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2024-05-19 07:53:22

Gene list

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COG category: General function prediction only
Genomic element: chromosome

Number of genes found: 233

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus acidophilus NCFM, NCFM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBA0162 hypothetical proteinchromosome CDS155835 564 + 0.356383
NA LBA1692 putative acetyltransferasechromosome CDS1713982 564 - 0.338652
NA LBA0728 hypothetical proteinchromosome CDS717754 948 + 0.351266
NA LBA1202 hypothetical proteinchromosome CDS1178998 525 - 0.346667
NA LBA0717 hydrolase of the HAD familychromosome CDS708814 816 + 0.335784
NA LBA0253 putative multidrug resistance proteinchromosome CDS247165 261 + 0.37931
NA LBA1393 acetyltransferasechromosome CDS1385483 513 - 0.348928
NA LBA0385 tetrapyrrole methylase family proteinchromosome CDS358269 855 + 0.347368
NA LBA0270 hypothetical proteinchromosome CDS260916 708 - 0.347458
NA LBA0230 hypothetical proteinchromosome CDS226860 1365 - 0.355311
NA LBA1110 hypothetical proteinchromosome CDS1088791 555 + 0.320721
NA LBA1429 putative transporter-membrane proteinchromosome CDS1415546 1179 - 0.35369
NA LBA0398 putative DNA binding proteinchromosome CDS371965 636 + 0.325472
NA LBA1531 GTP-binding proteinchromosome CDS1524489 1110 - 0.35045
NA LBA0082 hypothetical proteinchromosome CDS84727 798 + 0.378446
NA LBA1937 hypothetical proteinchromosome CDS1948294 654 - 0.353211
NA LBA1947 aldehyde reductasechromosome CDS1959408 828 - 0.347826
NA LBA0633 hypothetical proteinchromosome CDS619054 813 + 0.328413
NA LBA1060 hypothetical proteinchromosome CDS1043220 483 + 0.283644
NA LBA0601 serine proteasechromosome CDS587716 849 + 0.363958
NA LBA0530 putative protein involved in sex pheromone biosynthesischromosome CDS519649 1149 + 0.353351
NA LBA1765 hypothetical proteinchromosome CDS1796197 282 + 0.351064
NA LBA0656 putative permeasechromosome CDS641806 1188 + 0.332492
NA LBA0242 hypothetical proteinchromosome CDS237782 771 - 0.380026
NA LBA1506 putative membrane proteinchromosome CDS1495890 681 - 0.377386
NA LBA0263 hypothetical proteinchromosome CDS253371 849 - 0.353357
NA LBA1037 aldose reductasechromosome CDS1026952 867 + 0.350634
NA LBA1858 hypothetical proteinchromosome CDS1867406 507 - 0.382643
NA LBA1586 histidine triad HIT family proteinchromosome CDS1578929 432 + 0.351852
NA LBA0824 hypothetical proteinchromosome CDS805380 645 + 0.306977
NA LBA0092 prolyl aminopeptidasechromosome CDS91987 882 - 0.390023
NA LBA1753 hypothetical proteinchromosome CDS1787860 318 - 0.345912
NA LBA0159 hypothetical proteinchromosome CDS151439 1269 + 0.35461
NA LBA0942 glyoxylate reductasechromosome CDS916693 966 + 0.329193
NA LBA0566 multidrug transporterchromosome CDS550975 1416 + 0.385593
NA LBA0565 putative hydrolase of the HAD familychromosome CDS550482 312 - 0.330128
NA LBA0164 multidrug resistance proteinchromosome CDS157716 1218 + 0.357964
NA LBA1676 probable ATP-dependent helicasechromosome CDS1695812 2064 - 0.343992
NA LBA0947 GTP binding proteinchromosome CDS921807 1302 + 0.380952
NA LBA1117 putative pyrroline reductasechromosome CDS1093726 288 - 0.322917
NA LBA0839 competence proteinchromosome CDS820453 2289 + 0.305374
NA LBA0039 hypothetical proteinchromosome CDS34699 525 - 0.318095
NA LBA1696 aspartate alanine antiporterchromosome CDS1717403 1659 + 0.331525
NA LBA0990 putative hydrolasechromosome CDS964125 855 + 0.307602
NA LBA0802 hypothetical proteinchromosome CDS784298 330 + 0.263636
NA LBA0635 transporter protein-putative hemolysinchromosome CDS620921 864 + 0.33912
NA LBA1310 dihydroacetone kinasechromosome CDS1291113 1662 - 0.366426
NA LBA1217 acetyltransferasechromosome CDS1194086 615 + 0.37561
NA LBA1658 prolyl aminopeptidasechromosome CDS1681853 918 + 0.379085
NA LBA0470 ATP-dependent helicasechromosome CDS458523 2232 + 0.382168
NA LBA1040 putative hydrolasechromosome CDS1029790 144 + 0.333333
NA LBA0661 proteasechromosome CDS647657 1254 + 0.304625
NA LBA1951 hypothetical proteinchromosome CDS1962671 801 - 0.347066
NA LBA0045 sugar transporterchromosome CDS40163 1353 + 0.351072
NA LBA0969 phosphoglycerate dehydrogenasechromosome CDS943263 1308 + 0.370795
NA LBA0108 predicted hydrolasechromosome CDS104860 648 + 0.320988
NA LBA1887 predicted permeasechromosome CDS1898549 903 - 0.3732
NA LBA0196 putative hydrolasechromosome CDS190465 654 + 0.356269
NA LBA1084 putative NADH-flavin reductasechromosome CDS1064208 645 + 0.36124
NA LBA1527 hypothetical proteinchromosome CDS1521722 1152 - 0.350694
NA LBA0556 putative acetyltransferasechromosome CDS544628 438 + 0.356164
NA LBA0031 hypothetical proteinchromosome CDS27643 402 + 0.293532
NA LBA0568 malate permeasechromosome CDS553719 939 + 0.337593
NA LBA0827 putative transcriptional regulatorchromosome CDS810151 948 - 0.310127
NA LBA0853 amino acid amidohydrolasechromosome CDS836997 1152 + 0.332465
NA LBA1884 predicted permeasechromosome CDS1896640 921 - 0.368078
NA LBA0476 hypothetical proteinchromosome CDS468352 1749 + 0.280732
NA LBA1192 putative methyltransferasechromosome CDS1169080 687 - 0.331878
NA LBA1944 sugar ABC transporter ATP binding proteinchromosome CDS1955662 1539 + 0.354126
NA LBA1621 multidrug transporterchromosome CDS1623774 1458 - 0.341564
NA LBA1960 hypothetical proteinchromosome CDS1972892 573 + 0.408377
NA LBA0342 2',3'-cyclic nucleotidechromosome CDS323227 936 + 0.344017
NA LBA1675 hypothetical proteinchromosome CDS1695570 207 - 0.352657
NA LBA1952 putative xanthine-uracil permeaseschromosome CDS1963696 1308 + 0.396024
NA LBA1959 transporter proteinchromosome CDS1972153 777 + 0.3861
NA LBA0950 oxidoreductase, short chaindehydrogenase-reductasechromosome CDS926003 795 + 0.353459
NA LBA1903 glutamine amidotransferasechromosome CDS1911881 729 - 0.371742
NA LBA1427 predicted oxidoreductasechromosome CDS1414417 693 - 0.329004
NA LBA1582 methlytransferasechromosome CDS1576228 657 - 0.334855
NA LBA0367 putative receptorchromosome CDS346044 1182 + 0.35956
NA LBA0844 hypothetical proteinchromosome CDS826418 834 + 0.309353
NA LBA1731 glycosyltransferasechromosome CDS1765530 882 - 0.289116
NA LBA1917 polysaccharide transporterchromosome CDS1927389 1617 - 0.346939
NA LBA1030 streptothricine-acetyl-transferasechromosome CDS1021538 534 + 0.344569
NA LBA0182 oxidoreductasechromosome CDS175712 966 - 0.341615
NA LBA1027 oxidoreductasechromosome CDS1019045 858 + 0.377622
NA LBA1471 putative multidrug efflux permeasechromosome CDS1455574 1224 - 0.321895
NA LBA0392 putative dehydrogenasechromosome CDS363654 972 + 0.322016
NA LBA1830 hypothetical proteinchromosome CDS1844556 537 + 0.331471
NA LBA0718 hydrolase of HAD familychromosome CDS709663 786 + 0.330789
NA LBA0570 ABC transporter ATP-binding proteinchromosome CDS555870 1626 + 0.373924
NA LBA1885 predicted permeasechromosome CDS1897541 930 - 0.368817
NA LBA0753 multi-drug-type permeasechromosome CDS740476 1389 + 0.327574
NA LBA0913 putative hydrolase or acyltransferasechromosome CDS891647 792 + 0.330808
NA LBA0389 ribosomal protein ala-acetyltransferasechromosome CDS361175 573 + 0.293194
NA LBA0819 putative ADP-ribose pyrophosphatasechromosome CDS801415 570 + 0.354386
NA LBA0120 hypothetical proteinchromosome CDS115439 927 - 0.325782
NA LBA1769 hypothetical proteinchromosome CDS1798730 366 + 0.382514
NA LBA1017 putative mucus binding proteinchromosome CDS995551 885 + 0.320904
NA LBA0415 hypothetical proteinchromosome CDS390795 957 + 0.3814
NA LBA0333 hypothetical proteinchromosome CDS317178 372 + 0.290323
NA LBA0338 putative integral membrane proteinchromosome CDS319813 759 + 0.338603
NA LBA1834 putative oxidoreductasechromosome CDS1847496 540 - 0.368519
NA LBA0974 hemolysin IIIchromosome CDS948587 666 - 0.334835
NA LBA0337 hypothetical proteinchromosome CDS319080 660 - 0.310606
NA LBA1175 putative dehydrogenasechromosome CDS1156800 576 + 0.336806
NA LBA1704 putative glucokinasechromosome CDS1728874 897 - 0.382386
NA LBA1201 GTP-binding proteinchromosome CDS1178091 906 - 0.342163
NA LBA1114 alcohol dehydrogenasechromosome CDS1090777 450 + 0.404444
NA LBA1671 putative acetyltransferasechromosome CDS1692580 453 - 0.368653
NA LBA0124 putative oxidoreductasechromosome CDS119208 657 + 0.386606
NA LBA0534 transcriptional regulatorchromosome CDS524017 921 + 0.371336
NA LBA0459 maltose O-acetyltransferasechromosome CDS443767 453 + 0.335541
NA LBA0551 putative acetyltransferasechromosome CDS538341 501 + 0.351297
NA LBA1061 putative phosphate transporter related proteinchromosome CDS1044028 597 + 0.313233
NA LBA1359 hypothetical proteinchromosome CDS1333152 816 - 0.345588
NA LBA1786 hypothetical proteinchromosome CDS1810966 423 - 0.373522
NA LBA0595 hypothetical proteinchromosome CDS580506 819 - 0.37851
NA LBA0878 hypothetical proteinchromosome CDS856155 507 + 0.252465
NA LBA0796 putative hydrolasechromosome CDS780160 678 + 0.367257
NA LBA1499 ABC transporterchromosome CDS1490048 657 + 0.287671
NA LBA0049 putative ABC transporter substrate binding proteinchromosome CDS43853 993 - 0.383686
NA LBA1698 putative prophage related proteinchromosome CDS1720222 1065 - 0.338028
NA LBA0047 ABC transporter ATP-binding proteinchromosome CDS42202 762 - 0.338583
NA LBA1911 putative cell surface hydrolasechromosome CDS1921539 912 - 0.317982
NA LBA0336 4-methyl-5(b-hydroxyethyl)-thiazolemonophosphate biosynthesischromosome CDS318450 585 - 0.403419
NA LBA0671 competence proteinchromosome CDS657716 696 + 0.304598
NA LBA1833 putative oxidoreductasechromosome CDS1846936 549 - 0.336976
NA LBA0949 putative metallo-beta-lactamase superfamilychromosome CDS925068 939 + 0.347178
NA LBA0848 GTP-binding protein ENGB familychromosome CDS831484 591 + 0.307953
NA LBA0121 putative ribonuclease Hchromosome CDS116459 747 + 0.337349
NA LBA1956 putative xanthine-uracil permeases family proteinchromosome CDS1967577 1257 + 0.404932
NA LBA0535 putative permeasechromosome CDS525008 246 - 0.337398
NA LBA0941 cof family proteinchromosome CDS915814 813 + 0.318573
NA LBA0087 putative proteasechromosome CDS89158 1458 + 0.327161
NA LBA0978 GTP binding proteinchromosome CDS952136 855 + 0.326316
NA LBA0612 transport proteinchromosome CDS598464 1353 + 0.329638
NA LBA1241 hypothetical proteinchromosome CDS1217335 447 - 0.319911
NA LBA1135 putative macrolide efflux proteinchromosome CDS1112209 1218 + 0.320197
NA LBA1026 oxidoreductase aldo-keto reductase familychromosome CDS1017925 870 + 0.387356
NA LBA0630 hypothetical proteinchromosome CDS616205 918 + 0.323529
NA LBA0828 metallo-b-lactamase superfamily proteinchromosome CDS811151 1680 - 0.360119
NA LBA0050 putative hydrolasechromosome CDS45194 714 + 0.340336
NA LBA0043 putative permeasechromosome CDS38124 1041 + 0.332373
NA LBA1316 hypothetical proteinchromosome CDS1295321 891 - 0.354658
NA LBA0558 aldehyde reductasechromosome CDS545268 837 + 0.431302
NA LBA0428 tropomyosin-related proteinchromosome CDS403294 426 + 0.36385
NA LBA0052 putative hydrolasechromosome CDS48016 819 + 0.323565
NA LBA1842 hydrolase of alpha-beta familychromosome CDS1853841 744 + 0.384409
NA LBA1759 ABC transporter ATPase proteinchromosome CDS1790257 1542 - 0.377432
NA LBA1399 hypothetical proteinchromosome CDS1389705 315 + 0.35873
NA LBA1425 hypothetical proteinchromosome CDS1412522 696 - 0.369253
NA LBA0536 putative membrane proteinchromosome CDS525243 567 - 0.345679
NA LBA0940 reductase-dehydrogenasechromosome CDS914947 816 + 0.307598
NA LBA0971 putative O-linked transferasechromosome CDS945097 1248 + 0.324519
NA LBA0048 ABC transporter membrane spanning permeasechromosome CDS42960 897 - 0.360089
NA LBA1783 ABC transporter ATP-binding proteinchromosome CDS1809524 897 - 0.364549
NA LBA0251 multidrug resistance proteinchromosome CDS246043 561 + 0.392157
NA LBA1790 hypothetical proteinchromosome CDS1812517 183 - 0.360656
NA LBA1664 acetyltransferasechromosome CDS1686686 516 + 0.321705
NA LBA0691 hypothetical proteinchromosome CDS684447 882 + 0.333333
NA LBA1057 HIT-like proteinchromosome CDS1041831 468 + 0.294872
NA LBA0213 met-tRNA synthetasechromosome CDS209479 1977 + 0.367223
NA LBA1712 hypothetical proteinchromosome CDS1744727 945 - 0.402116
NA LBA1928 putative CBS domain containing proteinchromosome CDS1939802 477 + 0.310273
NA LBA0660 putative proteasechromosome CDS646446 1215 + 0.302881
NA LBA0705 putative ATPase or kinasechromosome CDS699570 480 + 0.3625
NA LBA1158 penicillin binding protein related factor Achromosome CDS1134701 636 + 0.330189
NA LBA1526 hypothetical proteinchromosome CDS1521172 549 - 0.315118
NA LBA1906 hypothetical proteinchromosome CDS1915708 867 - 0.310265
NA LBA1176 putative dehydrogenasechromosome CDS1157432 348 + 0.364943
NA LBA0066 putative steroid binding proteinchromosome CDS67978 231 - 0.359307
NA LBA1049 putative 4-oxalomesaconate hydratasechromosome CDS1034784 915 + 0.356284
NA LBA0397 ABC transporterchromosome CDS369862 1920 - 0.342708
NA LBA1532 hypothetical proteinchromosome CDS1525591 525 - 0.335238
NA LBA0404 hypothetical proteinchromosome CDS378472 759 + 0.320158
NA LBA1810 hypothetical proteinchromosome CDS1824509 1197 - 0.345865
NA LBA1500 putative ABC transport proteinchromosome CDS1490685 765 + 0.356863
NA LBA0252 multidrug resistance proteinchromosome CDS246763 354 + 0.350282
NA LBA1945 sugar ABC transporter permease proteinchromosome CDS1957193 1152 + 0.378472
NA LBA1062 putative multidrug efflux permeasechromosome CDS1044707 522 + 0.254789
NA LBA1809 hypothetical proteinchromosome CDS1823731 792 - 0.333333
NA LBA1231 hypothetical proteinchromosome CDS1205485 1167 - 0.317052
NA LBA1616 putative polysaccharide transporterchromosome CDS1616850 1647 - 0.360656
NA LBA1350 putative alpha-beta superfamily hydrolasechromosome CDS1324239 900 - 0.317778
NA LBA1589 CMP-binding factorchromosome CDS1580797 978 - 0.365031
NA LBA1942 hypothetical proteinchromosome CDS1953236 1062 + 0.324859
NA LBA1053 membrane proteinchromosome CDS1038262 1194 - 0.378559
NA LBA1946 sugar ABC transporter permease proteinchromosome CDS1958345 957 + 0.374086
NA LBA1250 ABC transporter ATP binding proteinchromosome CDS1228561 1512 - 0.311508
NA LBA0552 multidrug transporterchromosome CDS539332 1467 + 0.365371
NA LBA1068 putative HAD superfamily hydrolasechromosome CDS1048683 603 + 0.363184
NA LBA0249 putative acetyltransferasechromosome CDS244511 504 + 0.365079
NA LBA1098 glucose 1-dehydrogenasechromosome CDS1080288 789 + 0.404309
NA LBA1271 hypothetical proteinchromosome CDS1249966 1032 - 0.352713
NA LBA1853 multidrug resistance efflux pumpchromosome CDS1864533 570 + 0.391228
NA LBA1025 oxidoreductase aldo-keto reductase familychromosome CDS1017044 861 + 0.364692
NA LBA1642 hypothetical proteinchromosome CDS1662223 1296 - 0.39429
NA LBA0702 HAD superfamily hydrolasechromosome CDS696928 876 - 0.335616
NA LBA0843 hypothetical proteinchromosome CDS824658 1758 + 0.358931
NA LBA1401 Peroxidase (Npx)chromosome CDS1392348 1365 - 0.375092
NA LBA1446 multidrug resistance proteinchromosome CDS1432036 1473 + 0.39036
NA LBA1005 putative acetyltransferasechromosome CDS983004 390 + 0.25641
NA LBA1808 hypothetical proteinchromosome CDS1823178 594 - 0.343434
NA LBA1854 multidrug resistance efflux pumpchromosome CDS1865102 675 + 0.38963
NA LBA0567 multidrug resistance efflux pumpchromosome CDS552413 1206 - 0.378939
NA LBA0605 putative hydrolasechromosome CDS592206 810 - 0.349383
NA LBA1943 putative lipoprotein A-antigen precursorchromosome CDS1954510 1086 + 0.381215
NA LBA0757 DNA primasechromosome CDS745466 1503 - 0.309381
NA LBA0564 putative hydrolase of the HAD familychromosome CDS550003 423 - 0.385343
cobQ LBA1882 cobyric acid synthasechromosome CDS1895246 687 + 0.387191
coiA LBA0643 competence proteinchromosome CDS630124 864 + 0.278935
cpdA LBA1154 putative 3',5'-cyclic-nucleotide phosphodiesterasechromosome CDS1130736 1233 - 0.3309
epsI LBA1724 oligosaccharide repeat unit transporterchromosome CDS1759466 1434 - 0.307531
epsU LBA0525 capsular polysaccharide synthesis proteinchromosome CDS511786 1431 + 0.336129
fabG LBA0662 3-oxoacyl-(acyl-carrier protein) reductasechromosome CDS648915 729 + 0.360768
hflX LBA1738 GTP-binding proteinchromosome CDS1771642 1266 + 0.441548
ldhD LBA0055 D-lactate dehydrogenasechromosome CDS50079 1050 - 0.41619
lmrB LBA1494 lincomycin-resistance proteinchromosome CDS1482356 1410 - 0.370213
mutT LBA1193 putative mutator proteinchromosome CDS1169865 441 + 0.319728
mutT LBA0465 putative nudix family proteinchromosome CDS453002 411 + 0.343066
mutT LBA0441 putative mutator proteinchromosome CDS420438 423 + 0.364066
pepL LBA1957 prolyl aminopeptidasechromosome CDS1969369 900 + 0.35
pepX LBA1373 X-Pro dipeptidyl-peptidasechromosome CDS1347556 2382 + 0.405122
pfoR LBA0510 putative regulatory proteinchromosome CDS497648 1044 + 0.37931
pgmB LBA1869 beta-phosphoglucomutasechromosome CDS1878653 666 - 0.357357
pheS LBA1518 phenylalanyl-tRNA synthetase, beta subunitchromosome CDS1512323 2415 - 0.367702
pheT LBA1580 phenylalanyl-tRNA synthetase (beta subunit)chromosome CDS1575175 648 - 0.378086
plcR LBA1630 putative regulatorchromosome CDS1638556 858 + 0.322844
plnI LBA0553 Conserved membrane proteinchromosome CDS540839 759 - 0.335968
thdF LBA1976 thiophene and furan oxidation proteinchromosome CDS1990184 1386 - 0.365801
xlyH LBA1342 putative 4-oxalocrotonate tautomerase 4-OTchromosome CDS1318213 180 - 0.405556
ymdA LBA0667 HD superfamily hydrolasechromosome CDS652804 1632 + 0.371324