TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-16 11:40:15

Gene list

Applied filters:

COG category: General function prediction only
Genomic element: megaplasmid

Number of genes found: 49

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPOA0421 pyridoxamine 5'-phosphate oxidase family proteinmegaplasmid CDS467615 621 - 0.663446
NA SPOA0124 conserved domain proteinmegaplasmid CDS132272 2961 + 0.613644
NA SPOA0034 CBS domain proteinmegaplasmid CDS30859 525 - 0.641905
NA SPOA0349 membrane protein, putativemegaplasmid CDS391276 960 - 0.678125
NA SPOA0148 membrane protein, major facilitator transporter familymegaplasmid CDS159056 1158 - 0.684801
NA SPOA0378 mandelate racemase/muconate lactonizing enzyme family proteinmegaplasmid CDS423926 1104 - 0.657609
NA SPOA0127 cyclase family proteinmegaplasmid CDS137121 792 - 0.603535
NA SPOA0355 conserved hypothetical proteinmegaplasmid CDS396943 945 + 0.677249
NA SPOA0009 hemolysin, putativemegaplasmid CDS6939 888 + 0.628378
NA SPOA0132 aromatic 1,2-dioxygenase, alpha subunitmegaplasmid CDS142410 1341 - 0.586875
NA SPOA0245 galactonate dehydratase, putativemegaplasmid CDS269349 1176 - 0.580782
NA SPOA0114 nitrilase family proteinmegaplasmid CDS118859 1035 + 0.61256
NA SPOA0153 hypothetical proteinmegaplasmid CDS164552 1077 + 0.659239
NA SPOA0109 conserved hypothetical proteinmegaplasmid CDS111593 447 - 0.53915
NA SPOA0108 membrane protein, putativemegaplasmid CDS108335 1215 + 0.606584
NA SPOA0128 oxidoreductase, short chain dehydrogenase/reductase familymegaplasmid CDS137909 1239 - 0.650525
NA SPOA0277 hydrolase, alpha/beta fold familymegaplasmid CDS305059 759 - 0.698287
NA SPOA0436 hydrolase, alpha/beta fold familymegaplasmid CDS483730 828 - 0.65942
NA SPOA0075 conserved hypothetical proteinmegaplasmid CDS72135 594 + 0.646465
NA SPOA0192 conserved hypothetical proteinmegaplasmid CDS203945 420 - 0.592857
NA SPOA0074 conserved hypothetical proteinmegaplasmid CDS71744 399 + 0.593985
NA SPOA0183 SCO1/SenC family proteinmegaplasmid CDS196299 600 - 0.631667
NA SPOA0126 oxidoreductase, short chain dehydrogenase/reductase familymegaplasmid CDS136399 726 - 0.607438
NA SPOA0167 TRAP transporter, 4TM/12TM fusion proteinmegaplasmid CDS184036 2214 + 0.618789
NA SPOA0008 conserved hypothetical protein TIGR00043megaplasmid CDS6408 498 + 0.62249
NA SPOA0340 tautomerase, putativemegaplasmid CDS383776 234 - 0.611111
NA SPOA0428 mandelate racemase/muconate lactonizing enzyme family proteinmegaplasmid CDS474485 1227 - 0.647922
NA SPOA0076 hydrolase, carbon-nitrogen familymegaplasmid CDS72753 897 + 0.64214
NA SPOA0376 epoxide hydrolase domain proteinmegaplasmid CDS421021 1311 + 0.621663
NA SPOA0406 D-beta-hydroxybutyrate dehydrogenase, putativemegaplasmid CDS451660 759 - 0.675889
NA SPOA0316 amidohydrolase domain proteinmegaplasmid CDS353871 1656 - 0.640097
NA SPOA0210 integral membrane proteinmegaplasmid CDS231416 840 - 0.671429
NA SPOA0433 esterase EstC, putativemegaplasmid CDS481134 714 - 0.652661
NA SPOA0195 conserved domain proteinmegaplasmid CDS206169 951 - 0.635121
NA SPOA0270 conserved hypothetical proteinmegaplasmid CDS296672 711 + 0.64557
NA SPOA0248 conserved hypothetical proteinmegaplasmid CDS272618 426 - 0.622066
NA SPOA0431 tetracycline resistance proteinmegaplasmid CDS478537 1200 - 0.655
NA SPOA0419 phenazine biosynthesis protein, PhzF familymegaplasmid CDS466454 837 - 0.670251
NA SPOA0286 ThiJ/PfpI family proteinmegaplasmid CDS314883 606 - 0.681518
NA SPOA0325 oxidoreductase, 2-nitropropane dioxygenase familymegaplasmid CDS363781 1077 - 0.709378
NA SPOA0166 TRAP transporter solute receptor, TAXI familymegaplasmid CDS182941 1011 + 0.620178
catD SPOA0434 3-oxoadipate enol-lactone hydrolasemegaplasmid CDS481860 789 - 0.665399
dehII SPOA0437 haloacid dehalogenase, type IImegaplasmid CDS484558 687 - 0.682678
nirJ SPOA0227 nitrite reductase heme biosynthesis J proteinmegaplasmid CDS248115 1212 + 0.656766
nirN SPOA0228 nitrite reductase protein Nmegaplasmid CDS249427 1512 + 0.653439
norQ SPOA0215 nitric oxide reductase Q proteinmegaplasmid CDS236898 816 - 0.64951
nosY SPOA0053 nitrous oxide maturation protein NosYmegaplasmid CDS49138 822 + 0.687348
pmtA SPOA0294 phosphatidylethanolamine N-methyltransferasemegaplasmid CDS323640 621 + 0.565217
trmB SPOA0014 tRNA (guanine-N(7)-)-methyltransferasemegaplasmid CDS12070 714 + 0.663866