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2024-05-04 14:26:14

Gene list

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COG category: Signal transduction mechanisms
Organism: Idiomarina loihiensis L2TR, L2TR

Number of genes found: 169

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA IL0895 Phosphohistidine phosphatase SixAchromosome CDS953461 483 - 0.496894
NA IL0065 Predicted transcription negative regulatorchromosome CDS68135 648 - 0.487654
NA IL1285 Uncharacterized conserved secreted or membrane proteinchromosome CDS1381554 1746 + 0.443872
NA IL2456 Signaling protein with DMT-family integral membrane sensor domain, GGDEF and EAL domainschromosome CDS2627993 2073 + 0.480463
NA IL1880 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2011364 1692 + 0.478723
NA IL0756 DnaK suppressor proteinchromosome CDS815669 267 - 0.52809
NA IL1421 Methyl-accepting chemotaxis proteinchromosome CDS1529845 1992 + 0.433233
NA IL2150 Probable transcriptional activator of acetoin/glycerol metabolismchromosome CDS2286396 1512 - 0.469577
NA IL0314 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS323304 597 + 0.460637
NA IL1090 Signaling protein with a periplasmic binding domain and GGDEF domainchromosome CDS1174714 1431 - 0.45283
NA IL1408 NtrC family transcriptional regulatorchromosome CDS1509939 1377 - 0.452433
NA IL0510 Chemotaxis response regulatorchromosome CDS535523 1023 + 0.518084
NA IL2153 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS2291989 651 - 0.451613
NA IL1149 Chemotaxis protein CheVchromosome CDS1228978 936 - 0.441239
NA IL0688 Uncharacterized periplasmic substrate-binding proteinchromosome CDS743401 843 + 0.45433
NA IL2267 Signaling protein (CHEY,EAL,GGDEF domains)chromosome CDS2424438 2214 - 0.443541
NA IL0147 Intracellular signaling protein (EAL-mHD-GYP)chromosome CDS156958 1203 + 0.468828
NA IL0166 Response regulator with a Fis-type DNA-binding domain (CheY, Fis domains)chromosome CDS176538 522 - 0.480843
NA IL2120 Signal transduction histidine kinasechromosome CDS2256356 1734 + 0.470588
NA IL0500 Signalling protein containing EAL domainchromosome CDS525603 735 + 0.466667
NA IL2429 Uncharacterized protein, containing periplasmic binding domainchromosome CDS2602284 1287 + 0.469308
NA IL2344 Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains)chromosome CDS2515273 2301 - 0.452412
NA IL0880 Signaling protein with a ligand binding sensor domain, GGDEF and EAL domainschromosome CDS939453 2220 + 0.450901
NA IL2172 Methyl-accepting chemotaxis proteinchromosome CDS2315730 1554 - 0.499357
NA IL2582 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domainschromosome CDS2774934 1341 - 0.495899
NA IL1851 Chemotaxis protein CheYchromosome CDS1982725 378 - 0.44709
NA IL2330 Hypothetical proteinchromosome CDS2497536 1350 - 0.428889
NA IL2222 Predicted PhoH-related ATPasechromosome CDS2374176 1386 - 0.489177
NA IL2006 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS2146201 633 - 0.486572
NA IL0202 Methyl-accepting chemotaxis protein (HAMP, Cache domains)chromosome CDS220762 1893 + 0.486529
NA IL1741 Signaling protein with TPR repeats and GGDEF domainchromosome CDS1874006 1818 + 0.449395
NA IL0923 Response regulator containing a CheY-like receiver domain and an HD-GYP domainchromosome CDS976133 1473 - 0.474542
NA IL1776 Methyl-accepting chemotaxis protein (CHASE3,HAMP,MCP domains)chromosome CDS1910678 1839 - 0.457314
NA IL0935 Signaling protein with a sensor domain, HAMP, GGDEF and EAL domainschromosome CDS987228 2292 - 0.470332
NA IL2198 Signal transduction histidine kinasechromosome CDS2347638 1419 - 0.486258
NA IL1260 Signal transduction ATPase, FimS familychromosome CDS1350136 1095 + 0.410046
NA IL1441 Signaling protein with a ligand-binding sensor domain and GGDEF domainchromosome CDS1552748 2913 + 0.443186
NA IL0645 Predicted membrane proteinchromosome CDS702600 900 + 0.385556
NA IL2343 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2513636 1641 + 0.45582
NA IL1203 Signal transduction histidine kinase (contains PAS domain)chromosome CDS1291366 1008 - 0.470238
NA IL0296 Response regulator of the LytR/AlgR familychromosome CDS308386 723 + 0.484094
NA IL2076 Catabolite gene activator proteinchromosome CDS2211654 639 + 0.471049
NA IL2414 Intracellular signaling protein (PAS,GGDEF domains)chromosome CDS2586892 900 + 0.497778
NA IL2583 Signal transduction histidine kinase, contains HAMP domainchromosome CDS2776271 1425 - 0.505965
NA IL1720 Chemotaxis protein CheYchromosome CDS1852544 357 + 0.464986
NA IL0167 Signal transduction histidine kinasechromosome CDS177052 1050 - 0.487619
NA IL2065 Signaling protein with a GGDEF domainchromosome CDS2202605 873 - 0.449026
NA IL2545 Signaling proteinchromosome CDS2728019 2793 - 0.486216
NA IL1068 Methyl-accepting chemotaxis protein with ligand-binding sensor domain and HAMP domainchromosome CDS1147657 1632 - 0.485294
NA IL2062 Signaling protein with a HAMP, PAS and Histidine kinase domainchromosome CDS2199416 1113 + 0.475292
NA IL1648 Response regulator (CheY, wHTH domains)chromosome CDS1763285 666 - 0.438438
NA IL1419 Signal-transduction proteinchromosome CDS1527145 1854 + 0.451996
NA IL0857 Signaling protein with a sensor domain and GGDEF domainchromosome CDS913702 1524 + 0.437664
NA IL1539 Signaling proteinchromosome CDS1657015 1590 - 0.425157
NA IL2122 Predicted signal transduction proteinchromosome CDS2259050 849 - 0.471143
NA IL0492 Signal transduction histidine kinase (contains HAMP domain)chromosome CDS516835 1620 - 0.466049
NA IL0490 HPt domainchromosome CDS515669 351 + 0.467236
NA IL1447 Hybrid sensor histidine kinasechromosome CDS1561837 1935 - 0.455297
NA IL1177 Signaling protein with a cAMP-binding, CBS domains and predicted nucleotidyltransferase domainchromosome CDS1258812 1833 - 0.462084
NA IL1886 Predicted signal transduction proteinchromosome CDS2017338 858 - 0.447552
NA IL1715 Chemotaxis protein CheY (2 CheY domains)chromosome CDS1845942 795 + 0.451572
NA IL2169 Membrane-anchored signaling protein (PAS,GGDEF,EAL doamins)chromosome CDS2311436 2265 + 0.472406
NA IL1206 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS1294489 624 - 0.448718
NA IL0298 Signaling protein with membrane-bound sensor domain and GGDEF domainchromosome CDS310576 1203 + 0.497091
NA IL0318 Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domainschromosome CDS326293 2553 + 0.446534
NA IL0755 Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domainschromosome CDS813178 2490 + 0.454217
NA IL1710 Signal transduction histidine kinasechromosome CDS1842073 684 + 0.428363
NA IL2183 Secreted protein, containing von Willebrand factor (vWF) type A domainchromosome CDS2332576 1059 - 0.494806
NA IL2387 Intracellular signaling protein (2 PAS, GGDEF domains)chromosome CDS2558356 1179 - 0.463104
NA IL1784 disrupted signaling protein (xGGDEF and EAL domains)chromosome CDS1918119 1332 - 0.41967
NA IL2601 Hypothetical proteinchromosome CDS2797081 345 + 0.391304
NA IL2320 Predicted HD-hydrolase family enzymechromosome CDS2485189 1173 - 0.468031
NA IL2535 Intracellular signaling protein (GAF,GGDEF domains)chromosome CDS2717753 1110 + 0.463964
NA IL1208 Response regulator containing a CheY-like receiver domain and an HD-GYP domainchromosome CDS1296982 1563 + 0.472809
NA IL2204 Serine/threonine protein kinasechromosome CDS2354926 1338 + 0.488042
NA IL0295 Regulator of cell autolysis (HATPase)chromosome CDS307418 1005 + 0.478607
NA IL1271 Signaling protein with a GAF domainchromosome CDS1360874 474 + 0.478903
NA IL0495 Probable signal transduction protein, containing Hpt domainchromosome CDS521357 357 - 0.431373
NA IL0604 Signal transduction histidine kinase (contains GAF domain)chromosome CDS651375 1368 - 0.451754
NA IL1686 Signaling protein with a GGDEF domainchromosome CDS1809471 906 + 0.440397
NA IL1296 Methyl-accepting chemotaxis proteinchromosome CDS1393875 1641 + 0.452773
NA IL2487 Intracellular signaling protein (PAS,GAF,GGDEF domains)chromosome CDS2663460 1362 - 0.414097
NA IL0992 Signaling protein with a ligand-binding sensor domain, PAS, GGDEF and EAL domainschromosome CDS1051740 3693 + 0.439209
NA IL0791 Uncharacterized conserved proteinchromosome CDS848825 489 + 0.464213
NA IL1261 Response regulator of the LytR/AlgR familychromosome CDS1351227 819 + 0.438339
NA IL0100 Signaling protein with membrane-bound sensor domain and GGDEF domainchromosome CDS102731 906 - 0.46468
NA IL0829 Response regulator with TPR repeatchromosome CDS885104 1644 + 0.449513
NA IL2061 Response regulator, contains CheY-like receiver, AAA-type ATPase and DNA-binding domainschromosome CDS2197906 1326 + 0.516591
NA IL1544 Signaling protein with a PAS and GGDEF domainschromosome CDS1662983 903 - 0.449612
NA IL0206 Intracellular signaling protein (GAF,GGDEF,EAL domains)chromosome CDS224914 2601 + 0.471357
NA IL2366 Signaling protein with a acyltransferase and GGDEF domainschromosome CDS2537085 1779 - 0.464868
NA IL2209 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2360593 1776 - 0.487613
NA IL0511 PAS domain containing signalling proteinchromosome CDS536542 420 + 0.483333
NA IL2385 Photoactive yellow proteinchromosome CDS2556712 378 + 0.415344
NA IL2494 Intracellular signaling protein (PAS,GAF,GGDEF domains)chromosome CDS2672948 1389 - 0.468682
NA IL1786 Uncharacterized membrane protein, contains PAS domainchromosome CDS1920806 624 - 0.392628
NA IL2340 Signaling protein with membrane-bound sensor domain and GGDEF domainchromosome CDS2511108 1197 - 0.487051
NA IL2064 Methyl-accepting chemotaxis protein (2 PAS,MCP domains)chromosome CDS2201265 1311 + 0.512586
NA IL0942 Phosphate starvation-inducible protein PhoHchromosome CDS996808 990 + 0.477778
NA IL2322 Intracellular signaling protein (2 PAS, GGDEF,EAL domains)chromosome CDS2487016 2046 - 0.462854
NA IL1673 Methyl-accepting chemotaxis protein (2 PAS,MCP domains)chromosome CDS1792330 1296 - 0.438272
NA IL2540 Hypothetical proteinchromosome CDS2723077 420 - 0.469048
NA IL2376 Intracellular signaling protein (EAL,mHD,GYP domains)chromosome CDS2546891 1209 + 0.462366
NA IL0313 Signaling protein with membrane-bound sensor domain and an ATPase domainchromosome CDS322225 1083 + 0.478301
NA IL0426 Signaling protein with a sensor domain, CHASE, GGDEF and EAL domainschromosome CDS439033 2139 - 0.465638
NA IL0155 Response regulator, LuxR family (CheY-HTH)chromosome CDS164558 645 + 0.431008
NA IL1305 UspA-related nucleotide-binding proteinchromosome CDS1402679 927 + 0.466019
aceK IL0607 Isocitrate dehydrogenase kinase/phosphatasechromosome CDS657167 1695 + 0.496165
aer IL0032 Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)chromosome CDS35137 1572 - 0.481552
apaH IL2234 Diadenosine tetraphosphatasechromosome CDS2388340 819 + 0.45177
arcA IL0491 Response regulator (CheY,wHTH domains)chromosome CDS516075 660 - 0.478788
arcC/arsR fusion IL2124 ArsC/ArsR fusion proteinchromosome CDS2262091 741 + 0.483131
barA IL1732 Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains)chromosome CDS1863048 2601 + 0.453287
bolA IL1052 Predicted transcriptional regulator, BolA superfamilychromosome CDS1130710 321 - 0.442368
cheA IL1114 Chemotaxis-specific histidine kinasechromosome CDS1194698 2151 - 0.482566
cheB IL1113 Chemotaxis response regulatorchromosome CDS1193522 1161 - 0.507321
cheR IL1148 Methylase of chemotaxis methyl-accepting proteinschromosome CDS1227986 837 - 0.459976
cheW_1 IL1110 Chemotaxis protein CheWchromosome CDS1191347 504 - 0.470238
cheW_2 IL1111 CheW-like domain containing proteinchromosome CDS1191872 858 - 0.455711
cheY IL1116 Chemotaxis protein CheYchromosome CDS1197625 372 - 0.435484
cheZ IL1115 Chemotaxis protein CheZchromosome CDS1196862 750 - 0.466667
chrR IL1392 Transcription negative regulator ChrRchromosome CDS1495229 678 + 0.467552
cpxA IL2433 Signal transduction histidine kinase (contains HAMP domain)chromosome CDS2605993 1362 - 0.508811
cpxR IL2434 Response regulator (CheY,wHTH domains)chromosome CDS2607351 681 - 0.475771
csrA IL1737 Carbon storage regulatory proteinchromosome CDS1869656 189 - 0.42328
cstA IL0697 Carbon starvation regulatory proteinchromosome CDS751937 1680 + 0.471429
dksA IL2250 DnaKchromosome CDS2409267 453 + 0.485651
envZ IL0321 Signal transduction histidine kinase (contains HAMP domain)chromosome CDS330089 1311 + 0.500381
fecR IL1593 Iron-dicitrate sensor, membrane componentchromosome CDS1707959 960 - 0.494792
flgN IL1152 Flagellar synthesis protein FlgNchromosome CDS1231238 402 + 0.452736
fliH_2 IL1202 Flagellar biosynthesis proteinchromosome CDS1290012 1362 - 0.491924
fliK IL1195 Flagellar hook-length control proteinchromosome CDS1282299 1767 - 0.487832
fnr IL0179 Anaerobic regulatory proteinchromosome CDS193112 696 - 0.441092
glnE IL1959 Glutamine synthetase adenylyltransferasechromosome CDS2087038 2847 - 0.48156
glnG IL2435 Nitrogen regulation protein NRI (CHEY,AAA domains)chromosome CDS2608107 1407 - 0.508173
glnL IL2436 Nitrogen-specific sensor histidine kinasechromosome CDS2609503 1122 - 0.487522
hnr IL1096 Response regulator of sigma subunit, serine phosphatase (CheY-RsbU)chromosome CDS1180164 990 - 0.459596
hyfR IL1204 Probable response regulator of flagellar motilitychromosome CDS1292493 1437 - 0.48991
kdpD IL1659 K+ sensor histidine kinasechromosome CDS1775927 1032 + 0.487403
kdpE IL1660 Response regulator (CheY, wHTH domains)chromosome CDS1776955 714 + 0.508403
kdtA IL1987 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS2119021 1986 - 0.474824
lexA IL0262 SOS-response transcriptional repressorchromosome CDS275539 618 - 0.485437
narL IL0182 Nitrate/nitrite response regulator (CheY, HTH domain)chromosome CDS195517 660 - 0.489394
narX IL0184 Nitrate/nitrite sensor histidine kinasechromosome CDS197751 1797 - 0.477462
norR IL0196 Nitric oxide reductase regulatorchromosome CDS212472 1545 - 0.516505
ompR IL0320 Response regulator (CheY, wHTH domains)chromosome CDS329364 726 + 0.523416
phoB IL2111 Positive response regulator for pho regulon (CheY-wHTH)chromosome CDS2248260 687 - 0.480349
phoR IL2110 Phosphate regulon sensor histidine kinase (contains PAS domain)chromosome CDS2246947 1296 - 0.493056
proQ IL1273 Activator of osmoprotectant transporterchromosome CDS1361632 627 + 0.417863
pspA IL0731 Phage shock protein Achromosome CDS788222 675 - 0.451852
pspC IL0729 Putative stress-responsive transcriptional regulatorchromosome CDS787584 384 - 0.440104
pspF IL0732 Transcriptional regulator, AtoC family (AAA,HTH domains)chromosome CDS789087 1077 + 0.457753
ptsN IL0394 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)chromosome CDS414097 471 - 0.47983
ptsP IL0504 Intracellular signaling protein (GAF,PtsI domains)chromosome CDS528367 2274 + 0.51847
qseB_1 IL0095 Response regulator (CheY,wHTH domains)chromosome CDS99109 663 + 0.509804
qseC_1 IL0096 Signal transduction histidine kinase (contains HAMP domain)chromosome CDS99882 1224 + 0.450163
qseC_2 IL1647 Signal transduction histidine kinasechromosome CDS1761879 1410 - 0.414184
relA IL0804 (p)ppGpp synthetase IIchromosome CDS860857 2190 - 0.519178
rsbU IL1713 Response regulator of sigma subunit, serine phosphatase (CheY-RsbU)chromosome CDS1843865 1671 - 0.464393
rsbV IL1714 Anti-anti-sigma regulatory factorchromosome CDS1845535 306 - 0.431373
rseA IL0815 Negative regulator of sigma E activitychromosome CDS872137 588 - 0.488095
rseB IL0814 Negative regulator of sigma E activitychromosome CDS871167 966 - 0.449275
rseC IL0813 Positive regulator of sigma E activitychromosome CDS870724 444 - 0.468468
spoT IL2380 (p)ppGpp synthetase Ichromosome CDS2551492 2106 - 0.491928
tap IL2235 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS2389192 2001 + 0.458771
trg IL0610 Methyl-accepting chemotaxis protein (contains HAMP domain)chromosome CDS662042 1626 - 0.46556
typA IL2438 GTP-binding regulator BipA/TypAchromosome CDS2612369 1842 + 0.463627
uspA IL2130 UspA-related nucleotide-binding proteinchromosome CDS2268785 849 + 0.489988
uvrY IL0654 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS711878 651 - 0.466974