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2024-04-27 14:52:12

Gene list

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COG category: Signal transduction mechanisms
Organism: Lactobacillus plantarum WCFS1, WCFS1

Number of genes found: 103

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus plantarum WCFS1, WCFS1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
agrA lp_3580 response regulator; accesory gene regulator protein Achromosome CDS3196309 744 - 0.36828
agrB lp_3582 accesory gene regulator protein Bchromosome CDS3198422 603 - 0.348259
agrC lp_3581 histidine protein kinase; sensor proteinchromosome CDS3197045 1260 - 0.31746
arsC lp_0059 arsenate reductasechromosome CDS58868 426 + 0.502347
chpA lp_2882 cell growth regulatory proteinchromosome CDS2564088 348 - 0.431034
glnH1 lp_0881 glutamine ABC transporter, substrate binding proteinchromosome CDS812631 837 + 0.471924
glnH2 lp_2312 glutamine ABC transporter, substrate binding proteinchromosome CDS2088513 840 - 0.427381
glnPH1 lp_0802 glutamine ABC transporter, substrate binding and permease proteinchromosome CDS743457 1437 + 0.442589
glnPH2 lp_2111 glutamine ABC transporter, substrate binding and permease proteinchromosome CDS1906219 1524 - 0.427822
hpk1 lp_0037 histidine protein kinase; sensor proteinchromosome CDS38491 1875 + 0.432
hpk10 lp_3088 histidine protein kinase; sensor proteinchromosome CDS2748060 1251 - 0.422862
hpk11 lp_3190 histidine protein kinase; sensor proteinchromosome CDS2842945 1161 - 0.419466
hpk12 lp_3639 histidine protein kinase; sensor proteinchromosome CDS3256641 1713 - 0.430823
hpk2 lp_0282 histidine protein kinase; sensor proteinchromosome CDS255805 1377 - 0.470588
hpk3 lp_0744 histidine protein kinase; sensor proteinchromosome CDS681237 1404 + 0.465812
hpk4 lp_1488 histidine protein kinase; sensor protein (putative)chromosome CDS1361801 1032 - 0.439922
hpk5 lp_1545 histidine protein kinase; sensor proteinchromosome CDS1411040 1644 + 0.458029
hpk6 lp_1943 histidine protein kinase; sensor proteinchromosome CDS1761554 1104 - 0.462862
hpk7 lp_2505 histidine protein kinase; sensor proteinchromosome CDS2237727 1524 - 0.441601
hpk9 lp_3063 histidine protein kinase; sensor proteinchromosome CDS2725199 1269 - 0.405831
hprK lp_0754 bifunctional protein: HPr kinase; P-ser-HPr phosphatasechromosome CDS688895 948 + 0.448312
lexA lp_2063 transcription repressor of the SOS regulonchromosome CDS1863769 633 + 0.459716
lon lp_2132 endopeptidase La (putative)chromosome CDS1924968 1047 - 0.477555
lp_0012 lp_0012 exopolyphosphatase-related protein (putative)chromosome CDS11254 2013 + 0.443616
lp_0063 lp_0063 unknownchromosome CDS62200 1536 + 0.459635
lp_0103 lp_0103 transcription regulatorchromosome CDS92098 666 - 0.406907
lp_0126 lp_0126 stress-responsive transcription regulator (putative)chromosome CDS113390 195 - 0.430769
lp_0131 lp_0131 unknownchromosome CDS115946 507 - 0.420118
lp_0524 lp_0524 unknownchromosome CDS469802 393 + 0.46056
lp_0557 lp_0557 unknownchromosome CDS513299 843 + 0.493476
lp_0585 lp_0585 transcription regulatorchromosome CDS558254 2874 + 0.461726
lp_0752 lp_0752 stress-responsive transcription regulator (putative)chromosome CDS688051 312 + 0.410256
lp_0758 lp_0758 protein containing diguanylate cyclase/phosphodiesterase domain 2 (EAL)chromosome CDS692805 681 - 0.417034
lp_0765 lp_0765 protein containing diguanylate cyclase/phosphodiesterase domain 2 (EAL)chromosome CDS699681 711 - 0.407876
lp_0823 lp_0823 protein containing diguanylate cyclase/phosphodiesterase domain 2 (EAL)chromosome CDS763644 672 + 0.418155
lp_1163 lp_1163 nucleotide-binding protein, universal stress protein UspA familychromosome CDS1061899 441 - 0.539683
lp_1293 lp_1293 unknownchromosome CDS1180306 837 - 0.505376
lp_1322 lp_1322 unknownchromosome CDS1218080 507 + 0.493097
lp_1396 lp_1396 transcription regulator levR (putative)chromosome CDS1278797 2556 + 0.459311
lp_1442 lp_1442 transcription regulatorchromosome CDS1319557 642 + 0.428349
lp_1453 lp_1453 unknownchromosome CDS1330508 342 - 0.429825
lp_1565 lp_1565 unknownchromosome CDS1430648 456 - 0.47807
lp_1694 lp_1694 unknownchromosome CDS1542481 339 - 0.365782
lp_1701 lp_1701 unknownchromosome CDS1547457 459 - 0.420479
lp_1747 lp_1747 unknownchromosome CDS1584929 501 + 0.453094
lp_2330 lp_2330 signaling protein containing GAF domain (putative)chromosome CDS2107392 462 + 0.495671
lp_2340 lp_2340 unknownchromosome CDS2115699 483 + 0.449275
lp_2508 lp_2508 unknownchromosome CDS2241701 402 - 0.410448
lp_2524 lp_2524 protein containing diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)chromosome CDS2251207 1191 + 0.445844
lp_2652 lp_2652 unknownchromosome CDS2358904 462 + 0.469697
lp_2714 lp_2714 protein containing diguanylate cyclase/phosphodiesterase domain 2 (EAL)chromosome CDS2414939 825 + 0.442424
lp_2745 lp_2745 unknownchromosome CDS2442970 471 - 0.430998
lp_2877 lp_2877 unknownchromosome CDS2561105 444 - 0.488739
lp_2929 lp_2929 protein containing diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)chromosome CDS2609079 1131 - 0.440318
lp_2930 lp_2930 protein containing diguanylate cyclase/phosphodiesterase domain 2 (EAL)chromosome CDS2610225 681 - 0.427313
lp_2993 lp_2993 unknownchromosome CDS2663607 432 + 0.439815
lp_3003 lp_3003 unknownchromosome CDS2673334 837 - 0.494624
lp_3021 lp_3021 protein containing diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)chromosome CDS2687548 1137 + 0.445031
lp_3060 lp_3060 transcription regulatorchromosome CDS2723819 762 - 0.419948
lp_3138 lp_3138 transcription regulatorchromosome CDS2807647 2124 - 0.370527
lp_3209 lp_3209 amino acid ABC transporter, substrate binding proteinchromosome CDS2860144 804 + 0.426617
lp_3214 lp_3214 amino acid ABC transporter, substrate binding proteinchromosome CDS2862968 816 + 0.449755
lp_3275 lp_3275 unknownchromosome CDS2915770 483 - 0.391304
lp_3385 lp_3385 prophage Lp4 protein 5chromosome CDS3003473 429 - 0.400932
lp_3423 lp_3423 unknownchromosome CDS3038854 372 + 0.376344
lp_3444 lp_3444 transcription regulatorchromosome CDS3052232 666 + 0.463964
lp_3542 lp_3542 multidomain proteinchromosome CDS3161033 459 - 0.3878
lp_3543 lp_3543 multidomain proteinchromosome CDS3161662 2052 + 0.371345
lp_3650 lp_3650 regulatorchromosome CDS3272384 867 + 0.432526
lp_3663 lp_3663 unknownchromosome CDS3285503 462 - 0.4329
luxS lp_0774 autoinducer production proteinchromosome CDS710128 477 + 0.425577
mecA lp_2227 negative regulator of competencechromosome CDS2010408 732 - 0.389344
orf39 hypothetical proteinpWCFS103 CDS30856 210 + 0.304762
phoH lp_1970 phosphate starvation-inducible proteinchromosome CDS1783478 978 - 0.461145
pkn2 lp_3176 serine/threonine protein kinasechromosome CDS2834878 1107 - 0.474255
plnB lp_0416 histidine protein kinase PlnB; sensor proteinchromosome CDS371705 1329 + 0.328066
plnC lp_0417 response regulator PlnC, activatorchromosome CDS373034 744 + 0.326613
plnD lp_0418 response regulator PlnD, repressorchromosome CDS373896 744 + 0.373656
pltK lp_1355 histidine protein kinase; sensor proteinchromosome CDS1243904 1263 + 0.424386
pltR lp_1356 response regulatorchromosome CDS1245172 768 + 0.427083
pppL lp_1618 serine/threonine specific protein phosphatase (putative)chromosome CDS1472576 747 + 0.465863
ptp1 lp_0069 protein-tyrosine phosphatasechromosome CDS67605 747 + 0.45917
ptp2 lp_3272 protein-tyrosine phosphatasechromosome CDS2912856 786 + 0.487277
ptp3 lp_2735 protein-tyrosine phosphatase (putative)chromosome CDS2433703 804 - 0.458955
pts31A lp_3519 PTS, EIIAchromosome CDS3134643 444 - 0.364865
pts35A lp_3548 galacitol PTS, EIIAchromosome CDS3167358 471 - 0.367304
pts36A lp_3599 galactitol PTS, EIIAchromosome CDS3217253 462 + 0.378788
pucR lp_2708 purine transport regulatorchromosome CDS2408787 1590 + 0.440881
relA lp_1987 GTP pyrophosphokinasechromosome CDS1798397 2268 - 0.458554
rrp1 lp_0036 response regulatorchromosome CDS37770 708 + 0.457627
rrp10 lp_3087 response regulatorchromosome CDS2747309 747 - 0.404284
rrp11 lp_3191 response regulatorchromosome CDS2844122 690 - 0.407246
rrp12 lp_3638 response regulatorchromosome CDS3255181 1461 - 0.422998
rrp2 lp_0283 response regulatorchromosome CDS257168 705 - 0.453901
rrp3 lp_0743 response regulatorchromosome CDS680516 729 + 0.465021
rrp4 lp_1487 response regulatorchromosome CDS1361115 654 - 0.43578
rrp5 lp_1544 response regulatorchromosome CDS1410354 687 + 0.42067
rrp6 lp_1942 response regulatorchromosome CDS1760939 606 - 0.462046
rrp7 lp_2506 response regulatorchromosome CDS2239247 729 - 0.447188
rrp8 lp_2665 response regulatorchromosome CDS2369371 750 - 0.426667
srlR2 lp_3656 sorbitol operon transcription regulatorchromosome CDS3276010 1866 - 0.344587
tspO lp_1700 sensory proteinchromosome CDS1546944 486 - 0.45679
typA lp_2146 GTP-binding protein TypAchromosome CDS1938778 1839 - 0.436107