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2024-04-27 11:53:55

Gene list

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COG category: Function unknown
Organism: Lactobacillus plantarum WCFS1, WCFS1

Number of genes found: 234

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus plantarum WCFS1, WCFS1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
asp1 lp_0929 alkaline shock proteinchromosome CDS860617 423 + 0.439716
asp2 lp_0930 alkaline shock proteinchromosome CDS861061 480 + 0.433333
asp3 lp_1597 alkaline shock proteinchromosome CDS1453557 459 + 0.416122
cps3I lp_1226 O-acetyltransferasechromosome CDS1113822 1080 + 0.487037
gtcA1 lp_1372 teichoic acid glycosylation protein (putative)chromosome CDS1254863 480 + 0.433333
gtcA2 lp_2747 teichoic acid glycosylation proteinchromosome CDS2443959 417 + 0.378897
gtcA3 lp_2989 teichoic acid glycosylation protein (putative)chromosome CDS2660124 486 - 0.438272
hlyA lp_2358 alpha-hemolysin homologchromosome CDS2129920 273 - 0.465201
lp_0004 lp_0004 unknownchromosome CDS3210 234 + 0.42735
lp_0038 lp_0038 unknownchromosome CDS40346 1326 + 0.423077
lp_0039 lp_0039 unknownchromosome CDS41683 855 + 0.450292
lp_0045 lp_0045 unknownchromosome CDS45638 480 + 0.433333
lp_0055 lp_0055 fumarate reductase, flavoprotein subunit precursorchromosome CDS52791 2370 - 0.459072
lp_0068 lp_0068 integral membrane proteinchromosome CDS66113 1344 + 0.456845
lp_0072 lp_0072 unknownchromosome CDS69943 501 - 0.45509
lp_0089 lp_0089 unknownchromosome CDS83697 747 - 0.457831
lp_0104 lp_0104 unknownchromosome CDS93016 1275 + 0.448627
lp_0139 lp_0139 unknownchromosome CDS122421 1710 + 0.442105
lp_0150 lp_0150 integral membrane proteinchromosome CDS130872 561 - 0.470588
lp_0170 lp_0170 unknownchromosome CDS146030 369 + 0.452575
lp_0208 lp_0208 unknownchromosome CDS192378 351 - 0.435897
lp_0219 lp_0219 ABC transporter subunit (putative)chromosome CDS201935 570 - 0.442105
lp_0243 lp_0243 unknownchromosome CDS218478 1347 + 0.461767
lp_0249 lp_0249 unknownchromosome CDS223764 1095 + 0.473059
lp_0260 lp_0260 unknownchromosome CDS234432 279 + 0.358423
lp_0293 lp_0293 GTP pyrophosphokinase (putative)chromosome CDS265061 693 + 0.4329
lp_0295 lp_0295 transport proteinchromosome CDS266762 4134 + 0.440735
lp_0320 lp_0320 unknownchromosome CDS295609 477 - 0.494759
lp_0338 lp_0338 unknownchromosome CDS309851 315 + 0.51746
lp_0357 lp_0357 integral membrane proteinchromosome CDS325267 369 + 0.452575
lp_0359 lp_0359 unknownchromosome CDS326288 1197 - 0.477026
lp_0450 lp_0450 unknownchromosome CDS404540 843 + 0.476868
lp_0459 lp_0459 unknownchromosome CDS412598 252 + 0.420635
lp_0472 lp_0472 integral membrane proteinchromosome CDS422195 1023 + 0.468231
lp_0479 lp_0479 unknownchromosome CDS427893 495 + 0.488889
lp_0507 lp_0507 unknownchromosome CDS453809 729 + 0.434842
lp_0515 lp_0515 unknownchromosome CDS461108 561 + 0.402852
lp_0533 lp_0533 integral membrane proteinchromosome CDS482282 507 + 0.469428
lp_0536 lp_0536 unknownchromosome CDS483855 1395 - 0.441577
lp_0555 lp_0555 unknownchromosome CDS512374 525 + 0.424762
lp_0556 lp_0556 unknownchromosome CDS512929 336 + 0.431548
lp_0570 lp_0570 unknownchromosome CDS528944 447 + 0.505593
lp_0574 lp_0574 unknownchromosome CDS531998 855 + 0.512281
lp_0583 lp_0583 unknownchromosome CDS556435 384 + 0.356771
lp_0611 lp_0611 unknownchromosome CDS582727 411 + 0.467153
lp_0673 lp_0673 prophage Lp1 protein 50chromosome CDS617134 4005 + 0.413483
lp_0690 lp_0690 integral membrane protein (putative)chromosome CDS634153 2559 + 0.445877
lp_0699 lp_0699 unknownchromosome CDS644701 309 + 0.436893
lp_0704 lp_0704 unknownchromosome CDS646950 330 + 0.451515
lp_0706 lp_0706 unknownchromosome CDS648340 348 + 0.436782
lp_0734 lp_0734 unknownchromosome CDS671785 648 - 0.479938
lp_0753 lp_0753 integral membrane proteinchromosome CDS688384 366 + 0.401639
lp_0762 lp_0762 unknownchromosome CDS696526 633 - 0.454976
lp_0778 lp_0778 integral membrane proteinchromosome CDS713782 537 + 0.420857
lp_0780 lp_0780 unknownchromosome CDS715396 1002 + 0.442116
lp_0781 lp_0781 unknownchromosome CDS716410 933 + 0.428725
lp_0804 lp_0804 unknownchromosome CDS745904 564 - 0.468085
lp_0817 lp_0817 integral membrane proteinchromosome CDS757042 666 - 0.478979
lp_0818 lp_0818 unknownchromosome CDS757892 843 + 0.45433
lp_0819 lp_0819 unknownchromosome CDS758731 978 + 0.440695
lp_0887 lp_0887 unknownchromosome CDS817887 759 + 0.408432
lp_0907 lp_0907 DedA proteinchromosome CDS837250 672 - 0.488095
lp_0923 lp_0923 cell surface protein precursorchromosome CDS854229 2421 + 0.494424
lp_0924 lp_0924 unknownchromosome CDS857134 384 + 0.479167
lp_0926 lp_0926 integral membrane proteinchromosome CDS859596 255 + 0.454902
lp_0946 lp_0946 cell surface protein precursor, GY familychromosome CDS876779 3570 - 0.489636
lp_0968 lp_0968 integral membrane proteinchromosome CDS899674 1251 + 0.466827
lp_0969 lp_0969 integral membrane proteinchromosome CDS900921 765 + 0.428758
lp_0981 lp_0981 integral membrane proteinchromosome CDS911786 327 - 0.449541
lp_0998 lp_0998 integral membrane proteinchromosome CDS921378 750 + 0.465333
lp_0999 lp_0999 integral membrane proteinchromosome CDS922161 462 + 0.471861
lp_1067 lp_1067 integral membrane proteinchromosome CDS969712 570 - 0.449123
lp_1068 lp_1068 unknownchromosome CDS970285 492 - 0.439024
lp_1070 lp_1070 lipoprotein precursorchromosome CDS973064 927 + 0.406688
lp_1079 lp_1079 DegV family proteinchromosome CDS980099 870 - 0.490805
lp_1121 lp_1121 integral membrane proteinchromosome CDS1019835 585 + 0.470085
lp_1132 lp_1132 unknownchromosome CDS1030449 636 - 0.477987
lp_1140 lp_1140 integral membrane proteinchromosome CDS1036286 549 + 0.455373
lp_1174 lp_1174 integral membrane proteinchromosome CDS1071192 921 + 0.440825
lp_1210 lp_1210 unknownchromosome CDS1102288 678 + 0.390855
lp_1260 lp_1260 integral membrane proteinchromosome CDS1145550 381 + 0.414698
lp_1277 lp_1277 integral membrane proteinchromosome CDS1161965 1056 + 0.441288
lp_1281 lp_1281 unknownchromosome CDS1165862 237 + 0.438819
lp_1332 lp_1332 integral membrane proteinchromosome CDS1225684 2952 - 0.496274
lp_1377 lp_1377 unknownchromosome CDS1260939 1638 + 0.471306
lp_1403 lp_1403 cell surface protein, ErfK familychromosome CDS1287013 612 - 0.460784
lp_1415 lp_1415 unknownchromosome CDS1295072 345 + 0.368116
lp_1417 lp_1417 unknownchromosome CDS1296693 2481 + 0.505038
lp_1425 lp_1425 fumarate reductase, flavoprotein subunit precursorchromosome CDS1304875 2439 + 0.482985
lp_1435 lp_1435 integral membrane proteinchromosome CDS1312976 2583 - 0.465738
lp_1439 lp_1439 unknownchromosome CDS1318168 561 - 0.417112
lp_1459 lp_1459 unknownchromosome CDS1335225 324 - 0.484568
lp_1532 lp_1532 unknownchromosome CDS1400251 357 + 0.509804
lp_1539 lp_1539 lipoprotein precursorchromosome CDS1405154 585 + 0.480342
lp_1552 lp_1552 integral membrane proteinchromosome CDS1418897 579 + 0.423143
lp_1566 lp_1566 unknownchromosome CDS1431090 501 + 0.427146
lp_1567 lp_1567 integral membrane proteinchromosome CDS1431707 2646 - 0.449735
lp_1572 lp_1572 unknownchromosome CDS1438266 222 + 0.463964
lp_1585 lp_1585 unknownchromosome CDS1446929 540 + 0.451852
lp_1625 lp_1625 unknownchromosome CDS1478425 363 + 0.4573
lp_1634 lp_1634 unknownchromosome CDS1490518 348 + 0.393678
lp_1697 lp_1697 extracellular proteinchromosome CDS1544901 606 + 0.412541
lp_1698 lp_1698 unknownchromosome CDS1545881 378 - 0.44709
lp_1702 lp_1702 integral membrane proteinchromosome CDS1548073 366 - 0.404372
lp_1704 lp_1704 integral membrane proteinchromosome CDS1549580 363 + 0.449036
lp_1706 lp_1706 integral membrane proteinchromosome CDS1550149 267 + 0.535581
lp_1708 lp_1708 unknownchromosome CDS1550626 222 - 0.445946
lp_1738 lp_1738 unknownchromosome CDS1577747 501 + 0.441118
lp_1753 lp_1753 unknownchromosome CDS1592456 570 + 0.412281
lp_1786 lp_1786 unknownchromosome CDS1619093 411 - 0.46472
lp_1789 lp_1789 unknownchromosome CDS1621113 852 - 0.42723
lp_1796 lp_1796 DegV family proteinchromosome CDS1627418 870 + 0.455172
lp_1798 lp_1798 integral membrane proteinchromosome CDS1628838 738 + 0.445799
lp_1807 lp_1807 unknownchromosome CDS1634293 747 + 0.432396
lp_1809 lp_1809 integral membrane proteinchromosome CDS1635165 858 - 0.505827
lp_1842 lp_1842 integral membrane proteinchromosome CDS1665238 627 + 0.440191
lp_1865 lp_1865 unknownchromosome CDS1685936 222 - 0.40991
lp_1866 lp_1866 unknownchromosome CDS1686169 645 - 0.429457
lp_1868 lp_1868 DegV family proteinchromosome CDS1687920 852 - 0.495305
lp_1886 lp_1886 unknownchromosome CDS1703817 1044 - 0.500958
lp_1887 lp_1887 integral membrane proteinchromosome CDS1705196 585 - 0.442735
lp_1890 lp_1890 unknownchromosome CDS1707382 738 - 0.457995
lp_1893 lp_1893 unknownchromosome CDS1709435 888 - 0.462838
lp_1894 lp_1894 integral membrane proteinchromosome CDS1710378 459 - 0.444444
lp_1905 lp_1905 unknownchromosome CDS1723286 1023 - 0.515152
lp_1929 lp_1929 unknownchromosome CDS1748660 390 - 0.469231
lp_1931 lp_1931 unknownchromosome CDS1750347 1680 - 0.469048
lp_1937 lp_1937 unknownchromosome CDS1756208 435 - 0.501149
lp_1949 lp_1949 integral membrane proteinchromosome CDS1765902 669 + 0.423019
lp_1972 lp_1972 unknownchromosome CDS1784788 444 - 0.432432
lp_1974 lp_1974 transcription regulator of gluconeogenic geneschromosome CDS1785694 819 + 0.457875
lp_1978 lp_1978 integral membrane proteinchromosome CDS1789980 876 - 0.442922
lp_1989 lp_1989 unknownchromosome CDS1801151 753 - 0.524568
lp_2044 lp_2044 unknownchromosome CDS1845259 477 - 0.446541
lp_2061 lp_2061 unknownchromosome CDS1863044 237 - 0.405063
lp_2062 lp_2062 unknownchromosome CDS1863378 240 - 0.454167
lp_2083 lp_2083 unknownchromosome CDS1878197 348 + 0.497126
lp_2135 lp_2135 unknownchromosome CDS1927081 303 - 0.445545
lp_2149 lp_2149 unknownchromosome CDS1941590 294 - 0.459184
lp_2157 lp_2157 unknownchromosome CDS1949735 219 + 0.401826
lp_2190 lp_2190 cell division protein (putative)chromosome CDS1977566 786 - 0.47201
lp_2191 lp_2191 cell division protein (putative)chromosome CDS1978375 261 - 0.40613
lp_2192 lp_2192 cell division protein (putative)chromosome CDS1978648 423 - 0.439716
lp_2223 lp_2223 GTP pyrophosphokinase (putative)chromosome CDS2005444 663 - 0.423831
lp_2232 lp_2232 integral membrane proteinchromosome CDS2022825 657 + 0.445967
lp_2234 lp_2234 integral membrane proteinchromosome CDS2023572 642 - 0.419003
lp_2236 lp_2236 unknownchromosome CDS2025010 630 - 0.450794
lp_2253 lp_2253 unknownchromosome CDS2037060 729 - 0.451303
lp_2254 lp_2254 unknownchromosome CDS2038006 321 - 0.53271
lp_2272 lp_2272 unknownchromosome CDS2052792 279 - 0.44086
lp_2273 lp_2273 unknownchromosome CDS2053175 297 - 0.400673
lp_2275 lp_2275 unknownchromosome CDS2053915 270 - 0.418519
lp_2290 lp_2290 integral membrane proteinchromosome CDS2066643 3069 - 0.460736
lp_2299 lp_2299 unknownchromosome CDS2076236 807 - 0.473358
lp_2304 lp_2304 unknownchromosome CDS2082328 888 - 0.440315
lp_2332 lp_2332 unknownchromosome CDS2108722 627 - 0.451356
lp_2333 lp_2333 unknownchromosome CDS2109481 465 + 0.464516
lp_2334 lp_2334 integral membrane proteinchromosome CDS2110001 627 - 0.444976
lp_2396 lp_2396 unknownchromosome CDS2161117 393 - 0.442748
lp_2409 lp_2409 prophage Lp2 protein 48chromosome CDS2171854 4074 - 0.397644
lp_2443 lp_2443 prophage Lp2 protein 14chromosome CDS2194512 432 + 0.365741
lp_2451 lp_2451 prophage Lp2 protein 6chromosome CDS2197887 1062 + 0.329567
lp_2464 lp_2464 prophage Lp3 protein 17, portal proteinchromosome CDS2207595 1101 - 0.44505
lp_2507 lp_2507 unknownchromosome CDS2240348 1344 - 0.501488
lp_2512 lp_2512 integral membrane proteinchromosome CDS2243862 561 - 0.467023
lp_2534 lp_2534 DegV family proteinchromosome CDS2260684 897 - 0.467113
lp_2574 lp_2574 integral membrane proteinchromosome CDS2291339 804 - 0.405473
lp_2589 lp_2589 unknownchromosome CDS2307806 885 - 0.438418
lp_2662 lp_2662 transcription regulator (putative)chromosome CDS2367245 504 + 0.43254
lp_2696 lp_2696 integral membrane proteinchromosome CDS2397220 1110 - 0.454955
lp_2732 lp_2732 oxidoreductase (putative)chromosome CDS2430532 1296 - 0.462963
lp_2760 lp_2760 unknownchromosome CDS2453752 636 + 0.466981
lp_2766 lp_2766 unknownchromosome CDS2457282 1092 + 0.455128
lp_2806 lp_2806 integral membrane proteinchromosome CDS2504153 516 - 0.422481
lp_2812 lp_2812 unknownchromosome CDS2509019 771 - 0.446174
lp_2813 lp_2813 unknownchromosome CDS2510375 504 + 0.488095
lp_2820 lp_2820 integral membrane proteinchromosome CDS2515302 504 - 0.509921
lp_2824 lp_2824 integral membrane proteinchromosome CDS2517967 552 - 0.480072
lp_2841 lp_2841 integral membrane proteinchromosome CDS2531145 1011 - 0.463897
lp_2852 lp_2852 4-carboxymuconolactone decarboxylase (putative)chromosome CDS2543647 321 - 0.442368
lp_2853 lp_2853 unknownchromosome CDS2544001 399 - 0.448622
lp_2901 lp_2901 integral membrane proteinchromosome CDS2577718 3321 - 0.443842
lp_2914 lp_2914 integral membrane proteinchromosome CDS2589615 1926 - 0.503634
lp_2995 lp_2995 integral membrane proteinchromosome CDS2664512 681 - 0.477239
lp_3017 lp_3017 unknownchromosome CDS2684714 348 + 0.482759
lp_3031 lp_3031 unknownchromosome CDS2695909 411 + 0.457421
lp_3032 lp_3032 unknownchromosome CDS2696333 354 + 0.420904
lp_3071 lp_3071 unknownchromosome CDS2732704 633 - 0.454976
lp_3084 lp_3084 cell surface protein, ErfK familychromosome CDS2744152 630 + 0.463492
lp_3099 lp_3099 integral membrane proteinchromosome CDS2759717 567 - 0.389771
lp_3127 lp_3127 cell surface protein precursor, GY familychromosome CDS2792958 3570 + 0.506162
lp_3134 lp_3134 unknownchromosome CDS2803412 372 + 0.403226
lp_3136 lp_3136 transport proteinchromosome CDS2805956 1377 - 0.407407
lp_3155 lp_3155 cell surface protein, ErfK familychromosome CDS2819313 660 + 0.45303
lp_3184 lp_3184 integral membrane proteinchromosome CDS2839164 351 - 0.410256
lp_3192 lp_3192 integral membrane proteinchromosome CDS2844902 690 - 0.484058
lp_3195 lp_3195 integral membrane proteinchromosome CDS2848402 726 - 0.488981
lp_3197 lp_3197 unknownchromosome CDS2850280 192 - 0.432292
lp_3215 lp_3215 unknownchromosome CDS2863979 546 - 0.43956
lp_3217 lp_3217 integral membrane protein (putative)chromosome CDS2865200 639 + 0.43975
lp_3218 lp_3218 unknownchromosome CDS2865822 936 + 0.439103
lp_3223 lp_3223 integral membrane proteinchromosome CDS2871746 1086 - 0.450276
lp_3256 lp_3256 DegV family proteinchromosome CDS2898720 840 - 0.492857
lp_3321 lp_3321 unknownchromosome CDS2955481 252 - 0.436508
lp_3323 lp_3323 unknownchromosome CDS2956430 675 - 0.485926
lp_3330 lp_3330 unknownchromosome CDS2962694 669 - 0.426009
lp_3346 lp_3346 unknownchromosome CDS2978192 375 - 0.458667
lp_3359 lp_3359 integral membrane proteinchromosome CDS2985875 699 - 0.476395
lp_3360 lp_3360 integral membrane proteinchromosome CDS2986599 678 - 0.473451
lp_3388 lp_3388 prophage Lp4 protein 3, phage-like repressorchromosome CDS3004648 690 - 0.413043
lp_3404 lp_3404 integral membrane proteinchromosome CDS3018895 753 + 0.499336
lp_3405 lp_3405 integral membrane proteinchromosome CDS3019660 462 + 0.471861
lp_3411 lp_3411 extracellular proteinchromosome CDS3023759 969 + 0.415893
lp_3426 lp_3426 unknownchromosome CDS3040170 312 - 0.448718
lp_3432 lp_3432 unknownchromosome CDS3044289 696 + 0.53592
lp_3438 lp_3438 unknownchromosome CDS3050542 270 + 0.444444
lp_3460 lp_3460 unknownchromosome CDS3064972 1338 - 0.499253
lp_3491 lp_3491 fumarate reductase, flavoprotein subunit precursorchromosome CDS3103417 2292 - 0.435864
lp_3510 lp_3510 unknownchromosome CDS3124306 1089 + 0.449036
lp_3524 lp_3524 unknownchromosome CDS3139241 1056 - 0.433712
lp_3540 lp_3540 transport proteinchromosome CDS3159330 1371 - 0.39752
lp_3552 lp_3552 unknownchromosome CDS3171558 399 - 0.368421
lp_3560 lp_3560 unknownchromosome CDS3180519 408 - 0.404412
lp_3577 lp_3577 integral membrane proteinchromosome CDS3193313 318 - 0.380503
lp_3590 lp_3590 unknownchromosome CDS3208457 411 - 0.374696
lp_3591 lp_3591 sugar specific permease (putative)chromosome CDS3208955 690 - 0.397101
lp_3594 lp_3594 unknownchromosome CDS3211883 315 - 0.396825
lp_3613 lp_3613 unknownchromosome CDS3229295 468 + 0.376068
lp_3632 lp_3632 unknownchromosome CDS3247934 1290 - 0.445736
lp_3640 lp_3640 integral membrane proteinchromosome CDS3258354 660 - 0.386364
lp_3669 lp_3669 DegV family proteinchromosome CDS3289726 867 + 0.465975
malA lp_0178 maltose/maltodextrin ABC transporter subunit (putatie)chromosome CDS154791 831 + 0.404332
mraZ lp_2203 cell division protein MraZ (putative)chromosome CDS1990080 426 - 0.457746
pkn1 lp_1619 serine/threonine protein kinase (putative)chromosome CDS1473319 2025 + 0.464691