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2024-05-03 03:18:34

Gene list

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COG category: General function prediction only
Organism: Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120

Number of genes found: 179

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Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pro1597 Membrane associated GTPasechromosome CDS1453404 1323 + 0.39607
NA Pro1033 Membrane associated GTPasechromosome CDS947426 1563 + 0.364683
NA Pro1238 Alpha/beta superfamily hydrolasechromosome CDS1142495 1113 - 0.372866
NA Pro0019 Predicted GTPasechromosome CDS20834 930 + 0.304301
NA Pro1324 SAM-dependent methyltransferasechromosome CDS1225302 717 + 0.277545
NA Pro0428 Uncharacterized Zn ribbon-containing conserved proteinchromosome CDS410622 528 - 0.359848
NA Pro1773 Probable N-acyl-L-amino acid amidohydrolasechromosome CDS1628013 1197 - 0.399332
NA Pro0516 Predicted metal-dependent membrane proteasechromosome CDS491811 1359 + 0.380427
NA Pro1045 Nitrilase homologchromosome CDS960760 822 - 0.411192
NA Pro1662 Uncharacterized proteinchromosome CDS1523740 663 - 0.39819
NA Pro0953 DIM6/NTAB family proteinchromosome CDS869857 483 + 0.403727
NA Pro1847 Predicted pyrophosphatasechromosome CDS1705247 831 + 0.315283
NA Pro1427 SAM-dependent methyltransferasechromosome CDS1326981 759 - 0.334651
NA Pro1855 Predicted PP-loop superfamily ATPasechromosome CDS1713805 684 + 0.374269
NA Pro1507 WD-40 repeat proteinchromosome CDS1383013 1074 + 0.456238
NA Pro0701 Predicted proteinchromosome CDS642190 330 + 0.372727
NA Pro0837 Unclassified ABC-type transport system permeasechromosome CDS763159 1212 + 0.325908
NA Pro1198 Predicted protein family PM-8chromosome CDS1110734 432 + 0.337963
NA Pro1506 Putative GTPase, G3E familychromosome CDS1381643 1383 + 0.439624
NA Pro0388 Predicted GTPasechromosome CDS373321 1371 + 0.40992
NA Pro0165 RNA-binding protein, RRM domainchromosome CDS165060 435 + 0.404598
NA Pro0985 Fe-S cluster proteinchromosome CDS904075 360 + 0.363889
NA Pro1443 Predicted proteinchromosome CDS1340096 168 + 0.39881
NA Pro1187 Inactivated Zn-dependent hydrolase of the beta-lactamase foldchromosome CDS1103408 750 - 0.362667
NA Pro0983 Predicted phosphatase/phosphohexomutase of HAD familychromosome CDS901144 753 - 0.324037
NA Pro0309 Predicted DNA repair enzyme, contains HhH domain and nuclease of RecB familychromosome CDS300107 1464 - 0.344945
NA Pro1228 Predicted proteinchromosome CDS1130800 252 - 0.333333
NA Pro0607 Superfamily I DNA/RNA helicasechromosome CDS566030 3558 + 0.371276
NA Pro0079 ABC-type uncharacterized transport system permease and ATPase componentchromosome CDS88537 1989 - 0.330317
NA Pro1653 Metal-dependent membrane proteasechromosome CDS1513430 915 - 0.379235
NA Pro0013 RNA-binding protein, RRM domainchromosome CDS16279 759 + 0.600791
NA Pro0207 Predicted metal-dependent hydrolasechromosome CDS202749 588 + 0.346939
NA Pro0391 Predicted enzyme with a TIM-barrel foldchromosome CDS376037 624 + 0.375
NA Pro0264 Predicted amidasechromosome CDS260097 801 + 0.398252
NA Pro0327 Photosystem II stability/assembly factorchromosome CDS317467 1020 + 0.40098
NA Pro1057 Uncharacterized proteinchromosome CDS974420 1197 - 0.357561
NA Pro1278 Predicted hydrolase, HAD superfamilychromosome CDS1179653 660 + 0.319697
NA Pro1357 Uncharacterized conserved membrane proteinchromosome CDS1257588 738 - 0.410569
NA Pro0376 Predicted flavoproteinchromosome CDS363741 1242 - 0.37037
NA Pro1040 SAM-dependent methyltransferasechromosome CDS954354 1068 + 0.345506
NA Pro0931 Uncharacterized conserved membrane proteinchromosome CDS846645 315 - 0.355556
NA Pro0489 Putative GTPase, G3E familychromosome CDS466199 1077 - 0.33519
NA Pro0720 Uncharacterized conserved membrane proteinchromosome CDS656300 780 - 0.346154
NA Pro1012 Predicted phosphoesterasechromosome CDS929138 783 - 0.384419
NA Pro0941 Sugar phosphate isomerasechromosome CDS855876 936 + 0.318376
NA Pro1319 FAD dependent oxidoreductasechromosome CDS1220127 1227 + 0.341483
NA Pro0039 Predicted membrane proteinchromosome CDS38158 612 + 0.393791
NA Pro0043 Predicted flavoproteinchromosome CDS41413 534 - 0.397004
NA Pro1558 Predicted enzyme of the cupin superfamilychromosome CDS1420049 276 + 0.40942
NA Pro0729 Predicted hydrolase, HAD superfamilychromosome CDS663855 804 + 0.343284
NA Pro1774 Secreted TPR repeats proteinchromosome CDS1629206 786 - 0.400763
NA Pro0795 Fe-S oxidoreductases of moaA/nifB/pqqE familychromosome CDS718321 930 - 0.341935
NA Pro1545 Zn-dependent proteasechromosome CDS1412082 1146 + 0.366492
NA Pro1601 Uncharacterized membrane proteinchromosome CDS1458214 1101 - 0.409628
NA Pro0365 HD superfamily phosphohydrolasechromosome CDS347242 1263 - 0.31829
NA Pro0798 Homoserine/choline kinase family proteinchromosome CDS722345 1152 + 0.269965
NA Pro0851 Putative GTPase, G3E familychromosome CDS776653 1074 + 0.360335
NA Pro0836 Unclassified ABC-type transport system ATPase componentchromosome CDS762434 729 + 0.390947
NA Pro1723 Predicted metal-dependent protease of the PAD1/JAB1 superfamilychromosome CDS1574688 528 + 0.342803
NA Pro1787 Uncharacterized P-loop hydrolasechromosome CDS1639954 507 + 0.360947
NA Pro0241 Predicted permeasechromosome CDS237318 996 - 0.37249
NA Pro1636 Predicted Fe-S-cluster redox enzymechromosome CDS1488769 1047 - 0.373448
NA Pro0218 ATPase components of various ABC-type transport systemschromosome CDS214959 1623 + 0.386322
NA Pro1614 GTP cyclohydrolase I family enzymechromosome CDS1469169 408 - 0.35049
NA Pro1812 Metallo-beta-lactamase superfamily hydrolasechromosome CDS1667692 1944 - 0.403292
NA Pro0956 PHP family metal-dependent phosphoesterasechromosome CDS872949 654 + 0.344037
NA Pro1149 SufE proteinchromosome CDS1078158 444 + 0.351351
NA Pro1077 Alpha/beta superfamily hydrolasechromosome CDS997399 1608 + 0.392413
NA Pro0270 Predicted SAM-dependent methyltransferasechromosome CDS266820 642 + 0.316199
NA Pro1131 Predicted membrane-associated HD superfamily hydrolasechromosome CDS1059598 2121 + 0.373409
NA Pro1109 Alpha/beta superfamily hydrolasechromosome CDS1036509 882 + 0.360544
NA Pro1630 Predicted oxidoreductasechromosome CDS1483634 1224 - 0.383987
NA Pro0437 Predicted oxidoreductase, aldo/keto reductase familychromosome CDS420520 1137 - 0.378188
NA Pro1154 Predicted serine peptidase (alpha/beta hydrolase superfamily) fused to N-terminal uncharacterized domain specific to cyanobacteriachromosome CDS1082940 1632 - 0.354167
NA Pro1352 Circadian phase modifier CpmA homologchromosome CDS1253660 672 - 0.404762
NA Pro0238 Predicted protein with signal peptidechromosome CDS235194 567 - 0.368607
NA Pro0730 Phosphoribulokinase/uridine kinase family enzymechromosome CDS664663 1020 + 0.332353
NA Pro1204 MIF/Phenylpyruvate tautomerase family proteinchromosome CDS1115324 339 - 0.371681
NA Pro1309 Tetrapyrrole methylase family proteinchromosome CDS1209387 918 + 0.373638
NA Pro1261 Zn-dependent hydrolase of the beta-lactamase fold, partialchromosome CDS1159507 1419 - 0.324877
NA Pro0317 NUDIX/MutT family pyrophosphohydrolasechromosome CDS308737 561 - 0.4082
NA Pro1726 ATP-utilizing enzyme, PP-loop superfamilychromosome CDS1577671 858 + 0.364802
NA Pro1197 RNA-binding protein, RRM domainchromosome CDS1110206 297 - 0.40404
NA Pro1201 Predicted permeasechromosome CDS1112424 921 + 0.343105
NA Pro0865 Predicted hydrolase of the HAD superfamilychromosome CDS788939 513 - 0.292398
NA Pro1452 Na+-dependent transporter of the SNF familychromosome CDS1346303 1332 - 0.406907
NA Pro0299 Predicted esterasechromosome CDS291429 606 + 0.356436
NA Pro1386 Conserved membrane protein, contains PIN domainchromosome CDS1290126 1110 + 0.364865
NA Pro1046 Phosphosulfolactate phosphohydrolase related enzymechromosome CDS961612 732 - 0.385246
NA Pro0533 Predicted dehydrogenasechromosome CDS509626 1044 + 0.411877
NA Pro0138 TPR-repeat protein, specific for cyanobacteriachromosome CDS141244 420 + 0.366667
NA Pro0531 Creatinine amidohydrolase related enzymechromosome CDS507847 834 + 0.40048
NA Pro0140 Predicted nucleoside-diphosphate sugar epimerasechromosome CDS142902 939 - 0.397231
NA Pro0154 TPR-repeat proteinchromosome CDS155480 522 + 0.369732
NA Pro0772 Predicted ATPasechromosome CDS700385 1044 - 0.358238
NA Pro0220 Predicted GTPasechromosome CDS217549 864 - 0.384259
NA Pro1508 Putative GTPase, G3E familychromosome CDS1384141 1089 + 0.311295
NA Pro0917 Uncharacterized proteinchromosome CDS833911 276 - 0.315217
NA Pro1101 Rhodanese family sulfurtransferasechromosome CDS1026964 966 - 0.375776
NA Pro1823 TPR-repeat proteinchromosome CDS1680948 558 + 0.302867
NA Pro1661 ubiE/COQ5 family methyltransferasechromosome CDS1522811 930 - 0.337634
NA Pro0210 Inactivated Zn-dependent hydrolase of the beta-lactamase foldchromosome CDS204427 738 + 0.380759
NA Pro0006 Secreted TPR repeats proteinchromosome CDS8558 876 - 0.297945
NA Pro1211 Predicted phosphoribosyltransferasechromosome CDS1119493 387 - 0.392765
NA Pro0930 Uncharacterized conserved membrane proteinchromosome CDS846334 315 - 0.355556
aarF Pro1113 Predicted protein kinasechromosome CDS1040409 1647 + 0.32119
aarF Pro1883 Predicted protein kinasechromosome CDS1747375 1848 + 0.314935
aarF Pro0236 Predicted protein kinasechromosome CDS233165 1680 - 0.36131
cinA Pro0289 CinA ortholog, predicted molybdopterin binding domainchromosome CDS280047 1272 - 0.350629
cioY Pro1031 Uncharacterized BioY family conserved membrane proteinchromosome CDS946328 585 + 0.353846
dfa1 Pro0045 Diflavin flavoproteinchromosome CDS43837 1773 - 0.382967
dfa3 Pro0044 Diflavin flavoproteinchromosome CDS41993 1845 - 0.368022
elaC Pro1430 Metallo-beta-lactamase superfamily enzymechromosome CDS1330159 963 + 0.398754
era Pro1355 GTPase, Era homologchromosome CDS1256009 945 - 0.384127
fabG Pro0476 Short-chain dehydrogenase/reductase family enzymechromosome CDS454301 762 - 0.33727
fabG Pro0535 Short-chain dehydrogenase/reductase family enzymechromosome CDS511717 708 + 0.408192
fabG Pro0789 Short-chain dehydrogenase/reductase family enzymechromosome CDS712632 711 - 0.347398
fabG Pro0710 Short-chain dehydrogenase/reductase family enzymechromosome CDS651677 666 + 0.381381
fabG Pro0452 Short-chain dehydrogenase/reductase family enzymechromosome CDS434454 753 - 0.40239
fcbC Pro0358 Predicted thioesterasechromosome CDS342930 450 + 0.384444
fcbC Pro0198 Predicted thioesterasechromosome CDS195055 468 + 0.378205
gcvT Pro0308 Aminomethyltransferase related to glycine cleavage protein Tchromosome CDS299247 843 + 0.32503
gloB Pro1402 Metallo-beta-lactamase superfamily hydrolasechromosome CDS1301377 636 - 0.407233
gloB Pro0561 Metallo-beta-lactamase superfamily hydrolasechromosome CDS532524 762 - 0.35958
gloB Pro1462 Metallo-beta-lactamase superfamily hydrolasechromosome CDS1356227 903 + 0.404208
glpG Pro1220 Membrane serine protease of rhomboid familychromosome CDS1125517 588 - 0.331633
gph Pro0350 Predicted HAD superfamily phosphatasechromosome CDS337609 768 - 0.332031
gph Pro1594 Predicted HAD superfamily phosphatasechromosome CDS1450200 786 + 0.370229
hcaE Pro0890 Rieske 2Fe-2S family proteinchromosome CDS807436 1338 - 0.316891
hit Pro0080 HIT family hydrolasechromosome CDS90732 342 - 0.362573
lipA Pro1069 Probable alpha/beta superfamily lipasechromosome CDS989172 624 - 0.357372
mazG Pro0924 Predicted MazG family pyrophosphatasechromosome CDS840991 330 + 0.4
menC Pro0200 O-succinylbenzoate-CoA synthasechromosome CDS196740 972 - 0.385802
mhpC Pro1250 Alpha/beta superfamily hydrolasechromosome CDS1151116 975 + 0.366154
mhpC Pro1757 Alpha/beta superfamily hydrolasechromosome CDS1610658 906 - 0.392936
mhpC Pro1790 Predicted hydrolasechromosome CDS1642645 912 + 0.330044
mqoA Pro0418 Malate:quinone oxidoreductasechromosome CDS399080 1491 + 0.397049
mviM Pro0857 Predicted dehydrogenasechromosome CDS781571 1113 - 0.370171
mviM Pro0305 Predicted dehydrogenasechromosome CDS296140 1005 - 0.40398
mviN Pro0293 Uncharacterized membrane proteinchromosome CDS283501 1617 - 0.319728
nadE Pro1599 NAD synthasechromosome CDS1455310 1695 + 0.385841
obg Pro0246 Predicted GTPasechromosome CDS244212 990 + 0.386869
perM Pro0770 Uncharacterized conserved membrane proteinchromosome CDS698877 978 - 0.328221
pheT Pro0966 Phenylalanyl-tRNA synthetase beta subunitchromosome CDS886946 2514 - 0.322991
pmbA Pro0996 Predicted inactivated Zn-dependent proteasechromosome CDS912772 1380 + 0.342029
por Pro0791 Light dependent protochlorophyllide oxido-reductasechromosome CDS714903 1005 + 0.316418
por Pro1537 Light dependent protochlorophyllide oxido-reductasechromosome CDS1404505 948 - 0.401899
por Pro0543 Light dependent protochlorophyllide oxido-reductasechromosome CDS516744 1020 + 0.403922
pqqL Pro0818 Zn-dependent peptidasechromosome CDS741583 1278 - 0.366197
pqqL Pro0817 Zn-dependent peptidasechromosome CDS740329 1254 - 0.310207
proP Pro1155 Permease of the major facilitator superfamilychromosome CDS1084544 1275 + 0.345882
proP Pro1861 Permease of the major facilitator superfamilychromosome CDS1719055 1260 + 0.378571
proP Pro1576 Permease of the major facilitator superfamilychromosome CDS1434616 1269 - 0.382191
pta Pro0477 BioD-like N-terminal domain of phosphotransacetylasechromosome CDS455240 1071 + 0.395892
pucC Pro0346 Possible PucC proteinchromosome CDS332950 1296 - 0.357253
putP Pro1635 Na+/proline symporterchromosome CDS1486955 1764 - 0.401361
rhaT Pro1477 Permease of the drug/metabolite transporter, DMT superfamilychromosome CDS1364916 675 - 0.33037
rhaT Pro0756 Permease of the drug/metabolite transporter, DMT superfamilychromosome CDS686395 888 - 0.368243
rhaT Pro1295 Permease of the drug/metabolite transporter, DMT superfamilychromosome CDS1196648 963 - 0.382139
rimI Pro1106 Acetyltransferase, GNAT familychromosome CDS1032104 462 + 0.32684
sfsA Pro0294 DNA-binding protein, stimulates sugar fermentationchromosome CDS285201 756 + 0.391534
smtA Pro1447 SAM-dependent methyltransferasechromosome CDS1342211 648 - 0.33642
smtA Pro1285 SAM-dependent methyltransferasechromosome CDS1185095 660 + 0.333333
smtA Pro1277 SAM-dependent methyltransferasechromosome CDS1178442 882 + 0.31746
smtA Pro0816 SAM-dependent methyltransferasechromosome CDS739564 693 + 0.36075
smtA Pro1333 SAM-dependent methyltransferasechromosome CDS1236299 864 - 0.295139
spoIVFB Pro0539 Metal dependent membrane associated protease, S2P familychromosome CDS513931 1266 + 0.364929
ssnA Pro1378 Cytosine deaminasechromosome CDS1281331 1299 - 0.388761
surE Pro1345 Predicted acid phosphatasechromosome CDS1249282 789 + 0.401774
thdF Pro0214 Predicted GTPasechromosome CDS209078 1368 - 0.372807
tldD Pro0995 Predicted Zn-dependent proteasechromosome CDS911318 1452 + 0.369146
tlyC Pro1596 Membrane associated SBC domainschromosome CDS1452421 987 + 0.380952
tlyC Pro0306 Conserved membrane protein containing two CBS domainschromosome CDS297180 1287 - 0.364413
uup Pro0105 ATPase components of ABC transporterschromosome CDS114223 1710 + 0.343275
uup Pro1196 ATPase components of ABC transporters, duplicated ATPase domainchromosome CDS1108136 1932 + 0.357143
wecD Pro1802 Acetyltransferasechromosome CDS1655799 462 + 0.372294
wecD Pro0564 Acetyltransferase, GNAT familychromosome CDS535799 543 + 0.38674
wecD Pro0877 Acetyltransferasechromosome CDS798633 891 + 0.344557
wecD Pro1860 Acetyltransferase, GNAT familychromosome CDS1718532 492 - 0.357724