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2024-05-14 23:56:27

Gene list

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COG category: General function prediction only
Genomic element: chromosome 2

Number of genes found: 204

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VPA0028 antibiotic acetyltransferasechromosome 2 CDS24466 639 + 0.461659
VPA0042 hypothetical proteinchromosome 2 CDS34981 696 - 0.468391
VPA0054 hypothetical proteinchromosome 2 CDS44787 858 + 0.496504
VPA0064 hypothetical proteinchromosome 2 CDS55835 867 - 0.487889
VPA0066 hypothetical proteinchromosome 2 CDS57811 804 + 0.477612
VPA0070 putative esterasechromosome 2 CDS61135 840 - 0.470238
VPA0077 2-deoxy-D-gluconate 3-dehydrogenasechromosome 2 CDS68938 762 + 0.493438
VPA0084 putative transporter proteinchromosome 2 CDS74083 1740 - 0.499425
VPA0087 putative transporterchromosome 2 CDS79174 1773 + 0.488438
VPA0098 putative efflux pump proteinchromosome 2 CDS89885 1491 + 0.488263
VPA0100 conserved hypothetical proteinchromosome 2 CDS91898 1137 + 0.474055
VPA0103 hypothetical proteinchromosome 2 CDS97197 513 - 0.532164
VPA0110 putative phosphatasechromosome 2 CDS102817 711 - 0.485232
VPA0119 hypothetical proteinchromosome 2 CDS112525 900 + 0.477778
VPA0122 hypothetical proteinchromosome 2 CDS114561 528 - 0.492424
VPA0123 putative hydrolasechromosome 2 CDS115118 495 - 0.462626
VPA0124 putative acetyltransferasechromosome 2 CDS115735 471 - 0.458599
VPA0125 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 2 CDS116207 732 - 0.515027
VPA0138 putative TldD proteinchromosome 2 CDS128334 1386 + 0.489177
VPA0139 putative PmbA-related proteinchromosome 2 CDS129719 1344 + 0.46875
VPA0141 putative Mdrchromosome 2 CDS131903 525 + 0.39619
VPA0144 D-lactate dehydrogenasechromosome 2 CDS139365 996 - 0.452811
VPA0156 hypothetical proteinchromosome 2 CDS151305 1173 + 0.464621
VPA0168 multidrug resistance protein Dchromosome 2 CDS163045 1206 - 0.501658
VPA0171 hypothetical proteinchromosome 2 CDS167782 762 + 0.459318
VPA0179 hypothetical proteinchromosome 2 CDS174486 2037 + 0.489445
VPA0188 immunogenic proteinchromosome 2 CDS185478 1011 + 0.480712
VPA0189 conserved hypothetical proteinchromosome 2 CDS186570 2124 + 0.481168
VPA0190 putative transcriptional regulatorchromosome 2 CDS188702 1227 + 0.467808
VPA0204 conserved hypothetical proteinchromosome 2 CDS205798 1545 + 0.462136
VPA0205 putative C-factorchromosome 2 CDS207342 708 + 0.485876
VPA0209 hexapeptide-repeatcontaining-acetyltransferasechromosome 2 CDS210105 555 + 0.479279
VPA0217 conserved hypothetical proteinchromosome 2 CDS219675 675 + 0.445926
VPA0218 hypothetical proteinchromosome 2 CDS220401 540 + 0.490741
VPA0220 conserved hypothetical proteinchromosome 2 CDS221475 552 - 0.45471
VPA0226 lecithin-dependent hemolysin (LDH)chromosome 2 CDS229683 1257 - 0.47494
VPA0233 phosphonoacetaldehyde phosphonohydrolasechromosome 2 CDS237342 816 - 0.501225
VPA0237 hypothetical proteinchromosome 2 CDS242149 411 + 0.445255
VPA0241 hypothetical proteinchromosome 2 CDS246294 909 + 0.475248
VPA0250 hypothetical proteinchromosome 2 CDS254384 831 + 0.448857
VPA0257 hemolysinchromosome 2 CDS261751 261 - 0.467433
VPA0258 MutT/nudix family proteinchromosome 2 CDS262345 519 + 0.445087
VPA0296 putative oxidoreductase proteinchromosome 2 CDS296248 1056 + 0.482955
VPA0304 conserved hypothetical proteinchromosome 2 CDS304283 357 - 0.47619
VPA0306 AnkB proteinchromosome 2 CDS306512 468 + 0.446581
VPA0313 hypothetical proteinchromosome 2 CDS311714 780 + 0.424359
VPA0314 hypothetical proteinchromosome 2 CDS312565 909 - 0.480748
VPA0317 putative transporter binding proteinchromosome 2 CDS315333 1731 + 0.456384
VPA0321 hypothetical proteinchromosome 2 CDS319047 291 + 0.453608
VPA0329 putative muconate cycloisomerase Ichromosome 2 CDS323611 993 - 0.512588
VPA0333 conserved hypothetical proteinchromosome 2 CDS326797 1209 - 0.468983
VPA0337 hypothetical proteinchromosome 2 CDS329056 897 - 0.439242
VPA0340 putative tellurite resistance protein-related proteinchromosome 2 CDS330685 588 - 0.464286
VPA0352 putative permease of ABC transporterchromosome 2 CDS343893 900 - 0.488889
VPA0353 hypothetical proteinchromosome 2 CDS344789 825 - 0.475152
VPA0382 putative sorbitol-6-phosphate 2-dehydrogenasechromosome 2 CDS377393 762 + 0.5
VPA0384 hypothetical proteinchromosome 2 CDS378712 1059 + 0.516525
VPA0403 putative membrane proteinchromosome 2 CDS400001 909 - 0.455446
VPA0442 hypothetical proteinchromosome 2 CDS432886 1398 + 0.433476
VPA0443 hypothetical proteinchromosome 2 CDS434249 1146 + 0.452007
VPA0465 putative NAD(P)H oxidoreductasechromosome 2 CDS460506 639 - 0.478873
VPA0467 putative ATP-binding component of ABC transporterchromosome 2 CDS462230 1572 + 0.474555
VPA0487 hypothetical proteinchromosome 2 CDS493210 372 + 0.419355
VPA0493 hypothetical proteinchromosome 2 CDS500263 792 - 0.460859
VPA0494 putative outer membrane proteinchromosome 2 CDS501243 534 + 0.475655
VPA0498 putative transport proteinchromosome 2 CDS504591 1758 + 0.489761
VPA0502 putative oxidoreductasechromosome 2 CDS508712 1272 + 0.471698
VPA0505 putative histidinol phosphatase and related hydrolases of the PHP familychromosome 2 CDS511331 747 + 0.46988
VPA0520 multidrug resistance protein Dchromosome 2 CDS526902 1194 + 0.457286
VPA0525 putative transporter, DME familychromosome 2 CDS529665 891 - 0.482604
VPA0533 putative acetyltransferasechromosome 2 CDS537313 423 + 0.437352
VPA0564 hypothetical proteinchromosome 2 CDS563886 609 - 0.440066
VPA0569 putative permeasechromosome 2 CDS568291 903 + 0.477298
VPA0570 hypothetical proteinchromosome 2 CDS569384 489 - 0.413088
VPA0574 putative methyltransferasechromosome 2 CDS573605 588 + 0.457483
VPA0581 hypothetical proteinchromosome 2 CDS580098 309 - 0.462783
VPA0589 putative cobalamin synthesis proteinchromosome 2 CDS586449 987 + 0.452888
VPA0601 putative arylsulfatase regulatorchromosome 2 CDS602654 1263 - 0.39034
VPA0613 putative permeasechromosome 2 CDS617839 879 + 0.492605
VPA0626 putative short-chain dehydrogenasechromosome 2 CDS631593 699 + 0.484979
VPA0681 hypothetical proteinchromosome 2 CDS704356 2316 + 0.47582
VPA0684 putative arylsulfatase regulatorchromosome 2 CDS709298 1302 + 0.478495
VPA0685 MoxR-related proteinchromosome 2 CDS710685 984 + 0.495935
VPA0686 hypothetical proteinchromosome 2 CDS711681 963 + 0.495327
VPA0688 conserved hypothetical proteinchromosome 2 CDS713215 1071 + 0.492063
VPA0689 hypothetical proteinchromosome 2 CDS714278 1731 + 0.487002
VPA0693 putative diacylglycerol kinasechromosome 2 CDS718885 900 + 0.49
VPA0698 putative arylsulfatase regulatorchromosome 2 CDS722457 1323 + 0.462585
VPA0699 hypothetical proteinchromosome 2 CDS723789 1128 + 0.47695
VPA0701 putative oxalate/formate antiporterchromosome 2 CDS726618 1233 - 0.479319
VPA0708 putative acetyltransferasechromosome 2 CDS734727 549 + 0.455373
VPA0709 HAD superfamily hydrolasechromosome 2 CDS735361 618 - 0.42233
VPA0712 putative GTPase YlqFchromosome 2 CDS739959 945 - 0.458201
VPA0727 putative nonspecific tight adherence protein TadDchromosome 2 CDS757951 1089 + 0.37741
VPA0749 conserved hypothetical proteinchromosome 2 CDS780272 723 + 0.477178
VPA0750 putative chloramphenicol-sensitive protein RarDchromosome 2 CDS781083 906 + 0.448124
VPA0752 glutathione S-transfersae-related proteinchromosome 2 CDS782192 387 + 0.434109
VPA0757 hypothetical proteinchromosome 2 CDS787957 885 - 0.463277
VPA0758 putative pyrophosphohydrolase, MutT familychromosome 2 CDS789046 459 + 0.455338
VPA0759 putative N-acetyltransferasechromosome 2 CDS789522 486 + 0.442387
VPA0776 mazG-related proteinchromosome 2 CDS806558 390 + 0.441026
VPA0779 hypothetical proteinchromosome 2 CDS809623 612 + 0.433007
VPA0790 putative YhfP proteinchromosome 2 CDS817214 1005 + 0.469652
VPA0800 hypothetical proteinchromosome 2 CDS826712 1242 - 0.372786
VPA0815 hypothetical proteinchromosome 2 CDS847567 975 - 0.467692
VPA0841 CbbY family proteinchromosome 2 CDS877162 669 + 0.408072
VPA0851 putative formate transporter 1chromosome 2 CDS885825 1452 - 0.452479
VPA0859 putative lipasechromosome 2 CDS896047 2409 - 0.462017
VPA0864 putative ABC transporter periplasmic solute binding proteinchromosome 2 CDS903007 1707 + 0.472173
VPA0866 putative oxidoreductase iron/ascorbate familychromosome 2 CDS906123 840 + 0.45119
VPA0868 conserved hypothetical proteinchromosome 2 CDS907844 1656 - 0.461957
VPA0877 putative lactam utilization proteinchromosome 2 CDS920116 756 - 0.453704
VPA0895 hypothetical proteinchromosome 2 CDS937565 717 - 0.539749
VPA0903 hypothetical proteinchromosome 2 CDS940888 1113 - 0.531896
VPA0908 putative replication initiation protein, phage-relatedchromosome 2 CDS943113 1818 - 0.494499
VPA0945 conserved hypothetical proteinchromosome 2 CDS980459 459 - 0.472767
VPA0946 conserved hypothetical proteinchromosome 2 CDS980928 420 - 0.469048
VPA0957 putative transporter binding proteinchromosome 2 CDS997829 1656 + 0.414855
VPA0973 putative MFS family transport proteinchromosome 2 CDS1018868 1161 + 0.481481
VPA0976 hypothetical proteinchromosome 2 CDS1022399 396 - 0.477273
VPA0981 anaerobic C4-dicarboxylate transporterchromosome 2 CDS1027050 1332 + 0.46997
VPA0986 nitrite reductase (NAD(P)H), small subunitchromosome 2 CDS1031544 330 - 0.481818
VPA0997 lipase-related proteinchromosome 2 CDS1049476 789 + 0.470215
VPA1008 conserved hypothetical proteinchromosome 2 CDS1061348 1455 - 0.461168
VPA1009 conserved hypothetical proteinchromosome 2 CDS1062812 1662 - 0.461492
VPA1010 MutT/nudix family proteinchromosome 2 CDS1064689 570 + 0.461404
VPA1015 putative succinate dehydrogenase subunit Sdhchromosome 2 CDS1068543 996 + 0.478916
VPA1016 multidrug resistance protein Dchromosome 2 CDS1069624 1134 - 0.448854
VPA1032 hypothetical proteinchromosome 2 CDS1088062 798 - 0.424812
VPA1044 hypothetical proteinchromosome 2 CDS1103236 2145 + 0.402797
VPA1053 conserved hypothetical proteinchromosome 2 CDS1111170 405 + 0.481481
VPA1054 putative nitrite reductase NADPH (small subunit) oxidoreductase proteinchromosome 2 CDS1111677 336 - 0.470238
VPA1066 putative acetyltransferasechromosome 2 CDS1124645 435 - 0.445977
VPA1117 putative short-chain dehydrogenasechromosome 2 CDS1179669 759 - 0.494071
VPA1135 putative acetyltransferasechromosome 2 CDS1199986 549 + 0.499089
VPA1140 conserved hypothetical proteinchromosome 2 CDS1204734 756 - 0.433862
VPA1143 putative molybdenum containing oxidoreductasechromosome 2 CDS1206611 1314 + 0.503044
VPA1146 hypothetical proteinchromosome 2 CDS1209420 603 - 0.457711
VPA1163 oxidoreductase, aldo/keto reductase 2 familychromosome 2 CDS1229079 909 - 0.465347
VPA1184 putative drug transport transmembrane proteinchromosome 2 CDS1253136 1179 - 0.469042
VPA1187 CbbY family proteinchromosome 2 CDS1257099 603 - 0.456053
VPA1205 acetoacetyl-CoA reductasechromosome 2 CDS1279176 741 - 0.470985
VPA1213 hypothetical proteinchromosome 2 CDS1286902 624 - 0.4375
VPA1215 hypothetical proteinchromosome 2 CDS1288149 942 + 0.476645
VPA1217 hypothetical proteinchromosome 2 CDS1289874 1038 - 0.463391
VPA1228 putative oxidoreductasechromosome 2 CDS1300241 978 - 0.448875
VPA1238 hypothetical proteinchromosome 2 CDS1311665 714 + 0.471989
VPA1239 putative ABC transporterchromosome 2 CDS1312538 1323 + 0.455782
VPA1243 putative cytosine deaminasechromosome 2 CDS1317445 1278 + 0.468701
VPA1245 hypothetical proteinchromosome 2 CDS1319398 639 + 0.458529
VPA1249 hypothetical proteinchromosome 2 CDS1322912 618 + 0.466019
VPA1261 putative ATP-binding proteinchromosome 2 CDS1335591 1422 - 0.417722
VPA1275 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 2 CDS1354576 720 + 0.468056
VPA1280 conserved hypothetical proteinchromosome 2 CDS1358589 1656 + 0.441425
VPA1281 oxidoreductase, Gfo/Idh/MocA familychromosome 2 CDS1360366 936 + 0.445513
VPA1283 putative MFS transporterchromosome 2 CDS1361618 1215 + 0.463374
VPA1288 hypothetical proteinchromosome 2 CDS1366246 849 + 0.486455
VPA1304 putative 3-oxoacyl-(acyl carrier protein) reductasechromosome 2 CDS1382733 720 - 0.490278
VPA1365 putative two-component response regulatorchromosome 2 CDS1436267 489 - 0.349693
VPA1394 putative transposition proteinchromosome 2 CDS1464181 954 - 0.390985
VPA1412 hypothetical polysaccharide biosynthesis related proteinchromosome 2 CDS1485361 1308 + 0.455657
VPA1413 hypothetical proteinchromosome 2 CDS1486671 402 + 0.440298
VPA1416 putative oxidoreductasechromosome 2 CDS1488287 1035 + 0.472464
VPA1427 CbbY family proteinchromosome 2 CDS1501877 651 + 0.462366
VPA1444 putative transport proteinchromosome 2 CDS1536750 1731 - 0.459272
VPA1450 MoxR-related proteinchromosome 2 CDS1543637 957 + 0.494253
VPA1452 hypothetical proteinchromosome 2 CDS1544608 927 + 0.468177
VPA1454 conserved hypothetical proteinchromosome 2 CDS1546062 987 + 0.468085
VPA1455 hypothetical proteinchromosome 2 CDS1547041 1857 + 0.481422
VPA1477 conserved hypothetical proteinchromosome 2 CDS1576604 1485 + 0.466667
VPA1484 hypothetical proteinchromosome 2 CDS1584962 1182 - 0.468697
VPA1487 putative acetyltransferasechromosome 2 CDS1588366 501 + 0.483034
VPA1490 conserved hypothetical proteinchromosome 2 CDS1589890 276 - 0.452899
VPA1495 ABC transporter, ATP-binding proteinchromosome 2 CDS1596172 1632 + 0.453431
VPA1509 threonine 3-dehydrogenasechromosome 2 CDS1612798 1032 - 0.471899
VPA1527 conserved hypothetical proteinchromosome 2 CDS1629699 756 - 0.462963
VPA1529 hypothetical proteinchromosome 2 CDS1631144 927 - 0.459547
VPA1571 putative acetyltransferasechromosome 2 CDS1668246 456 - 0.495614
VPA1573 hypothetical proteinchromosome 2 CDS1670088 471 - 0.464968
VPA1574 putative membrane transport proteinchromosome 2 CDS1670691 1191 + 0.47691
VPA1576 putative transmembrane proteinchromosome 2 CDS1672966 870 + 0.482759
VPA1583 putative membrane proteinchromosome 2 CDS1679854 1146 + 0.49651
VPA1587 conserved hypothetical proteinchromosome 2 CDS1683598 453 + 0.472406
VPA1595 putative prolyl aminopeptidasechromosome 2 CDS1692335 1296 + 0.486883
VPA1596 putative acetyltransferasechromosome 2 CDS1693707 489 - 0.435583
VPA1597 conserved hypothetical proteinchromosome 2 CDS1694521 981 + 0.471967
VPA1599 hypothetical proteinchromosome 2 CDS1697665 873 - 0.465063
VPA1605 hypothetical proteinchromosome 2 CDS1704585 390 - 0.423077
VPA1626 Sco1-related proteinchromosome 2 CDS1730065 615 + 0.491057
VPA1629 hypothetical proteinchromosome 2 CDS1731917 1077 + 0.47818
VPA1637 conserved hypothetical proteinchromosome 2 CDS1741747 1197 - 0.498747
VPA1647 hypothetical multidrug resistance protein Dchromosome 2 CDS1757631 1209 + 0.501241
VPA1648 hypothetical proteinchromosome 2 CDS1758919 1728 - 0.477431
VPA1650 putative zinc protease, insulinase familychromosome 2 CDS1762487 2748 - 0.487627
VPA1660 putative transport proteinchromosome 2 CDS1779042 1206 + 0.503317
VPA1680 putative exported proteinchromosome 2 CDS1801169 1098 + 0.509107
VPA1691 hypothetical proteinchromosome 2 CDS1809953 696 + 0.45546
VPA1696 hypothetical proteinchromosome 2 CDS1814435 993 - 0.479355
VPA1722 hypothetical proteinchromosome 2 CDS1839187 240 - 0.429167
VPA1724 sodium/proline symporterchromosome 2 CDS1840181 1494 - 0.485274
VPA1738 putative tryptophan repressor binding proteinchromosome 2 CDS1860307 594 + 0.494949
VPA1743 GckR family proteinchromosome 2 CDS1864561 903 + 0.490587
VPA1748 chloramphenicol acetyltransferasechromosome 2 CDS1869943 660 + 0.468182
VPA1750 hypothetical proteinchromosome 2 CDS1872765 2052 - 0.453216