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2024-05-03 06:55:50

Gene list

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COG category: Function unknown
Organism: Listeria innocua Clip11262, Clip11262

Number of genes found: 302

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Listeria innocua Clip11262, Clip11262
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
gtcA wall teichoic acid glycosylation protein GtcAchromosome CDS2710971 438 - 0.285388
lemA Listeria epitope LemAchromosome CDS986794 558 + 0.367384
lin0004 chromosome CDS4645 219 + 0.388128
lin0018 chromosome CDS21904 822 - 0.385645
lin0035 chromosome CDS39445 660 + 0.357576
lin0040 chromosome CDS43016 612 + 0.316993
lin0049 chromosome CDS52623 294 + 0.384354
lin0050 chromosome CDS53065 3204 + 0.361423
lin0052 chromosome CDS56788 252 + 0.297619
lin0053 chromosome CDS57061 1197 + 0.345865
lin0069 chromosome CDS74218 639 - 0.375587
lin0080 chromosome CDS81081 774 + 0.368217
lin0119 putative tape-measure [Bacteriophage A118]chromosome CDS102883 5367 + 0.399292
lin0146 chromosome CDS141411 390 + 0.376923
lin0147 chromosome CDS141935 351 + 0.347578
lin0150 chromosome CDS144354 291 + 0.364261
lin0168 chromosome CDS159776 1869 + 0.383093
lin0180 chromosome CDS171737 234 + 0.367521
lin0206 chromosome CDS199381 834 + 0.411271
lin0207 chromosome CDS200225 390 + 0.415385
lin0213 chromosome CDS203929 1260 + 0.380159
lin0225 chromosome CDS222628 1218 + 0.353859
lin0228 chromosome CDS225522 258 + 0.348837
lin0230 chromosome CDS226815 738 + 0.383469
lin0239 chromosome CDS235882 462 + 0.316017
lin0240 chromosome CDS236392 333 - 0.408408
lin0262 chromosome CDS272089 519 + 0.393064
lin0272 chromosome CDS283969 411 + 0.411192
lin0290 internalin like protein (LPXTG motif)chromosome CDS302762 1518 + 0.35112
lin0295 chromosome CDS308467 1086 - 0.338858
lin0317 chromosome CDS331608 1323 + 0.347695
lin0318 chromosome CDS332933 840 + 0.355952
lin0321 chromosome CDS337002 480 + 0.45625
lin0337 chromosome CDS351479 1662 + 0.285199
lin0339 chromosome CDS354060 786 + 0.469466
lin0352 chromosome CDS365172 4050 + 0.37679
lin0354 chromosome CDS370223 1818 - 0.350385
lin0369 chromosome CDS381987 378 - 0.386243
lin0372 probable cell surface protein (LPXTG motif)chromosome CDS383886 1971 + 0.371892
lin0388 chromosome CDS401541 720 + 0.381944
lin0405 chromosome CDS417992 399 + 0.370927
lin0410 chromosome CDS421219 945 + 0.421164
lin0420 chromosome CDS430451 483 + 0.385093
lin0430 chromosome CDS440129 393 + 0.328244
lin0431 chromosome CDS440534 423 + 0.378251
lin0467 chromosome CDS487428 666 - 0.367868
lin0474 chromosome CDS496446 1101 + 0.442325
lin0483 chromosome CDS507631 1701 + 0.405056
lin0485 chromosome CDS510674 480 + 0.414583
lin0497 chromosome CDS520860 225 + 0.32
lin0514 chromosome CDS534129 1836 + 0.372004
lin0518 chromosome CDS539272 369 - 0.441734
lin0532 chromosome CDS557879 1500 + 0.354667
lin0538 chromosome CDS564830 1356 + 0.445428
lin0553 chromosome CDS580648 2106 + 0.359924
lin0558 chromosome CDS586088 1995 + 0.3599
lin0586 chromosome CDS614385 459 - 0.43573
lin0587 putative conserved membrane proteinchromosome CDS614857 753 - 0.387782
lin0588 chromosome CDS615774 210 + 0.390476
lin0598 chromosome CDS629621 417 + 0.381295
lin0599 chromosome CDS630034 1770 + 0.393785
lin0600 chromosome CDS631800 774 + 0.359173
lin0605 chromosome CDS637153 528 + 0.348485
lin0609 chromosome CDS639577 591 + 0.367174
lin0619 chromosome CDS648814 1764 - 0.359977
lin0650 chromosome CDS680807 285 - 0.34386
lin0653 chromosome CDS682845 2691 + 0.369751
lin0656 chromosome CDS686761 1038 - 0.393064
lin0659 chromosome CDS689025 564 - 0.358156
lin0661 internalin like protein (LPXTG motif)chromosome CDS690411 1791 + 0.327192
lin0666 chromosome CDS697208 309 - 0.427184
lin0671 chromosome CDS700293 378 + 0.396825
lin0675 chromosome CDS703643 177 + 0.412429
lin0679 chromosome CDS707870 411 + 0.386861
lin0680 chromosome CDS708424 423 + 0.352246
lin0702 chromosome CDS727887 411 + 0.36983
lin0728 chromosome CDS749594 324 + 0.373457
lin0732 chromosome CDS754586 729 + 0.377229
lin0739 internalin like protein (LPXTG)chromosome CDS760366 1566 + 0.34802
lin0740 probable cell surface protein (LPXTG motif)chromosome CDS761993 1974 - 0.355623
lin0741 putative peptidoglycan bound protein (LPXTG motif)chromosome CDS764492 1890 + 0.372487
lin0759 chromosome CDS781299 1299 + 0.368745
lin0773 chromosome CDS795075 468 - 0.344017
lin0783 chromosome CDS809559 477 - 0.371069
lin0789 chromosome CDS814421 531 - 0.372881
lin0793 chromosome CDS818452 351 + 0.344729
lin0794 chromosome CDS818953 639 + 0.331768
lin0813 chromosome CDS840717 414 - 0.396135
lin0828 chromosome CDS859848 414 - 0.338164
lin0833 chromosome CDS867168 1470 + 0.277551
lin0834 chromosome CDS868621 1110 + 0.283784
lin0836 chromosome CDS870970 258 - 0.403101
lin0860 chromosome CDS896906 489 + 0.345603
lin0863 chromosome CDS899100 312 + 0.365385
lin0881 chromosome CDS915114 483 + 0.380952
lin0882 chromosome CDS915589 1485 + 0.385185
lin0898 chromosome CDS930196 468 + 0.378205
lin0899 chromosome CDS930995 393 + 0.348601
lin0911 chromosome CDS940917 504 + 0.363095
lin0922 chromosome CDS952600 840 + 0.340476
lin0932 chromosome CDS962633 606 - 0.334983
lin0943 chromosome CDS971343 303 + 0.363036
lin0951 chromosome CDS978308 459 + 0.359477
lin0964 chromosome CDS989393 585 - 0.324786
lin0966 chromosome CDS990620 669 + 0.372197
lin1000 chromosome CDS1023943 270 - 0.307407
lin1003 chromosome CDS1026618 1035 + 0.341063
lin1007 chromosome CDS1030462 234 + 0.346154
lin1018 chromosome CDS1039880 873 + 0.387171
lin1019 chromosome CDS1040888 714 + 0.364146
lin1024 chromosome CDS1045031 852 + 0.357981
lin1027 chromosome CDS1048674 210 - 0.366667
lin1029 chromosome CDS1050165 804 - 0.358209
lin1050 chromosome CDS1068248 273 + 0.344322
lin1053 chromosome CDS1070267 615 - 0.378862
lin1057 chromosome CDS1074900 231 - 0.316017
lin1058 chromosome CDS1075336 282 + 0.351064
lin1079 chromosome CDS1104825 309 + 0.355987
lin1093 chromosome CDS1114992 456 + 0.346491
lin1101 chromosome CDS1123071 1554 + 0.387387
lin1102 chromosome CDS1124658 348 - 0.321839
lin1104 chromosome CDS1125770 408 - 0.387255
lin1172 chromosome CDS1183215 567 + 0.395062
lin1173 chromosome CDS1183825 468 - 0.365385
lin1174 chromosome CDS1184307 450 - 0.364444
lin1192 chromosome CDS1205347 264 + 0.378788
lin1204 chromosome CDS1218927 3714 + 0.33818
lin1205 chromosome CDS1222883 1359 + 0.373068
lin1206 chromosome CDS1224283 594 - 0.358586
lin1207 chromosome CDS1224994 408 - 0.360294
lin1213 chromosome CDS1229498 261 - 0.390805
lin1219 chromosome CDS1234873 846 - 0.358156
lin1229 chromosome CDS1244632 1140 - 0.366667
lin1260 chromosome CDS1265438 768 + 0.333333
lin1266 chromosome CDS1269646 837 + 0.360812
lin1283 chromosome CDS1286256 684 + 0.336257
lin1287 chromosome CDS1288604 1086 + 0.364641
lin1295 chromosome CDS1292853 264 + 0.348485
lin1323 chromosome CDS1316566 597 - 0.371859
lin1328 internalin like protein (LPXTG motif)chromosome CDS1323226 1863 + 0.3489
lin1342 chromosome CDS1339052 228 + 0.289474
lin1344 chromosome CDS1341643 240 + 0.341667
lin1358 chromosome CDS1358242 468 + 0.384615
lin1363 chromosome CDS1362816 279 + 0.379928
lin1375 chromosome CDS1373008 213 + 0.29108
lin1395 chromosome CDS1389360 408 + 0.387255
lin1419 chromosome CDS1413242 348 + 0.336207
lin1422 chromosome CDS1415958 927 + 0.37109
lin1432 chromosome CDS1429152 936 + 0.348291
lin1438 chromosome CDS1435866 804 + 0.386816
lin1439 chromosome CDS1436686 363 + 0.355372
lin1468 chromosome CDS1468598 561 - 0.40107
lin1469 chromosome CDS1469406 384 - 0.328125
lin1481 chromosome CDS1483671 327 + 0.336391
lin1489 chromosome CDS1490613 1122 - 0.34492
lin1493 chromosome CDS1495622 441 - 0.369615
lin1494 chromosome CDS1496250 825 - 0.372121
lin1505 chromosome CDS1507426 447 - 0.407159
lin1507 chromosome CDS1508263 768 - 0.389323
lin1521 chromosome CDS1524193 357 - 0.386555
lin1535 chromosome CDS1535192 627 + 0.38756
lin1536 chromosome CDS1535863 303 - 0.343234
lin1538 chromosome CDS1536594 273 - 0.369963
lin1561 chromosome CDS1565992 345 - 0.330435
lin1570 chromosome CDS1574620 726 - 0.396694
lin1603 chromosome CDS1611525 462 - 0.365801
lin1626 chromosome CDS1635718 537 - 0.376164
lin1649 chromosome CDS1661615 801 - 0.385768
lin1653 chromosome CDS1664356 312 + 0.387821
lin1654 chromosome CDS1664704 249 - 0.349398
lin1676 chromosome CDS1688298 429 + 0.361305
lin1702 chromosome CDS1716378 261 - 0.409962
lin1710 chromosome CDS1719665 1152 - 0.364583
lin1726 chromosome CDS1732170 906 - 0.405077
lin1728 chromosome CDS1733545 1110 - 0.372072
lin1730 chromosome CDS1734870 1410 - 0.361702
lin1731 chromosome CDS1736272 1386 - 0.373737
lin1733 chromosome CDS1739109 885 - 0.413559
lin1738 chromosome CDS1743052 768 - 0.334635
lin1778 chromosome CDS1774791 267 + 0.389513
lin1794 chromosome CDS1801893 1089 + 0.343434
lin1803 chromosome CDS1809298 2598 - 0.372209
lin1818 chromosome CDS1823625 870 - 0.362069
lin1819 chromosome CDS1824585 222 + 0.31982
lin1828 chromosome CDS1832886 1068 - 0.286517
lin1829 chromosome CDS1834185 1086 - 0.388582
lin1862 chromosome CDS1873727 555 - 0.390991
lin1875 chromosome CDS1889286 297 - 0.356902
lin1888 chromosome CDS1902664 525 - 0.32381
lin1893 chromosome CDS1911753 531 - 0.352166
lin1916 chromosome CDS1929514 333 - 0.303303
lin1929 chromosome CDS1944687 366 - 0.352459
lin1934 chromosome CDS1947899 1974 - 0.373354
lin1942 chromosome CDS1957525 876 - 0.377854
lin1968 chromosome CDS1985423 294 - 0.397959
lin1971 chromosome CDS1987437 234 - 0.350427
lin1975 chromosome CDS1989736 615 - 0.330081
lin1977 chromosome CDS1991166 840 - 0.380952
lin1980 chromosome CDS1993582 813 + 0.392374
lin1983 chromosome CDS1997478 984 - 0.38313
lin1984 chromosome CDS1998555 624 - 0.379808
lin2003 chromosome CDS2017116 546 - 0.355311
lin2012 chromosome CDS2025959 522 - 0.346743
lin2023 chromosome CDS2036188 867 + 0.391003
lin2034 chromosome CDS2049901 597 - 0.363484
lin2035 chromosome CDS2050585 546 - 0.377289
lin2057 chromosome CDS2072644 1008 - 0.34623
lin2059 chromosome CDS2074073 612 - 0.348039
lin2065 chromosome CDS2079779 750 - 0.348
lin2086 chromosome CDS2101286 432 + 0.363426
lin2120 chromosome CDS2138333 612 - 0.348039
lin2121 chromosome CDS2139004 1305 - 0.395402
lin2134 chromosome CDS2158281 777 - 0.392535
lin2135 chromosome CDS2159184 291 - 0.329897
lin2136 chromosome CDS2159497 459 - 0.368192
lin2148 chromosome CDS2173335 432 - 0.375
lin2160 chromosome CDS2185183 282 - 0.336879
lin2161 chromosome CDS2185495 450 - 0.406667
lin2162 chromosome CDS2185992 1056 - 0.350379
lin2166 chromosome CDS2190112 642 - 0.370717
lin2167 chromosome CDS2190772 618 - 0.406149
lin2189 chromosome CDS2207105 627 - 0.446571
lin2218 chromosome CDS2237464 756 + 0.395503
lin2224 chromosome CDS2244133 1359 - 0.376012
lin2225 chromosome CDS2245491 822 - 0.36983
lin2227 chromosome CDS2248764 834 - 0.381295
lin2251 chromosome CDS2274218 1008 + 0.393849
lin2252 chromosome CDS2275281 642 + 0.345794
lin2260 chromosome CDS2281803 342 + 0.309942
lin2261 chromosome CDS2282302 186 - 0.370968
lin2285 chromosome CDS2314890 741 - 0.349528
lin2324 chromosome CDS2354726 2727 - 0.343601
lin2326 chromosome CDS2358828 354 - 0.350282
lin2327 chromosome CDS2359263 1134 - 0.361552
lin2365 chromosome CDS2396393 903 - 0.328904
lin2375 chromosome CDS2409591 282 - 0.390071
lin2395 chromosome CDS2427980 741 - 0.387314
lin2418 chromosome CDS2439816 771 - 0.386511
lin2433 chromosome CDS2451961 444 - 0.378378
lin2451 chromosome CDS2469236 531 - 0.348399
lin2456 chromosome CDS2474783 747 - 0.350736
lin2460 transmembrane proteinchromosome CDS2477688 2784 - 0.387213
lin2485 chromosome CDS2510748 474 + 0.400844
lin2486 chromosome CDS2511255 819 - 0.387057
lin2487 chromosome CDS2512108 822 - 0.360097
lin2491 chromosome CDS2516433 234 - 0.410256
lin2492 chromosome CDS2516688 327 - 0.412844
lin2501 chromosome CDS2524562 276 - 0.351449
lin2504 chromosome CDS2527198 366 + 0.401639
lin2505 chromosome CDS2527595 846 - 0.388889
lin2529 chromosome CDS2550999 309 + 0.330097
lin2532 chromosome CDS2552922 513 - 0.403509
lin2533 chromosome CDS2553557 342 + 0.309942
lin2534 chromosome CDS2553931 384 - 0.346354
lin2536 chromosome CDS2555306 570 - 0.387719
lin2537 chromosome CDS2556522 1053 - 0.322887
lin2539 chromosome CDS2561574 945 - 0.341799
lin2560 chromosome CDS2587044 336 + 0.342262
lin2566 chromosome CDS2592600 2142 - 0.370215
lin2567 chromosome CDS2594723 741 - 0.323887
lin2568 chromosome CDS2595460 3282 - 0.373248
lin2578 chromosome CDS2603146 1182 - 0.357868
lin2582 chromosome CDS2607196 744 - 0.341398
lin2611 chromosome CDS2626101 1437 - 0.38135
lin2615 chromosome CDS2631015 972 - 0.380658
lin2616 chromosome CDS2631994 969 - 0.380805
lin2627 chromosome CDS2643743 354 - 0.327684
lin2629 chromosome CDS2644329 1212 - 0.391914
lin2630 chromosome CDS2645608 1251 - 0.353317
lin2633 chromosome CDS2652169 240 - 0.4125
lin2652 chromosome CDS2669712 864 - 0.369213
lin2658 chromosome CDS2677431 852 - 0.375587
lin2660 chromosome CDS2679373 636 + 0.361635
lin2671 chromosome CDS2689773 237 - 0.291139
lin2698 chromosome CDS2715208 1074 - 0.36406
lin2707 chromosome CDS2728064 450 - 0.393333
lin2715 chromosome CDS2734544 615 - 0.341463
lin2723 chromosome CDS2740630 285 + 0.368421
lin2730 chromosome CDS2749082 477 - 0.375262
lin2732 chromosome CDS2753045 843 + 0.398576
lin2744 chromosome CDS2770707 4005 - 0.338826
lin2751 chromosome CDS2779560 663 + 0.390649
lin2786 chromosome CDS2800467 900 - 0.367778
lin2788 chromosome CDS2803875 435 + 0.381609
lin2789 chromosome CDS2804342 543 + 0.412523
lin2798 chromosome CDS2812509 1299 - 0.411855
lin2818 chromosome CDS2834275 813 - 0.357934
lin2819 chromosome CDS2835161 363 - 0.404959
lin2840 chromosome CDS2859005 330 - 0.418182
lin2845 chromosome CDS2863295 375 + 0.376
lin2851 chromosome CDS2867559 318 - 0.371069
lin2861 secreted protein with 1 GW repeatchromosome CDS2875899 939 - 0.367412
lin2872 chromosome CDS2888589 444 - 0.414414
lin2877 chromosome CDS2892479 405 + 0.404938
lin2910 chromosome CDS2928694 675 - 0.368889
lin2915 chromosome CDS2934802 2169 - 0.310281
lin2921 chromosome CDS2943055 198 - 0.348485
lin2955 chromosome CDS2976711 1242 - 0.4219
lin2978 chromosome CDS3001434 315 - 0.339683
lin2984 chromosome CDS3007762 462 - 0.38961
lmaA antigen Achromosome CDS158481 513 + 0.403509
ltrA low temperature requirement protein Achromosome CDS418848 1116 - 0.355735