Gene list
Applied filters:
COG category: Function unknown
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab
Number of genes found: 162
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| Show UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
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| Synechococcus sp. JA-3-3Ab, JA-3-3Ab | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CYA_0901 | conserved hypothetical protein | chromosome | CDS | 908362 | 5139 | - | 0.65791 |
| NA | CYA_2736 | conserved hypothetical protein | chromosome | CDS | 2752181 | 285 | - | 0.617544 |
| NA | CYA_2202 | conserved hypothetical protein | chromosome | CDS | 2219797 | 327 | - | 0.574924 |
| NA | CYA_0720 | conserved hypothetical protein | chromosome | CDS | 727212 | 432 | - | 0.615741 |
| NA | CYA_0183 | conserved hypothetical protein | chromosome | CDS | 182785 | 1329 | + | 0.634311 |
| NA | CYA_2778 | conserved hypothetical protein | chromosome | CDS | 2796655 | 393 | - | 0.62341 |
| NA | CYA_2332 | nuclear export factor GLE1-like protein | chromosome | CDS | 2335568 | 567 | + | 0.599647 |
| NA | CYA_0241 | putative membrane protein | chromosome | CDS | 244138 | 1410 | + | 0.643972 |
| NA | CYA_0279 | conserved hypothetical protein | chromosome | CDS | 285646 | 423 | + | 0.605201 |
| NA | CYA_1998 | conserved hypothetical protein | chromosome | CDS | 2014781 | 1227 | + | 0.629177 |
| NA | CYA_2551 | conserved hypothetical protein | chromosome | CDS | 2571628 | 609 | + | 0.489327 |
| NA | CYA_0935 | conserved hypothetical protein | chromosome | CDS | 945552 | 492 | - | 0.560976 |
| NA | CYA_1208 | pentapeptide repeat family protein | chromosome | CDS | 1217481 | 492 | - | 0.642276 |
| NA | CYA_1889 | conserved hypothetical protein | chromosome | CDS | 1896634 | 783 | - | 0.624521 |
| NA | CYA_1848 | conserved domain protein | chromosome | CDS | 1849177 | 873 | + | 0.618557 |
| NA | CYA_2854 | polysaccharide pyruvyl transferase | chromosome | CDS | 2869616 | 1080 | - | 0.647222 |
| NA | CYA_2536 | conserved hypothetical protein | chromosome | CDS | 2555606 | 423 | + | 0.553191 |
| NA | CYA_2613 | putative membrane protein | chromosome | CDS | 2629189 | 660 | + | 0.483333 |
| NA | CYA_1095 | hypothetical protein | chromosome | CDS | 1118160 | 390 | - | 0.635897 |
| NA | CYA_2403 | pentapeptide repeat family protein | chromosome | CDS | 2412534 | 360 | - | 0.613889 |
| NA | CYA_0664 | putative membrane protein | chromosome | CDS | 671834 | 672 | + | 0.619048 |
| NA | CYA_2901 | conserved hypothetical protein | chromosome | CDS | 2926369 | 588 | - | 0.581633 |
| NA | CYA_1408 | conserved hypothetical protein | chromosome | CDS | 1413771 | 828 | + | 0.650966 |
| NA | CYA_0560 | putative membrane protein | chromosome | CDS | 572078 | 351 | + | 0.532764 |
| NA | CYA_1155 | PRC-barrel domain protein | chromosome | CDS | 1178651 | 894 | + | 0.604027 |
| NA | CYA_1269 | conserved hypothetical protein TIGR00023 | chromosome | CDS | 1284501 | 612 | - | 0.678105 |
| NA | CYA_1267 | conserved hypothetical protein | chromosome | CDS | 1284112 | 345 | - | 0.64058 |
| NA | CYA_0418 | pentapeptide repeat family protein | chromosome | CDS | 437609 | 495 | - | 0.640404 |
| NA | CYA_0899 | conserved hypothetical protein | chromosome | CDS | 907420 | 354 | - | 0.454802 |
| NA | CYA_0378 | conserved hypothetical protein | chromosome | CDS | 394648 | 546 | + | 0.608059 |
| NA | CYA_2799 | NnrU family protein | chromosome | CDS | 2817785 | 717 | + | 0.578801 |
| NA | CYA_2457 | hypothetical protein | chromosome | CDS | 2464589 | 1839 | + | 0.643828 |
| NA | CYA_0139 | conserved hypothetical protein | chromosome | CDS | 134674 | 573 | - | 0.61082 |
| NA | CYA_0930 | CbiX family protein | chromosome | CDS | 939523 | 900 | - | 0.632222 |
| NA | CYA_2537 | conserved hypothetical protein | chromosome | CDS | 2556041 | 1431 | + | 0.595388 |
| NA | CYA_2215 | pentapeptide repeat family protein | chromosome | CDS | 2228768 | 747 | - | 0.601071 |
| NA | CYA_2594 | conserved hypothetical protein TIGR00278 | chromosome | CDS | 2616763 | 303 | + | 0.663366 |
| NA | CYA_2550 | conserved hypothetical protein | chromosome | CDS | 2571016 | 585 | + | 0.531624 |
| NA | CYA_1039 | conserved hypothetical protein DUF403 | chromosome | CDS | 1058181 | 996 | + | 0.544177 |
| NA | CYA_1369 | conserved hypothetical protein TIGR00103 | chromosome | CDS | 1380327 | 336 | - | 0.60119 |
| NA | CYA_1810 | putative membrane protein | chromosome | CDS | 1811890 | 2556 | + | 0.622848 |
| NA | CYA_1152 | conserved hypothetical protein | chromosome | CDS | 1176173 | 429 | + | 0.599068 |
| NA | CYA_1579 | hypothetical protein | chromosome | CDS | 1589130 | 432 | - | 0.430556 |
| NA | CYA_1004 | peptidase propeptide/YPEB domain protein | chromosome | CDS | 1018222 | 357 | - | 0.507003 |
| NA | CYA_1423 | conserved hypothetical protein | chromosome | CDS | 1430501 | 675 | - | 0.598518 |
| NA | CYA_0034 | conserved hypothetical protein | chromosome | CDS | 32567 | 654 | + | 0.599388 |
| NA | CYA_1332 | conserved hypothetical protein | chromosome | CDS | 1346103 | 1572 | - | 0.594148 |
| NA | CYA_0973 | conserved hypothetical protein | chromosome | CDS | 985155 | 1221 | - | 0.609337 |
| NA | CYA_1565 | conserved hypothetical protein | chromosome | CDS | 1574337 | 330 | + | 0.566667 |
| NA | CYA_0116 | conserved hypothetical protein | chromosome | CDS | 110298 | 924 | - | 0.617965 |
| NA | CYA_0127 | conserved hypothetical protein | chromosome | CDS | 119457 | 246 | + | 0.53252 |
| NA | CYA_0338 | conserved hypothetical protein | chromosome | CDS | 356934 | 732 | - | 0.687158 |
| NA | CYA_2259 | conserved hypothetical protein TIGR01033 | chromosome | CDS | 2267426 | 750 | - | 0.604 |
| NA | CYA_1197 | putative membrane protein | chromosome | CDS | 1209705 | 807 | - | 0.639405 |
| NA | CYA_0292 | RNase3 domain protein | chromosome | CDS | 298516 | 432 | - | 0.601852 |
| NA | CYA_1150 | pentapeptide repeat family protein | chromosome | CDS | 1173595 | 477 | - | 0.633124 |
| NA | CYA_2494 | conserved hypothetical protein | chromosome | CDS | 2503583 | 819 | + | 0.661783 |
| NA | CYA_1566 | conserved hypothetical protein | chromosome | CDS | 1576088 | 1170 | - | 0.657265 |
| NA | CYA_1073 | glycosyl transferase, group 2 | chromosome | CDS | 1090358 | 1224 | - | 0.57598 |
| NA | CYA_0949 | pentapeptide repeat family protein | chromosome | CDS | 960752 | 498 | - | 0.668675 |
| NA | CYA_0092 | conserved hypothetical integral membrane protein | chromosome | CDS | 89675 | 693 | - | 0.594517 |
| NA | CYA_0583 | conserved hypothetical protein | chromosome | CDS | 594944 | 525 | - | 0.504762 |
| NA | CYA_2476 | DoxX family protein | chromosome | CDS | 2486028 | 555 | + | 0.612613 |
| NA | CYA_0407 | pentapeptide repeat family protein | chromosome | CDS | 422501 | 531 | + | 0.600753 |
| NA | CYA_1539 | conserved hypothetical protein | chromosome | CDS | 1548851 | 663 | + | 0.594269 |
| NA | CYA_2423 | conserved domain protein | chromosome | CDS | 2432987 | 372 | - | 0.577957 |
| NA | CYA_0677 | mgtC family protein | chromosome | CDS | 685207 | 702 | + | 0.594017 |
| NA | CYA_1455 | conserved hypothetical protein | chromosome | CDS | 1458692 | 1932 | + | 0.673913 |
| NA | CYA_0843 | conserved hypothetical protein | chromosome | CDS | 852141 | 579 | + | 0.613126 |
| NA | CYA_0464 | conserved hypothetical protein | chromosome | CDS | 479156 | 597 | - | 0.58794 |
| NA | CYA_0950 | conserved hypothetical protein TIGR00299 | chromosome | CDS | 961326 | 1194 | + | 0.646566 |
| NA | CYA_1719 | conserved hypothetical protein | chromosome | CDS | 1724940 | 417 | + | 0.625899 |
| NA | CYA_0450 | conserved hypothetical protein | chromosome | CDS | 469759 | 546 | - | 0.617216 |
| NA | CYA_0140 | conserved hypothetical protein | chromosome | CDS | 135265 | 642 | - | 0.607477 |
| NA | CYA_0380 | conserved hypothetical protein | chromosome | CDS | 395885 | 837 | + | 0.555556 |
| NA | CYA_0587 | conserved hypothetical protein | chromosome | CDS | 599119 | 285 | + | 0.603509 |
| NA | CYA_2726 | putative outer membrane protein | chromosome | CDS | 2741783 | 717 | + | 0.62622 |
| NA | CYA_1894 | conserved hypothetical protein | chromosome | CDS | 1902123 | 1341 | - | 0.628635 |
| NA | CYA_2388 | conserved hypothetical protein | chromosome | CDS | 2398539 | 522 | - | 0.586207 |
| NA | CYA_1110 | pentapeptide repeat family protein | chromosome | CDS | 1137368 | 1218 | + | 0.678161 |
| NA | CYA_0088 | carbohydrate kinase family protein | chromosome | CDS | 84592 | 1587 | + | 0.666667 |
| NA | CYA_1107 | putative iron-sulfur cluster-binding protein | chromosome | CDS | 1132684 | 417 | - | 0.539568 |
| NA | CYA_0393 | hypothetical protein | chromosome | CDS | 408404 | 384 | - | 0.617188 |
| NA | CYA_0273 | conserved hypothetical protein | chromosome | CDS | 279449 | 546 | + | 0.575092 |
| NA | CYA_1760 | TM2 domain protein | chromosome | CDS | 1765417 | 498 | + | 0.614458 |
| NA | CYA_0448 | CobQ/CobB/MinD/ParA nucleotide binding domain protein | chromosome | CDS | 467763 | 1323 | + | 0.446712 |
| NA | CYA_0138 | conserved hypothetical protein, truncation | chromosome | CDS | 134068 | 294 | - | 0.544218 |
| NA | CYA_1789 | S4 domain protein | chromosome | CDS | 1789887 | 789 | - | 0.604563 |
| NA | CYA_0824 | conserved hypothetical protein | chromosome | CDS | 837615 | 426 | - | 0.629108 |
| NA | CYA_2284 | pentapeptide repeat family protein | chromosome | CDS | 2289492 | 465 | - | 0.621505 |
| NA | CYA_2241 | conserved hypothetical protein | chromosome | CDS | 2253781 | 489 | + | 0.593047 |
| NA | CYA_1962 | conserved hypothetical protein | chromosome | CDS | 1972842 | 1047 | - | 0.643744 |
| NA | CYA_1985 | pyridoxamine 5'-phosphate oxidase family protein | chromosome | CDS | 2004448 | 618 | - | 0.606796 |
| NA | CYA_2278 | conserved domain protein | chromosome | CDS | 2285309 | 438 | - | 0.573059 |
| NA | CYA_0861 | conserved hypothetical protein | chromosome | CDS | 868983 | 570 | + | 0.622807 |
| NA | CYA_1980 | pentapeptide repeat family protein | chromosome | CDS | 1998386 | 1116 | + | 0.678315 |
| NA | CYA_0986 | Rho termination factor, N-terminal domain | chromosome | CDS | 1000284 | 1287 | - | 0.625486 |
| NA | CYA_1617 | hypothetical protein | chromosome | CDS | 1621688 | 414 | + | 0.603865 |
| NA | CYA_2067 | conserved hypothetical protein | chromosome | CDS | 2087286 | 1026 | + | 0.546784 |
| NA | CYA_1102 | MAPEG family protein | chromosome | CDS | 1128533 | 459 | - | 0.653595 |
| NA | CYA_0658 | conserved hypothetical protein | chromosome | CDS | 667502 | 582 | + | 0.542955 |
| NA | CYA_1907 | conserved hypothetical protein | chromosome | CDS | 1916902 | 732 | + | 0.620219 |
| NA | CYA_0793 | pentapeptide repeat family protein | chromosome | CDS | 802085 | 993 | + | 0.644512 |
| NA | CYA_2696 | conserved hypothetical protein | chromosome | CDS | 2711745 | 270 | + | 0.592593 |
| NA | CYA_1999 | hypothetical protein | chromosome | CDS | 2015755 | 510 | + | 0.603922 |
| NA | CYA_1431 | pentapeptide repeat family protein | chromosome | CDS | 1437521 | 507 | + | 0.654832 |
| NA | CYA_0500 | putative glutamate--cysteine ligase | chromosome | CDS | 515750 | 1107 | + | 0.641373 |
| NA | CYA_0329 | conserved hypothetical protein | chromosome | CDS | 346459 | 690 | - | 0.598551 |
| NA | CYA_0706 | putative membrane protein | chromosome | CDS | 713715 | 636 | - | 0.599057 |
| NA | CYA_2072 | glycosyl hydrolase, family 57 | chromosome | CDS | 2091300 | 1608 | + | 0.60199 |
| NA | CYA_0321 | conserved hypothetical protein | chromosome | CDS | 333924 | 4578 | - | 0.619484 |
| NA | CYA_1281 | conserved hypothetical protein | chromosome | CDS | 1291390 | 246 | + | 0.585366 |
| NA | CYA_0749 | carboxymuconolactone decarboxylase family protein | chromosome | CDS | 756755 | 558 | - | 0.598566 |
| NA | CYA_2743 | conserved hypothetical protein | chromosome | CDS | 2763846 | 645 | + | 0.592248 |
| NA | CYA_2364 | hypothetical protein | chromosome | CDS | 2373011 | 741 | - | 0.554656 |
| NA | CYA_1909 | conserved hypothetical protein | chromosome | CDS | 1918914 | 1188 | + | 0.555556 |
| NA | CYA_1941 | conserved hypothetical protein | chromosome | CDS | 1951778 | 1155 | - | 0.632035 |
| NA | CYA_1336 | conserved hypothetical protein | chromosome | CDS | 1349640 | 678 | + | 0.654867 |
| NA | CYA_2894 | conserved hypothetical protein TIGR00159 | chromosome | CDS | 2918703 | 924 | - | 0.603896 |
| NA | CYA_2103 | conserved hypothetical protein | chromosome | CDS | 2119978 | 846 | - | 0.659574 |
| NA | CYA_0580 | iojap protein | chromosome | CDS | 591848 | 339 | - | 0.522124 |
| NA | CYA_1013 | conserved hypothetical protein | chromosome | CDS | 1032528 | 726 | - | 0.573003 |
| NA | CYA_1707 | conserved hypothetical protein | chromosome | CDS | 1715835 | 426 | + | 0.600939 |
| NA | CYA_1022 | leucine rich repeat protein | chromosome | CDS | 1041547 | 891 | + | 0.627385 |
| NA | CYA_2277 | conserved hypothetical protein | chromosome | CDS | 2284760 | 498 | + | 0.594378 |
| NA | CYA_1715 | conserved hypothetical protein TIGR00726 | chromosome | CDS | 1722402 | 813 | - | 0.642066 |
| NA | CYA_1041 | conserved hypothetical protein | chromosome | CDS | 1060292 | 1458 | - | 0.599451 |
| NA | CYA_1728 | conserved hypothetical protein | chromosome | CDS | 1732498 | 582 | - | 0.513746 |
| NA | CYA_0968 | conserved hypothetical protein | chromosome | CDS | 980254 | 462 | - | 0.603896 |
| NA | CYA_2258 | conserved hypothetical protein | chromosome | CDS | 2267109 | 312 | + | 0.532051 |
| NA | CYA_2295 | conserved hypothetical protein | chromosome | CDS | 2297213 | 870 | + | 0.582759 |
| NA | CYA_0910 | conserved hypothetical protein | chromosome | CDS | 918955 | 1359 | - | 0.633554 |
| NA | CYA_0202 | pentapeptide repeat family protein | chromosome | CDS | 207609 | 591 | - | 0.651438 |
| NA | CYA_1540 | conserved hypothetical protein | chromosome | CDS | 1549537 | 666 | + | 0.588589 |
| NA | CYA_0234 | conserved hypothetical protein | chromosome | CDS | 236956 | 570 | + | 0.605263 |
| NA | CYA_1838 | conserved hypothetical protein | chromosome | CDS | 1840269 | 264 | + | 0.575758 |
| NA | CYA_2831 | CHAD domain protein | chromosome | CDS | 2849659 | 987 | + | 0.598784 |
| NA | CYA_1695 | putative membrane protein | chromosome | CDS | 1696037 | 1449 | + | 0.530021 |
| NA | CYA_1912 | conserved hypothetical protein | chromosome | CDS | 1921739 | 642 | + | 0.557632 |
| NA | CYA_1665 | YihY family protein | chromosome | CDS | 1668088 | 975 | + | 0.598974 |
| NA | CYA_2611 | oxidoreductase, 2OG-Fe(II) oxygenase family | chromosome | CDS | 2628153 | 675 | - | 0.505185 |
| NA | CYA_0772 | conserved hypothetical protein | chromosome | CDS | 779226 | 831 | - | 0.610108 |
| NA | CYA_2293 | putative cyclase/dehydrase | chromosome | CDS | 2296553 | 468 | - | 0.606838 |
| NA | CYA_0498 | putative membrane protein | chromosome | CDS | 512911 | 1278 | - | 0.564163 |
| NA | CYA_1492 | conserved hypothetical protein | chromosome | CDS | 1498421 | 495 | + | 0.666667 |
| NA | CYA_1655 | iron-sulfur cluster assembly accessory protein | chromosome | CDS | 1652092 | 357 | + | 0.596639 |
| NA | CYA_1019 | hypothetical protein | chromosome | CDS | 1036398 | 1020 | + | 0.595098 |
| NA | CYA_0812 | S4 domain protein | chromosome | CDS | 823732 | 282 | + | 0.638298 |
| NA | CYA_1532 | putative membrane protein | chromosome | CDS | 1543567 | 876 | + | 0.635845 |
| NA | CYA_0304 | NHL repeat domain protein | chromosome | CDS | 308636 | 1914 | + | 0.66092 |
| NA | CYA_1292 | conserved domain protein | chromosome | CDS | 1301241 | 297 | + | 0.589226 |
| NA | CYA_0476 | pentapeptide repeat family protein | chromosome | CDS | 493284 | 378 | - | 0.616402 |
| NA | CYA_0678 | putative membrane protein | chromosome | CDS | 686139 | 624 | - | 0.594551 |
| NA | CYA_0456 | conserved hypothetical protein | chromosome | CDS | 471902 | 474 | + | 0.609705 |
| cas6 | CYA_0883 | CRISPR-associated protein Cas6 | chromosome | CDS | 887772 | 1152 | + | 0.633681 |
| cbiX | CYA_2373 | sirohydrochlorin cobaltochelatase | chromosome | CDS | 2383610 | 1029 | + | 0.622935 |
| clpS-1 | CYA_1385 | ATP-dependent Clp protease adaptor protein ClpS | chromosome | CDS | 1392525 | 306 | - | 0.614379 |
| clpS-2 | CYA_2507 | ATP-dependent Clp protease adaptor protein ClpS | chromosome | CDS | 2519672 | 282 | + | 0.592199 |
| pds | CYA_0316 | phytoene desaturase | chromosome | CDS | 325273 | 1419 | + | 0.630726 |
| psaK | CYA_1932 | photosystem I reaction center protein PsaK | chromosome | CDS | 1945381 | 246 | + | 0.609756 |
| scpA | CYA_2302 | segregation and condensation protein A | chromosome | CDS | 2304173 | 756 | - | 0.582011 |
| zds | CYA_0668 | carotene 7,8-desaturase | chromosome | CDS | 678143 | 1452 | - | 0.626722 |
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