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2024-05-06 00:21:38

Gene list

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COG category: Signal transduction mechanisms
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

Number of genes found: 185

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Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
HCM1.227c hypothetical proteinpHCM1 CDS170658 708 - 0.635593
HCM1.91c hypothetical proteinpHCM1 CDS60924 972 - 0.445473
HCM2.0026c putative PhoH-like proteinpHCM2 CDS19116 834 - 0.526379
HCM2.0100c hypothetical proteinpHCM2 CDS79214 642 - 0.538941
STY0035 putative membrane proteinchromosome CDS32549 450 - 0.368889
STY0095 probable secreted proteinchromosome CDS94586 291 - 0.474227
STY0103 bis(5'-nucleosyl)-tetraphosphatasechromosome CDS101228 849 - 0.55477
STY0211 dosage-dependent dnaK suppressor proteinchromosome CDS220806 456 - 0.532895
STY0232 conserved hypothetical proteinchromosome CDS243080 1158 + 0.544905
STY0352 probable secreted proteinchromosome CDS360350 408 - 0.465686
STY0376 putative rtn proteinchromosome CDS386985 1575 + 0.48254
STY0432 phosphate regulon transcriptional regulatory protein PhoBchromosome CDS442289 690 + 0.547826
STY0433 phosphate regulon sensor protein PhoRchromosome CDS443048 1296 + 0.535494
STY0488 BolA proteinchromosome CDS493149 318 + 0.490566
STY0599 hypothetical proteinchromosome CDS604191 312 - 0.439103
STY0703 putative sigma-54 dependent transcriptional regulatorchromosome CDS699294 1929 + 0.498186
STY0710 ABC transporter periplasmic binding protein (glutamate/aspartate?)chromosome CDS705590 927 - 0.511327
STY0715 PhoH-like ATP-binding proteinchromosome CDS709980 1086 - 0.538674
STY0743 KDP operon transcriptional regulatory proteinchromosome CDS742195 678 - 0.564897
STY0744 sensor protein KdpDchromosome CDS742869 2709 - 0.586932
STY0868 glutamine-binding periplasmic protein precursorchromosome CDS860063 747 - 0.488621
STY0920 arginine-binding periplasmic protein 2 precursorchromosome CDS912359 732 - 0.487705
STY0923 arginine-binding periplasmic protein 1 precursorchromosome CDS914718 732 - 0.516393
STY1045 putative bacteriophage proteinchromosome CDS1028101 261 + 0.421456
STY1162 PhoH protein (phosphate starvation-inducible protein PsiH)chromosome CDS1124406 855 + 0.507602
STY1270 sensor protein PhoQ, regulator of virulence determinantschromosome CDS1226711 1464 - 0.518443
STY1271 transcriptional regulatory protein PhoP, regulator of virulence determinantschromosome CDS1228174 675 - 0.512593
STY1285 nitrate/nitrite response regulator protein NarLchromosome CDS1239520 651 - 0.533026
STY1286 nitrate/nitrite sensor protein NarXchromosome CDS1240163 1797 - 0.541458
STY1297 putative regulatory proteinchromosome CDS1255747 1014 + 0.510848
STY1349 conserved hypothetical proteinchromosome CDS1307186 1983 - 0.505799
STY1354 conserved hypothetical proteinchromosome CDS1316029 708 + 0.492938
STY1370 psp operon transcriptional activator PspFchromosome CDS1326223 981 - 0.545362
STY1371 phage shock protein Achromosome CDS1327374 669 + 0.512706
STY1373 phage shock protein Cchromosome CDS1328326 360 + 0.522222
STY1403 conserved hypothetical proteinchromosome CDS1354289 948 - 0.516878
STY1404 fumarate and nitrate reduction regulatory proteinchromosome CDS1355387 795 - 0.493082
STY1408 putative chemo-receptor proteinchromosome CDS1358082 1155 + 0.490909
STY1416 conserved hypothetical proteinchromosome CDS1366390 435 - 0.482759
STY1438 putative periplasmic amino acid-binding proteinchromosome CDS1389041 762 - 0.389764
STY1448 putative phosphotransferase enzymechromosome CDS1399786 438 - 0.570776
STY1614 hypothetical proteinchromosome CDS1549845 546 + 0.587912
STY1647 putative two-component response regulatorchromosome CDS1575105 732 + 0.530055
STY1651 two component sensor kinasechromosome CDS1579435 1305 + 0.536398
STY1766 conserved hypothetical proteinchromosome CDS1689176 714 - 0.457983
STY1805 putative exported proteinchromosome CDS1724211 486 - 0.493827
STY1831 conserved hypothetical proteinchromosome CDS1749484 1935 + 0.505426
STY1856 putative regulatory proteinchromosome CDS1765843 594 - 0.367003
STY1957 conserved hypothetical proteinchromosome CDS1846482 1602 + 0.532459
STY1978 conserved hypothetical proteinchromosome CDS1865584 585 - 0.509402
STY2005 conserved hypothetical proteinchromosome CDS1885617 1131 + 0.498674
STY2043 putative bacteriophage proteinchromosome CDS1912209 393 - 0.475827
STY2124 chemotaxis protein CheZchromosome CDS1976588 645 - 0.578295
STY2125 chemotaxis protein CheYchromosome CDS1977243 390 - 0.512821
STY2126 protein-glutamate methylesterasechromosome CDS1977650 1050 - 0.55619
STY2127 chemotaxis protein methyltransferasechromosome CDS1978696 867 - 0.524798
STY2128 methyl-accepting chemotaxis protein IIchromosome CDS1979723 1662 - 0.556558
STY2129 purine binding chemotaxis proteinchromosome CDS1981621 504 - 0.529762
STY2130 chemotaxis protein CheAchromosome CDS1982145 2016 - 0.549603
STY2136 conserved hypothetical proteinchromosome CDS1987824 396 + 0.515152
STY2190 colanic acid capsullar biosynthesis activation protein Achromosome CDS2031045 624 + 0.386218
STY2194 putative membrane proteinchromosome CDS2033361 1704 - 0.531103
STY2206 UmuD proteinchromosome CDS2044752 420 - 0.5
STY2336 putative membrane proteinchromosome CDS2166493 2991 + 0.541291
STY2343 putative two-component system sensor kinasechromosome CDS2181100 1404 + 0.568376
STY2344 putative two-component system response regulatorchromosome CDS2182500 723 + 0.532503
STY2351 putative exported proteinchromosome CDS2189209 444 - 0.36036
STY2388 putative two-component system response regulatorchromosome CDS2219326 720 - 0.505556
STY2389 putative two-component system sensor kinasechromosome CDS2220042 1686 - 0.527283
STY2472 nitrate/nitrite response regulator protein NarPchromosome CDS2303653 648 + 0.524691
STY2494 putative two-component system sensor kinasechromosome CDS2324258 2670 + 0.515356
STY2495 regulator of capsule synthesis B componentchromosome CDS2326944 651 + 0.493088
STY2545 putative receptor/regulator proteinchromosome CDS2378234 1005 + 0.514428
STY2574 putative sugar phosphotransferase component II Achromosome CDS2411709 444 - 0.5
STY2584 histidine-binding periplasmic proteinchromosome CDS2419511 783 - 0.518519
STY2585 lysine-arginine-ornithine-binding periplasmic protein precursorchromosome CDS2420531 783 - 0.512133
STY2591 putative transcriptional regulatorchromosome CDS2427893 1428 + 0.521709
STY2619 phosphohistidine phosphatasechromosome CDS2452380 486 - 0.545267
STY2651 putative membrane proteinchromosome CDS2487168 2190 - 0.509589
STY2718 nitrate/nitrite sensor protein NarQchromosome CDS2551867 1701 + 0.537331
STY2744 putative membrane proteinchromosome CDS2582300 2214 - 0.473351
STY2809 putative transcriptional regulatorchromosome CDS2668161 1338 - 0.554559
STY2811 putative sensor kinase proteinchromosome CDS2670261 1386 - 0.546898
STY2830 sigma-E factor regulatory protein RseCchromosome CDS2692917 480 - 0.579167
STY2831 sigma-E factor regulatory protein RseB precursorchromosome CDS2693393 957 - 0.546499
STY2832 sigma-E factor negative regulatory proteinchromosome CDS2694349 651 - 0.542243
STY2859 putative membrane proteinchromosome CDS2729376 1221 + 0.498771
STY2961 putative sigma-54-dependent transriptional regulatorchromosome CDS2836255 1521 - 0.594346
STY3030 possible serine/threonine protein phosphatasechromosome CDS2899240 657 + 0.414003
STY3096 sensor proteinchromosome CDS2962058 2757 + 0.529198
STY3144 phosphoenolpyruvate-protein phosphotransferasechromosome CDS3016154 2247 - 0.569203
STY3309 hypothetical proteinchromosome CDS3156513 1056 - 0.427083
STY3354 probable two-component system response regulator.chromosome CDS3198301 660 + 0.554545
STY3355 probable two-component system sensor histidine kinasechromosome CDS3198957 1350 + 0.566667
STY3380 adenyl-transferasechromosome CDS3221541 2844 - 0.57384
STY3382 putative membrane proteinchromosome CDS3226045 615 + 0.505691
STY3395 aerotaxis receptor proteinchromosome CDS3240258 1521 - 0.557528
STY3441 PTS system, galactitol-specific IIA componentchromosome CDS3285273 465 + 0.539785
STY3507 aerobic respiration control sensor proteinchromosome CDS3345014 2337 - 0.51733
STY3555 putative lipoproteinchromosome CDS3398469 1941 - 0.535291
STY3568 putative exported proteinchromosome CDS3411528 1611 + 0.555556
STY3645 hypothetical proteinchromosome CDS3503465 429 - 0.482517
STY3666 hypothetical proteinchromosome CDS3519440 228 + 0.565789
STY3711 transcriptional regulatory proteinchromosome CDS3561370 1326 - 0.555807
STY3712 two-component system sensor proteinchromosome CDS3562701 1398 - 0.545064
STY3811 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3674335 501 - 0.506986
STY3812 two-component response regulatory proteinchromosome CDS3674986 699 + 0.546495
STY3813 two-component sensor kinase proteinchromosome CDS3675681 1374 + 0.572052
STY3871 GTP-binding proteinchromosome CDS3726120 1824 - 0.540022
STY3875 Two-component system sensory histidine kinasechromosome CDS3730003 1050 + 0.571429
STY3876 Two-component system, response regulatorchromosome CDS3731061 1410 + 0.560993
STY3951 Two-component sensor protein histidine protein kinase.chromosome CDS3819535 2736 - 0.544225
STY3992 Two-component system response regulator proteinchromosome CDS3857652 591 + 0.590525
STY3993 two-component system sensor histidine kinasechromosome CDS3858242 1503 + 0.619428
STY3998 hypothetical proteinchromosome CDS3864375 381 + 0.464567
STY4188 conserved hypothetical proteinchromosome CDS4049730 1974 + 0.551165
STY4192 conserved hypothetical proteinchromosome CDS4056066 768 + 0.53125
STY4197 hypothetical luxR-family transcriptional regulatorchromosome CDS4063347 603 + 0.477612
STY4212 universal stress protein Achromosome CDS4078877 435 - 0.510345
STY4234 methyl-accepting chemotaxis citrate transducerchromosome CDS4099515 1644 - 0.555353
STY4403 isocitrate dehydrogenase kinase/phosphatasechromosome CDS4267775 1782 + 0.530864
STY4433 LexA repressorchromosome CDS4304371 609 + 0.545156
STY4462 putative exported proteinchromosome CDS4347506 1602 + 0.475031
STY4577 hypothetical proteinchromosome CDS4454829 1431 + 0.518519
STY4618 putative regulatory proteinchromosome CDS4488213 426 - 0.619718
STY4626 putative capsid proteinchromosome CDS4492225 834 - 0.586331
STY4638 hypothetical proteinchromosome CDS4503667 228 - 0.578947
STY4822 protein kinasechromosome CDS4685181 1077 - 0.363045
STY4823 protein kinasechromosome CDS4686254 1074 - 0.349162
STY4824 hypothetical proteinchromosome CDS4687302 1164 - 0.37457
STY4900 conserved hypothetical regulatory proteinchromosome CDS4762682 726 + 0.435262
STY4901 conserved hypothetical regulatory proteinchromosome CDS4763416 627 + 0.497608
STY4904 putative membrane proteinchromosome CDS4765611 1065 - 0.498592
STY4935 putative two-component response regulatorchromosome CDS4795846 690 + 0.57971
STY4945 putative transcriptional regulator proteinchromosome CDS4805344 672 - 0.431548
adrA adrA proteinchromosome CDS429630 1113 + 0.551662
arcA global response regulatorchromosome CDS4806975 717 - 0.521618
artJ probable arginine-binding periplasmic proteinchromosome CDS4571986 720 - 0.494444
cheM methyl-accepting chemotaxis protein IIchromosome CDS3238302 1569 - 0.500319
citA sensor kinase citachromosome CDS61791 1620 - 0.477778
citB transcriptional regulatory protein citbchromosome CDS61103 687 - 0.484716
copR response regulatorchromosome CDS1094093 747 - 0.502008
copS histidine kinasechromosome CDS1092736 1365 - 0.515018
creC putative two-component sensor kinasechromosome CDS4796535 1425 + 0.582456
crp cyclic AMP receptor protein,catabolite gene activatorchromosome CDS4213325 633 - 0.505529
csrA carbon storage regulatorchromosome CDS2823850 186 - 0.510753
cstA carbon starvation protein Achromosome CDS645392 2106 + 0.569326
cstA probable carbon starvation proteinchromosome CDS4751918 2151 - 0.574152
dcuR two-component response regulatorchromosome CDS4394294 720 - 0.490278
dcuS two-component sensor kinasechromosome CDS4395010 1632 - 0.530637
dpiA transcriptional regulatory protein dpia; transcriptional regulator CriRchromosome CDS674421 681 + 0.53304
dpiB sensor kinase DpiBchromosome CDS672791 1662 + 0.518652
ecnR transcriptional regulatory proteinchromosome CDS4557150 588 - 0.462585
envZ two-component sensor kinase EnvZchromosome CDS4170982 1353 + 0.574279
fimZ probable transcriptional regulator (FimXZ protein)chromosome CDS602214 633 - 0.407583
fliY cystine-binding periplasmic protein precursorchromosome CDS2007417 801 - 0.515606
luxS autoinducer-2 production protein LuxSchromosome CDS2819165 516 - 0.532946
mucA putative DNA-repair modulatorpHCM1 CDS185798 435 + 0.521839
ompR two-component response regulator OmpRchromosome CDS4170266 720 + 0.565278
pgtA phosphoglycerate transport system transcriptional regulatory protein PgtAchromosome CDS2467198 1248 - 0.519231
pgtB phosphoglycerate transport system sensor protein PgtBchromosome CDS2468435 2007 - 0.539611
pmrA two-component response regulatorchromosome CDS4378837 669 - 0.539611
pmrB two-component sensor kinasechromosome CDS4377757 1080 - 0.552778
pphA serine/threonine protein phosphatase 1chromosome CDS1872287 651 - 0.52381
proP ProP effectorchromosome CDS1864800 687 - 0.535662
prpR propionate catabolism operon regulatory proteinchromosome CDS407663 1626 - 0.555351
ptsN nitrogen regulatory IIA proteinchromosome CDS3340797 492 + 0.530488
rcsC sensor protein RcsCchromosome CDS2327697 2847 - 0.533895
relA GTP pyrophosphokinasechromosome CDS2958419 2235 - 0.5566
rtn rtn proteinchromosome CDS2280943 1557 + 0.518947
sgaA probable sugar phosphotransferasechromosome CDS4602503 465 + 0.539785
sipB pathogenicity island 1 effector proteinchromosome CDS2881114 1782 - 0.523008
sirA invasion response-regulatorchromosome CDS2002473 657 - 0.512938
spoT guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156chromosome CDS3912117 2112 - 0.536458
sseB putative pathogenicity island effector effector proteinchromosome CDS1642206 591 - 0.431472
ssrA putative two-component sensor kinasechromosome CDS1647071 2763 + 0.420557
ssrB putative two-component response regulatorchromosome CDS1649864 639 + 0.402191
stpA tyrosine phosphatase (associated with virulence)chromosome CDS2874081 1632 - 0.436274
tctD transcriptional regulatorchromosome CDS2786824 675 - 0.548148
tctE putative two-component system sensor kinasechromosome CDS2785422 1416 - 0.561441
ttrR putative two-component response regulatorchromosome CDS1652946 621 - 0.553945
wzb putative protein-tyrosine phosphatasechromosome CDS2159020 450 - 0.571111
ybdQ conserved hypothetical proteinchromosome CDS662201 429 - 0.515152
ybiI hypothetical Zinc-finger containing proteinchromosome CDS854809 267 - 0.509363
ylaB hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence; putative exported proteinchromosome CDS517438 1551 - 0.520954