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2024-05-07 08:44:13

Gene list

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COG category: General function prediction only
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 232

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_0960 4-hydroxybenzoyl-CoA thioesterasechromosome CDS1001167 381 + 0.356955
NA Tmden_1591 TniBchromosome CDS1668927 942 + 0.378981
NA Tmden_0239 Protein of unknown function DUF87chromosome CDS246116 1740 + 0.34023
NA Tmden_0331 conserved hypothetical proteinchromosome CDS331584 591 + 0.336717
NA Tmden_2078 hydrolases of the HAD superfamily-likechromosome CDS2166969 831 - 0.34657
NA Tmden_0932 ABC-1chromosome CDS971942 1545 + 0.330744
NA Tmden_0850 Beta-lactamase-likechromosome CDS878877 594 - 0.373737
NA Tmden_1987 Radical SAMchromosome CDS2068570 1122 + 0.35918
NA Tmden_1824 Glutamate synthase (NADPH)chromosome CDS1908200 2034 - 0.397738
NA Tmden_0781 CinA-likechromosome CDS809263 1089 + 0.325987
NA Tmden_0861 conserved hypothetical proteinchromosome CDS888732 426 + 0.29108
NA Tmden_0686 Amidohydrolasechromosome CDS697775 1227 - 0.365933
NA Tmden_0619 sulfide-quinone reductase, putativechromosome CDS629338 1470 - 0.404082
NA Tmden_0182 Radical SAMchromosome CDS184031 1110 - 0.322523
NA Tmden_0890 hypothetical proteinchromosome CDS920787 684 + 0.350877
NA Tmden_1692 Radical SAMchromosome CDS1772124 873 + 0.355097
NA Tmden_0762 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferasechromosome CDS789390 798 - 0.339599
NA Tmden_0452 conserved hypothetical proteinchromosome CDS450444 240 + 0.370833
NA Tmden_2062 putative methyl transferasechromosome CDS2153113 693 - 0.31746
NA Tmden_1548 Molybdenum-pterin binding proteinchromosome CDS1619673 414 + 0.362319
NA Tmden_0192 conserved hypothetical proteinchromosome CDS195165 726 - 0.298898
NA Tmden_1281 membrane protein, putativechromosome CDS1352560 2487 - 0.30961
NA Tmden_0587 conserved hypothetical proteinchromosome CDS594707 735 - 0.292517
NA Tmden_0770 IMP dehydrogenasechromosome CDS796010 1446 - 0.383817
NA Tmden_0653 ATPase associated with various cellular activities, AAA_3chromosome CDS666433 948 + 0.381857
NA Tmden_1203 Histidine triad (HIT) proteinchromosome CDS1269409 495 - 0.381818
NA Tmden_0648 von Willebrand factor, type Achromosome CDS660791 924 + 0.347403
NA Tmden_1027 Protein of unknown function DUF336chromosome CDS1081947 504 - 0.39881
NA Tmden_0413 DNA uptake lipoprotein-likechromosome CDS410278 861 + 0.348432
NA Tmden_0196 hypothetical proteinchromosome CDS198900 1530 - 0.270588
NA Tmden_0590 transferase hexapeptide repeatchromosome CDS597511 744 - 0.329301
NA Tmden_0785 conserved hypothetical proteinchromosome CDS814690 1173 + 0.312873
NA Tmden_0784 Fibronectin, type IIIchromosome CDS813344 1335 + 0.335581
NA Tmden_1449 methyltransferase, putativechromosome CDS1518563 606 - 0.336634
NA Tmden_1378 GTP-binding protein Erachromosome CDS1447780 903 + 0.334441
NA Tmden_1677 Protein of unknown function UPF0118chromosome CDS1759909 993 - 0.327291
NA Tmden_1227 Short-chain dehydrogenase/reductase SDRchromosome CDS1295261 783 + 0.401022
NA Tmden_1321 Patatinchromosome CDS1390622 762 + 0.368766
NA Tmden_1950 Protein of unknown function DUF6, transmembranechromosome CDS2033479 891 - 0.409652
NA Tmden_2004 Protein of unknown function DUF191chromosome CDS2086761 864 + 0.376157
NA Tmden_1215 DJ-1chromosome CDS1282568 558 - 0.399642
NA Tmden_1414 GTP-binding protein, HSR1-relatedchromosome CDS1478945 1110 - 0.364865
NA Tmden_0213 KpsF/GutQchromosome CDS217018 963 - 0.38837
NA Tmden_0729 Protein of unknown function UPF0153chromosome CDS751152 384 + 0.361979
NA Tmden_0939 HipA-like-likechromosome CDS979298 1584 + 0.291035
NA Tmden_1090 Molybdopterin binding domainchromosome CDS1150104 732 + 0.295082
NA Tmden_1579 transferase hexapeptide repeatchromosome CDS1656045 528 + 0.407197
NA Tmden_0134 GCN5-related N-acetyltransferasechromosome CDS138753 552 - 0.360507
NA Tmden_1149 ABC transporter-related proteinchromosome CDS1205238 723 - 0.385892
NA Tmden_1782 ATPase associated with various cellular activities, AAA_3chromosome CDS1864760 996 - 0.388554
NA Tmden_0395 Phosphoribosyltransferasechromosome CDS394727 459 + 0.318083
NA Tmden_1307 putative ABC-2 type transport system permease proteinchromosome CDS1377910 828 + 0.323671
NA Tmden_1108 conserved hypothetical proteinchromosome CDS1164692 324 - 0.339506
NA Tmden_1760 Ferritin and Dpschromosome CDS1843181 516 - 0.350775
NA Tmden_0569 putative integral membrane proteinchromosome CDS570981 1194 + 0.277219
NA Tmden_1237 HI0933-like proteinchromosome CDS1303139 1239 + 0.380145
NA Tmden_1115 Peptidase M50chromosome CDS1170252 684 + 0.345029
NA Tmden_1965 CopG-like DNA-bindingchromosome CDS2047069 210 + 0.380952
NA Tmden_0654 conserved hypothetical proteinchromosome CDS667388 831 + 0.33574
NA Tmden_0829 Protein of unknown function DUF395, YeeE/YedEchromosome CDS859668 1221 - 0.371007
NA Tmden_1326 Sodium/proline symporterchromosome CDS1395264 1467 - 0.370825
NA Tmden_1474 Oligosaccharyl transferase, STT3 subunitchromosome CDS1546063 2100 - 0.33381
NA Tmden_0744 membrane protein, putativechromosome CDS767844 783 - 0.323116
NA Tmden_0995 permease YjgP/YjgQchromosome CDS1046747 1020 - 0.319608
NA Tmden_0594 acetyl transferasechromosome CDS602407 576 + 0.329861
NA Tmden_0070 Major facilitator superfamily MFS_1chromosome CDS77263 1317 - 0.367502
NA Tmden_2072 Aminoglycoside phosphotransferasechromosome CDS2161742 939 + 0.325879
NA Tmden_1150 Protein of unknown function UPF0079chromosome CDS1205948 414 - 0.311594
NA Tmden_0526 tRNA modification GTPase TrmEchromosome CDS525845 1341 + 0.376585
NA Tmden_0603 Short-chain dehydrogenase/reductase SDRchromosome CDS610863 771 + 0.298314
NA Tmden_0656 von Willebrand factor, type Achromosome CDS668618 930 + 0.337634
NA Tmden_0807 hypothetical proteinchromosome CDS842513 486 - 0.255144
NA Tmden_1688 Succinylglutamate desuccinylase/aspartoacylasechromosome CDS1767434 1053 + 0.361823
NA Tmden_0993 globinchromosome CDS1045528 462 - 0.316017
NA Tmden_1638 transformation system proteinchromosome CDS1720320 576 + 0.317708
NA Tmden_1546 generic methyltransferasechromosome CDS1616921 651 + 0.423963
NA Tmden_0189 Methylase involved in ubiquinone/menaquinone biosynthesis-likechromosome CDS192095 828 + 0.282609
NA Tmden_1851 conserved hypothetical proteinchromosome CDS1933105 870 - 0.393103
NA Tmden_1972 5-methylthioribose kinasechromosome CDS2055318 1221 - 0.341523
NA Tmden_0394 hypothetical proteinchromosome CDS394009 579 - 0.378238
NA Tmden_1668 TPR repeatchromosome CDS1750399 2340 + 0.330342
NA Tmden_1100 conserved hypothetical proteinchromosome CDS1157907 249 - 0.301205
NA Tmden_0195 Radical SAMchromosome CDS197882 1029 - 0.272109
NA Tmden_1421 transferase hexapeptide repeatchromosome CDS1485603 579 - 0.374784
NA Tmden_1454 Na+/solute symporterchromosome CDS1525600 1665 - 0.386186
NA Tmden_0144 Protein of unknown function DUF1234chromosome CDS149292 531 - 0.387947
NA Tmden_1235 Protein of unknown function UPF0001chromosome CDS1301557 675 + 0.339259
NA Tmden_0709 conserved hypothetical proteinchromosome CDS722865 780 + 0.30641
NA Tmden_0045 putative MFS metabolite transporterchromosome CDS52872 1182 + 0.320643
NA Tmden_0164 hypothetical proteinchromosome CDS166094 588 - 0.360544
NA Tmden_1792 hypothetical proteinchromosome CDS1874707 624 - 0.325321
NA Tmden_1079 Phosphatase kdsCchromosome CDS1139974 480 - 0.352083
NA Tmden_0443 TPR repeatchromosome CDS443994 582 + 0.335052
NA Tmden_1142 WD-40 repeatchromosome CDS1197050 2124 - 0.306968
NA Tmden_0892 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylasechromosome CDS922668 645 + 0.322481
NA Tmden_1856 Short-chain dehydrogenase/reductase SDRchromosome CDS1940540 708 + 0.399718
NA Tmden_0321 PAP2 superfamily proteinchromosome CDS325577 681 + 0.312775
NA Tmden_0276 hypothetical proteinchromosome CDS294404 597 - 0.355109
NA Tmden_0651 hypothetical proteinchromosome CDS664269 1005 + 0.356219
NA Tmden_1076 GTP-bindingchromosome CDS1138342 618 - 0.326861
NA Tmden_0848 Generic methyltransferasechromosome CDS877487 891 + 0.342312
NA Tmden_1046 Aminodeoxychorismate lyasechromosome CDS1109527 1041 + 0.325648
NA Tmden_1586 Short-chain dehydrogenase/reductase SDRchromosome CDS1662020 816 - 0.372549
NA Tmden_0341 Auxin Efflux Carrierchromosome CDS339557 909 - 0.323432
NA Tmden_0901 Oxidoreductase-likechromosome CDS934236 909 - 0.343234
NA Tmden_0374 ComEC/Rec2-related proteinchromosome CDS374203 1263 - 0.338876
NA Tmden_0600 Oxidoreductase-likechromosome CDS607783 1023 + 0.343109
NA Tmden_1211 Virulence factor MVIN-likechromosome CDS1277601 1407 + 0.324805
NA Tmden_2054 Protein of unknown function UPF0005chromosome CDS2146719 699 + 0.337625
NA Tmden_1873 hypothetical proteinchromosome CDS1953969 561 - 0.299465
NA Tmden_1693 conserved hypothetical proteinchromosome CDS1772985 378 - 0.330688
NA Tmden_1069 Protein of unknown function DUF45chromosome CDS1132669 678 - 0.297935
NA Tmden_1144 CoA-bindingchromosome CDS1200388 429 - 0.368298
NA Tmden_1175 Glutamate synthase, NADH/NADPH, small subunit 2chromosome CDS1229079 1386 - 0.371573
NA Tmden_0723 conserved hypothetical proteinchromosome CDS745442 1080 - 0.337963
NA Tmden_0034 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS41083 936 + 0.362179
NA Tmden_1507 ABC transporter-related proteinchromosome CDS1580821 1605 + 0.36324
NA Tmden_1519 putative periplasmic proteinchromosome CDS1594088 951 + 0.313354
NA Tmden_0194 hypothetical proteinchromosome CDS196965 915 - 0.31694
NA Tmden_0188 Radical SAMchromosome CDS191250 840 + 0.313095
NA Tmden_0754 HI0933-like proteinchromosome CDS781444 1191 - 0.38707
NA Tmden_0670 Exopolyphosphatase-related proteins-likechromosome CDS684132 882 + 0.325397
NA Tmden_0004 GTP cyclohydrolase Ichromosome CDS5041 378 + 0.306878
NA Tmden_0161 conserved hypothetical proteinchromosome CDS162700 882 + 0.333333
NA Tmden_0870 phenylalanyl-tRNA synthetase, beta subunitchromosome CDS896601 2337 + 0.32991
NA Tmden_1961 Pyridoxamine 5'-phosphate oxidase-related, FMN-bindingchromosome CDS2043600 474 - 0.318565
NA Tmden_0711 Endonuclease/exonuclease/phosphatasechromosome CDS730402 1005 - 0.301493
NA Tmden_0467 permease YjgP/YjgQchromosome CDS469479 1080 + 0.312963
NA Tmden_1396 TPR repeatchromosome CDS1464634 930 - 0.310753
NA Tmden_1720 PilT protein-likechromosome CDS1800609 408 + 0.316176
NA Tmden_0694 TniBchromosome CDS706330 942 + 0.378981
NA Tmden_0657 von Willebrand factor, type Achromosome CDS669544 1788 + 0.347315
NA Tmden_1525 hypothetical proteinchromosome CDS1597988 597 - 0.340034
NA Tmden_1893 ABC transporter-related proteinchromosome CDS1974375 690 - 0.369565
NA Tmden_0392 GTPase family proteinchromosome CDS391778 1485 - 0.360269
NA Tmden_0790 hypothetical proteinchromosome CDS820123 639 + 0.323944
NA Tmden_1371 conserved hypothetical proteinchromosome CDS1441627 1209 - 0.331679
NA Tmden_0794 hypothetical proteinchromosome CDS823380 1236 + 0.345469
NA Tmden_2060 Twin-arginine translocation pathway signalchromosome CDS2151066 1338 - 0.381166
NA Tmden_0728 Methyltransferase smallchromosome CDS750469 696 + 0.333333
NA Tmden_1970 Short-chain dehydrogenase/reductase SDRchromosome CDS2052283 1962 - 0.38736
NA Tmden_0405 Peptidase M16-likechromosome CDS401884 1284 + 0.349688
NA Tmden_1214 conserved hypothetical proteinchromosome CDS1281673 930 + 0.347312
NA Tmden_1728 hypothetical proteinchromosome CDS1810670 1491 - 0.371563
NA Tmden_1736 HI0933-like proteinchromosome CDS1821458 1155 - 0.393074
NA Tmden_0170 Protein of unknown function UPF0025chromosome CDS170621 522 - 0.346743
NA Tmden_1222 Alpha/beta hydrolase foldchromosome CDS1288776 789 + 0.334601
NA Tmden_0511 methyltransferasechromosome CDS513755 708 + 0.330508
NA Tmden_1879 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS1958400 1191 - 0.379513
NA Tmden_2070 Na+/solute symporterchromosome CDS2159181 1470 + 0.372109
NA Tmden_2093 conserved hypothetical proteinchromosome CDS2186907 1071 + 0.353875
NA Tmden_0649 von Willebrand factor, type Achromosome CDS661711 1416 + 0.344633
NA Tmden_1774 conserved hypothetical proteinchromosome CDS1857550 381 - 0.317585
NA Tmden_1902 Molybdopterin oxidoreductasechromosome CDS1984004 2076 - 0.371387
NA Tmden_1948 Pyridoxamine 5'-phosphate oxidase-related, FMN-bindingchromosome CDS2032335 474 - 0.335443
NA Tmden_1071 Protein of unknown function UPF0054chromosome CDS1134272 420 + 0.345238
NA Tmden_1848 Protein of unknown function DUF52chromosome CDS1930767 789 - 0.365019
NA Tmden_1161 Rhodanese-likechromosome CDS1216085 1095 - 0.36621
NA Tmden_0730 conserved hypothetical protein-TPR repeat-containingchromosome CDS751525 1284 + 0.303738
NA Tmden_1992 Sel1-like repeatchromosome CDS2073762 702 - 0.350427
NA Tmden_1201 GCN5-related N-acetyltransferasechromosome CDS1267764 429 - 0.307692
NA Tmden_0868 Histidine triad (HIT) proteinchromosome CDS895091 399 - 0.345865
NA Tmden_1424 Hydrogenase expression/synthesis, HypAchromosome CDS1488556 342 - 0.377193
NA Tmden_0598 Nucleotidyl transferasechromosome CDS606021 1047 + 0.321872
NA Tmden_1909 Protein of unknown function UPF0011chromosome CDS1991895 816 - 0.357843
NA Tmden_0949 Protein of unknown function DUF45chromosome CDS991742 660 + 0.266667
NA Tmden_1707 Type I secretion system ATPase, PrtDchromosome CDS1788071 1791 - 0.379676
NA Tmden_2089 conserved hypothetical proteinchromosome CDS2182679 1944 - 0.353909
NA Tmden_0404 conserved hypothetical proteinchromosome CDS400834 1050 + 0.375238
NA Tmden_0400 Protein of unknown function DUF6, transmembranechromosome CDS398227 888 + 0.35473
NA Tmden_1179 Tellurite resistance protein TehBchromosome CDS1237362 555 - 0.345946
NA Tmden_0252 Protein of unknown function DUF178chromosome CDS269104 651 - 0.325653
NA Tmden_1070 ExsBchromosome CDS1133318 675 - 0.354074
NA Tmden_1207 Alpha/beta hydrolase foldchromosome CDS1273241 738 - 0.342818
NA Tmden_1785 Mandelate racemase/muconate lactonizing enzymechromosome CDS1868527 1026 - 0.381092
NA Tmden_1866 Histidinol phosphate phosphatase, HisJchromosome CDS1948146 780 + 0.329487
NA Tmden_1929 Sel1-like repeatchromosome CDS2013408 687 + 0.403202
NA Tmden_0795 Protein of unknown function DUF59chromosome CDS824625 303 + 0.363036
NA Tmden_1295 hypothetical proteinchromosome CDS1367081 429 + 0.307692
NA Tmden_1841 DUF234 DEXX-box ATPasechromosome CDS1924967 942 + 0.352442
NA Tmden_1065 Methionyl-tRNA synthetase, class Iachromosome CDS1127367 1935 + 0.366925
NA Tmden_1505 GCN5-related N-acetyltransferasechromosome CDS1578596 417 - 0.318945
NA Tmden_1550 conserved hypothetical proteinchromosome CDS1622092 828 + 0.358696
NA Tmden_0615 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferasechromosome CDS623084 1608 - 0.340796
NA Tmden_0445 Protein of unknown function DUF164chromosome CDS445332 714 + 0.326331
NA Tmden_1420 O-antigen translocasechromosome CDS1484305 1218 - 0.324302
NA Tmden_1844 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferasechromosome CDS1927296 861 - 0.397213
NA Tmden_1475 conserved hypothetical proteinchromosome CDS1548176 1053 - 0.358025
NA Tmden_0055 Phosphate acetyltransferasechromosome CDS60204 2079 + 0.359307
NA Tmden_0369 Nucleoside diphosphate pyrophosphatasechromosome CDS369361 570 - 0.357895
NA Tmden_1814 TPR repeatchromosome CDS1893539 2367 - 0.31221
NA Tmden_1730 Methyltransferase FkbMchromosome CDS1814695 1029 - 0.365403
NA Tmden_1494 hypothetical proteinchromosome CDS1568963 618 - 0.347896
NA Tmden_1536 Acid phosphatasechromosome CDS1608425 795 - 0.388679
NA Tmden_0136 hypothetical proteinchromosome CDS141403 915 - 0.35847
NA Tmden_1613 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS1692563 747 - 0.39759
NA Tmden_1768 HIT family proteinchromosome CDS1850864 369 + 0.317073
NA Tmden_1198 Sel1-like repeatchromosome CDS1260061 912 + 0.365132
NA Tmden_1537 putative transcriptional regulator, ModE familychromosome CDS1609463 777 + 0.362934
NA Tmden_2049 Twin-arginine translocation pathway signalchromosome CDS2134184 1326 + 0.353695
NA Tmden_1422 Oxidoreductase-likechromosome CDS1486181 969 - 0.343653
NA Tmden_0919 HAD-superfamily hydrolase, subfamily IA, variant 1chromosome CDS955661 630 + 0.350794
NA Tmden_1903 Short-chain dehydrogenase/reductase SDRchromosome CDS1986104 729 - 0.352538
NA Tmden_1651 NUDIX hydrolasechromosome CDS1736452 471 - 0.339703
NA Tmden_0198 Methylase involved in ubiquinone/menaquinone biosynthesis-likechromosome CDS201533 756 - 0.267196
NA Tmden_2084 WD-40 repeatchromosome CDS2175687 2142 + 0.304855
NA Tmden_0846 metal dependent phosphohydrolasechromosome CDS874962 1569 + 0.374761
NA Tmden_0142 putative metal-dependent hydrolasechromosome CDS146975 462 + 0.354978
NA Tmden_0427 conserved hypothetical proteinchromosome CDS429008 663 + 0.340875
NA Tmden_0553 Metallophosphoesterasechromosome CDS558795 1122 - 0.340463
NA Tmden_1268 ABC transporter-related proteinchromosome CDS1336856 1941 + 0.350335
NA Tmden_1872 conserved hypothetical proteinchromosome CDS1953013 960 + 0.345833
NA Tmden_2082 Twin-arginine translocation pathway signalchromosome CDS2173055 1476 + 0.382114
NA Tmden_0815 Plasmid stabilization systemchromosome CDS846381 273 + 0.223443
NA Tmden_0602 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferasechromosome CDS610081 783 + 0.283525
NA Tmden_0177 Radical SAMchromosome CDS180351 1119 - 0.358356
NA Tmden_2056 Beta-lactamase-likechromosome CDS2147928 1023 - 0.344086
NA Tmden_0014 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferasechromosome CDS20848 744 + 0.353495
NA Tmden_1385 hypothetical proteinchromosome CDS1455306 777 + 0.287001
NA Tmden_1853 ATPasechromosome CDS1936261 1284 - 0.312305
NA Tmden_1225 Peptidase M16-likechromosome CDS1293066 1296 + 0.330247
NA Tmden_0095 HAD-superfamily hydrolase subfamily IAchromosome CDS101767 639 + 0.311424
NA Tmden_1219 Short-chain dehydrogenase/reductase SDRchromosome CDS1285859 732 + 0.362022
NA Tmden_2083 Beta-lactamase-likechromosome CDS2174625 972 + 0.333333
NA Tmden_1159 Auxin Efflux Carrierchromosome CDS1214732 900 + 0.383333
NA Tmden_1845 conserved hypothetical proteinchromosome CDS1928169 1077 - 0.337976
NA Tmden_1506 Malate dehydrogenase (acceptor)chromosome CDS1579089 1497 + 0.354041
NA Tmden_1092 Ankyrinchromosome CDS1151682 459 - 0.344227
NA Tmden_0284 conserved hypothetical protein-uncharacterized ATPasechromosome CDS302170 1065 - 0.298592
NA Tmden_0721 2-nitropropane dioxygenase, NPDchromosome CDS742916 1092 + 0.385531
NA Tmden_0143 ABC transporter-related proteinchromosome CDS147440 1836 - 0.369826
NA Tmden_1164 Protein of unknown function DUF81chromosome CDS1221069 741 - 0.340081