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# Nitrosomonas europaea ATCC 19718, ATCC 19718

>NE0343 Sensory transduction histidine kinases
MKSGFSHPLGLRQRLLLWILLPLIAVFIGSILFDYRLAQETADTAYDHSL
NNAALDIAAYIQTVGLSPKLRLTPEAEAMLRHDAVDKIFFAVRDSNKQLL
IGDAQLPAYPGAIHKRPVFIDDVYQGEKIRATTQLIMVDANEITITVAET
MREREHASNRILAATIIPNLIIIAATLLVIYFGVRRGLAPLVHVENQIAS
RSPRDLRALDIGHAPREIRPMLTRLNELFESLRTAAAAQQRFLADAAHQL
RTPLAGLQTQIELVAAEGKYVRNDERLARIEEAAERIAHLVTQLLIYAQT
EPAASANQTFHPVALHELAESAASTFIDRALAKDIDLGFEIQPAVAEGIA
WMLREALGNLIDNALRYCPAGSTITVRSGVHSSRPCLAVEDNGPGIPPEE
HKKVFERFYRIPGSISGGCGLGLPIVQEIAHLHAATITFSRPANSGLTVT
LTFPENHRENT
>NE0666 Sensory transduction histidine kinases
MKLHIPRTTFGLAVMVSVVLTALAVLSGLVGRYFAHEELEQQLDHRITTE
SSLLIEEYDRGGLAALAAMVDSHHDRHENSGLGYLLVDHQGRRLAGSLQA
EAPSKAGWREHLYVGNKTTGDRRAHQALTVILPAGERLVVAADRMPVEEI
DAVIGWITAGMTSVMLMMGIGSAWILGLITRQRIDNISKVANAIAAGDLS
RRIDRNNRAGEFDRLAETLNRMLDRNAELLTNLKQISTDIAHDLLTPLGR
LQQQLELALTDCRNTQDYRHTIERAIATAVEIQQLFSSLLKISEIESLTL
RKTFTPVSLTEVAKRVTDAFRPDIEENGRKLIVRLDHDLHILGERHLLSQ
LLVNLIENAMRHTPVGTTISVILSRAADHTILTVEDDGPGIPVADRARVI
ERFVRLEASRSTKGHGLGLSLVKAIATAHEAELIMEDNAPGLCIRLSFTA
LPIRDRKEATKV
>NE0558 putative transcriptional regulator, putative
MLTSPHVFLLTDSYQMYSDDDRNHSGKEALDWFVRMQSDSVTEAERAAFI
AWRDAKPENAQAYADTELLSHKLAALKGHSAYHIPRLTPDQKPSLMTMQS
FNRIALFLLIIFSSAGLWWQTGIVSDEYVTSAGEQRHIPLEDGSKLELNT
ASHADVRYTRLERIVTLYSGEAYFDIADENYRRFVVLAGGLQVRDIGTRF
IVRHDNEQVTVTVLEGEVELTRPALSDRSGELPATLTLLAGQQSHYRNEV
ITSAIPIDSVAAAAWREGKLIFKATPLREVVQELARYHPLRFVIHDPALA
DETVTGSFHIGELSSFLRALEQVLQIQIDTRNPDIASIQRRKN
>NE0979 putative transmembrane sensor
MPQEPESGADLPSDRTAVFPTPEGPPLPKQVTLQAAKWLVMLQAPNTTQA
TRAKWQQWRDVHPDHERAWQHIEASATQMRAMHSPLAHGTLIRDDTEKRH
ARRRAIKLLGVIAFTGTSTWLLRDNPVWREWHADHRTATSERRTIVLADG
TRIMLNTASIIDVHFDNAIRLVTLIRGEILVTTAPDSASGTGQPFIVETD
QGRLRALGTRFAVRQRENDSHVSLFEGMVEIRPADASDQARVLQAGEQIS
FTRNAIETPQTIDTHAASWVTGMLVVQEMPLTDFIDELARYRPGYLSCDP
ELSHLKVSGIYPIEDTERVLDMLLHVHPIEIYSLTRYWVAIRARGDR
>NE1181 PemK-like protein
MTDFKQRDIYWIDLEPTKGAETRKLRPCVIIQSDLVNVQSRTVIVAPLLL
QHKPWPFAVNLEPTEKNGLDKDRHINLKQLRAVDISRIGKKQGRLENRYK
DPIKAALMIIFDL
>NE1864 HAMP domain:Bacterial chemotaxis sensory transducer
MLQNMTIKSRLIFIVGLLSLALISVGSVGLYGLYQSKTKLETIYQDRVVV
LGHFSQILDSLLQVRMYALLVTNLRDTGVARQRAAQVVDEDAKINELWRK
FTQTYMTPEEQSLAGRFTEQWKVYQAARNQTLNHAINGNFDAAVEVTLQD
AGPKYEAVHGSLMQLIGLQESVTAQEYEQLQAMTSIIFATTITLTVLGIL
LAGGVGFVLIRGVSRSINQAMEVADGIANGRLDQRIEVTGRDEISRLLQS
MTKMVEVLNGFMSAQQKMSQQHDAGAISYRIPASQFPGSYGEIANSINEL
VKAHIAVKMRVVEVVARYAQGDLSVDMDRLPGEKAKVTETMDKVKASLQA
INGEIKYLVEGATAGDFSRRGKADKYQHDFHAMVSNLNQLMQTCETSLED
VIRIMDALAEGDLTQKITREYQGMFATMKDDANITVGQLASIVRQIKDAT
GLISTASKEIADGNSDLSQRTEEQAANLEETAASMEELTSTVKQNADNAR
QANQLAASASDVAVKGGEVVSQVVQTMSAINDSSKKIVDIISVIDGIAFQ
TNILALNAAVEAARAGEQGRGFAVVATEVRTLAQRSAAAAREIKELISNS
VHKVEDGTQLVDQAGRTMEEVVLSVKRVTDIMGEISAASQEQSLGIEQVN
QAISQMDEITQQNAALVEEAAAASESMREQADQLSRAVAAFKLEHGMAAA
HTDSQPFVERRGPNRATNVERLPQQVKGHRKTASPGASSSIPTGTDGDWE
EF
>NE1863 probable chemotaxis transducer
MRVNMPVTNVEREMRDGEFLVSKTTAKGVITYINEPFIRMSGFTEQELVG
QAHNIIRHPDMPPEAFADFWNTLKRGRPWSGMVKNRSKDGSCYWVYANVT
PIREHGKVTGHMSVRSKPTRDQIQAAETLYRQMREGTAKVQIVAGEIVAN
SWLGSLREKFRHLSLKTRITGFGAVPLLVMAGSAWLMMQGQLNLAFAGMG
LSVCLAGGMGVLLYRCIRQPVDTMIHHLDKMAQGDYTSQILLERNDEIGR
LTEALKSMQIRAGIDFTETKRMNIENLRVRNALDIATSAVMIADNTGTII
FMNRMVQEILVNEANEVDVCESLQSRLRDLAGQQQIDNVRIGERTYSLLL
MPVTSESGERAGAVVEWRDRTQELTVEKEVMEIVQAGVAGDFSKRLVLAG
KEGFFRQLAEGINRLMESTSQGLDEMATMLEALAQGNLTMHITHDYQGML
GKLKDDSNSTVDQLASIVRQIKDAAGLITTASKEIADGNTDLSQRTEQQA
ANLEKTAASMEELTSTVKQNADNARQANQLAASASDVAVKGGEVVSQVVQ
TMSAINDSSKKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV
ATEVRTLAQRSAAAAREIKGLISNSVHKVEDGTQLVDQAGRTMEEVVLSV
KRVTDIMGEISAASHEQSLGIEQVNQAISQMDEITQQNAALVEEAAAASE
SMREQAEQLSRAVAAFKLEHGMAAAHTDNPPSVERRSPNRATNVERLPQT
RNRKKAATRSSVASVSAGTEGGWEEF
>NE0729 possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
MNPSFQARILILEDNASLVANLFAYLEPRGYLLDAAQDGLAGLTLAQQGN
YHALIIDWGLPTKEGVDVIRALRARDCHIPILMLTARDDLDDKISGFRAG
ADDYLIKPFAFAELEVRIEALLARSRGRRRKLTVGDLSFDLDTQHIWRGS
RQIQLSASERRLLEVLMRASPSVVSRPELEETLWGDEPPEGNVLRSHMYE
LRRAVDGEQEEKLLHTLRCVGYRLAVQEQN
>NE1085 putative transmembrane sensor
MPDTEEIARDSVVPPDVRRQAVNWLVELQSDIVTDETRDQWQKWRMSHPD
HEYAWQQVEVFSRKLRGLPSPLAHAALTPPHSSSRRRAIKALTVLIFLGG
GTWVAGEGRLWCWWPEDYCTGIGEHRAVTLSDGTGIELNSGSAITVNFDD
TRRLIRLMNGEIMVTTAPDPRLANGIGAARPLLIETAQGILRAIGTRFTV
RQFDVSQQGKSSVAVFEGAVEIQPITGRLRQLEVGQQAAFTRDGVIAVGM
ACEADTAWRQGMIVARDMPLIDFLAELGRHRSGWLSCDPAVAQLKVTGTY
PLADIGKILAILQKTLPIDVQLFTRYWIRVGARQEDT
>NE0913 BolA-like protein
MTTMKNRIENSLQSLQPQFLEVINESYRHAVPEGSESHFKVTIVSDAFDG
KTLVARHRLVNTTLTQEIIRSIHALALHTLTPAEWQARNETARESPPCLG
GSIAEKRAGAGKK
>NE0286 conserved hypothetical protein
MTLPDSKKDQTARHVAILQESYRHYTGRYLFDPKLGASEAIVWLEQAPFA
LVSHGTQPDPIFNYGNQTALQLFGMTWDEFTRMPSRLSAEPVDRAERTRL
LDHVSRDGYIDDYTGVRIAADGRRFLIRHATVWNLLDESGRFYGQAAMIP
EWEVLQPVFTAD
>NE0787 hypothetical protein
MDHDKSKRLPPSYYTLLEASQEKETTSTKILAQYLDRSPATVRTQFQRIM
EFLDVSSRYGALREAEKRGLIRRNKRATSAHHQENRSSL
>NE0127 putative transmembrane sensor
MHLDNEADHHSENKAEAPGIQPAVTRNVADISPQIAQCAVEWLVELQAAD
HDEATHEAFQRWLAAHPDHKLAWQHIETVNTRFNGLTSPLGSAVAKAVLT
PRRSLKRRQIIKTLVVILFAGSTGWWADEKIPWRAWTADERTHIGQRRNI
TLADGSRVVLNTDTAINIRFTANERRLQLVRGEILVTTNQDSASIVRPFI
VEIAQSELRPLGTRFTIHQQTTSNRLSVFEGAVEIRLRQDINYRHIVQAG
EQVDFSNQGIHEIHPADDTSTAWSNGMIIASSMRLADFLAELDRHRPGKL
NCDPAVADLRVSGTYPLTDPEDILDALQTTLPVKIQYFTRYWVTVRPAS
>NE0080 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)
MPYGKLRLLIAGHSKADVEQLSADFGRNGVQLIYQHVNSLSDIQSALNTS
SWDAIITEHSMAGFDTMQALDLMKACHQTIPFILYTAVTDEQAILPLLHN
GANGCVTKGHSMQLMLAISRELEYLDLKRRKRQADSHIYRMTYYDELTGL
PKHNLFREKAVSLLPDNAINGDMIAAVYFIDVNRLSRINSKYGYSISDNL
IQQLASRLSIYSDKTGILARIEGSNFVFLKTGLTGADQAQILANQLLKLA
TAPFIINNLEFYITLNIGISLYPRDGRDIETLLANAENALFSTKRSWPNT
YKFYTAEMGEALSQKTRIEQSLQHTLNDREFILHYQPIIDLKTDSIVGAE
ALVRWQHPELGLLSPDKFVSLATESGSIIKIGKRVLHEACRQAKCWQDSN
HGPAFVTVNISAIELDQLQLIKHVAEALQITGLDPARLELEISESVLMQD
IDGSIRILNKLKEMGIRVVMDNFGTGYSSLNYLRRLPVDTIKIGQPLVQD
IASQSDTSVIITAIVTLARNLGMQIRAGNVQSRTQLDFLQKANCHHVQGF
LFSPPVSAENLLPLIEQCKTGTFA
>NE0848 Phosphoglycerate mutase family
MDLILWRHAEAEDGIPDATRKLTEKGLKQAQKMARWLEPKLPKDTRIIVS
PATRTQQTVSALTHHFETSEQVGTSATPHRVLNTIAWPEAEGTVLVVGHQ
PTLGKIASLLLKGDESGFSVRKGSIWWFSSKQKDERESIILRAVMTPEIL
>NE1376 hypothetical protein
MGLLLYRELVHKLKTKYKKIAGKGENQKDKTLPWHLETDQLTNRHPNHKV
RIPYIDEVFDMLAKMTAKNQLTLPKSVTTAVGAGEYFEIEVRNGQIVLTP
VRIQRADAVRAKLAELDLGERDIMDAVTWARQPVKGSATE
>NE0514 possible baeR; Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
MSRILIVEDEPRLARLEADYLQHAGFQTHCLSQGLEVIPWLKENTVELIL
LDLMVPGRDGLDICRDIRSFSQVPVIIVTARIEEIDRLLGLEMGADDYIC
KPFSPREMVARVKAVLRRLQPPAPNSAQQALTLSPQSFKVQYDGREIELT
AVEFQLLYTLYQQPGRIFSRARLMDLIYQDQRIVSDRTIDSHIKKLRKKI
AELIPEKEVICSVYGAGYRYDPQSVEPEE
>NE0542 possible transmembrane sensor
MHLSNSPNSHDPDAQARFWFARQQGQTLSEAEQQQLAEWLAANPLHQDAW
RRVEEDWLAIDRYRHALNDELKKARRNRPGQHKAAFQLKRRAAAAALLVA
VCIPVLYQGMTGTTTYWNTLKGEQQQITLAGGSTLNLDTATRITVTQNWF
THHVQLHEGEIYLETASSDWHTLRVSAEHYEIRDIGTRFSVRYIPDQFMV
EVAEGTVEVKKQGQLVLLQAGEVLSIITGSNEWRLAALPAGDIAHWRKGL
LVFNAHRLHDVLHEIARYHTVQFDLADSAIGEIQVSGRFKLDELDTNLQI
IADTLKINIEHPAPGRYRLGALRQSTR
>NE0090 Guanylate cyclase:TPR repeat:SAM domain (Sterile alpha motif)
MMNDRVSAWLDSLGLTVYHESFEHNAITWDVLPELNEDDLEALGVLLGHR
KILLRAIAQLSQNTASPGPGSILAGVIPEEQSFPLERNQAERRQLTVMFC
DLVDSTALSCRLDPEDLQDVIRQFLVACSQAIGRLNGYVAKYMGDGILAY
FGYPHAHENDAERAVHAGLAILDTVKVFNLNNPHPQLSIAARIGIATGQV
VVGELMGQDTATERSVFGETPNLAARLQALAKPGQLIIDLATKRLVGNEF
EFSDLGASSLKGFDTPVHAWQVLSIKPSASRFESYRSGQLTKFVGREQEI
SLLLGRWHEAVSGEGQVVLLSGEAGIGKSRIACSLRDHLADERHQVIQFQ
CSPYHINTALYPVINFLRQAAGFANQDSAETQLNKLDAMAAKSGIDDPKT
VSLLADLLLIRGDHRYPPLNVSSEKRKDMTLEALVQHLQKLAGHCPLLFI
VEDAHWLDPTTLELITRIIGHIRQMRMLLLITSRPGFKPVWAEYSYVTSL
TLSRLPRRHSAELITTMAGGKVLPPEVQQAILAKADGIPLYIETLTENVL
GSGLLTEGNDSFTLQGPVKKLPIPDSLQALLMERVDRLGSAREIVQAGAA
IGREFTYELLQATVEVPDSELKDALDLFVASGLVLQEGEIPLATYYFKHA
LVQEAAYSMLPRKLRRALHARIAKALESRFSERVSMEPELLAYHYEQAGL
AGPAVEYYHRAARCDVERSASIEALNHFNRALELLKELPQGPERDTLELE
LLIARGVPLLSVKGYASDEMEHNYRRAKDLLQEHSSFVHQFRAIRGLWVF
HLVRGQLANARGLAEDLLALARREQSPELLIEAHHALGATCFYLGQFDEA
RTHLFAAKSLDDSNQHDSQVFFYGQDSGITARILLARTLWILGEVDQAET
LALETMGMARELEHPFTRVFTLIFLAWIYSGAHNAEKTLEITNEAIAIST
QYSFELGLAWATASQGWALADTGQEEGIAKLIDGLSATRATGARIHDSCT
LALLAEVYLRRNRIDEGLAAIEEAQKLAVTGGALFWQAELFRLKGELLQE
QSGESVQEAEECLCEALKIAQDQHATMLELRAATSLAKLWRKLNKIDNAK
YILNDVYFRFSECTDNLDLIEAKTVLEQLGV
>NE2330 hypothetical protein
MVTRGEIVRNKVSELMDGELDGTHAAKIINAVKTDNDLFSDWKIYHAIGD
SLRQSAVNIDISEQVRNQLADEPLLLSPYPHKTHQNRKQKLLGLSVAASV
AALSIGWLISQSMEQHETTLKEIYVAEKNNGKTAPVGGPRSLMTFQPVSA
YSSPSMPVNTHYNNDPLIYRDLTYERSVRYPATGISSPAEVVGEQSAASA
E
>NE1700 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)
MRVLYIDDNFSDADIVRRTLARTTPEIDLTTVASLAECLVCLEKSVHYDV
LLTDLDLPDGSGLEVLRYIREWRLPLAVVIMTGPGEHDRGGAAFKAGADG
YLVREGDYLERLPRTLHSALVRFRTNGTERNSPLSRVLYVGHSRSDIDLM
RHHLAQHAPHLHLTAMTSAQDALALLPVNPDQTADFDIVLVDYCLSGGMD
GLEFIRLLREERKLDIPIVLITRQGSEMIAARALHLGVEDYLSRHEGYLF
EVPATLEKARWLAELTRERINLKQTNLRLSHLLAASPMVLYNLRFTGNVL
QPVWVSENIERLIGYTPGEALAPGWWLSHLYPDDREQVLERQPILLSDGQ
LTHDYRFYHRDGRIIWILDELRLIRNADGQPHEVVGTWLDISEHKQAELI
RQAHQSALNLIVASQPLPVILSDIAKHLETINPDMLVSILLLDKQAKCLK
LGAAPSLPDDFNATVDQLAIGEGVGSCGTAAWRGEAVIVSDIDHHPYWQP
YLEFTQKADLHACWSVPFKDENESVLGTFAIYHRTVREPTSADLVLVEEF
ASFTALAVQKVYAAEALRLAATVFESIREGIVVTDLEPRIVAVNRAYTEI
TGYSAAQVVGKNPKIIRSGRHDKSFYQAMWSSLQEEGYWSGEIWNRRKNG
EIYPQWLTISAVSISSASNGRKELCNYVGVFTDISQIKQSEAQLAHLAHY
DPLTGLPNRLLVQSRLHHAVERAQRYNLRVATLYIDLDRFKNVNDSLGHP
IGDELLIKLTERLKNRLREEDALARLGGDEFLLVMEDVKDPSESAIVAQT
LIDLLATPFVLPSGHEIFINASIGISLFPDDASNATELIQHADMAMYQAK
KEGRNTYRYHTEALSIAANERLIMENRLRHALAAGEFILHYQPLIDARAG
HVIGVEALARWQPPDNTIVPPGKFIPIAEETGLIVPLGEWVLRTACEQGR
AWIDTGLPPLVMAVNLSVRQFQSENLVELVQRILEETRLPAVCLELELTE
SMFMEHAERSIETLNRLKALGIQLAIDDFGTGYSSLTYLKRFPIDKLKID
QSFVRGLAHDPNDREIAATIIAMARGLKLGVLAEGIESEQQLDFLRQQGC
DYYQGFLFHRPVPAIELEAWLREHSAPR
>NE2386 Bacterial SH3 domain homologue
MNKITYFLAASMFFVFLWGVPLTARAEKSYASDQVEVLMRTGPSQQHAIV
RMLKSGVALEVLERDQNKGYSRVRTTGGTEGWVLSRYLMAEPAARELLEK
LSSDFSGSDSRPDSIRAQADLVRHELGMQKKQAETLEKDNKRLEAELSKI
RQLSANAVQLNGENQEMRQQVADLKMKLGELEQENHALSGQIEREWFYAG
ALVLFAGLFLGLVIPRIQWRKRSRYNDF
>NE1846 HD domain
MNRCIIDYKTIKSAQPEIISRIIEINEESPNCFREMDHLLRSDQVVASFI
LRVANSPIYNRSQPIRTLPIAISLLGINIIRSLVILAFSRSVFSKSKNAL
VCKHIWHHSLLTAIASYNICSELGKAEDCEEAFVAGLVHDIGKVLLFTHV
RKDYMDALTYALENACSSKEAEQKFMGTDHYQIGEQAVREWKLPPQFQLY
VGTDLDQLLPGQIDNEILLWLAIANSLIKGAGIGTNPCDPVIRKEKLMAY
GLNEEFSDHLLDEAFFQKLINDEIFQFCAHDRC
>NE1313 Response regulator receiver domain:Helix-turn-helix Fis-type
MDRPSLLIVDDDETFCEVLARAMVKRGFDTTCMHDIKTALEQAEVLMPEY
AIIDLKLGNESGLLLVEKIRELDPGTRIIVLTGYASIATAVEAIKLGATH
YLAKPVDADDIMAAFERTSGDTETPISPHPLSVERLEWEYIHRILMENDN
NVSVTAKVLNMHRRTLQRKLSKKPAQL
>NE0512 conserved hypothetical protein
MNKKLIGIVLALAFPLAVTANPGEHKHDHEQYRAKKIERLDKELSLTDDQ
KSRIDTLFKQNGEKFKAIREETQSQLKTILTPEQYSKLQELKQRRQEQWH
KKHQEKLQERKQEQSGTTQ
>NE0440 Domain of unknown function, DUF9
MKENLLEQLRFCTNLPSLPSIVLKIIDLAGNADTSLTQINHYISLDPALA
AKIIKTANSPLYKSRYPVSNISQATGILGTYGVTTIALSFSLADSLVKQS
GKKLGMAGSNIFWRRSITSALASRALGERLGMSRMLDDLFLAGLLQDIGI
LAFHALLPEDYPSVFSLADNHNALLAAERETFGVGHDELGAALLEYWKFP
GYVPAACRYSHTAPGKPNAGINECVATSGYVTDYFLSQDRKEKIGEVTRI
AEAYLGLDEHALIEVLEAMQNELQHVEDLFEITILNPAHLSSIVTEAREL
LIVHATIKVRELGDKIRHDGLTGAHNRAFFDETFQNEFQLSIQQGSPLSL
AMIDIDNYKTFNDTYGHVAGDGVLVTIARAITEQIRQTDILCRYGGDEFA
LILPGTTLSAARHTLTRIMESIAAIAYKPNEVNTIRITTSIGLAVNMDKE
KSFSTHREMLEAADRALYAAKHAGRNRIAEWNPSLTSLLKS
>NE0817 putative transmembrane sensor
MNRKHSDIPAHPRDAAAYWFARVHSGSFTQSDQEAFDSWLQADDLNRKEY
QALDKIWQVAGQISAHELRAMLAEEPEPPQQIQKRLKRWRLTISAVAATI
IIVIGFAGLFMPYGWLGEPFYTAEYVTDRGERRTEVLPDGSILEINTQTT
ALVEYFENRRNVRLAGGEIMFSVETDAARPFTVDAGSGTVLVTGTRFNVL
RDQDQVQIAVESGSVEISSGHWWNRRTEQLTDGLGAQIDPDSMTPASPAD
IDTLTAWRQGKIIFKDQPLASVVKEMNRYLPQPITITDHRLDQVRIAGVF
NTGDSAAFLQALHKSIPVQVILHADGSTELSLPR
>NE1408 Sensory transduction histidine kinases
MMSLNKRVLLSAALVLLVFIAGITLTLDRAFYDSARIGVKDRLFARLLML
LGDTEVDESGELEIPTNLLDAEFGHVNSDIYAFVTGPANTIVWRSTSSLN
KPIPGITLLEKGKQEFEQITLDEEPYFIYRYSVAWETSSGNYPLIFNVMT
DTALLEAQIERYREDLWGWLGLMAVFLLATQMLVLRWGLLPLRTVSTELA
AIESGRQESLKDRYPKELKLLTDSINSLITHEHKQQKRYRNGLADLAHSL
KTPLAVLQGAIHGGNDEAARLKTIQEQIDRMDNTIQYQLRRAATAGSSPG
MRLIPLRSMADRIINTITRVYRDKRPHITVKIDDSMNLRIDEGDLMELLG
NLIDNAFKWCHHSIHLSAGYQEDQVVIQVRDDGPGISPHEIARILERGVR
ADQSIPGHGIGLAIVRDIMQVYGGELLISNNPDGGLSVTLRFEKSK
>NE0728 Sensory transduction histidine kinases
MATKSLRRQIMLGMLAYTLLLSLGIATYGVTVIKNVEHLIWESLLRSEFE
YFLECQRTEAGYRWDDTELLRLFGKGSDTPIPAEFDLPAGVHDGISVEKK
QFVVLASGIGPDRSVMTLDITNIERVERQLIWMILGSAAVLVCILVLVTI
FGARRLVRPLNSLARAIAELSPDQNGQRVQIEPHAPKEAQVIAERLNSYL
VQIDDFVERERKFIRMASHELRTPLAVVVSTAEVALDPLVSPHSTEAHLR
RILATAHEMQNLVTLLLALARDPARLQSMMELVDLAELVPSIVQDHRLLA
GSKELAFDIITTPPCSIHAPRQIVSATIGNLVRNAIENSEHGTIRVITTG
SGVTVQDSGHGVSESERSRIYTQLARAGSAAAGGIGLELIARACAHLGWR
LDIDSLESGGTKATLTFR
>NE1070 putative transmembrane sensor
MTVLHSPEPDIDPAILLEAADWLVLLQSGEATERDRMALAHWRERNPAHE
AAWRRAENMLSTFDQVPPKLGHDTFSHLGNPGRRQMLRLGLLALAMPAAW
ITWRHSPWQEWVADLRTATGEQKLIDLNDGTHLVLNTTSAANVAFTTAER
RLILLAGEILVTTGRDPSPVSRPFIVQTAHGSLRALGTRFTVRHFDDRTQ
VAVLEGAVEVHPAVSIQTTVLRAGEQMTFTGLDMQPVRPVEASTTLWEHG
MLLARDMHLGELIAELNRYHRGVLRCDPSVASLAISGAFPVTDIPASLAL
LETTLPIRISSTTSWWITVQAR
>NE0579 Domain of unknown function 2
MNRTTAKPFTVMDEFELIKAATDYSLEQDENGRISGNFYHCKLTSAFQVI
LDIHENNIIGHAAYIRSESNGEVSLWPWQVFALASKDEQLIDLDRLCRAI
HALNYFKKNFDTNTGQLFLSVHPRLLSSIQNEHGRTFKDFLDLTGISTSR
IVIEIPPALNHDWKLLQKLIINYRSYGYQIALNFSSTNGHWLLGTDDLHP
DILIVQAHELLHYQLNDYPEDNSTRDAGFRLHVRKIETQEQLTAAKQAGA
HYLQGNFLGKTV
>NE0555 possible transmembrane sensor
MEQDQQAGHPSEENALTEQAAAWFLRMQQSDTNDVEQKAFEAWLAENEAH
RTEYQQYVQLWQTLDHLEQKPRKKSRSTVTWIVTLAILFSSLHWLTRHEE
MITTAIGEHQQIILADGTTIDINTDSTLRLALYGFTRKVTLERGEALFRI
GDERLRSFEVHAGNGILRDIGTEFNVIKEEGNVTVAVLEGAVEVGIDHQN
DTVRLLHGGEQLTYSAYDLSEISSTDKETVTAWRKSRLIFRETPLEEVIR
QINRYHSRPVRLGDPQLNTLRVSGEFNSADRAGLVQALITLLPLRASELD
SVTLLTYEK
>NE1374 conserved hypothetical protein
MQVSKWGNSLAVRLPASVVEILDLKEGDSIEIHVAGARDIEIMKTPEARE
ILERLRKYRGRLPKDFKFDRLEAHERS
>NE1975 NtrX; nitrogen assimilation regulatory protein
MANNTILVVDDELGIRELLSEILGDEGYNVALAENAEQARNYRSQTRPDL
VLLDIWMPDTDGITLLKDWANNGLLTMPVVMMSGHGTIDTAVEATRVGAV
GYLEKPIPLQKLLNTVGQVMRGGKQHKFSPTLSLSNLGHSGLITELRKKL
EQVENLKIPVLLTGEPGVGVEHCARFLHRPNTAWIVPESCSFLAESPLTQ
LEQAKGGLLFLGEVGDLSKLEQKGLLLLLGKLEQYGVRLVCATIRPLAEL
TAQGTYHPRLFEILSNLCITIPPLRAHREDVPEMASQLLSGWIESGEIPL
MHFSTAALNALRNYDWPGNLAQLTSIVHSLALTCTGDEISVDAVQQALTL
SSREAVSVVSDIPLNISLREARDIFEKNYFEKLIEQEGGNMTRVAERAGL
ERTHLYRKIKTLGIKPRSQNY
>NE1506 Universal stress protein (Usp)
MYQKILVPVDGSITSNSALQEAVKLAKRLDACLELVYVYEDAIYLVDENY
FNYEELQKTIHSSSEKILAEAAAVVSASGIPVETRLVQSNNERIASLLVK
EAERWQAELIVIGTHGHSGFSRLLLGSVAEGVVRMASIPVLLIRGARD
>NE0377 Sensory transduction histidine kinases
MTTLSYAAAAAAFFFLSILLITSWRGRLYGLLLAAACLSSSIWAATIAGL
SYLDYAYPLLIQVLELLRNATLTIFLITLLGPFQPGKTDNTSPKIRPAVA
AIALFYLICLAQIVVFGQTTGIDPDQPGASRDFLIWVAMAIIGMILVEQY
YRNTPREQRWGTKFICLGIGGLFVYDFYLYSDALLFRKISADIWVARGWV
NTLIVPLIALSAARNPKWTVGIAVSRRILFYSSALFGAAVYLLLMAAAGY
YLRFSGGTWGTIFQLTFLFGAIILLIVVLFSGTTRSWLKVFISKHFFSYN
YDYREEWLRFTRTLSEEETELRVRVIKSLAQLVESPAGGVWFKSEQHHAY
LPIARWNIPHIDASVAIDSYFCQFMQESSWVIDLYQHDSESQKYAAMILP
DWLPTIPKARWVVPLILHGELLGFVVLTEPRSAVEFNWEVRDLLKVAGRQ
AASYLAQYEAAQALSTARQFESFNRMSTFIVHDIKNLIAQLSLLLTNAEK
HKDNPEFQQDMLDTVALSVNKMKRMLEKLSSENIREEKNALSLNELLQRI
IASKSFYEPQPVLDILDTELNVLADLSRLERVLGHLVQNAIEATPKDGYV
EVRLKQQPGWAVIEIEDSGHGMSEQFIREKLFTPFESTKTAGMGIGVFES
REYVEEIGGKLHVSSEVSKGTIFTVMLPLVSPP
>NE1847 Guanylate cyclase
MKSFSSAPMIAVDPPSGTSSNKIESHSPGHGRPIIVTSIEHNVWQELEQE
IVCSLKRLQCPRLLDSTVLLLHKLITNIVRTMHRHAFQRAIEDDLNIDIA
SKDNVFDELLQNELITHGDRNIEQFCRKNHFQVILTFPEEKGTLIRIEYP
ENCDNSAYLDSKLAKAIGFTLLKQIDGTTAPGYHSAKVVRDIARHHPHLE
QAEHSELLLSAEESDKTQAIFCKLNYGIIVFSSAGDILSISPAILNNLKL
EVSPTSVHILTGIIPGHFYNDVLWGLALESQGGVFENYRIRVRLPHDNSL
SLLFNISGYRHHDMTIHTLWQVVSLDHKATHTLAEGSILNEARVHNITRN
YVPQLVEQKAREIVRLGGNALPNEECRLAVLFCDIAGFTSYVENNEKEES
VIHTLNLILGRITKAVRQHEGIIDKFMGDCVMALFREPHKAILAALEIHK
HSYDFNNLRMRAGKDLLLLRIGIHWGKVVIGNVGSSDRLDWTTIGDVVNT
AARLEKNCCPGAILISEALYETTAHMDHPEIRFSKPFHLKLKGKRNKQAV
RYVQTASQPLLHDIFTTHHAKD
>NE1738 Sensory transduction histidine kinases
MVGALAILMVGYSAAEAGGLRDLLEQGGLSAKVDCVAMADMLPGRLQQQE
WDLVLTDDRPDLSAAQVLGLLARLGLDVPVIALVSRQDEQAAAHLIAAGV
QDVLLKSDPVQLMATIRGCQRYIGHLRDLREAQLALERSEARFRAIASNL
PGLVFQFVLESDGSVFFPYVSEGSRSLLGLSPDYLQKKPNSFARLIVATD
VASYDQSLQDSCEHLSAWNWEGRIQAKGDMDVKWISLRATPRRTPRGAVL
WDGIMLNITRNKQIELEIARSRAQLEELSAYSQKAKEQERTRIAREIHDD
IGGTLTAIKCELVPCLDNSSRTPEFYRNKAEAVESLVDMVIDSTRRIALD
LRPGVLDCGIVAAVQWQAREFNQRTGVSCTVACDYEDISLDGDLAVAIFR
IFQEALTNIAKHANASEVRVKLAETGSQVYLEVTDNGCGITNPDMEKVNS
FGIRSMRERCQQLGGQFHIQGGPLAGTEVLIRIPVNGQSTVGRESRLN
>NE0566 Domain of unknown function 2:Response regulator receiver domain
MKADIFTTRILILDDDPFILKLLMRMLANMGFSSVICCENGVDALKLLDD
VATRPDLILLDLNMPGMDGIEFVRHLVERKFSGSLILVSGEDERMLRTTE
KLVQAHRIPILGYLQKPVQPESLRMLLMKLDVPSSMRSGERNTRKIYDAD
TIRTAIDSGQLINYYQPKVRVDTGVIAGVEALVRWHHPVDGMVYPDQFIG
VAEENGLIGRLTHTVLSRAFIQAKVWQQSGYELKVAVNVSMDNLTSLDFQ
DAVVRLAAEAEILPGKIVLEITESQLMGDVRVSLEILTRLRLKRFHLSID
DFGTGHSSLTQLRDIPFDELKIDQGFVHRASGDETLRAIYDASLALAKQL
NMEAVAEGVEDREDWELLRQTGCDLAQGNFISRPMPAEALGEWMEKWHVR
IEAESLVSPKAGKAL
>NE1397 CheW-like domain
MEPIAAKPGFGGFRIGGMELALPMQVLREVVPCGGLARLPCASPCVIGGI
DLRGIMVPVVDLRIVFDMPTPRVPFQNVMIMAHENRLLGLLTEAVTGVFT
GESEEINPISFAAADQPVFHGSIRRSDNGTLVNLLSPSVLATLRDVPLAD
HREMKKKAATRTDAASGQDKVMPVLLLRCNRIAFAIDAMEVYTTLSDPEI
RNSPLAMGSCRGVIEHAGSRIPVLDLLEICGLGKIEPDTPLQAFLIQLPK
GMAAFLVSKVIDVVRIRAGEIIDVPTYALPQPELFSGAIPKSSLPASRSQ
QEAILASQFLVLRGAGLKSNHEIMALADVSSPQQPFIHQDHSQTSVAGKK
NTSRKRDMVTYLLRSETATPFEQIREILPFNHSIPVFEQTGPLLGMIVIR
GRSIPVVCLHRLMTGQFTPASSSAYILVVEIDNEVMGFAIPALKSIETAE
WEPELPQFGGSADDDLKRAIHSNKLAQIGNGNAIRMLPMLDLEKIGRAFR
ARQLSAA
>NE2434 putative transmembrane sensor
MSDSNTSSLPRAAQLEPDAAPAVAVLQQALQWQVIFWSGEATDRDRMRWQ
SWLAADPAHARAWAQVQRTDEQLQTLASPAAEVLRSADARRCKARRTVLG
MAGLLAGAGIMGCGLRQTAQWQMMMADDHTGYGERRNIELADGTQVTLGS
ATAIDVCYSAQARQLLLRTGEIFIVTAPDSADRPFLVQTTRGSVQALGTR
FNVRESGEQIQVAVQDGAVAIRPAGMNPGDVVRLDAGQQTCFDHTKVEAA
EALQISATAWTRGLLVAERMRLEDFLVELGRYRSGVLRCDPAVRDLIVSG
VYSLDDTDQSLRLLAQALPVQVQTVTRWWTIVGPRPMK
>NE1719 putative anaerobic transcriptional regulatory protein
MHNCAIPGHPTAPQQRSSCTTCSLRELCLPVGLTDEEIEYVGNLTNHKLR
VRRGEYLLHAGADFRSLYAVKNGSFKTYTLRVDGRQQVTGFYMTGELLGL
DAISPEKHTCDTVALVDSEVCEVPFIKLEEIGRSIPSLMSQFHKIMSREI
VQDRGVMMLLGSMRAEERLAAFLLNLSTRLARRGYSSTDFILRATREDIG
SYLGLKLETVSRSFSKLQEEGLITVNNKHVTLHDLGKLNRMIGNSMD
>NE2075 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)
MAGWGIRSITGTSKLRAAMLLVVVGLLSVSGWLQRLDWLVYDEIISRQSF
QPDSDIVIVAIDEESLRTIGKWPWSRELHAGLIDRLSQIGSNVVALDLLL
SEPDVDHPEADKRLKTAIFTHGNVVLPVAPAQNASGDRFSLIQPLASLQR
RATLGHVDVELDRDGVARRTFLYAGIDIPAFPALGLALADKGSLPNRMRL
LSRMPEADKTIVNTGNSWVRSREIMVPFAGPPGTYPRISYARLLNDDDLL
DDLRGKIIIVGMTATGLQQGFLTPVSLTRHNYMSGVEWHASVVDMLRNGR
SIYPVPEMVAIAVTVLWVLAVLLVVNIVPGRFRSLVLLVSLAAGIGLVTM
LLGVFHIWLPPGVALIGTLAVYPLQSWQRINEFIQSQFITGSCLQAVFDS
VQEGVITVDAKGNILYLNQESERILGARSEQLIGKPLEQLIGVCLIPDKQ
DRDVNGSGSADTRPDSRIQHCVLTLPSGDRRTIRVTHRALYDRWRIPAGA
VVTISDISDTLEMKQQIARQANYDVLTMLPSRNFLLSRFGELAVSARQHG
AALIVCLVSVDNFSKINDAFGYHSGDALLKMIADRLLKLVCSEDLIARWS
GDEFMLVVDRPVREGQELQFARKVQETINRRFEINGQEVFISASIGIRIS
SQPDQVDEKSEIFLDEAVSAMRRVKRQGGNGFQFYASGQMNAWTREQLEF
ERDFRLAIENQDKALHVLFQPIVDVQQKRVVHNEVLVRWAHPTRGLLSPG
DFIPLAERVGLIGQLGDLVLWISCRIAADLAKVGQAVDISVNVASRQLLH
PDFLQKVAGVLERTGLPAGRLMLEITESAVISDLPRAAEALVRLKALGVA
IALDDFGTGYSSLSLLRELPLDILKIDKSFIQGIEQDHPGDEKFDFAIAR
AIIALGDNLGLGVIAEGVETEKHMEFLRKHHCYLQQGYYFSRPLSTTQLM
QFMGRPDSIRV
>NE1891 hypothetical protein
MDDELKSLEDKIGLLIRLYQETREENAKLYRLLENAEAVNRQLAERMQTA
AERLKVLLNNLPEG
>NE1409 possible phoP; Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
MRILVIEDEFRLQNQIRRQLEAAGYMVDTSSSGDEGLFLATEYRPDAAII
DIGLPGKSGLEIIKALRERGSLLPILILTARSSWQDKVQGLEMGADDYLT
KPFQMEELQARVRALLRRAVGIPQTLLKCGPIAVDVTAQSVSVDGANIEL
TSFEYRLLEELVCHRGEILSKESLADALYPHNEDRDSNVLEVMIGRLRRK
LDPEGTLKPIETMRGRGYRFTLECNSKSP
>NE1314 probable two-component sensor
MAETGNFVFRAVSDLRDTETKQTNGVKNGSMGILNILNQSPSAKNLQRLF
LLRIIAIISQIIIFWTVYSIIELELPWTAIIVTISLLAVLNFLTWIRLRY
SWPVTNPEFFTQLLIDVAGLTALLYFSGGSTNPFISLYLLPLTIAATVLP
WHYTWTMAAITISCYTFLLFKFIPLPHDHLDDHSRHMFEFNLHISGMWLT
FVLSTLLITSFVVKMNASIRDRDKELSRSREQALQNEQIIALGTLAAGAA
HELGTPLSTMAIITGELQQELPGNTEFQNNIRILRNQISLCKQTLTHLLA
DAGQARVEEGNSQPVDIFLQQVIDKWQLIRPSIRFTSQSEGVQPVPIIMN
TRLLSQSILNLLNNAADASTRQVTVISRWDEKQLHLEILDDGPGLDAEAA
EHAGEPFFTSKGPGQGFGIGLFLANTNIERFGGSVRLFNRPEGGACTHVT
LPVLHGTTSTSL
>NE0937 possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding
MNTHSLVPNYGISARQCYEPIRVLIVDDHIDLISNVFAYLENKNFILDAA
RDGESALELSSNGQYDVLILDWMLPRLNGLQVLQRLRAADVDTPTLILTA
KSDIPDKLSGFAAGADDYLTKPFLIAELEARILALHTRRIGRAKILRVGS
LIYHLTSQQVMRDGSIIHLHSGSRKLLQVLMRESPNVVTKDRLESLLWGE
DRPDRDLLRTHIYELRKSIDGDYPLKFVQTVPKVGYRIVDPELGP
>NE1635 conserved hypothetical protein
MKVEQLSLDIFHTLITGSGLRVKAGPFNLSIQTCLPSLIDQLYRMYSHYS
LVDETEIAEFHVRIIPKHSIRRPLAQFIQFQIDGRSPFPPVPAKQALATL
EWGINLAIAMRINHLLLFHSAAVERNGHVLLLPAWPGSGKTTLCTALIHR
GYRLFSDEFGLMDPQSGEFFPLPRLMPLKNQSIGVIRDYLPEAVLGPEIP
GTLKGTVAHVRPPQESIERADETAKPRWIVFPKWSAGAALRLESLPQSEA
FLLLATNAFNYEVLGETAFDAVTSLVRNCECRKLVYSDFDSALAALDELT
DG
>NE0580 Domain of unknown function 2
MIRTIERIITSTGFSLQHSDNGEITGLFYHCKLSSAYQPVFEAARNNIIG
QEARIRADLNGNGEIQLSPWHIFALAPDDEQLIKLDRLCRTIHALNFLDN
ITNKQMKLFVSVQPRLLESVKDDHGSAFEQILDIIGIRTSRIVIEIPVEA
NRDWRLLKRVIMNYRAHGYLISVNYSGTNNDRISELGKLYPNVIRIDARD
LLRRSVLDPLIVTAHNQGADVLVGNIETSYQLTDAIHAGADLLQGNFLAR
YSRKADNMLTPFSWQIPDERNGYRFDNESLQENQPYRSI
>NE0613 bis(5'-nucleosyl)-tetraphosphatase
MATYAIGDLQGCHRHFLELLDLIGFNATRDRLWLVGDIVNRGPDSLSLLR
TLIELGDAVTMVLGNHDLHLLAVAAGSIRQQHGDTLQPVLEASDSSRLLD
WLRHQQLFHHEDEYVLVHAGLLPNWSIEQAQILAQEVETIIRGDRFQTFS
RSMYGNVPDHWHDRLQGEDRWRVIINAMTRMRVCSPEGRMNFSCKGELSS
VPDGLLPWFEIPWRASKDTTIVFGHWSALGLHLTPNLIALDTGCVWQGCL
TSVRLEDRKVFQVPCVRH
>NE1860 conserved hypothetical protein
MVNPQFASNFYFDQRLNTEAVKLLPGEYFVTTRNMVLSTVLGSCVSACIY
DGQSGVGGMNHFMLPRGEDDQGLQVECARFGGYAMDILIRELLRNGAHKE
NLVSKVFGGGNVQRAMVSSMIGSQNTRFVKKYLAERGIPILAADLEGNHP
RKIHFFPKNGRVLQKKLYVSRNDTIVEREQNYSRLLLSVAQSAIQPGTRE
N
>NE1974 Sensory transduction histidine kinases
MLYLLASAGANTEFFERHYRWLIVSITIFLLLLIGVVGFLLGRLRRRLKT
GEFGSKLALRLLMVFSLMAILPGVLIYSISVQFLEKSIESWFDVKVDRAL
EGGLTLGQTVLDNLLEELQKKAQVAALDLAEPASFPLTVLNQLLIQSQIQ
EATLFNQEGKVIAFTSLDDAVLFPEIPNTEAMRHIRMQKNYSAVETLADN
TLYLRVLVPVNVLSAEEDIRVLQVLQRVPPSIARNAEIVQAGFSDYQELM
LSRQGLTRLYSATLTLALLLALFSALACAFLISEKLSAPLGLLAEGTRAV
AQGDFSRRHQVHSTDEFGILTESFNLMTEQLAAARTIAQQHQQEVENARA
YLENILANLSSGVIVFDKALRIRAVNQSAEQILQIPLISFEGLTMEECAE
QESGLRLLAAEIRGGFDSEEAGEWQRQVLHFTADKEQVLLLRGSRLPQAS
GGGGVVVFDDITSLLQVQRTVAWGEVARRLAHEIKNPLTPIQLSAERLQH
KLVSKLDEPDAKILKRSTETIVSQVEALKRMVNEFREYARVPELELCQVD
VNRLVREVLALYQMSDNTENESPQPPITLELAGEISPVRGDPARLRQVIH
NLLQNAQDALTGMEDARITVQTRSVSNGIELSVIDNGKGFPEQVRAHAFE
PYVTTKPRGTGLGLPIVKKIVDEHSGTIKIQNIQPHGAQISITLPALPCS
TPQPSTKTA
>NE1078 putative transmembrane sensor
MTHPSVDQENLPQTASLPENIIEAAITWSIRLDYNDPTPETRQSFDQWLH
ADPLHRLAWQRVDSLNNLRNDCRSLPSRLAFDTLQEVDSRRQSRKLSRRN
AMKLLSLAGITIATGWTVREHTPWQRLLADASTVTGEQRVLHLTDGTVVV
LNTDSAVSFDLTEAQRLIVLQRGEMHITTGPDSEVSARIGRKRPFRVRTP
FGELQALGTRFVVRLDEQHARVSVQEGAVELHPSAGGSSAIVQAGESRRL
TGSSILPEADRYFEEDGWVSGVIAGKNIRLADLVAELSRYRPGYIVCDER
VADLPISGIFHVKDTDKALQFLAQTQPVSVMYRTRFWVIVGPKSLYR
>NE1579 PemK-like protein
MAKILRGEIRWANLNPTVGREQSGERPILVLSQDIFNERSGTVIAMALTS
QEQRAGFPLTYEILKSSLPKRSWVKISQIRTLSTERIGKKIGAIAPEELA
QIVEGLNEIIGS
>NE1095 putative transmembrane sensor
MPEKQPIPDDIAEQAADWIVRLTAGDATEREQAQSGFEVWKKQHPLHAEA
AASLQQVIGRVNEVRATTHGNPEPAHAALKAALAEGNRSRRRFRKTVATL
VVACALLLPAWQLLQIYPPAYLMADLRTTTGQWQTHDLPDGTRITLNSIS
AVNLHFDIERRILELIKGEILVDVAQDTDRPFLIETAEGSIQALGTRFVV
DRHEQTTTLTMLESKVSVQTAEQRAEHSHESTLVQAGERIHITAQGVSAI
ETIDTRTISDAWQYRHLVVQNRPLTEVLDELNRHRRGHILYDRAQLQGID
MAVVLPLDDTDRALQLLVDSLPMIRIRTLTPYLVLVDLAPASE
>NE1306 conserved hypothetical protein
MIRGDLVTIAVPGDFGKPGFALVIQANLFSEHTSVTVLPVTSMLVAAPLL
RITVQPGAENGLQKPSQVMVDKIITVKRDKVGPVLGCIDPDTMVEIERCL
AVFLGIAK
>NE2139 putative transmembrane sensor
MPASGPPDEQLLKQALKWFFLLQSEHCTDKDRRKFNRWFCKNEAHQTAYA
HAERLWSETDRLKETPDIPGLREARQRRPKHQPAGILGWALFFLISSALM
SIGWLEYSAETVTYSTRLGEQRLISLADGSRINMNTATRLHVRISYLQRK
ITLDTGEAVFDVAHETWRPFVVHTDKLQIRDIGTRFNIHKQQDDISITVL
EGAVEIDGVRLDEGYQQHYSSRSDHAILRPVDTEQIAAWQHGRLIFRQTP
LAAVTAELERYHPVHFIFTDPAIAHETLSGTFGTRDLPLFLSSLEKALPV
RVKKLPDGQTLLIDRINKKM
>NE1028 Universal stress protein (Usp)
MSVYHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNIPMPDTP
YGTAIPLDTETTYDAMLDVEKQKLSQIGNTLGIDPAHRWLVWGEPREEII
RIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVLAVRLRDD
>NE1299 Guanylate cyclase
MKLWRWRFALAVFIGLLGAAVYLSPQGTAIEEQFGLYWLFHLRGERTAPA
DVVVIAVDQASATHLELPLKPSLWSRALHARLIDRLVEAGARVVVFDLVF
DRPGSDARHDKQFAAALKHAGNVVLVERLDFEETRFPGMAADGSYTHILR
EYTGKILPIIADAARAHAPFPLQKSSWVSYYWTFRPGGSDMPTLPSLLLQ
LSSAEVYEHFLTLLAGIDPALIRQLPASVNEADVENLVLDLRNLFMQKPV
LAEKLLQKSAEGENLDTAQQRILRALIDLYGGSEVRYLNFYGPPRTIRTI
PYHLLLDEGGGQPETAGELDLAGKTIFVGFSAETVSGQDKVRDDYQTVFS
LPDGLTLSGVEIAATAFANLLEGESIHPAAPVNGALILLLLGTGVCLLCF
VIPARNTMVHTLGMALAGILSFCAYGSASVWLFGQWQLWIPLAIPLMVQL
PVGVIGIVTLLYFEADRERRRIEALFGGHRPEPVVRDMVRGAGPIHTEGQ
LVYGACLATDAEKYTALAEAMDPRQLAALMHAYYECLFEPVERYQGKVSD
VIGDAMLAIWAAGSADPLVRERACLACLDIISAIERFNHQGGYGRPPLPT
RLGLHFGEMVLGNIGARQHYEYRAVGDIVNTANRIQGVNKHLGTRLLVSE
EVVNGLNDLLLRPLGRFLLPGKSQPVNLFELVARQSGSNAAQRQLCAAYE
QALHVCQTGNRVDALHRFEMIHERFPEDGPTRFMLTYCREPRLFPVREAG
ELIISIQSK
>NE2485 putative transmembrane sensor
MTNEVSSQEGTAQATEASHHGADRFPESVVDAAISWAVRLDYNTPTVAQQ
QAFECWLQADPLHGLAWQRVHSLKGFQSDLGELPPGLAYDTLQTAQRHRE
RSGLSRRNVIKLLSLAGFALSTGWIARENTPWQRLLADASTATGEQKTLQ
LDDGSIIVLNTDSAVSTDLAGPHRLLMLWRGEILITTGADTGIAMKRPFW
VHTPFGRIQALGTRFVVRLEADRARISVQEGAVELHPVNGGFPVIVQSGE
SRWLAEEGTLPADLQGFEADSWQKGVIAGRNIRLQDLLSELSRYRPGYIT
CDPGVADLRLSGLFHVKETDRTLQFLTQIQPISITYRTRFWVSVGLRDFH
>NE1201 Universal stress protein (Usp)
MIRRTLIPLDGSELAERAIPHLLRFVEPDQTELLLMAALSSTSSSLFEDT
ARLLMSGQTALSKGHEAGKRVDIVAQQLRQTGFNVANRLLSGAPAASILH
LAEEAYVDLIAMSTHGRTGLGQVLLGSVADEVVRNARPPVFLVPAAVVVK
PDSLPRTILLPLDGTPLAETAIPVASQFAQNTGATIYLIRVVEPGDSGDE
LQDAQILAGSDYAGEQPIIRQAISYLERIRLRLQLAGVSSCSRIAAGDPA
DVIARIVHAEDADLIVMSTHGRSGMERMVHGSVVSRIIGNTICPLLLMRG
RVPVEAYERTGNEVSAVSFC
>NE1124 atoC; response regulatory protein
MNANQIQKKLLVIEDDPGLQKQLRWSFDDCNVAVASDRESALAQVRRHEP
AVVTMDLGLPPDPDGATEGLATLQQILAVAPDTKVIVLTGNQNHENALKA
INMGAYDFHQKPLDANVLSLIVNRAFYLHRLQRENRELLKSSSSTAIPGL
ITNDPGMVKICQQIERIASSDVTVTLLGESGTGKEVLAKALHQLSDRNSK
RMVAVNCAAIPESLLEAELFGYEKGAFSGAVKQTPGKIELAQGGTFFLDE
IGDLPLSLQAKLLRFLQERVIERIGGRELIPVDVRIVCATHQNLKKMIEA
GTFREDLYYRLCEISIHIPALRDRIGDAVLLAHHFKNQFRVKEKRQSLNF
SQDALDAIGSYSWPGNIREIENCIKRAVIMAEGSQITAADLGLQPAADSF
APVTLREVRDKAEHEMLIKVLARVNGNVARAAELLGVTRPTLYDLMNRHG
LK
>NE0049 Sensory transduction histidine kinases
MILTSLTQRFAIWFTLVALLPIALVGYGLLHIFEGEIRKSAIQQVSSIAD
KKVEQIDSYLRERILDATFIQTSDTTRQAIDEFSQIFSQFGVDSETYRAL
DARHQAHYERYLEGTGYYDLFLISPDGWIVFSVSHESDFATSLLTGPYQD
SGLGQVFRQTKETHQSSLSSFEYYPPSHGAIAAFVAVPIMIEGNFHGVLA
LQIYSEHIFDVLTNNVGLGESGETVVTYMENKHLARVMAPLREDPDAALK
RTISLDEPQFSLAIRNSLSGEHGGGVVTDFHGNPVIAAWRYLPRVDWGMV
VQIDTEEAFASVMQMRVMGLVVLGLTFLMAILGALLFNRRVVTPLKNLNE
CAQAINAGNLQHHIPDEGWDEIGQLASAFNMMTERLDISYRHLEARVAER
TARLEQLNAELAIKEEETRSVVEHMVDCVVTTDERGVMLSVNPVMEKLFG
YTVEEAIGQNVAVLVPKPDRDMHEYYMQRYCHTGYGQQYVGRPQQPGGHH
VGLGREVEGVHKDGTLLPVYLAVSEYFVGDKRHFTGIMRDMREHVKIRQD
LEQARRDAELANQAKSAFLAAMSHEIRTPMNGVIGMIDVLSQTSLSSYQK
EMTDLIRESAFVLLEIIEDILDFSKIEAGRLEIEQRPISLEKVVERACGT
LTHMAASKEVELILFVDPALPKNVAGDALRLRQILINLINNAIKFSSGMS
RPGCVIVKAVPADRANGDVVTVLFQVIDNGIGMDDATRERLFTPFSQGDT
STTRRFGGTGLGLTICRRLVELMKGDITVESQPGKGSTFKARIPFRMIQE
GAVQQDEPDEVDLSGLSCIVMGSEDGLSPQLATYLKYAGAAVERISGLSA
TLERIGQLPAGEWLLVADASDGEFPVDELRAAFGDRPDASAGDQLRFVIV
RRGRRHRGRMEEEGVVTLDGNVLYRRVFLHAVAVAAGRAKLEEDQTAAVE
VVSKVVPLSREEALQQGRLILVAEDNEINQKVIHQQLTLLGFAADIVING
REALQSWKNGEYALILTDLHMPEMDGYQLTQSIRSEKTGHYQIPIIALTA
NALKGEAEKCRALGMDDYLSKPVQLEQLKSVLEKWLPRSKQTEQQEERIL
PPSAATGKVVVDINVLKSLVGSDQAVINEFLQDFLHDTRKIAEQLHSAIT
GGQADKAKFAAHKLKSSARSVGALALGEWCAQMEMAAKEGDVEKLVELLP
GFEQELAQVESYIKKVLAQPDVEAQKDEI
>NE1154 Domain of unknown function, DUF9:HAMP domain
MKPVLYSIKSKIVIFAVIATLLPTAGLGLLSFKQNEALIIDSVTRELRVL
ADNVNRQLNLWMDENTLTIRALSTSNPVIEGLTILKKQTDNTHENTAKQT
QSVMSGYLTAVRDKLDDVLELTVFDSTRKIVASSASTPEVLESPERWTHA
SLTRGSIAITPHWNDRYDTAAFSVIYPVLSYDSQLIGAIAATLDLGIFRN
KLMETRKFSSGEITLLDQNSRVLLSSASGIDHLAVPNPHYLESMQILEES
ITHDGLSYPKAIGLLYASENVPVTILVEQDQSAIQASWMKLRNRFLEFVA
ILIVIVTLVALYMGHSIVTPLKQLISAVRGIVEGNLDIYLPVKRKDEVGQ
LTTIFNQMTDALRNKHTEIMAVNQAMQQQNQLLQKLSITDGLTSLYNRAK
LNTILIEQLARFKRNDRTFCLLMIDVDHFKTINDKLGHITGDKILITVAS
ALLKSIRTIDYAARYGGDEFMAILTETNSSAAIKTAERIRSEVSAACSAL
EEHPIQITLSIGITQSHHDDTTPGDLIARADVALYEAKKRGRNRVYCVDV
AHTDP
>NE1989 putative transmembrane sensor
MNSTRNITEELPETILEEAAIWQARLQHGETDIELQKAFNIWLAADARHR
QAYEEMESLWGALETPVTQLMAEQSDHTFAAKTVPLHKLRQRSLGRGFQC
LALAACLVLAIVIGWQQDWVTRWQSDYMTVIGQETSFLMADNSRITLNTD
SALAVDFTAERRQVRLLKGEAWFEVTSADNRPFIVATSAGSVRVTGTRFN
IRLHQDTAIVSLDEGQVELSTPDHSNNPNGSPIVLFPGQQATLSPQGISS
PSPFDHTAITAWLRNQLVFYDTPLAEVVDTLNRHRHGRIFITNQKLKALK
VSGVFSTDEPDTALDVMINTLPIHLLRLTDYLVLIH
>NE1191 putative transmembrane sensor
MNQPVPNRPAARPDTPPASYPQEEADARDFAEFIAGQDPLDAAAAGWVVR
RQDGLTPEEEAELQEWLAADPAHARALAQVEDVWSRMDELPDEGVVALKA
GLPSHKAGTALPPSVAIPTPVPVAPEPQHHPRPSSSIQPASPGRRSWLIG
LGRFVPQITAAAVAFSVVSVGWYGWSTWQHQPTFQQSFATARGEQKKVNL
PDGSTLWLDTATRAEVALYRQRREVRLTDGQALFAVQSNPDQPFDVLTGG
TRITVVGTRFSVRRTRSGLGAEGSVSVVVEEGRVRVASRSAAHKMDSSSS
VELSAGQSIIADAAGALGPVNRDDAPAATWREGRVSFSGTPLMQALAEFE
RYGDTGLVIRDPAVAALKVNGSFDLRQIGAFARALPRVLPVQLSTRDGQT
EIIAAPGG
>NE1858 conserved hypothetical protein
MTIQPENFRKLTEWTQFLSEVEIPVLRKTANDLAALREQEPNPSARNVAR
IIRHDPLMTVKLLRHLQQHKHKRQQQEIVQVEQALIMLGVENALDQVVAE
PLVQHLLQQRPAALVNLLQRIHRAHIASNYALEWAIRLYDTHFEEIRIAA
LLHDITEMLLRCFVPDKMLEIDALQRQDSTLRSATVQKTILGFTVYDLQA
TLIEAWALPELLIMLMDKKHIAHPRVRNVVLAVNLARHSAHGWDDAALPD
DYAEIGELLRITPNDARTLVHARY
>NE1102 putative transmembrane sensor
MSTPGSTPPPSVADQPHPLPLANGHPISGATADAAAQWLTLLMSDEMTDS
DYQCWQQWRAAHPDHERAWQHIEAVTARFRELPSTAAYKSLSPLTNPVSA
GKPGSPGRRKAMGTLLWLGTAGVGSMLVSRTQIWQQTVADYRTGTGEQRA
IYLADGTHIMLNTYSAIDVAFDAQHRTIRLITGDILITTHPVHTPISDPR
PFIVETAEGRIRALGTRFTVSQRKGRTHVAVLEHAVEVTPAAAPDRQYIL
PAGQQLSFTRHTLNNATTLDKQTTGWTQGQIIADNIRLGDFITDLGRYRT
GLLRCDPAVAELRLSGVFPLDDTDRILETLPSVLPVRVRLRTRYWVIVEA
AS
>NE2334 PhoH-like protein
MTLDAATKSKPVELMFSPTDNERLANLCGALDENLKQVEYAFNVMISRRG
GHFKLYGSVEHTHLAIQALKKFYDDSYHHLSVEQIQLGLIEIRNNPSPPL
GDSDRAIAGSNATSLQLVTRRGNIQGRTARQTDYLFQIKKHDITFGIGPA
GTGKTYLAVACAVDALERELVSRVILVRPAVEAGERLGFLPGDMVQKVDP
YLRPLYDALYDLMGFEKVSKHFERGIIEIAPLAFMRGRTLNQSFIILDEA
QNTTAEQMKMFLTRIGFGSKAVITGDITQIDLPKHQKSGLVEAERVLKNV
NGIAFTRFRTEDVVRHPLVQRIVDAYEKYAPDKESG
>NE1909 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)
MKLIIARYAIRVARFTARGGNFIPEGGKIKGRGLNSIPIRFTLMALVFTA
LCTFLQYHYVLPLIESGTSDSIVVVAILLSISLPAAITYFAANKLTNTIR
ELNKSTDAIAAGDFDRPVDVDCACEVGSLADSFRAMVNRLNSNIVRINTL
AYTDAVTGLPNRAVVSHVLDLAARMRGSADCKGALMFIDLDGFKRINDTL
GHEGGDELLRQVSRRVIEKGFNLTRGQIENCTTAFGELRQTCPEKLVFAR
FAGDEFVAIMPGEFHRRVLEKYAADILKAVNEPFLVSDNELRIGASIGIA
RVTSDSDDPRQLLINADIAMYSAKESGKNQYRFFDESLKNIAVERSQIEA
DLRKAIEEDMLDMHYQPKLNAQTLQVTGVEALVRWKHPQKGAIPPARFVG
IAEQCGLMPALGTNILRMVARQARAWQEVGMPMPIAVNVSAVQFERSGIA
NEILAILEQHAVDPLLIEIELTESMIMSDFATAKSRLEQLREAGAQISID
DFGTGYSNLYQLSHLPFNVLKIDKSLVDDIGKNSKSEAIVTAIVQMVHSL
GHRVVAEGVETHEQYAFLRKARCDQVQGYLFGRPMPAHELIEWVSDHASD
NGSMNNTLIEKVSRVA
>NE0974 PemK-like protein
MTYLPNRGDIVHLDFDPSSGREIKGPHFGLILSGKLFNQRGLAMICPISQ
GAAAAARTYGTVVTLMGAGTDTQGAVHCHQLKSLDWQVRNVRFKESVPQH
ILDEVLARVEAILFE
>NE1098 putative transmembrane sensor
MNTRLKDTSGHSPIDPRILDEAAAWLMQLHASTVTDMERNAWEQWRLRSP
QHRQAWERAEQLMNKMGGLPPALSMAALTHPGGNNRRAAIKKLALLMTAL
PASWAAWRVTPWEAWMAEYRTMVSEQREIELADGSQVRLNTATSIDVRFN
AVQRLIVLHTGEILIQTAADNAVTPRPFQVLTAEGRLYALGTRFTVRQGE
ERSHVAVFDGAVAIHPKSGDSGVAQVLHAGNKTVFTAEAIEVSRPADDTD
IAWTQGMLLADKMHLTDFTDELSRYRQGIVRCDPVLADLRISGAFPIRDT
DRTLAMLQATYPVRIVYRTPYWVTLVPR
>NE0667 possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
MMSTMRVLVADDHEETLNFIRRGLTQAGHIVSTVDNGREALFRATEESYD
AIVLDRMLPGLDGLSILKMLRAGGIRTPVLLLTAMTRIADRVEGLENGAD
DYLVKPFAFSELHARLNVIIRRPAVLEPETSLRVLDIELDLGKRIARRGG
RRIDLQPRELLMLEVLLRNPHRVMTKTMLLERVWDFDFDPQTNIVETHIS
RLRAKLNADFDQDAIITVRGAGYMIRSE
>NE0865 PAS domain:Domain of unknown function 2
MIMYTTPRINVFKPFLSATVAMVVIGLLIALDNSLIFIESHIVAGLWVTL
LMSILFMITQIAHAEKTFSKQFAQLAAQKERLSSEIKHRIWAEKTSSENK
AKLQIVDENFPVMLAYFNTERQCRYHNRAFRQWFGLRPEQIENRLFNEFL
DKSLFSDISSAVERVLSGETIQNQHVLKLANQSICFITSHLTPHFDSAGK
VIGFYILYTPRLMKKGEELLQNVKDRSTAEHKQAQESKTTRDSNENTAKQ
PTRVSIDSSRRIIQAIEQNEFHLYCQKIIPAGSNQESSSYYEVLIRMAEE
ESNLIPPGAFLPFVEKYNLMPRLDSWVVEQVIHYLADQRADPRISFCINL
ARSTLIDPVFYDRVWKLLNAAGIEPQRICFEIETADVAANLLSAVQFVKK
VQQSGCLVSLCSFNHDRGSFDLLKHIQADFLKIDGSLICNILRDAEDLKK
VENIGKFARALKIRTIGELVETRNILEKLAKIGIDYAQGFIVGRPLPIEK
IEYRADSMDDL
>NE0975 hypothetical protein
MLQTLRKAGGSLVMTVPKSFIEQNGLSEGSQVELHLHGKKMIVEAPARPR
YKLADLMAEMPKGLPRVEGWDEMSPVGLEDS
>NE1994 TPR repeat
MRRVPWLLYWRGTSWILFNPQEARSSLEQAYAGFQAEKDKAGLFLVCAAM
IDAYLYAEDNIKPIVAWGERLQKLLSLYGDFPSIEVEVRVYGSLLGLIFS
APHHPLLQILEARFESTLQSSVEPALRIAAACAIVFLPLWRGDARKARRI
MDETIPLFKGISISPLLRILWCNIEGGYAWAIAASAHIAEQKFHEALQIA
QESNISVLNAMLWTHGAYSALSAGNLVTAESCIEKLKLNIDAQRKHDLTE
FRYLRAGIEFLREDFSKALDDASAVLKSHEEMERPFLREINRLGLAQILI
EIGDVEPGRSHLKQTVEYAKIMRNPMLEYQCLLIEAHSWIKQGNADKALV
PLREGLRIGRENGFLLINYWLRPKVMAHLFSLALQFGIESVFVRNLIRHW
GMKAESQALEVWPWSVRIYTLGRFEVFLEDMPLHFSGKAQHKPLELLKCL
CAYGSLAVNQDRITDALWPDSGGNAAEQALRTTLHRLRKLLRHEKAIRLE
DKHLSLDPGYVWVDCMAFDRAIHHSGMADRNSLQQALSRYRGHFLEGETA
SWALTFRERLRAHYIKMSERLGGMLEQDGGWPEAIDCYRRAVEIEPLAEN
FYQHLMRCHAQLGQRAEVLSEYQRCRHQLLCRLGISPSQETQLLYQKLIN
T
>NE0455 Prokaryotic dksA/traR C4-type zinc finger
MGKQLESRTIPPYEPKAGEEYMSPEQLAHFRKILEYQRAELSMEIDRAVH
VMQEESTIFADPADRATQESDMALELRSRDRERKLIKKIDEIFTKIDSGE
YGYCEKCGIEIGLKRLEARPTASLCIDCKTLDEIRERQMAK
>NE0534 putative transmembrane sensor
MSEVTDHHTVSLSEQAAEWVVRLSDSQISTAQQADFEAWLAQDIRHREAY
EQISRLWQSVTPQRRRKHRPAGLLASIVLVLIGIYCLPLSTWLADERTAT
GEIRQVALPDGSTITLDSDSAADVVFDTHARRIILHRGRIFAAVVPDAAE
QGAHHRPFIIENRDGTAQALGTRYIVEQTGDHSRVSVVESSVNVTSRDRP
DQSITVYSGQSIRFDSEQIHGQEPIPPAAASWVQSRLVYRNAPLSQVIDD
LARYRTGFLRISGAAAQLRFTGVLPADDPDTALKILQHALPIGIDRYTRV
LIWINLQT
>NE0548 putative transmembrane sensor
MPESFHDDIDATARHWFIRQQGRALSAEEQRALTDWLAASPDHRTAWTRA
EEDWQSLDRFRTDLSSELNKARHYRPRHHSSRYLKWAAAALVLIALPILY
RASTGIPRHWQTATGERQHVTLADGSQLSLDTATRVTITQSWFQRLIQLQ
EGEIYLEVAPDWRPLQVTAADTRIRDIGTRFSVRDTPEKFTVQVEEGAVE
IIRRDKHLVLHAGETVTRHPATDRWQLATVQGDIANWRQGILVFDQHRLP
EVLQELARYHAVRFDLADPALGRKQISGRFRLDELDTTLRIIAETLNLNI
EHPTPDRYLLSAAQKQ
>NE1296 Cyclic nucleotide-binding domain:cAMP-dependent protein kinase
MVSMSTYANDFYNQSREVTGTQLTVIREFRDFSASDLEMVAQLLQMQHFL
AGEEIVRYLDHSDNVFFVLEGGVRIHYFGYSGDEVILCDLSQGEFFGELT
AIDGQPRSATVVARSDSLLAVMSNQAFIRLVHESPVFCMAIMQRLAGQVR
RLTERVFDFSTLAVRNRIHAELLRLARQHMDSPNTAIIKPAPTHAELACF
VSTHREAVTRELSELARNRLIQRTGHELRVLDVERLRKMVDLARGPVGD
>NE0317 possible response regulator
MVVQIHSFGPLAVEVAGESVIQPGRNQKKILELLATIIALGGRNVNGNLL
KEILWPDAEGDLADLSLGTSLHRLRKLIGKEAVLLNTGMVSLNDGCCWLD
LWIFETISCKLENVLKCSDQQPLATELVDQLMTLYRGTFLKNYDSGWILL
KQEQLLDRLIRLLNLSADCYEQHGENERTSQLLSKILELRPLSEANYRRL
MQHYIKLGWTDQALHIYRQCQRILSGGFNIPLSSEIHRLAKQLQTGT
>NE0837 Domain of unknown function 2
MTASRPVVWTATQLAQAVVLGQLELHYQPIVDLRSDQIAGAEALLRWRHP
SLGLLPPGQFLPVAESSGLMPEIGAWVLREACQQMHEWLPVQWRPFRLAV
NVSARQVGPGFDDQVQQALAAAGLLAEYLEIELTESAAFGDPAIFPLLDA
LRAIGVRFAADDFGTGYSCLQHLKCCPITTLKIDQSFVAGIVDDTRDQTI
VRAVIQLAHGLGMEVVAEGVETPASLTQLRLADCDAVQGFLFAKPMPAAA
FAAFVKRWRGVTMNVNEPTTSCCVCCKEIPLDAAFTPEGSEYVEHFCGLD
CYERFQARAKAVAEPVTTPAAGGPTPSG
>NE0059 HPr(Ser) kinase
MSQVSITQLFEENQEKLNLQWGEPSAVIDRQLENHQINNSTQELIGHLNF
VHPNWIQVLNQTSVNYLDQLDDVSLKKRLNQLAKSQLACLIVADDAPIPN
AIRQFVNEQSVPLIQSATASLEIIWRLQSYLARMLAPAITRHGVLLDVLG
MGVMITGESGVGKSELALELISRGHGLVADDVVELHRIGPETLEGQCPPL
LRDFLEVRGLGMLNIRTIFGETAVRRRKNMKLIVHLEKTVGSSINAYERL
PLSNLNEIILNVGIRKVIIPVAAGRNLAVLVEAAVRNYILQLRGIDSTQE
FIRRHESEMAGNTAEHFDDSHNE
>NE1250 two-component hybrid sensor and regulator
MNTATRINISSVMGIREAIEQIFTLIHRHFDSYATDTDDTRQIEECRYYM
HQLNGMLEMLELNGVAFVGHNVEALLTALQERRTEPDTEVLTVTRQAIRS
IYRYLDALIDGETDNPVRLFPVYRKIMQIQGLEEISESDLFFPDVRESLP
LQPVEPDLDDSSRQEAAKQARAQFQSGLLSWLKNAEDRHSLQKMVEAVRS
VEKLPAPIEQRKFWWISSGFLDSLLHQVQAADKSARRLCGKIEQEIRHLN
KESHTVADRLTRELLYRVARSQPVSERLQEIGRVYDWQIPLSTIDNREHL
DESILDEEATASDLQNMRVLLEDINDRWRRFNAEDQENLSSLLALVERFR
TQAARVNCPPLEKLAGVIHGALSYLRIRPQSMNEGIALDIASSLLLTENA
IDNFHRLSPEFPAQVEVLATRIRAVTTGKGNEDDLPDLPSPDQAGHLAQE
KKLLKQVAQEVLTNLAQVEDILDRFFFEPEIRNDLPVLPELFNQISGVLL
MLGLDRAGTLLDSCRDLVEKLTDPNRPLDQAEQILLADALSGLGFYIEAL
RNAQSDSEEILTATINQFNQKLAGQSLSTDIPAISAEPALTAPEMPSEAA
TDQLYDPELLAIFLDESTDVLASIAAHLEACYGDHLDLAALTAIRRDFHT
LKGSGRMVKLEALSEVAWRIEQLMNRWLSEQKPATGELLDLLAESHRQFC
NWCASLKKNGTAEIRAQHLLDRIREMMYGTEEQTAMDATIPVLPLSAVPE
QETSLEWTVEPVVSPSAAEAESVTETMVQIGKIEVPAELFSIFIKEASTH
VDTLKQALGLSEGNTILSISHESMLAAHTLTSTARALELDFIAQTGQVLE
RWFNRLLMTSGMPGPQILPHMTAAVNLLDDMVTAIRNHQYPSIETLQAGE
ETTNELARLLEEVSAQMPETEPAESECIKPESAELQASEILAEIAPVLLQ
ESAVTLPVSPVQSTETEAESTGVDRELLEVFLEEAQELQSEIGTNLRAWR
RQPEQVAARKAVLRALHTLKGSARIAGALQVSDQAHQMESDIESTYDQAV
PAALLDRLESRFDTILDDIEQLRSSLQPVPQPVSPIEETGIRPDLPVFPV
IAEDDQPVRKTVLRVDAELIDRLINESGESSLIRSRIEAQLYDLEQSLQD
LGESVDRMRGQLREIELLAETRIPSGALPSVTDEADFDPLELDHFTRFQE
LTRLMAESMDDVVTIHKSLREMRRAADMAVDQQAHLNRRLQQDLVHIRTV
PFRHYSERLYRVVRQAAKDTGKQASLTIQGEDIELDRSVIDKIGSPLEHL
LRNALVHGIETPQERLQAGKVETGQITLDLHQEGSEIVMVLRDDGIGLDA
GRIRDKAHQLGLDDPENAQNDEQWYPLIFTHGFSTLDNVTDMAGRGVGLD
IVRNELGEIGGNITVTSEKNRGVTFTLRLPVTLAVTQALMVRAADSTYAI
PAANVVHVLEMNSETLGMAYREHHLTWNDDRFPLIYLPHLLGVPHTFPEI
RRHNRIVLLQAGHERLAVHADALVGQCEVVVKNVGPQLSRAPGIEGATIT
GDGSVVLIIDPIRLLQREQVQELLSAGPVAPVNASDIHPSAIAPVVMIVD
DSLTVRKVTSRLLERQGYEILIAKDGVGALQLLRETTPAIMLVDIEMPHM
DGFELIRAVRDNPQLHTLPIIIISSRTADKHRKVAEELGVNEFMGKPYQE
EELLYHIERLIKG
>NE2081 sigma-54 dependent response regulator
MRNLPVLIVEDDPDLLEALCATLKLDGYTTLAASSGEQAIDLLRTHPAGL
VISDVQMRPMDGYTLLQAIKRSHPWIPVVLMTAYGEVDKAVAAMRSGASD
YLLKPFDPHSLLAHVRHYLLTVSDEDESEIVAEDPRTLTLLSLAKKVAAT
SATVMLTGESGSGKEVLARFIHRHSPRASRPFVAINCAAIPENLLESTLF
GYEKGSFTGASQAQAGKFERANGGTLLLDEISEMPLGLQAKLLRILQERE
VERIGGSKPVKLDIRLIATSNRDMPMYVQEGRFREDLYYRLNVFPLEILP
LRERPQDIVPLAQRILDRSAQPRCVLAQSAIRSLERYTWPGNVRELENVI
QRAMILATGSIEAEHLNLPGSSARDTFRGEAQREGDSPLRDIKSLERDHI
LQTLAAVNGSRKLAVQKLGISERTLRYKLQQYRLARC
>NE0515 baeS, Sensory transduction histidine kinases
MSIRIKLFLAFLLTTFVVVMGMHFFTRWSLEKGFTEFIEKRQQERLDKII
DVLEEHYAEHRGWGELAGNKQHWISLLWHAGPHRHRPPKWIIEQAQHEPD
RQWPPAVTPGTAERKWSPFELRVILLDADRSILFGRKELISQLSLHPVQY
EHRTVGFLGLLPGNPVSQASDIYFMEQQADFFFWIALTMVVLSALIAWLM
AYHLGRPLKQIAAVVQRLATGDYKARLPVISKDEMGQLALNFNDTAAALE
QAEQSRRRWVADISHELRTPLAVLRGELEAILDGVHPLTPAAIESLSGDV
LRLNRLTEDLYQLALSDQGALSYRKVLLDPVPLLREDLATFTTDFNHKQI
SVRWINRLFKPVLVNADPDRLSQLFRNLLTNSLNHTDARGQLEITVQRLA
DKLVIELADSSPGVSDQDIAHLFDRFYRVDHSRNRHLGGAGLGLAICSNI
VRAHEGTLMASHSALGGLAIHIELPITP
>NE1866 cheA, probable chemotaxis sensor histidine kinase transcription regulator protein
MSTDLEQFYEIFFEEAGELLAEMETRLLRLDILSPDPEDLNAIFRVAHSI
KGGAGTFGFTDMAELTHVLESLLDRLRRNELELRAEMVDAFLHARDVLKH
QLDGHKGNGSADPAEVEAVNRKLKELERDTGSSHTPSECLSETIESASVE
ESASAVGAAVPVAVAELSVAVAQPVSVPENAATYRIEFDCTNLARPVMEK
LLADLSRQGQLKNLTEPGNETVCTLQLSTQISEEDVWESLAFLVDPTSLS
IEIAGKIADDSPLAAVVPEPVIECEQKHPPAIDQTAATVVEVQEEKEETI
TPVLSNAASPVPVSLVSSGAKQPAGATAGAPRSKSSAEQSSANSESSSIR
VSVEKVDQMINLVGELVITQAMLAQTASQIDPVIFEKLLNGLNQLERNTR
DLQEAVMSIRMMPISFVFSRFPRVVRDVASKLGKQVDLKTVGEGTELDKG
LIEKITDPLTHLIRNSLDHGIETPEKRRELGKPARGTITLRASHQGGSVI
IEVADDGGGLNREKILAKAQSRSLPVNENMTDQEVWMLIFEAGFSTADVV
TDVSGRGVGMDVVKRNIEGLGGRVEIDSITGQGTRISIRLPLTLAILDGL
SVAVGDQMFIIPLTYITESLKPAAEDIRTIQGQGRVVQVRGEYLPVIALH
EIFNLEPTVKNIHEGILVILDAEGSKAAMFVDTLVGQHQVVIKSLESNYR
RVAGVSGATIMGDGSVALILDAVGLVNVTKQRMIHAA
>NE1859 cheB, CheB methylesterase:Response regulator receiver domain
MKKISVLIIDDSALIRKLLTEIINARPDMEVIGAAPDPIVAREMIRTLNP
DVLTLDVEMPKMDGLEFLEKLMRLRPMPVVMVSTLTERGSEVTFRALELG
AVDFVAKPKMDIRNSLEAYTDEITGKIRTASTARIHRLEPVASNGAASGS
IVQMPRHHGISTEKLIIIGASTGGTEAIKDVLIHLPPDCPGILITQHMPE
GFTRSFAERLDRLCKIRVKEAEGGERVLPGHAYLAPGHSHLLLKKSGANY
VTELSQTDPVNRHRPSVDVLFQSAAHCAGKNAVGVILTGMGKDGAAGMLD
MHHAGAYNLAQDETSCVVFGMPKEAITLGAVDEIVPLQDMARRILARLVG
AGKQAVRV
>NE1861 cheR, CheR-type MCP methyl-transferase:Generic methyl-transferase
MNARASGEHNTREYAFSSHDFECVKKLIYARAGIALAENRQEMVYTRLSK
RLRATGTNNFNDYLQRLERDSEDVEWESFTNALTTNLTSFFREAHHFPML
AEHVKKRQPGHTVKLWCSAASTGEEPYSMAMTMVETFNSMKPPVRILATD
IDTEVLAAAREGVYPLDRLESMSSERIRRFFLKGKSSTSGYARVRQELRD
LVTFRPFNLLDPKWPMRGPLDAIFCRNVMIYFDKPTQYRILQKFVPLLDR
DGLLFMGHSEVFQHASDLIRLIDRTVYKPVKK
>NE1865 cheW, CheW-like domain
MLLTQAAAAGESLNPVGNLASSEFLIFRLGKEEYGIEILKVQEIRGYDAI
TRIANAPEFIKGVINLRGVIVPIVDMRIKFNLGEALYDQFTVVIILNLSG
RVIGIVVDGVSDVINLDTEHLRPAPEFGGVIDTEYIIGLGTMEERMLILV
DIEKLMSSSEMGLLEQTGK
>NE1923 cheY, Response regulator receiver domain
MTDKNLRFLVVDDFSTMRRIIRNLLKELGFNNVEEAEDGAMALKKLRDGG
FDFVVSDWNMPNMDGLTMLQNVRADDALKDIPVLMVTAEAKKENIIAAAQ
AGASGYIVKPFTAATLDEKLNKILQNMAVHA
>NE1924 cheZ1, putative chemotaxis protein CheZ
MNNSFDTDKKTIDHPGQLARVLHNCLSELGYDWRLRQASHGISNSKDGLN
YIASKTTQAAECSLLAVENARPILNNLSADAANLHKLWCQIPETTAAIIA
NQPTLNNALKQTLDFLNNVSSQAASTQACLTEIMIAQNFHDLTGQVIQNI
SRTIETVEQEMLQLLANDSANEEKEIKLDNGLLNGPVVNPQKQDDVYVNQ
AQADNL
>NE2410 cstA, Carbon starvation protein CstA
MNQLSKWVGWSLFSLLGAAAFGVIALNRGESISAIWIVIAAVCVYLIAFR
FYSQFIANRVLKLDTTRMTPAYKHNDGLDHVPTNKYVLFGHHFAAIAGAG
PLVGPILAAQMGYLPSMLWLLAGVVFAGAVQDFIVLFISMRRNARSLGDL
IKSELGHVPGMIALFGAFFIMLILLAVLSLIVVKALAESPWGTFTVAATI
PIAMFMGIYSRYFRPCAIAEISLIGFTLLILSIIAGQYVQEDPAWAAVFS
ATGEQLTWVLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIVGLAIGVII
LSPELKMPALTQFIDGSGPVWSGDLFPFLFVTVACGAVSGFHSLIASGTT
PKMIQNETDARFIGYGAMLMESFVAIMALVAAAALEPGIYFAMNSPAAII
GTTVESAVQTISQWGFHITPEMITQTTQNVGEHSIISRTGGAPTLAVGMA
QILSGVIGDTAMMAFWYHFAILFEALFILTAVDAGTRAGRFMLQDLLGSF
IPAMKRTDSLTASLIATGICVSGWGYFLYQGVIDPLGGINTLWPLFGIAN
QMLAGIALILCTCVLFRMKLDRFAWITVIPAVWVCICTLTAAWQKIFHDN
PRIGFLAHAEKYQDAVIQDIVLAPARSIGQMQQVIFNDYINVTLTALFMA
VLISILMFGIRTILQARIILHPTTREAPFELLPAYASIEK
>NE2278 epsP, Low molecular weight phosphotyrosine protein phosphatase
MAEAVLKHTLVQAGKTDHFVSSAGLGALIDYEADPTACRLMAEKGLDIST
HRARQLTDDMIRRADLILVMETWQKAAIEARTPSAKGKVFRLGEWEKIDI
SDPYRKDSSEFIRSLILIEQGAAQWATKL
>NE1218 fecR, putative FecR protein
MEQAAEWYALLRSGEATHDDHARWQSWLEHSSDHRLAWQYVETISRSFEP
IHATPDPRQTADGLWAANSRVIQRRRILTSIVALAGTGLFGWATWRHTPL
PGIVLAQMADHHTATGEQREVVLSDGTHVWLNTATALNEAYHASLRRLCL
ITGEILIDTATDPQRPFVVDTPQGRLRALGTRFTVRLESDKTFLGVYQGS
VEITSAAGTSSLIQAGQQTRFTTDASAAVEPADSARETWSRGVLVAWDMT
LGDVVKELRRYRSGYLGIAPEVAGLRVFGSFPLRDTDDTLTMLASALPIR
IQRTLPWWVSIEARTDADPHR
>NE2082 fleS, putative two-component sensor
MKTEVGVTPVADHEQLRQAFAVFSQASSQLSGIYRELQQQVFRLTEELAL
ANGELQRELAAKEALSQQLGQLLTALPGGVVVLDHQNSISRVNPAAIRLL
GEPLLGMTWQQIVQERLQPTGVAGEWHAGKEDLALFCPRRLYIESSVSEM
TGECILLLHDMTEAYALREQNRRNQRLAAMGEMAAGLAHQLRTPLSTALL
YAGHLSGEALDPQERKRFAVKAIERLHHLEHLIRNMLQFVKGEPVPAGRV
KLSVLLRKMQRVMAPQMQQRNLRFVVQDNSRGVSLNVDRAALSNAVANLL
DNAVQVSPVGSLVTLTCETTEDEARLIVSDEGPGIDPTLRERVFEPFFTT
RTEGTGLGLAIVHNLIQSMRGEIRIDSVPGTGTRFTISLPRTAKEFENVP
DLRSKAETAEK
>NE1329 glnE, putative glutamate-ammonia-ligase adenylyltransferase (glutamine-synthetase adenylyltransferase) protein
MSTPIDSSRAASIVASILPYSRYLKRTLASEPGLQQELLDQLPNPFLWEE
MLDFLQHPAISLEDEADLHRLLRQLRKRVILRLAARDLAGLADLNEVMTT
MTALADTTIRFALEFLHTAMTHPGHFGKPTGEKTGTEQQLLIVAMGKLGG
GELNVSSDVDLIFIYPEDGETDGRKSITNHEFFVRLGRKLIASLSDYTVD
GYVFRVDMRLRPHGENSPLAISLPMLEDYFITQGREWERHAWIKSRVITG
SSVAEATLMELIVRPFVFRKYLDFEAYEAMRSLHAQLRKEVDRRELHDNI
KLGPGGIREIEFITQVFQLIRGGRDADLCIRPTLGVLRRLRQKQPLPGQT
IEELTEAYCFLRKLEHRLQYLDDQQTQNLPQHPDEQTLIARSMGFTGYGD
FLDHLDLHRQNVTRHFEQIFAARRKSPRHDTFARIRPEQSGDHETVEAFS
KQLQTLGYLDPGKITARVRQFYDSTFFRQLTHSSQERIFELMPTLMEVIA
RFPPVDITLERILRLLEKIGQYPAYLALLQEHPQTLPRVAKLASVSQWAS
DYLGRHPILLDELLTSSGLHILPDWPALKTELTHQLHHVNIPKVQMVEWQ
MDVLRHFQHAQVFRLLVTDLEGDLLLEKLSDHLTELADLILDNVLQLAWQ
GLKKKHRELPAFAIIGYGKLGGKELGYASDLDIVFLYRDDHPDAASIYTK
LAQNINLWLTSHTSAGILYETDLRLRPNGTSGLLVNSIEAFTQYQYEQAW
VWEHQALTRARFVVGDREAGEMFEQMRKNMLCQPRDLVKLKREILMMRSK
MLEAHPNPTPLFDIKHDRGGIIDVEFIVQYLVLGYAHRYPQLTGNIGNIA
LLKLAGELGLTSAGKATAALTAYRELRRTQHQLRLSGTPEPAGTALSRDV
SQKFARVANNHLSDARQAVFQLWEDIFGT
>NE2131 phoB, possible phoB; Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding
MSATVLVVEDESAIQELIAYNLRNAGYTAVCTNSAEQAAAMVNEVLPDLV
LLDWMLPGKSGIELARSLRRDPRTKPIPVIMLTARVDERDKVIGLETGAD
DYVTKPFSPRELIARIKAVLRRSLPEASDEILDIGGVQINPMTHRVTVTD
LNDGTHEKELLLSPTEYRLLYFLMAHAERVHTRAQLLDRVWGDHVFVEDR
TVDVHIRRLRKALDVAGKADLVQTVRGAGYRFSTRGESEL
>NE1288 phoR, Sensory transduction histidine kinases
MNSFWLSLAPVLWLTIIAIPVGILFNAAIVFGLYSIILLGIVIYHIHTLY
CLEQWLHHSDLSYATVPDRSGLWGVVFARLARFVRRHDKERLGLNTSLER
LQRATSALPEGIVILGDKDQIEWCNSAAERHLGLNLEMDAGQHITRMVRQ
VRFVAYLDMGDFSKPFLLNQSRLRDVLLSIQIVPYGDREKLLISQDVTRF
EKIEIMRRDFVANVSHELRTPLTVIGGFLETLLEENKISGEMEKNALRLM
SDQAIRMRRLVEDLLTLSRLENAGNNLTEEQVDVVKLLQGLYQEAQSLSA
GRHVISLNLASHAMLLGSEDELRSAFENLISNAVRYTPESGIISLNWVVE
NGKGLFYVQDSGIGIEPNHIPRLTERFYRVDRSRSRETGGTGLGLAIVKH
VLNRHQASMEITSQPGAGSIFRIWFPSNRVLPAETAPVISSSPEHTKQNS
AA
>NE1836 pilG, Response regulator receiver domain
MTETANDLAGIKVMVVDDSNTIRRSAEIFLAHSGCEVILATDGFDAMAKV
IDCQPDIIFLDIVMPRLDGYQACMLIKKNPRYQSVPVIMLSSKSGLFDRA
RGRMVGSDEYLTKPFTKEALLDTVRKHTSHHRVPA
>NE1007 pilH, Response regulator receiver domain
MTVRTILVVDDSPTDRHIISGILIRSGYQVGVAESGEEGVIKAREIWPDL
VLMDVVMPGINGYQATRILARDGATRHIPVILCTTKDQQTDKIWGLRQGA
RDYITKPVVAAELLQKIAGLN
>NE1006 pilI, CheW-like domain
MTINAMPERQSSLTEQINKKAQETSATIPVLGITIGEDRWLIPMSNISEI
LPVPKITPVFLTQPWFLGVINVRGNVYGLCDLSHYLDNTSTCISAKNRVF
LTIPRLGVSYAMLAGSVLGIRNLMEFVPQSDHEDKRPVVAGIYKDRQDRL
WRMLNLPALLQLESFQRAGS
>NE1251 pilJ, Bacterial chemotaxis sensory transducer
MTGYNNANNMTVLLPVTRYLQIFRQSWFSGVLSVLFLSIALIMLRIDTQQ
ARTHTASLEIVGRIHANIQHLTIVSPEALRGNEQAFVQLRNNLDQLNHYA
TLLQYGGEYQRETLPAIAELLPADLFKTFRNTLHIKENRARQILESREAL
VSLAEILKRVDLVNHGLQKKLQEFSVELTQTGHASNQAVAVETVKILVQF
ITGSVRSLIEGGFQVSSTADQQSVESEQITGMIQTLIKGRDWLYSTVQGN
QLSSGTLSQIRVQFNALEDLLRVAQRLTPEVTGAWHAIHETFSASDSLST
LVSQIEQAITEHNNNAGMLTTVLFYLTAVLTIISGLVFIHLFSTSLRKHI
HQGEQNVETTQKAILRLLDEMEIPAGGDLTARMSVTEDITGTIADSINLT
IEALQELVRKVNHASSQVMSASHQAESISSDLLDATREQAGKIEDATVAV
LGIAESLEAVSGSAEECADVARQTLHAAESGANAVQDAMAGMNEIRVYIQ
ETSKRIKRLGESSQEIGEIVTLISDITEQTNILALNASIQATAAGDAGKG
FSVIAQEIQRLAEHSAEATRQISTLIRNIRGDAQDTIIAMERSTAGVVEG
ARRANTTGSALEEIETVSKRLAQLVIRITEATHKQTRVSNKVAKSMEDIL
SITRQTSRGTQQNADSIKQITEHVTDLKSSVASFKV
>NE1785 pt, Low molecular weight phosphotyrosine protein phosphatase
MKHSEAEKVGVLFVCMGNICRSPTADAVFNHHVKSARLEHLFHIDSAGTH
AYHIGEPPDRRSQQAALRRGYNMQSLRARRVVPEDFSRFQYILAMDRHNL
EELQQNCPSRYTSRLGMFLQYSNQWDIRQEIPDPYYGGSHGFERVLDLVE
NASQGLLKYILENLNT
>NE0060 ptsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
MNLIAQLLPESNIIIDLDATSKKRVFEQVGLLFENTLHIARSQVFDSLFA
REKLGSTGLGQGVAIPHGRIKGLREAAAALVRMKEAIPFDAPDGLPVSIA
CILLVPEKATDQHLLILSELAQMFSNKNFREKLLHGRDAKEIHQLISDWV
PEHVPG
>NE0368 spoT, spoT; bifunctional enzyme (p)ppgpp synthetase II and guanosine-3',5'-bisdiphosphate 3'-pyro
MQNPILNDSDDSAVISPEAELLISEVSQYLKPEDLALLKSAYFFSQKAHS
GQFRKSGEPYISHPITVARILGELRLDAVTLTAALLHDVVEDTGILKQEI
SERFGSSVAELVDGVSKLDKIRFQTQADMQAENFRKMLLAMAQDVRVILI
KLADRLHNMRTLEVMSPEKQHRIAQETLEIYAPIAHRLGLENIYQELQEL
GFCFSYPTRYKVLLKATKAARGNRREVVGKILDAIKQRLQEAELDAVVTG
REKHLYSIYKKMAEKHLSFSDVLDIYGFRVIVRDVSSCYVALGALHSLYK
PIPGKFKDYIAIPKPNGYQSLHSTLLGPYGLPIEIQIRTHEMHHIAEAGV
ASHWLYKSKNTDAGIDDLHMKANQWMKGLLETLNDSSDSLEFLEHLKVDL
FPGEVYVFTPQGKILTLPRGATVVDFAYAVHTDVGNCCVAARINGEITPL
RTRLKSGDRVEIITAPAAKPNPIWLSYVATGRARSSIRYFLRTIQYNESV
KLGERLLNQALHSFGVNPDAIEPSQWEKLVKESKAKSKEALLADIALGKQ
LAAVLAKRLAVPGESVSNIQSNNSITILGTEGMAVKFARCCHPIPGDGIV
GLIKKDQGLVIHMQDCPAVIRIKDHKNMENQLDVVWGTDIDRTFPVSIFM
TVVNKSGVLARVTAEIAKADSNIDDITLENDKDYTTMRFILQTRDRQHLA
QIFRRLKHIDEIVKMGRIKNL
>NE0344 tctD, possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding
MRILVVEDDSLVASGIKQGLTNAGYTVDVARNAASAERHLREENFDLAVV
DIGLPDIDGLTLVQRLRHRKMCLPVLVLTARGSMEDTIAGLDIGADDYMT
KPFRLPELIARIRALIRRAHSITSTELQHDRLVLNTGSYTATLNDQPLLL
TRREWTILETLLMASPRVVSKDKLLQNLTGWDKNITPNAIEVHVSRLRAK
IAPGGIEIRTVRGIGYRIDQSHS
>NE2554 typA, GTP-binding elongation factor:Elongation factor Tu domain 2
MTRLLRNIAIIAHVDHGKTTMVDKLLHQAGTFAAHQTVAERVMDSDDIER
ERGITIFSKNCAIDYAGVHINIVDTPGHADFGGEVERVLSMVDGVLLLVD
AVEGPMPQTRFVTRKALASGLRPIVVVNKIDRPGARPDWVVNQTFDLFDK
LNATEEQLDFPVVYASALNGYATLDANQPGSDMRPLFDMILKHVPAPVGD
PDQPLQLQISALDYSSFVGRLGIGRINRGRLKPGQEVMVLTGERAPKKAR
VNQVSGFRGLDRIQLSEAAAGDIVLISGIEELGIGTTLADIDHPEALPMP
VVDEPTLSMNFQVNTSPFAGKEGKFVTSRQLRERLEKELLTNVALRLEET
GETDSFLVSGRGELHLTILLENMRREGYELAVSRPKVVIREIDGEKCEPF
EVLTVDIDEANQGAVMEALGTRRGDLLDMVTDGRGRVRLDYRIPARGLIG
FQSEFMTLTRGTGIMSHVFDEYAPMRPDMASRKNGVLISAEMGEAVAYAL
WKLQERGRMFVSPGEPLYEGMVIGIHSRENDLVVNPIKGKQLTNIRASGH
DEAVVLTPPIQLTLESAIEFIADDELVEITPKSIRIRKRFLLEHERKRAS
RSAA
>NE0017 yfhA, putative transcriptional regulator of two-component regulator protein
MIQDKKILLVDDDRDLLELLSIRLTAAGYETTLADSTEAAINYLDISRPH
LVISDMQMGGLDGMALFEYIHRNIPTLPVIILTAYGTIPDAVAATQRGIF
GYLTKPYDPKILLGQVERALNLAPAVETLSSTTPVSSWRKTIVTRSAVME
DLLAKVGRVAQGDASVLLSGESGVGKELLARAIHQASRRCDQPFVTINCA
AIPEQLLESELFGHAKGAFTGAVRDHKGLFQLADGGSLFLDEIGDMPLLL
QAKLLHALQERVIRPVGSTQSIPINVRIISATHRDLKSEIQAGNFREDLY
YRLFVVGLTIPSLAQRSEDIPLLANHFLRVFAEKHQKDINVFSPEAISFL
LASSWPGNIRQLMNVVEQSVVMSAVPLISGELVRDAMHKDEEQMTSFDEA
RRQFERDYLVKILKITAGNVTQAAKLAKRNRTEFYKLLQRHQLDFTLYKS
LQEKV
>NE0015 yfhK, Sensory transduction histidine kinases
MKISTDAVSPEQTRRKTGSGYKPKSFLALILIGFSIVGLPLIGALVYSAV
RIDQLSEQSRHNVYQATQITNGTSVIIGEIMAMQRSVQHALVLDDASLLE
GYFLAHTKFENITNHLSVISLYPEQRLPLEKLRLLETSLFKEILNLNEYP
QELQYLLERFAGLLTLAQEFSTNSFRMIGENVGSMSEIATQTRSLVEWEL
LILVPLVIFLALAFSVFIARPIRQIDEAIAQMGRGRLSRPIQVNGPQNLV
YIGERLDWLRQRLLKLEDQKMQFFRHISHELKTPLTAIREGADLLAEGIT
GNLNRKQQLIAGILHTSSMQLQKRIEDLLNFSALQAEIITLVKQSVKLEK
IINSAIQAQNLSILSKNLKISLNCPELSLECDKQKLDIILDNLLSNAVKF
SPVGGLIEITASYHENRAQIDMTDSGPGVDDSDGSRIFEPFYQGHNTPES
HVRGTGLGLAIAKEYAIAHGGNIELIRNTGKRGAHFRLTLPINSSESTT
>NE2292 yxiE,n17E, Universal stress protein (Usp)
MLKMLLPVDGSEASGRAIEEFVKRLDWYREKPEIHLLNVRMPLTGNVSMF
VSKEEIGDYYREEGLRNLQQARGYLEEKGVAYRHHIVVGEVVTMILQFAE
EIQCDQVVIGPRGLGAVKGLLLGSVASKLIQLSTVPVLLLK