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2024-05-02 17:38:03

Gene list

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COG category: Function unknown
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236

Number of genes found: 198

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodoferax ferrireducens DSM 15236, DSM 15236
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rfer_1593 protein of unknown function DUF490chromosome CDS1724703 3879 + 0.689095
NA Rfer_0154 DinBchromosome CDS153968 507 - 0.552268
NA Rfer_0326 CreAchromosome CDS325664 471 + 0.605096
NA Rfer_0445 type III effector Hrp-dependent outerschromosome CDS450751 1272 - 0.669811
NA Rfer_0726 protein of unknown function UPF0075chromosome CDS765198 1170 - 0.629915
NA Rfer_2441 Carboxymuconolactone decarboxylasechromosome CDS2687634 831 + 0.578821
NA Rfer_0449 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS455152 495 - 0.581818
NA Rfer_0366 conserved hypothetical proteinchromosome CDS367514 4146 - 0.637964
NA Rfer_0915 DoxXchromosome CDS959857 396 + 0.54798
NA Rfer_1841 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS1979634 498 + 0.568273
NA Rfer_2372 protein of unknown function DUF328chromosome CDS2611676 780 - 0.580769
NA Rfer_2215 SpoVRchromosome CDS2426491 1536 - 0.57487
NA Rfer_3896 protein of unknown function DUF583chromosome CDS4350281 555 + 0.589189
NA Rfer_2814 protein of unknown function DUF849chromosome CDS3114701 873 - 0.628866
NA Rfer_3490 conserved hypothetical 37.1 kDa protein in ModC-BioA intergenic regionchromosome CDS3882549 189 + 0.661376
NA Rfer_1782 conserved hypothetical proteinchromosome CDS1917195 1521 - 0.651545
NA Rfer_4130 protein of unknown function DUF488chromosome CDS4605920 390 + 0.625641
NA Rfer_0749 protein of unknown function DUF167chromosome CDS785867 345 - 0.582609
NA Rfer_3907 CRISPR-associated protein Cas1chromosome CDS4363903 1029 + 0.61516
NA Rfer_1296 protein of unknown function DUF502chromosome CDS1390328 681 + 0.577093
NA Rfer_1400 putative membrane proteinchromosome CDS1511896 447 - 0.583893
NA Rfer_0817 YhhN-likechromosome CDS852002 711 + 0.628692
NA Rfer_3145 Carboxymuconolactone decarboxylasechromosome CDS3483195 501 - 0.626747
NA Rfer_4116 conserved hypothetical proteinchromosome CDS4593090 390 + 0.605128
NA Rfer_1626 conserved hypothetical protein 255chromosome CDS1757338 918 - 0.608932
NA Rfer_3484 conserved hypothetical proteinchromosome CDS3875639 846 + 0.609929
NA Rfer_3863 protein of unknown function DUF494chromosome CDS4312826 513 + 0.623782
NA Rfer_1707 Cupin 2 proteinchromosome CDS1837258 330 - 0.566667
NA Rfer_3255 protein of unknown function DUF214chromosome CDS3607726 2520 - 0.654762
NA Rfer_3861 Peptidoglycan-binding LysMchromosome CDS4310236 1230 + 0.651219
NA Rfer_1481 TRAP dicarboxylate transporter-DctM subunitchromosome CDS1593203 1284 - 0.595794
NA Rfer_2861 ThiJ/PfpIchromosome CDS3160047 681 - 0.613803
NA Rfer_0812 protein of unknown function DUF185chromosome CDS847825 1128 - 0.62234
NA Rfer_2564 protein of unknown function DUF152chromosome CDS2825620 762 - 0.649606
NA Rfer_2474 protein of unknown function DUF404chromosome CDS2719821 1548 - 0.602067
NA Rfer_2497 protein of unknown function DUF404chromosome CDS2757894 2616 + 0.652905
NA Rfer_1330 protein of unknown function DUF833chromosome CDS1429155 801 - 0.646692
NA Rfer_2907 protein of unknown function DUF329chromosome CDS3216619 219 + 0.575342
NA Rfer_1544 protein of unknown function DUF344chromosome CDS1660201 1566 + 0.627714
NA Rfer_1607 protein of unknown function DUF692chromosome CDS1738787 963 - 0.61163
NA Rfer_2929 protein of unknown function DUF1415chromosome CDS3240637 621 + 0.599034
NA Rfer_2692 protein of unknown function DUF520chromosome CDS2963077 486 + 0.545267
NA Rfer_3212 protein of unknown function DUF112, transmembranechromosome CDS3559122 1515 - 0.618482
NA Rfer_2535 DoxXchromosome CDS2794994 411 + 0.603406
NA Rfer_3964 conserved hypothetical proteinchromosome CDS4432050 417 - 0.685851
NA Rfer_2886 GatB/Yqeychromosome CDS3189178 447 + 0.624161
NA Rfer_2079 Iojap-related proteinchromosome CDS2254494 786 + 0.575064
NA Rfer_2037 conserved hypothetical proteinchromosome CDS2200854 933 + 0.64523
NA Rfer_4131 Alkylhydroperoxidasechromosome CDS4606350 348 + 0.655172
NA Rfer_2413 protein of unknown function DUF1624chromosome CDS2655999 777 - 0.593308
NA Rfer_2298 conserved hypothetical proteinchromosome CDS2521714 189 - 0.555556
NA Rfer_2473 protein of unknown function DUF403chromosome CDS2718844 960 - 0.583333
NA Rfer_1605 DoxXchromosome CDS1737494 528 - 0.607955
NA Rfer_1619 protein of unknown function DUF323chromosome CDS1751226 1197 - 0.648287
NA Rfer_2695 protein of unknown function DUF205chromosome CDS2965307 675 - 0.601481
NA Rfer_3904 CRISPR-associated protein TM1801chromosome CDS4361457 885 + 0.498305
NA Rfer_1885 Invasion gene expression up-regulator, SirBchromosome CDS2021630 384 + 0.598958
NA Rfer_1634 TRAP transporter, 4TM/12TM fusion proteinchromosome CDS1764009 2103 - 0.630052
NA Rfer_1785 protein of unknown function YGGTchromosome CDS1921045 567 + 0.633157
NA Rfer_3389 Alkylhydroperoxidasechromosome CDS3766015 570 - 0.615789
NA Rfer_3003 Uncharacterised peroxidase-relatedchromosome CDS3311254 576 + 0.604167
NA Rfer_1443 protein of unknown function DUF455chromosome CDS1555703 780 + 0.533333
NA Rfer_2696 YbaK/prolyl-tRNA synthetase associated proteinchromosome CDS2966032 486 - 0.619342
NA Rfer_3853 protein of unknown function DUF101chromosome CDS4302793 417 - 0.673861
NA Rfer_0617 protein of unknown function DUF461chromosome CDS639995 516 + 0.643411
NA Rfer_2179 iron-sulfur cluster assembly protein IscAchromosome CDS2377930 324 + 0.555556
NA Rfer_0800 type II secretion system proteinchromosome CDS837027 969 + 0.641899
NA Rfer_2825 protein of unknown function DUF1458chromosome CDS3126528 207 + 0.565217
NA Rfer_2395 protein of unknown function UPF0061chromosome CDS2638881 1491 + 0.595573
NA Rfer_2024 adenylate cyclasechromosome CDS2183066 1500 - 0.601333
NA Rfer_2308 conserved hypothetical proteinchromosome CDS2531667 939 - 0.563365
NA Rfer_2494 protein of unknown function DUF534chromosome CDS2754756 1023 + 0.617791
NA Rfer_4046 protein of unknown function DUF344chromosome CDS4510822 888 - 0.55518
NA Rfer_2871 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS3171197 609 + 0.535304
NA Rfer_0614 multiple antibiotic resistance (MarC)-related proteinschromosome CDS638361 603 - 0.625207
NA Rfer_2526 conserved hypothetical proteinchromosome CDS2785084 852 - 0.620892
NA Rfer_2516 conserved hypothetical proteinchromosome CDS2777770 951 - 0.463722
NA Rfer_1184 putative uncharacterized conserved proteinchromosome CDS1269396 948 + 0.567511
NA Rfer_2450 protein of unknown function DUF466chromosome CDS2696940 201 - 0.562189
NA Rfer_2305 conserved hypothetical transmembrane proteinchromosome CDS2528334 723 - 0.515906
NA Rfer_2290 protein of unknown function UPF0125chromosome CDS2514443 348 - 0.614943
NA Rfer_1542 conserved hypothetical proteinchromosome CDS1658731 819 + 0.612943
NA Rfer_1910 protein of unknown function DUF498chromosome CDS2051057 375 - 0.597333
NA Rfer_3138 conserved hypothetical proteinchromosome CDS3477998 342 + 0.584795
NA Rfer_4175 TRAP dicarboxylate transporter-DctM subunitchromosome CDS4644416 1284 + 0.597352
NA Rfer_0207 protein of unknown function DUF558chromosome CDS205907 783 - 0.652618
NA Rfer_1717 protein of unknown function DUF513, hemXchromosome CDS1853193 1110 + 0.63964
NA Rfer_1478 cobalamin adenosyltransferasechromosome CDS1589544 579 + 0.649396
NA Rfer_0724 protein of unknown function DUF583chromosome CDS764354 402 + 0.557214
NA Rfer_2190 protein of unknown function DUF299chromosome CDS2389443 822 - 0.526764
NA Rfer_2166 protein of unknown function DUF195chromosome CDS2360903 1401 + 0.622413
NA Rfer_2339 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit Bchromosome CDS2571696 858 - 0.568765
NA Rfer_3757 conserved hypothetical proteinchromosome CDS4190537 291 - 0.553265
NA Rfer_4206 Saccharopine dehydrogenasechromosome CDS4677856 1116 - 0.584229
NA Rfer_1458 conserved hypothetical protein 103chromosome CDS1568953 333 + 0.588589
NA Rfer_0610 Uncharacterized iron-regulated protein-likechromosome CDS634960 945 - 0.651852
NA Rfer_1482 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS1594483 675 - 0.576296
NA Rfer_2763 protein of unknown function DUF192chromosome CDS3051920 453 + 0.532009
NA Rfer_3274 CsbD-likechromosome CDS3633996 210 + 0.471429
NA Rfer_1797 protein of unknown function DUF339chromosome CDS1935709 324 - 0.484568
NA Rfer_3908 protein of unknown function DUF196chromosome CDS4364941 291 + 0.56701
NA Rfer_2888 protein of unknown function DUF615chromosome CDS3191066 615 + 0.617886
NA Rfer_1750 conserved hypothetical proteinchromosome CDS1885783 321 + 0.538941
NA Rfer_1686 putative membrane proteinchromosome CDS1815356 672 + 0.620536
NA Rfer_2132 protein of unknown function DUF150chromosome CDS2311607 615 + 0.58374
NA Rfer_4021 conserved hypothetical proteinchromosome CDS4484857 1098 + 0.686703
NA Rfer_1624 conserved hypothetical proteinchromosome CDS1756346 660 + 0.574242
NA Rfer_2723 membrane protein of unknown functionchromosome CDS3006202 402 + 0.537313
NA Rfer_3566 conserved hypothetical proteinchromosome CDS3964708 1230 - 0.619512
NA Rfer_3852 protein of unknown function UPF0027chromosome CDS4301359 1431 - 0.671558
NA Rfer_4194 TRAP dicarboxylate transporter-DctM subunitchromosome CDS4663429 1269 - 0.5658
NA Rfer_1929 cytochrome oxidase maturation protein, cbb3-typechromosome CDS2073603 165 + 0.430303
NA Rfer_0391 conserved hypothetical proteinchromosome CDS399063 1038 + 0.621387
NA Rfer_1709 protein of unknown function DUF342chromosome CDS1839921 1605 - 0.635514
NA Rfer_3956 DTWchromosome CDS4424286 738 + 0.653117
NA Rfer_4037 filamentation induced by cAMP protein Ficchromosome CDS4502384 1083 + 0.576177
NA Rfer_3823 YbaK/prolyl-tRNA synthetase associated proteinchromosome CDS4266681 747 - 0.638554
NA Rfer_4026 Glyoxalase/bleomycin resistance protein/dioxygenasechromosome CDS4488530 486 + 0.596708
NA Rfer_4042 membrane protein of unknown functionchromosome CDS4508513 420 - 0.607143
NA Rfer_1295 conserved hypothetical proteinchromosome CDS1389984 342 + 0.628655
NA Rfer_4243 protein of unknown function DUF37chromosome CDS4711150 285 - 0.554386
NA Rfer_2360 conserved hypothetical proteinchromosome CDS2599339 303 - 0.514852
NA Rfer_2080 protein of unknown function DUF163chromosome CDS2255289 468 + 0.619658
NA Rfer_0801 type II secretion system proteinchromosome CDS838009 939 + 0.633653
NA Rfer_0102 LemAchromosome CDS105632 633 + 0.578199
NA Rfer_3885 protein of unknown function DUF849chromosome CDS4336378 822 - 0.659367
NA Rfer_0494 protein of unknown function DUF1508chromosome CDS513638 333 + 0.573574
NA Rfer_3253 Smr protein/MutS2chromosome CDS3606593 654 + 0.620795
NA Rfer_2627 protein of unknown function DUF710chromosome CDS2890563 354 + 0.641243
NA Rfer_3804 conserved hypothetical protein 701chromosome CDS4244489 429 - 0.582751
NA Rfer_1290 protein of unknown function DUF971chromosome CDS1385567 414 + 0.640097
NA Rfer_2760 ATP-dependent Clp protease adaptor protein ClpSchromosome CDS3049436 363 - 0.520661
NA Rfer_2772 protein of unknown function DUF808chromosome CDS3060456 936 + 0.601496
NA Rfer_1039 TRAP transporter, 4TM/12TM fusion proteinchromosome CDS1098132 2598 - 0.611239
NA Rfer_2730 protein of unknown function DUF541chromosome CDS3014012 738 - 0.602981
NA Rfer_1859 HesB/YadR/YfhFchromosome CDS1999727 354 + 0.644068
NA Rfer_3936 protein of unknown function DUF493chromosome CDS4399803 270 - 0.592593
NA Rfer_1419 SlyXchromosome CDS1526600 219 + 0.625571
NA Rfer_0618 protein of unknown function DUF461chromosome CDS641074 540 + 0.633333
NA Rfer_0448 TRAP dicarboxylate transporter-DctM subunitchromosome CDS453878 1278 - 0.610329
NA Rfer_2543 conserved hypothetical proteinchromosome CDS2803683 447 - 0.550336
NA Rfer_3482 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS3873628 660 + 0.581818
NA Rfer_1344 UDP-2,3-diacylglucosamine hydrolasechromosome CDS1447519 831 - 0.625752
NA Rfer_2304 Pyrrolo-quinoline quinonechromosome CDS2527198 1140 - 0.607895
NA Rfer_2565 protein of unknown function DUF181chromosome CDS2826450 1731 - 0.59792
NA Rfer_2569 TRAP C4-dicarboxylate transport system permease DctM subunitchromosome CDS2829817 1344 + 0.611607
NA Rfer_2915 Ferric reductase-like transmembrane component-likechromosome CDS3224903 642 + 0.587227
NA Rfer_3318 RDDchromosome CDS3684208 483 - 0.567288
NA Rfer_3434 protein of unknown function UPF0040chromosome CDS3822876 492 - 0.560976
NA Rfer_0776 OstA-like proteinchromosome CDS813018 642 + 0.621495
NA Rfer_1939 conserved hypothetical proteinchromosome CDS2081476 678 + 0.634218
NA Rfer_4110 3-demethylubiquinone-9 3-methyltransferasechromosome CDS4587166 414 + 0.618357
NA Rfer_2113 cobalamin (vitamin B12) biosynthesis CbiX proteinchromosome CDS2290058 372 - 0.63172
NA Rfer_3305 DedA protein (DSG-1 protein)chromosome CDS3668789 648 - 0.570988
NA Rfer_3628 Alkylhydroperoxidasechromosome CDS4045802 366 + 0.592896
NA Rfer_3781 protein of unknown function DUF485chromosome CDS4225961 309 + 0.521036
NA Rfer_4174 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS4643745 675 + 0.574815
NA Rfer_2644 Cupin 4chromosome CDS2909606 1155 - 0.622511
NA Rfer_2028 conserved hypothetical proteinchromosome CDS2187434 849 + 0.636042
NA Rfer_3468 protein of unknown function DUF302chromosome CDS3859640 390 + 0.610256
NA Rfer_2579 protein of unknown function DUF454chromosome CDS2839035 408 - 0.610294
NA Rfer_1648 protein of unknown function DUF480chromosome CDS1778218 687 - 0.636099
NA Rfer_4195 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS4664699 531 - 0.53484
NA Rfer_3763 conserved hypothetical proteinchromosome CDS4198980 693 + 0.61039
NA Rfer_3813 multiple antibiotic resistance (MarC)-related proteinschromosome CDS4252242 621 + 0.600644
NA Rfer_4035 glycoside hydrolase 15-relatedchromosome CDS4498606 1836 + 0.670479
NA Rfer_1347 ErfK/YbiS/YcfS/YnhGchromosome CDS1449457 1245 - 0.590361
NA Rfer_2872 TRAP dicarboxylate transporter-DctM subunitchromosome CDS3171820 1788 + 0.579978
NA Rfer_1963 protein of unknown function DUF125, transmembranechromosome CDS2107038 702 - 0.680912
NA Rfer_1061 protein of unknown function DUF262chromosome CDS1129538 1728 + 0.527778
NA Rfer_2075 protein of unknown function DUF28chromosome CDS2250920 735 + 0.610884
NA Rfer_2146 conserved hypothetical proteinchromosome CDS2329872 744 - 0.635753
NA Rfer_2094 Tetratricopeptide TPR_2chromosome CDS2268317 780 + 0.565385
NA Rfer_3156 protein of unknown function DUF343chromosome CDS3493235 183 + 0.601093
NA Rfer_1557 protein of unknown function DUF218chromosome CDS1681974 750 - 0.62
NA Rfer_0397 AMMECR1chromosome CDS404048 642 - 0.630841
NA Rfer_1842 TRAP dicarboxylate transporter-DctM subunitchromosome CDS1980128 1350 + 0.57037
NA Rfer_2285 peptidase U61, LD-carboxypeptidase Achromosome CDS2508443 1056 - 0.587121
NA Rfer_2216 protein of unknown function DUF444chromosome CDS2428035 1269 - 0.593381
NA Rfer_2530 protein of unknown function DUF58chromosome CDS2789129 1026 + 0.670565
NA Rfer_0725 HesB/YadR/YfhFchromosome CDS764813 363 + 0.534435
NA Rfer_3456 protein of unknown function DUF980chromosome CDS3847537 819 + 0.64591
NA Rfer_2688 protein of unknown function DUF1255chromosome CDS2959082 318 + 0.569182
NA Rfer_1758 conserved hypothetical proteinchromosome CDS1891232 213 + 0.600939
NA Rfer_3443 conserved hypothetical proteinchromosome CDS3832969 687 - 0.614265
NA Rfer_3483 TRAP dicarboxylate transporter-DctM subunitchromosome CDS3874290 1284 + 0.580997
NA Rfer_1829 undecaprenol kinase, putativechromosome CDS1967111 834 + 0.568345
NA Rfer_0912 YceIchromosome CDS956098 567 - 0.493827
NA Rfer_1579 conserved hypothetical proteinchromosome CDS1710266 471 - 0.636943
NA Rfer_0520 protein of unknown function UPF0016chromosome CDS544383 564 + 0.618794
NA Rfer_0114 protein of unknown function DUF482chromosome CDS115452 1266 + 0.623223
NA Rfer_1199 hypothetical proteinchromosome CDS1285073 468 - 0.621795
NA Rfer_2536 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit Bchromosome CDS2795436 792 + 0.616162
NA Rfer_1947 conserved hypothetical proteinchromosome CDS2090709 318 + 0.575472
NA Rfer_3030 chromosome segregation and condensation protein ScpAchromosome CDS3344867 849 + 0.578327
NA Rfer_2961 protein of unknown function DUF34chromosome CDS3268384 759 + 0.621871
NA Rfer_3054 putative uncharacterized conserved proteinchromosome CDS3378196 948 - 0.565401
NA Rfer_0200 protein of unknown function DUF162chromosome CDS198476 675 - 0.619259