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2024-05-07 23:04:52

Gene list

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COG category: Function unknown
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 127

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_1000 Zinc finger, CDGSH-typechromosome CDS1051804 291 - 0.378007
NA Tmden_1389 Protein of unknown function DUF28chromosome CDS1459410 711 - 0.337553
NA Tmden_1353 Protein of unknown function DUF497chromosome CDS1425777 294 + 0.289116
NA Tmden_0035 cytoplasmic membrane proteinchromosome CDS42048 372 + 0.362903
NA Tmden_0678 Protein of unknown function DUF150chromosome CDS691919 450 + 0.344444
NA Tmden_2061 conserved hypothetical proteinchromosome CDS2152685 447 + 0.324385
NA Tmden_0449 Protein of unknown function DUF188chromosome CDS448210 456 + 0.339912
NA Tmden_0927 hypothetical proteinchromosome CDS961873 3747 + 0.371764
NA Tmden_1461 Protein of unknown function DUF208chromosome CDS1532584 1083 + 0.34349
NA Tmden_1588 Protein of unknown function DUF262chromosome CDS1664737 1398 - 0.30329
NA Tmden_0216 conserved hypothetical proteinchromosome CDS219964 1365 + 0.383883
NA Tmden_0691 Protein of unknown function DUF262chromosome CDS702140 1398 - 0.30329
NA Tmden_0483 Pyridoxamine 5'-phosphate oxidase-related, FMN-bindingchromosome CDS488873 429 + 0.34965
NA Tmden_0931 conserved hypothetical proteinchromosome CDS971671 267 + 0.340824
NA Tmden_0373 Ribonuclease BNchromosome CDS373423 834 + 0.281775
NA Tmden_0114 Protein of unknown function DUF181chromosome CDS119250 1611 - 0.379888
NA Tmden_0185 Protein of unknown function DUF354chromosome CDS187149 1053 - 0.331434
NA Tmden_0906 Protein of unknown function DUF465chromosome CDS938980 237 + 0.278481
NA Tmden_0912 Protein of unknown function DUF167chromosome CDS947869 306 + 0.398693
NA Tmden_0769 RDD proteinchromosome CDS795514 492 - 0.321138
NA Tmden_1612 Protein of unknown function DUF523chromosome CDS1691574 948 - 0.355485
NA Tmden_1765 DoxXchromosome CDS1848244 384 - 0.369792
NA Tmden_1160 SEC-C motif domain proteinchromosome CDS1215642 447 + 0.340045
NA Tmden_0476 Protein of unknown function DUF152chromosome CDS480195 723 - 0.340249
NA Tmden_1659 Protein of unknown function DUF610, YibQchromosome CDS1742766 1095 - 0.328767
NA Tmden_0261 Twin-arginine translocation pathway signalchromosome CDS275815 468 + 0.376068
NA Tmden_0771 conserved hypothetical proteinchromosome CDS797631 801 + 0.299625
NA Tmden_0174 conserved hypothetical proteinchromosome CDS176198 1989 - 0.295626
NA Tmden_1884 Protein of unknown function DUF344chromosome CDS1964338 855 - 0.340351
NA Tmden_1933 Protein of unknown function DUF752chromosome CDS2018685 765 - 0.345098
NA Tmden_0775 hypothetical proteinchromosome CDS800940 1683 - 0.240048
NA Tmden_2028 conserved hypothetical proteinchromosome CDS2108532 1047 - 0.393505
NA Tmden_0539 Protein of unknown function DUF1016chromosome CDS541922 1080 + 0.319444
NA Tmden_0609 conserved hypothetical proteinchromosome CDS617250 492 - 0.335366
NA Tmden_1340 Pseudouridylate synthasechromosome CDS1411771 876 - 0.348174
NA Tmden_1032 Pseudouridylate synthasechromosome CDS1087552 1074 + 0.327747
NA Tmden_1878 conserved hypothetical proteinchromosome CDS1958037 354 - 0.370057
NA Tmden_0635 Uncharacterized protein UPF0114chromosome CDS646430 519 - 0.33526
NA Tmden_0548 MOSCchromosome CDS551976 693 - 0.363636
NA Tmden_0811 Protein of unknown function UPF0150chromosome CDS844796 303 + 0.313531
NA Tmden_0312 conserved hypothetical proteinchromosome CDS316108 849 - 0.347468
NA Tmden_1897 hypothetical proteinchromosome CDS1978506 483 - 0.349896
NA Tmden_1850 AMMECR1chromosome CDS1932522 573 - 0.364747
NA Tmden_0477 Protein of unknown function DUF323chromosome CDS480946 2106 + 0.368471
NA Tmden_1805 hypothetical proteinchromosome CDS1885606 468 - 0.337607
NA Tmden_2103 sensory box proteinchromosome CDS2199948 966 - 0.364389
NA Tmden_1019 TrkA-Cchromosome CDS1072367 1407 + 0.308458
NA Tmden_1479 Protein of unknown function DUF497chromosome CDS1552319 318 - 0.327044
NA Tmden_1172 Protein of unknown function DUF163chromosome CDS1227070 459 - 0.30719
NA Tmden_1217 conserved hypothetical proteinchromosome CDS1284178 390 + 0.305128
NA Tmden_0732 GatB/Yqeychromosome CDS753617 444 - 0.358108
NA Tmden_2021 conserved hypothetical proteinchromosome CDS2103481 270 + 0.337037
NA Tmden_2032 YceIchromosome CDS2118452 579 + 0.343696
NA Tmden_2102 Protein of unknown function DUF1255chromosome CDS2199610 312 - 0.355769
NA Tmden_0246 hypothetical proteinchromosome CDS261123 1281 - 0.434817
NA Tmden_0774 Filamentation induced by cAMP protein Ficchromosome CDS800252 687 - 0.311499
NA Tmden_0227 Filamentation induced by cAMP protein Ficchromosome CDS236979 1131 - 0.381079
NA Tmden_1837 TM2chromosome CDS1919753 447 + 0.346756
NA Tmden_0391 conserved hypothetical proteinchromosome CDS391281 423 + 0.345154
NA Tmden_0039 Protein of unknown function DUF520chromosome CDS47477 498 + 0.323293
NA Tmden_1788 Protein of unknown function DUF819chromosome CDS1870755 1131 - 0.355438
NA Tmden_1695 integral membrane proteinchromosome CDS1775770 573 + 0.319372
NA Tmden_1202 conserved hypothetical proteinchromosome CDS1268189 981 - 0.334353
NA Tmden_0493 Hemerythrin HHE cation binding regionchromosome CDS496106 441 + 0.369615
NA Tmden_0523 Protein of unknown function DUF37chromosome CDS522905 345 + 0.304348
NA Tmden_1448 Protein of unknown function DUF488chromosome CDS1518159 363 + 0.369146
NA Tmden_0140 Protein of unknown function DUF195chromosome CDS144244 1224 - 0.375817
NA Tmden_2058 sulfur oxidation proteinchromosome CDS2149411 453 - 0.384106
NA Tmden_1781 conserved hypothetical proteinchromosome CDS1863640 1113 - 0.356694
NA Tmden_1860 putative proteinchromosome CDS1943493 444 + 0.344595
NA Tmden_1745 Protein of unknown function DUF374chromosome CDS1829510 624 - 0.358974
NA Tmden_1532 Metallophosphoesterasechromosome CDS1605281 738 - 0.296748
NA Tmden_1481 Antibiotic biosynthesis monooxygenasechromosome CDS1553371 288 - 0.375
NA Tmden_0267 conserved hypothetical proteinchromosome CDS281195 435 + 0.333333
NA Tmden_1806 DedAchromosome CDS1886066 612 - 0.361111
NA Tmden_1756 Iojap-related proteinchromosome CDS1839316 336 + 0.330357
NA Tmden_1368 conserved hypothetical proteinchromosome CDS1439399 288 + 0.319444
NA Tmden_1455 Protein of unknown function DUF485chromosome CDS1527264 315 - 0.31746
NA Tmden_1861 Protein of unknown function DUF89chromosome CDS1943941 858 - 0.331002
NA Tmden_0458 ATP-dependent Clp protease adaptor protein ClpSchromosome CDS461343 300 - 0.316667
NA Tmden_1060 Protein of unknown function YGGTchromosome CDS1124925 285 + 0.301754
NA Tmden_1717 Protein of unknown function DUF497chromosome CDS1799640 309 + 0.291262
NA Tmden_1013 conserved hypothetical proteinchromosome CDS1066828 333 - 0.309309
NA Tmden_1252 Protein of unknown function DUF185chromosome CDS1319975 972 - 0.316872
NA Tmden_1561 Metallophosphoesterasechromosome CDS1634436 810 - 0.371605
NA Tmden_0335 conserved hypothetical proteinchromosome CDS334303 309 + 0.378641
NA Tmden_0077 PDP proteinchromosome CDS84037 513 + 0.333333
NA Tmden_0089 conserved hypothetical proteinchromosome CDS95702 234 + 0.350427
NA Tmden_0666 Protein of unknown function DUF205chromosome CDS680492 615 - 0.390244
NA Tmden_0138 FlhB domain proteinchromosome CDS143741 252 + 0.380952
NA Tmden_0917 conserved hypothetical proteinchromosome CDS953998 702 + 0.367521
NA Tmden_0412 Protein of unknown function DUF180chromosome CDS409777 381 - 0.322835
NA Tmden_1580 Protein of unknown function UPF0126chromosome CDS1656573 612 + 0.372549
NA Tmden_0444 Protein of unknown function DUF34chromosome CDS444572 723 + 0.316736
NA Tmden_1039 hypothetical proteinchromosome CDS1096506 393 + 0.282443
NA Tmden_1859 Alkylhydroperoxidase AhpD corechromosome CDS1942960 531 + 0.355932
NA Tmden_0256 conserved hypothetical proteinchromosome CDS271797 465 + 0.329032
NA Tmden_1379 conserved hypothetical proteinchromosome CDS1448679 966 + 0.29089
NA Tmden_1832 Cobalamin (vitamin B12) biosynthesis CbiX proteinchromosome CDS1914913 351 - 0.336182
NA Tmden_1911 conserved hypothetical proteinchromosome CDS1993040 678 - 0.349558
NA Tmden_1248 conserved hypothetical proteinchromosome CDS1316798 960 - 0.321875
NA Tmden_0425 RDD proteinchromosome CDS426346 450 + 0.32
NA Tmden_1245 conserved hypothetical proteinchromosome CDS1314464 687 - 0.362445
NA Tmden_0275 Polyferredoxin-likechromosome CDS291635 2757 - 0.357272
NA Tmden_0079 conserved hypothetical proteinchromosome CDS86546 552 + 0.318841
NA Tmden_1838 Hemerythrin HHE cation binding regionchromosome CDS1920380 438 - 0.36758
NA Tmden_1918 RDD proteinchromosome CDS2000251 465 + 0.298925
NA Tmden_1077 OstA-like proteinchromosome CDS1138952 501 - 0.329341
NA Tmden_0268 hypothetical proteinchromosome CDS281651 906 + 0.346578
NA Tmden_0344 Protein of unknown function DUF328chromosome CDS341641 726 - 0.287879
NA Tmden_1157 Endonuclease/exonuclease/phosphatasechromosome CDS1213305 732 + 0.333333
NA Tmden_0430 Protein of unknown function DUF808chromosome CDS432652 1101 + 0.320618
NA Tmden_1309 hypothetical proteinchromosome CDS1379412 471 + 0.322718
NA Tmden_1793 conserved hypothetical proteinchromosome CDS1875393 681 + 0.337739
NA Tmden_0237 Protein of unknown function DUF195chromosome CDS243104 1881 + 0.356725
NA Tmden_1502 RNA-binding S4chromosome CDS1577330 204 - 0.343137
NA Tmden_0155 conserved hypothetical proteinchromosome CDS156433 231 + 0.341991
NA Tmden_1846 Protein of unknown function DUF475chromosome CDS1929384 1026 - 0.352827
NA Tmden_1960 conserved hypothetical proteinchromosome CDS2043371 195 + 0.379487
NA Tmden_1645 hypothetical proteinchromosome CDS1729990 993 + 0.303122
NA Tmden_0432 Cupin regionchromosome CDS435360 354 - 0.38983
NA Tmden_1370 Protein of unknown function DUF808chromosome CDS1440756 849 - 0.351001
NA Tmden_0612 conserved hypothetical proteinchromosome CDS619918 444 + 0.286036
NA Tmden_1545 putative PAS/PAC sensor proteinchromosome CDS1615684 1176 + 0.365646
NA Tmden_1847 conserved hypothetical proteinchromosome CDS1930460 318 - 0.371069
NA Tmden_1068 conserved hypothetical proteinchromosome CDS1131459 1233 + 0.330089
NA Tmden_1135 Protein of unknown function DUF490chromosome CDS1188284 2580 - 0.309302