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2024-05-05 22:57:32

Gene list

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COG category: Function unknown
Organism: Frankia sp. CcI3, CcI3

Number of genes found: 222

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Frankia sp. CcI3, CcI3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Francci3_4228 Hemerythrin HHE cation binding regionchromosome CDS5043485 591 - 0.686971
NA Francci3_3864 LmbE-like proteinchromosome CDS4626941 945 - 0.703704
NA Francci3_1045 hypothetical proteinchromosome CDS1239924 480 - 0.670833
NA Francci3_3077 serine/threonine protein kinasechromosome CDS3645421 2127 + 0.714151
NA Francci3_2497 putative copper resistance protein Dchromosome CDS2947845 1185 - 0.701266
NA Francci3_2914 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3433833 474 + 0.668776
NA Francci3_0955 conserved hypothetical proteinchromosome CDS1128630 720 - 0.697222
NA Francci3_0269 conserved hypothetical protein 103chromosome CDS309008 477 - 0.744235
NA Francci3_0621 protein of unknown function UPF0031chromosome CDS704904 1605 + 0.754517
NA Francci3_3459 LmbE-like proteinchromosome CDS4124423 924 - 0.692641
NA Francci3_4198 protein of unknown function DUF181chromosome CDS5011160 1935 + 0.706977
NA Francci3_1575 protein of unknown function DUF218chromosome CDS1889690 699 + 0.703863
NA Francci3_2193 protein of unknown function DUF86chromosome CDS2565885 342 + 0.643275
NA Francci3_3921 protein of unknown function DUF501chromosome CDS4689354 633 - 0.739336
NA Francci3_2371 protein of unknown function DUF347chromosome CDS2747762 1275 + 0.676078
NA Francci3_4234 protein of unknown function DUF181chromosome CDS5051912 1401 - 0.718059
NA Francci3_2881 conserved hypothetical proteinchromosome CDS3397962 351 + 0.669516
NA Francci3_4308 PSP1chromosome CDS5146267 948 + 0.704641
NA Francci3_2904 protein of unknown function DUF124chromosome CDS3419150 1362 - 0.694567
NA Francci3_4069 LmbE-like proteinchromosome CDS4872458 783 - 0.687101
NA Francci3_0707 GtrA-like proteinchromosome CDS809609 573 - 0.630017
NA Francci3_3686 protein of unknown function DUF985chromosome CDS4422459 531 - 0.730697
NA Francci3_2994 protein of unknown function DUF309chromosome CDS3546999 477 + 0.767296
NA Francci3_3676 protein of unknown function DUF475chromosome CDS4408192 1173 - 0.673487
NA Francci3_1217 conserved hypothetical proteinchromosome CDS1454072 750 + 0.721333
NA Francci3_0769 hypothetical proteinchromosome CDS895621 1320 - 0.738636
NA Francci3_1973 ErfK/YbiS/YcfS/YnhGchromosome CDS2314287 834 + 0.697842
NA Francci3_1422 conserved hypothetical proteinchromosome CDS1713158 267 + 0.569288
NA Francci3_4357 membrane-flanked domainchromosome CDS5204587 486 + 0.720165
NA Francci3_2556 Addiction module toxin, Txe/YoeBchromosome CDS3018165 261 + 0.601533
NA Francci3_3860 conserved hypothetical proteinchromosome CDS4623268 987 + 0.756839
NA Francci3_0163 conserved hypothetical proteinchromosome CDS192225 1371 - 0.69876
NA Francci3_2669 integral membrane proteinchromosome CDS3150887 1179 + 0.699746
NA Francci3_0964 glycosyl transferase, family 2chromosome CDS1139233 1467 + 0.709611
NA Francci3_1394 conserved hypothetical proteinchromosome CDS1675607 828 - 0.751208
NA Francci3_4312 conserved hypothetical proteinchromosome CDS5151143 1122 + 0.717469
NA Francci3_0755 RDDchromosome CDS878720 1023 - 0.717498
NA Francci3_3056 protein of unknown function UPF0047chromosome CDS3621910 405 - 0.676543
NA Francci3_2128 protein of unknown function DUF820chromosome CDS2498395 555 + 0.652252
NA Francci3_2819 protein of unknown function DUF124chromosome CDS3319777 693 - 0.694084
NA Francci3_4233 protein of unknown function DUF181chromosome CDS5050565 1338 - 0.710762
NA Francci3_3872 protein of unknown function DUF195chromosome CDS4634762 1482 + 0.727395
NA Francci3_3816 protein of unknown function DUF1003chromosome CDS4574019 612 - 0.697712
NA Francci3_0386 protein of unknown function DUF433chromosome CDS459519 240 + 0.6875
NA Francci3_2384 hypothetical proteinchromosome CDS2760218 954 + 0.597484
NA Francci3_0245 conserved hypothetical proteinchromosome CDS284585 408 - 0.681373
NA Francci3_1008 MOSCchromosome CDS1201116 546 + 0.723443
NA Francci3_4362 Allergen V5/Tpx-1 relatedchromosome CDS5210115 795 - 0.742138
NA Francci3_1470 protein of unknown function DUF151chromosome CDS1761925 486 + 0.654321
NA Francci3_1464 protein of unknown function DUF881chromosome CDS1757483 903 + 0.726467
NA Francci3_1255 conserved hypothetical proteinchromosome CDS1499498 564 - 0.689716
NA Francci3_3037 conserved hypothetical proteinchromosome CDS3603626 1302 - 0.705069
NA Francci3_1617 protein of unknown function DUF899, thioredoxin-likechromosome CDS1939769 783 + 0.719029
NA Francci3_1093 conserved hypothetical proteinchromosome CDS1304689 687 + 0.671034
NA Francci3_0980 conserved hypothetical proteinchromosome CDS1158631 723 + 0.753804
NA Francci3_3495 ribonuclease BNchromosome CDS4166894 1029 + 0.688047
NA Francci3_0752 protein of unknown function DUF343chromosome CDS874324 198 + 0.686869
NA Francci3_0316 Saccharopine dehydrogenasechromosome CDS364762 1188 - 0.767677
NA Francci3_1419 protein of unknown function DUF152chromosome CDS1710822 684 + 0.69883
NA Francci3_3786 conserved hypothetical proteinchromosome CDS4536417 1368 + 0.725146
NA Francci3_0529 cobalamin (vitamin B12) biosynthesis CbiX proteinchromosome CDS614615 474 - 0.71097
NA Francci3_1716 hypothetical proteinchromosome CDS2051195 825 - 0.692121
NA Francci3_3804 CsbD-likechromosome CDS4561993 183 + 0.661202
NA Francci3_1730 response regulator receiver and SARP domain proteinchromosome CDS2063941 2967 - 0.762723
NA Francci3_3561 protein of unknown function DUF503chromosome CDS4258363 399 - 0.694236
NA Francci3_2257 conserved hypothetical proteinchromosome CDS2634954 1755 + 0.746439
NA Francci3_2040 alkylhydroperoxidasechromosome CDS2401560 507 + 0.641026
NA Francci3_3376 alkylhydroperoxidasechromosome CDS4005111 465 - 0.690323
NA Francci3_0742 LPPG:Fo 2-phospho-L-lactate transferasechromosome CDS858612 1038 - 0.736031
NA Francci3_1073 NHL repeat proteinchromosome CDS1278220 1089 - 0.755739
NA Francci3_2795 copper resistance Dchromosome CDS3289571 2211 + 0.720941
NA Francci3_1171 CopG-like DNA-bindingchromosome CDS1398854 279 - 0.706093
NA Francci3_3704 Cobalamin adenosyltransferasechromosome CDS4438513 573 + 0.724258
NA Francci3_1406 protein of unknown function UPF0040chromosome CDS1693732 432 + 0.652778
NA Francci3_1909 protein of unknown function DUF62chromosome CDS2241855 900 + 0.763333
NA Francci3_3261 hypothetical proteinchromosome CDS3865452 498 + 0.640562
NA Francci3_4257 hypothetical proteinchromosome CDS5078659 750 + 0.732
NA Francci3_0558 protein of unknown function DUF520chromosome CDS650041 489 - 0.605317
NA Francci3_4346 LmbE-like proteinchromosome CDS5187419 909 - 0.722772
NA Francci3_4084 conserved hypothetical proteinchromosome CDS4893355 369 + 0.655827
NA Francci3_3616 conserved hypothetical proteinchromosome CDS4316386 879 + 0.696246
NA Francci3_2208 YceIchromosome CDS2582910 639 - 0.671362
NA Francci3_2852 Cupin 2chromosome CDS3363469 471 - 0.675159
NA Francci3_4546 protein of unknown function DUF37chromosome CDS5431713 531 - 0.751412
NA Francci3_3781 protein of unknown function UPF0182chromosome CDS4530305 3057 - 0.672882
NA Francci3_2241 hypothetical proteinchromosome CDS2613763 684 + 0.694444
NA Francci3_3352 protein of unknown function DUF820chromosome CDS3975762 633 + 0.668246
NA Francci3_4045 protein of unknown function DUF156chromosome CDS4829698 282 + 0.670213
NA Francci3_1636 protein of unknown function DUF199chromosome CDS1967954 987 + 0.749747
NA Francci3_0409 Peptidoglycan-binding LysMchromosome CDS481648 4158 - 0.724868
NA Francci3_3091 LOR/SDH bifunctional enzyme conserved regionchromosome CDS3662443 1245 + 0.697992
NA Francci3_1022 transcriptional regulator, XRE familychromosome CDS1216285 1326 - 0.704374
NA Francci3_1542 hypothetical proteinchromosome CDS1852543 246 - 0.723577
NA Francci3_2180 protein of unknown function DUF262chromosome CDS2553665 1269 - 0.609929
NA Francci3_2650 membrane protein-likechromosome CDS3129337 1782 + 0.712121
NA Francci3_1421 protein of unknown function DUF552chromosome CDS1712532 564 + 0.654255
NA Francci3_1884 protein of unknown function DUF86chromosome CDS2216256 372 + 0.66129
NA Francci3_0875 Antibiotic biosynthesis monooxygenasechromosome CDS1017849 321 - 0.647975
NA Francci3_1147 protein of unknown function DUF1254chromosome CDS1362773 1440 - 0.70625
NA Francci3_0246 Rv0623-like transcription factorchromosome CDS285155 270 + 0.67037
NA Francci3_1594 hypothetical proteinchromosome CDS1913055 726 + 0.681818
NA Francci3_4512 protein of unknown function DUF323chromosome CDS5386198 1464 + 0.726093
NA Francci3_3121 HesB/YadR/YfhFchromosome CDS3692952 363 - 0.641873
NA Francci3_3684 protein of unknown function DUF77chromosome CDS4420426 324 - 0.688272
NA Francci3_0169 Kelch repeat proteinchromosome CDS199276 1452 - 0.730716
NA Francci3_0693 Enzymatic protein of unknown functionchromosome CDS793414 1149 + 0.64926
NA Francci3_1194 hypothetical proteinchromosome CDS1426854 342 - 0.675439
NA Francci3_4399 protein of unknown function DUF820chromosome CDS5258992 549 + 0.703097
NA Francci3_2311 protein of unknown function DUF323chromosome CDS2689119 675 + 0.718518
NA Francci3_3252 conserved hypothetical proteinchromosome CDS3850784 1605 - 0.730218
NA Francci3_3767 anti-sigma factorchromosome CDS4516617 285 - 0.684211
NA Francci3_3903 LmbE-like proteinchromosome CDS4670818 903 - 0.688815
NA Francci3_1447 putative transglycosylase associated proteinchromosome CDS1738977 300 + 0.673333
NA Francci3_2026 conserved hypothetical proteinchromosome CDS2381014 609 - 0.673235
NA Francci3_0556 conserved hypothetical proteinchromosome CDS647837 1077 + 0.748375
NA Francci3_4152 conserved hypothetical proteinchromosome CDS4951639 1092 - 0.717033
NA Francci3_2976 Allergen V5/Tpx-1 relatedchromosome CDS3519275 1005 + 0.752239
NA Francci3_2300 pentapeptide repeatchromosome CDS2682410 1038 + 0.757225
NA Francci3_2786 protein of unknown function UPF0060chromosome CDS3280328 477 + 0.696017
NA Francci3_1896 protein of unknown function DUF167chromosome CDS2230254 294 - 0.772109
NA Francci3_0076 ErfK/YbiS/YcfS/YnhGchromosome CDS94744 696 - 0.673851
NA Francci3_3805 Ku proteinchromosome CDS4562297 1191 - 0.702771
NA Francci3_3916 protein of unknown function DUF1112chromosome CDS4684235 759 - 0.687747
NA Francci3_3868 protein of unknown function DUF952chromosome CDS4631156 375 - 0.722667
NA Francci3_3479 RNA-binding S4chromosome CDS4147799 225 - 0.702222
NA Francci3_1182 conserved hypothetical proteinchromosome CDS1413144 216 + 0.74537
NA Francci3_3141 RDDchromosome CDS3714218 405 - 0.68642
NA Francci3_0663 ribonuclease BNchromosome CDS758876 1236 + 0.68123
NA Francci3_1055 glycosyl transferase, family 39chromosome CDS1255341 1359 + 0.719647
NA Francci3_2647 membrane protein-likechromosome CDS3123858 1851 + 0.726094
NA Francci3_0670 protein of unknown function UPF0150chromosome CDS765678 267 - 0.681648
NA Francci3_3422 Twin-arginine translocation pathway signalchromosome CDS4069394 1167 + 0.711225
NA Francci3_0153 protein of unknown function DUF86chromosome CDS180922 348 + 0.635057
NA Francci3_2691 conserved hypothetical proteinchromosome CDS3178084 1008 + 0.646825
NA Francci3_3974 protein of unknown function DUF305chromosome CDS4755618 816 + 0.72549
NA Francci3_2903 protein of unknown function DUF124chromosome CDS3418410 678 - 0.684366
NA Francci3_2396 conserved hypothetical proteinchromosome CDS2774609 393 - 0.707379
NA Francci3_1911 ErfK/YbiS/YcfS/YnhGchromosome CDS2244427 1395 + 0.717563
NA Francci3_1277 protein of unknown function DUF218chromosome CDS1526646 738 + 0.677507
NA Francci3_4438 protein of unknown function DUF881chromosome CDS5306000 990 - 0.753535
NA Francci3_4175 nuclear export factor GLE1chromosome CDS4978462 714 - 0.679272
NA Francci3_2815 conserved hypothetical proteinchromosome CDS3315679 396 - 0.704545
NA Francci3_0031 Uncharacterized membrane-associated protein-likechromosome CDS37685 807 + 0.641883
NA Francci3_3457 Allergen V5/Tpx-1 relatedchromosome CDS4120717 1017 + 0.720747
NA Francci3_0376 protein of unknown function DUF307chromosome CDS442980 405 + 0.639506
NA Francci3_2580 conserved hypothetical proteinchromosome CDS3045741 210 + 0.685714
NA Francci3_3565 protein of unknown function DUF150chromosome CDS4263682 807 - 0.726146
NA Francci3_0673 filamentation induced by cAMP protein Ficchromosome CDS769071 1197 + 0.639098
NA Francci3_3242 conserved hypothetical proteinchromosome CDS3836879 798 + 0.709273
NA Francci3_1012 protein of unknown function DUF323chromosome CDS1206129 1443 + 0.689536
NA Francci3_2451 MbtH-like proteinchromosome CDS2859026 231 - 0.606061
NA Francci3_3247 conserved hypothetical proteinchromosome CDS3845072 1023 + 0.687195
NA Francci3_1466 protein of unknown function DUF881chromosome CDS1758717 891 + 0.746352
NA Francci3_2227 conserved hypothetical proteinchromosome CDS2600772 345 + 0.710145
NA Francci3_4074 membrane protein-likechromosome CDS4878337 2670 + 0.718727
NA Francci3_2006 Antibiotic biosynthesis monooxygenasechromosome CDS2355694 327 - 0.642202
NA Francci3_0478 protein of unknown function DUF62chromosome CDS559632 870 + 0.694253
NA Francci3_1254 protein of unknown function DUF159chromosome CDS1498412 1017 + 0.729597
NA Francci3_3693 hypothetical proteinchromosome CDS4428630 636 - 0.740566
NA Francci3_3912 conserved hypothetical proteinchromosome CDS4681722 1050 + 0.711429
NA Francci3_2745 protein of unknown function DUF470chromosome CDS3233966 1932 - 0.70911
NA Francci3_2616 protein of unknown function UPF0016chromosome CDS3089337 720 - 0.702778
NA Francci3_4481 protein of unknown function DUF683chromosome CDS5352184 267 - 0.726592
NA Francci3_1964 protein of unknown function DUF1003chromosome CDS2305621 537 + 0.672253
NA Francci3_1067 hypothetical proteinchromosome CDS1271803 624 - 0.6875
NA Francci3_1610 protein of unknown function DUF305chromosome CDS1931818 660 - 0.663636
NA Francci3_1279 conserved hypothetical proteinchromosome CDS1529591 540 - 0.624074
NA Francci3_0804 protein of unknown function DUF1275chromosome CDS935991 720 - 0.713889
NA Francci3_0756 putative membrane proteinchromosome CDS879910 1011 + 0.70821
NA Francci3_1635 conserved hypothetical proteinchromosome CDS1966866 1083 + 0.751616
NA Francci3_3950 LmbE-like proteinchromosome CDS4729519 654 - 0.697248
NA Francci3_1465 protein of unknown function DUF1290chromosome CDS1758382 333 + 0.684685
NA Francci3_1368 protein of unknown function DUF28chromosome CDS1643082 756 + 0.67328
NA Francci3_1682 SpoVT/AbrB-likechromosome CDS2019048 249 - 0.694779
NA Francci3_1336 Chlorite dismutasechromosome CDS1603928 696 + 0.693965
NA Francci3_0232 FMN-bindingchromosome CDS272340 519 + 0.722543
NA Francci3_2863 protein of unknown function DUF445chromosome CDS3373930 1302 + 0.709677
NA Francci3_2841 Zeta toxinchromosome CDS3347359 1353 + 0.65558
NA Francci3_3661 Endonuclease/exonuclease/phosphatasechromosome CDS4381824 1071 + 0.712418
NA Francci3_3634 hypothetical proteinchromosome CDS4339977 297 + 0.609428
NA Francci3_2435 hypothetical proteinchromosome CDS2829310 843 + 0.695136
NA Francci3_3035 protein of unknown function DUF125, transmembranechromosome CDS3601674 792 + 0.738636
NA Francci3_4077 protein of unknown function DUF574chromosome CDS4882550 816 + 0.642157
NA Francci3_3541 putative membrane proteinchromosome CDS4230134 870 - 0.729885
NA Francci3_0560 AIG2-likechromosome CDS651539 453 + 0.728477
NA Francci3_1058 protein of unknown function DUF343chromosome CDS1260690 183 - 0.655738
NA Francci3_0665 protein of unknown function DUF1003chromosome CDS761569 1047 - 0.677173
NA Francci3_4363 putative integral membrane proteinchromosome CDS5211144 696 - 0.711207
NA Francci3_2284 TM2chromosome CDS2664251 447 - 0.684564
NA Francci3_3402 YbaK/prolyl-tRNA synthetase-like proteinchromosome CDS4034183 489 + 0.695297
NA Francci3_3165 Uncharacterised conserved protein UCP033563chromosome CDS3744206 1332 + 0.728228
NA Francci3_3289 protein of unknown function DUF72chromosome CDS3897034 852 - 0.644366
NA Francci3_0917 conserved hypothetical proteinchromosome CDS1059797 1344 - 0.708333
NA Francci3_0864 ATP-dependent Clp protease adaptor protein ClpSchromosome CDS1008715 360 + 0.625
NA Francci3_3957 protein of unknown function DUF322chromosome CDS4734700 486 - 0.699588
NA Francci3_3327 Peptidoglycan-binding LysMchromosome CDS3942491 3372 - 0.746738
NA Francci3_4525 putative membrane proteinchromosome CDS5398829 1890 - 0.698413
NA Francci3_0394 Cupin 4chromosome CDS467350 1221 + 0.583948
NA Francci3_2902 protein of unknown function DUF124chromosome CDS3417342 984 - 0.693089
NA Francci3_3230 protein of unknown function DUF470chromosome CDS3824291 1086 + 0.63628
NA Francci3_1266 protein of unknown function DUF558chromosome CDS1512636 693 + 0.744589
NA Francci3_2911 Enzymatic protein of unknown functionchromosome CDS3428334 2586 - 0.717711
NA Francci3_4177 protein of unknown function DUF347chromosome CDS4980149 960 - 0.645833
NA Francci3_3735 putative membrane proteinchromosome CDS4471707 819 + 0.695971
NA Francci3_0389 conserved hypothetical proteinchromosome CDS460759 393 + 0.681934
NA Francci3_1436 protein of unknown function DUF34chromosome CDS1729214 1041 + 0.751201
NA Francci3_0935 hypothetical proteinchromosome CDS1098769 837 + 0.702509
NA Francci3_4358 membrane-flanked domainchromosome CDS5205069 1332 + 0.718468
NA Francci3_1233 Iojap-related proteinchromosome CDS1477355 591 + 0.720812
NA Francci3_3123 putative integral membrane proteinchromosome CDS3694949 630 + 0.734921
NA Francci3_1980 putative membrane proteinchromosome CDS2325150 1344 + 0.668155
NA Francci3_4276 GatB/Yqeychromosome CDS5105287 459 + 0.718954
NA Francci3_4042 conserved hypothetical proteinchromosome CDS4827541 378 + 0.685185
NA Francci3_4471 alkylhydroperoxidasechromosome CDS5342159 450 + 0.726667
NA Francci3_0158 conserved hypothetical proteinchromosome CDS185247 3429 - 0.672499
NA Francci3_2323 protein of unknown function DUF190chromosome CDS2702165 345 - 0.698551
NA Francci3_3967 protein of unknown function DUF218chromosome CDS4747331 651 + 0.734255
NA Francci3_0259 CHADchromosome CDS299713 1569 + 0.727852
NA Francci3_4514 conserved hypothetical proteinchromosome CDS5388473 1080 + 0.689815
NA Francci3_1452 chromosome segregation and condensation protein ScpAchromosome CDS1743372 945 + 0.722751
NA Francci3_4503 DoxXchromosome CDS5375223 594 + 0.727273
NA Francci3_2568 hypothetical proteinchromosome CDS3027169 600 - 0.691667