQNYQLEMQMHMTA
MQQEWTVVATSLQILNQIYLGLSRKFAG
>TC0707 anti-anti-sigma factor
MSNFQKEEQGQTGILHLQGKLDGVSSPAVQESISESLSNGMKNIILDCAA
LDYISSAGIRVLLQSYHQVGKNAGKIALTSISKTVEQTLYVTGFLSYFKV
FDSINEALQALEKENS
>TC0146 anti-anti-sigma factor
MEWIAREYNNIFIVSLKGDLDAVTVPALEEFLTKAIEKGRVNILLNMEKV
FYMSSAGLRLILSLAKLTKNHSGKLCICCLRDEVADIIRVAGLDKVISIR
KAEQESFSDF
>TC0044 serine/threonine-protein kinase
MLELGVSFPSKTKYLLTRELSRKVGLTVYQGVDESSSRPVVIKALVSPGI
HDQRFLRAFEEEARIMQLVDHPAFVRLEEKGEWEQGRYFVSEYILGHSLR
DIILSSHLALDKAVSIVLQVAQAITALHKHHVLHLDIKPENIMISRLGEV
KLIDYGLSAWQFNHWGSPAYMSPEQSRQEKLSPASDVYALALLAYELIMG
QLSLGKVYLSLLPVKISKVLTQALQPDPEARFPSMQEFATALQDYLMHDV
HEDYRKKDRVIMQFEQLQQQNMWLAPDKLCMPEGMALHIYSQKEPCDLHN
VYYDILRSEDIVELWFCYAQGHCSFALSMIKQFLNQRTEKAQDIPTVIKT
LDTLCKTMHIPLCEKGISCCCFIFFQQELMCFSCGKTDFSLKKQTRGVQR
FQAESQGIGEEGPLEIHKQSFLWEPGDELIVHTPRARDLVYLYCPSFLKL
QDRGQMDIFCQTDYLQKEVRQKYDGSLYPSTLISLKRVR
>TC0285 conserved hypothetical protein
MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKG
NRVRLRLAPHTDSSIIKELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRT
FVLDNVIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWVEIALP
KQCVFYVAKNFVKNVGALELYNQKEGQKKIALDLLNSAMSFADAELQKKV
EDIDLDAIYKKMNLAQAEEFKDVPGLQPLVQKALERVQEAFLAKSLEKGS
HKTVESYKPVETQAQLQPQRQVIEEKNVSVVPEAPVLSQVEEPKSVLTSS
SEVEPLQDVGPIKGSLLSHYIRKKGFVKTSPVVEGRESFERSLFEVWVNL
QPEEIRNGLTMESFYRDEQKKKRVLTGELEVYPHIVKNNPGDYLLKNGED
VVAFVYATSIDLSKWLGKRVVLECVSRPNNHFAFPAYIVLSIKEGA
>TC0563 PTS system, IIA component
MDLRLDELAVLLDVAEDSIRQWVSFEGIPSYKINDELRFNREEVEDWLIH
NHGVIVAEKDKRESKDLSLRYSLYRAIYRGGVLKNVLVDSKEEALQHTAK
YIANKFELDSGVLFEMLMHRESLMSTGIGEGIALPHAKDFLINIGYDIVV
PVFLSQSIEYGALDGKPVDTMFFLFANQDRHHLNLVNKIVHLGMSLEARL
FLKEHPDQPQLLAFIKNWEARIH
>TC0866 conserved hypothetical protein
MSKKHKPNKERSSSKSQVKPAHLSTKEAPALQELQDVIISFSQDLPLAQM
FSEMQDEKQLAKMMAALSGMLDSLPIETLTKGILNNPKEEAQLSQEISSI
FLGLRHLTEAVNKHIADEK
>TC0753 sigma-54 dependent response regulator
MSIEKILIIDDDPRILSLLSELLHAKGFSVSSATGVKQALKHILSQTFDL
IISDMNMPDGSGLDVIKYTKQNCPQTPILVITAFGTIENAVKAMRFGAFN
YLTKPFSPEALFTLISKAAELQSLQQENLFLQSQGSSLSHPLIAESLSMK
QLLDKARRAANSSANIFVHGESGCGKENLSFFIHKHSPRSTKPYIKVNCA
AIPDTLLESEFFGHEKGAFTGATTKKVGRFELAHQGTLLLDEITEIPIHL
QAKLLRAIQEQEFEHIGGTKTLPVNIRFLATSNRDLQEAMETKVLRQDLY
YRLSVISLHIPPLRDRKEDILPLSQYYLEKFCKLNNKPTKTLSLEAQQNF
LDYPWPGNVRELSNVLERTVILENDPIITPSMLSLLN
>TC0834 conserved hypothetical protein
MFMKKVVFIAAIFSSIVFWEKIPYSHRIKQFAMDYGVELVEKSSQLVRKI
SGNERLCVFERRISEEQVLAMFAKDKASAELLFVPHVLMRVRFSGEEDKR
AGSHEGAVLWSLSNGEMVLNTGSWTYSKGFRECLMLKAGKQDVQLMQILA
GMGGAAPKEVLSQALSMRNVRADRVIRACQKKKLIFTHDNLIYSHFQQPQ
PIKGCMTVFNSSPVWLAKPKGATVCSIVYPEDRIQNLVEMIFGDNFFILS
SEHIHVPVYKVSIAASDSSVRVEYINAITGKPFDFAPSHRK
>TC0506 cyclic nucleotide-binding protein, putative
MNLIDKAFLLKKTILFASLDMDVLLSIADKSEVMLFKASSEIFSEGQPSF
SLYVIAEGCVRIFAKEPTINVRLKPLDCFGEESFFSSRVREYSAEAITLV
KTLVLNKGQFLSIIEECPSVALALLELYSKQIVFRNQ
>TC0084 conserved hypothetical protein
MSIQPKSVSFTKNLVAPWAGEQVDSAAMYTSQAVFFFQQLDEKSKALKRA
LGLLEELDVEKFTPSLEETPTIIQPEITGRISYDDIEIIESLTPDIILAD
PDRASAQVFGEGLADSFDDWLTLSENGGLQDPTPVEQEIVTRYQTELNAL
RNKLKQSVLTPDEYARLYAIPQTFVKEIESIKDENNVRLIPKSKVTNFWQ
NIMLTYTSVTSLSEPVSDAMNTSIADYSLYIERATQAASLIREITNLIKD
IFNPIWDLSTQIITNAFSLNGAEFNSLEGGIIQSLLSFAGLFRQLMSRTS
TVDEIGDLYPQNVQNQDVIHTAIDEYVNSLTNLKVNDHVQLNGLLSLVYA
YGASTLVFTQKSISNSNQISLTEYSAALEKEIQYWVPRETANFKISDQAL
TTFKDKPSGTYNGVALFDFNGSAVNIFNPTFFFDVVSLMTTDPKKAMTRE
DYNRVIAASESSIRKINESIAAWEAAIAECNAKKVQMDPAGRNYFDAMVL
AKQTFVNTSPIQMVYASLMLDKYLPNQQYILETLGSQMTFSNKAARYLND
IIAHSVSFQTADVYYALGMYLRQMNVQAFPESISRAKNLLNKEIERCRAD
LFHCQRAIEEINKLSASVKADTELTSSQRSELLETLASYAFEFNNLYHNL
SNVYAMASVIQISGVDKPDEVDKAFTTTIGTKDLDTWIQQFTIFESAVIE
GGRGGVMPGGERQVLQSLESKQQDYTSFNQNQQLALQMESAAIQQEWTMV
AAALALMNQIFAKLIRRFK
>TC0919 transcriptional regulator
MAGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEY
ELLPKDIHAPKYFEANFVIVLLDVFDEEKCIDLLDRGFWFLVQPITPRLL
KAAIGAFLSQGSLHSVPESIQFGPNVFHILKLIVETPEGTIHLTPSESGI
LKRLLLNQGQLCLRKHLLEEIKNHSKEIVARNVDVHIASLRKKLGAYGNR
IVTVRGVGYLFSDDEEKNSSQEDTKLS
>TC0575 serine/threonine protein kinase
MQRYELIRLIGRGGMGEVYLAHDKACSRRVALKKIREDLSDNPLLRKRFL
REAKIAADLIHPGIVPVYSICSDGESVYYTMPYIEGFSLKHLLKSVWQKE
ILSKELEEKTSVKAFLPIFDKICATVEYIHSKGVLHRDLKPDNILLGLFG
EVVIVDWGAAIFKHAKELQQEKDEEGFSSYGQKNICYSSMTVPGKIVGTP
DYMAPESLLGAEASEKTDIYALGLILYQMLTLSFPYRRKKGRKLPYEDSI
LSPIEMAPYREIPPSLSQIAMKAIAVDPVQRFSSVQELRKALQPHLQGES
EWTTRDILSTKDRKNWKYYEPILLSRYFPVLASSPAQWYNFMLSDMEVNS
SVRVECSVTKSSVQEGVGIFFPPSKEADKGEFYCGYGLWFSSQNNELSVS
LIKNGIEIQKESQGIIPQQSRFAISIEKSNNKITVFVDQILFILHIDYLP
SLGERIEIIIQDLQGISNITILESIGALRVSCLAVPDAFLAEKLYDQAAR
FYRKIRDSFPGRKESYEAQFRLGVTLLTQIEEQGGDLMQALSTFDLLHGS
TGAPLEYLGKALVYQRNGSFVEEIRSLLLALKRYPQHPEIPRLKDHLCFR
LYDSLHKHRSEALVFMLLILWIAPEKIGLREEERFLEFLHHRQQSTLFCR
IDKTPLQFKSSKMELFLSFWTGFTLFLPELFQRARDLRDYQALIDIFYVV
CASGNKEVFSQFAEDLAIFVDEVVFPKSLHNQRGEELVLFVQGLAALQNR
EYRQAKEFISAVPFALQLYALDLFSLQAFIDEEVKVFSDFLQDIYNSASA
EDHKHVLVYMIQVSLWNQDLKQAYELLSKNFPQDKGLIEYSEAFVLWGCY
LALTGDRSAVKAHFSRCQFKYGRSALIGKCIDDDSLDYLEGLVWWEKKKT
LFQSYFLLRCLHAPKERYEVYRQAYISMENSFFG
>TC0283 PhoH-related protein
MKKTSVIDTSVFIYDPEALSSFSNTRIIVPFTVIEELESCAKFRDESGKN
ASRALSHIRLLLEQSEKPTTGQILLKNGSELCIEVSPLANLSNSEKQKKH
LTLELLQIISQREPVVFVTKSLGRRVHAEALGIESKDYENKCVSFRSLYR
GHRKLKVSNSKIEYFYKDGAIALPSDLSSPPSPNEYFFLSGDDETHSACG
RFSPNDQKIIALKPSPEKIWGVKPLNIEQRCALDLLLRDDIKLVTLMGQA
GSGKTILALAAAMYQVFENPKYNKLLVSRPIIPMGKDIGFLPGIKEEKLM
HWMQPIYDNMEFLFDVNHMGDFAETLHSLMETKKLEMEALTYIRGRSLPK
VFMIIDEAQNLTPHEVKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGL
TYLVGKFRHLPLYGHMFMTRTERSELAAAAATLL
>TC0660 amino acid ABC transporter, periplasmic amino acid-binding protein
MSMYIKRKKAWMTFLAIVCSFCLAGCSKESKDSVSEKFIVGTNATYPPFE
FVDERGETVGFDIDLAREISKKLGKKLEVREFAFDALVLNLKQHRIDAIM
AGVSITSSRLKEILMIPYYGEEIKSLVLVFKDGDSKSLPLDQYNSVAVQT
GTYQEEYLQSLPGVRIRSFDSTLEVLMEVLHSKSPIAVLEPSIAQVVLKD
FPTLTTETIDLPEDKWVLGYGIGVASDRPSLASDIEAAVQEIKKEGVLAE
LEQKWGLNG
>TC0877 regulatory protein, putative
MTIPIHENRYAMVSFTRTIGFRLWLICVAAIMFPLGINIFQLNLQQYKKT
LVSTTSDLRENALFKAHTLQQVIPLNVDILALFSEIFDLDRGVPSEPDLV
LSKEMEKIFHSTYKEISLVKKDADGNFTVVASSQIQQLGKNYNQEIFLSS
YQPFLATLRHSDGTSPVLSVLQTNIFDISSQEVLGILYTLSDTDYLLDGL
LASKNPRAIKTAILSKNGIILQATDSTLNLISIYKEVSQEQFCDVFLRKD
FCPPHLLLRSPLNLSPLPYGEGFVSFYIGDKEMWGYIHPLQDMDFCILTY
EEKTTIFASLWRRALLYFAYFCCVLLGSITAFLVAKRLSKPIRKLATVMI
ETRRNQHHPYEPDSLGFEINRLGEIFNSMVQSLSQQQSLAEKNYEIKQQA
QNALRLGEEAQQRLLPNQLPHYPTAEIAKAYIPAITVGGDFFDSFVIGEG
DQAKLFLIVADASGKGVNACAYSLFLKNMLHTFLSELSSIQEAVQQTSSL
FYKQTAESGMFVTLCIYCYHYATRQLEYYSCGHNPACLRMPNGEVSFLSH
PGMALGFLPEVPPHPAYTLTLEEESLLVLYTDGVTEANNKHGEMFGEERL
KTLIASLTKHSAEEAIQSIMLSIKSFVKDYQQHDDITLLVLKITKTDTAH
>TC0530 serine/threonine protein phosphatase, putative
MMIVAEFEYFGLSDVGLVRHNNEDFWQVNCASQIIAIADGMGGHLAGDVA
SYEAVCNLMELVDLHKVDLARLEDEQYKESIKTILSEVNLSIYRQGLSNE
QFKGMGTTLSCMQFRRGKAWLFHVGDCRVYRLRNKMLERLTEDHSLANHL
ASRYGLSKQNVKRYPGQHVLTNVLGRRPHVSPDIREMSYEKEDLFVFCSD
GLTSMVSDHDMLEILTQSTTLEEGGNILISLANSRGGRDNATVVLVRMR
>TC0773 amino acid ABC transporter, periplasmic amino acid-binding protein
MNMIRRSRRISEVRVKFKYLRPFSFLVLVVVAFCYGCSREKQEILVGRDP
TWFPQQFGIYTSGINAFVNDLVSEINYKEGLNISLVNQDWVHLFENLDDK
KTRGAFTSVFPSVEMLARYQFSDPILLTGPVLVVAENSPYQSLQDLEGKL
IGVYKFDSSALIVQNIPGAVINSYQHIPIALEALSTQRYDALLVPVIEAT
ALVETAYKGRLRIASEPLNEEGLRLVILRGGGADSLLEGFNAGLAKTRRS
GRYKAIKMQSRLP