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2024-05-01 17:24:30

Gene list

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COG category: General function prediction only
Organism: Treponema pallidum subsp. pallidum str. Nichols, Nichols

Number of genes found: 115

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema pallidum subsp. pallidum str. Nichols, Nichols
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TP0004 T. pallidum predicted coding region TP0004chromosome CDS3827 438 + 0.47032
TP0017 conserved hypothetical proteinchromosome CDS18404 948 + 0.482068
TP0023 sodium-and chloride-dependent transporterchromosome CDS27557 1332 + 0.474474
TP0025 conserved hypothetical proteinchromosome CDS29857 3072 - 0.503906
TP0027 hemolysin, putativechromosome CDS34205 1224 + 0.513889
TP0028 hemolysin, putativechromosome CDS35442 1362 + 0.490455
TP0037 D-specific D-2-hydroxyacid dehydrogenasechromosome CDS44562 996 - 0.51506
TP0038 regulatory protein (pfoS/R)chromosome CDS45654 1053 - 0.54226
TP0050 conserved hypothetical proteinchromosome CDS58819 609 - 0.533662
TP0067 conserved hypothetical proteinchromosome CDS72649 1182 + 0.503384
TP0068 conserved hypothetical proteinchromosome CDS74011 1023 + 0.531769
TP0095 T. pallidum predicted coding region TP0095chromosome CDS103889 1947 + 0.566513
TP0123 T. pallidum predicted coding region TP0123chromosome CDS142987 2571 + 0.488915
TP0156 conserved hypothetical proteinchromosome CDS178285 405 - 0.511111
TP0158 conserved hypothetical proteinchromosome CDS179585 687 - 0.487627
TP0173 T. pallidum predicted coding region TP0173chromosome CDS192132 684 - 0.508772
TP0228 biotin synthase, putativechromosome CDS236642 816 - 0.556373
TP0245 T. pallidum predicted coding region TP0245chromosome CDS254377 3456 + 0.519965
TP0246 T. pallidum predicted coding region TP0246chromosome CDS257978 1794 + 0.464883
TP0268 conserved hypothetical proteinchromosome CDS283919 654 + 0.582569
TP0282 T. pallidum predicted coding region TP0282chromosome CDS297097 720 + 0.594444
TP0285 T. pallidum predicted coding region TP0285chromosome CDS299177 1080 + 0.487963
TP0289 T. pallidum predicted coding region TP0289chromosome CDS302153 1605 + 0.480997
TP0290 conserved hypothetical proteinchromosome CDS303812 834 + 0.464029
TP0298 exported protein (tpn38b)chromosome CDS311131 1032 + 0.54845
TP0300 ribose/galactose ABC transporter, ATP-binding protein (rbsA-1)chromosome CDS312368 1551 + 0.533204
TP0301 conserved hypothetical integral membrane proteinchromosome CDS313915 1134 + 0.507937
TP0302 conserved hypothetical integral membrane proteinchromosome CDS315039 942 + 0.55414
TP0319 membrane lipoprotein (tmpC)chromosome CDS334823 1062 + 0.543315
TP0321 ribose/galactose ABC transporter, ATP-binding protein (rbsA-2)chromosome CDS336125 1602 + 0.568664
TP0322 ribose/galactose ABC transporter, permease protein (rbsC-1)chromosome CDS337636 1203 + 0.553616
TP0323 ribose/galactose ABC transporter, permease protein (rbsC-2)chromosome CDS338835 951 + 0.53102
TP0335 T. pallidum predicted coding region TP0335chromosome CDS357588 543 - 0.578269
TP0336 comE protein, putativechromosome CDS357973 1701 + 0.519106
TP0356 RNA-binding protein, putativechromosome CDS379151 318 + 0.477987
TP0369 T. pallidum predicted coding region TP0369chromosome CDS392771 1551 + 0.590587
TP0374 T. pallidum predicted coding region TP0374chromosome CDS397795 2376 + 0.542929
TP0392 conserved hypothetical proteinchromosome CDS416707 960 + 0.50625
TP0407 phosphoglycolate phosphatase (gph-1)chromosome CDS430960 675 + 0.561481
TP0419 survival protein, putativechromosome CDS446931 564 + 0.585106
TP0434 T. pallidum predicted coding region TP0434chromosome CDS461245 684 + 0.597953
TP0436 conserved hypothetical proteinchromosome CDS462626 1083 - 0.590951
TP0445 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (thiJ)chromosome CDS471477 630 + 0.595238
TP0447 T. pallidum predicted coding region TP0447chromosome CDS473359 1125 + 0.505778
TP0449 T. pallidum predicted coding region TP0449chromosome CDS475627 591 + 0.441624
TP0460 T. pallidum predicted coding region TP0460chromosome CDS489768 708 + 0.590395
TP0464 conserved hypothetical proteinchromosome CDS492278 753 - 0.616202
TP0468 conserved hypothetical proteinchromosome CDS495210 531 - 0.568738
TP0469 conserved hypothetical proteinchromosome CDS495698 1464 - 0.576503
TP0470 conserved hypothetical proteinchromosome CDS497154 1110 - 0.625225
TP0489 conserved hypothetical proteinchromosome CDS523859 969 + 0.485036
TP0491 conserved hypothetical proteinchromosome CDS525019 1035 + 0.520773
TP0494 conserved hypothetical proteinchromosome CDS529736 822 + 0.520681
TP0496 conserved hypothetical proteinchromosome CDS530887 990 + 0.533333
TP0502 T. pallidum predicted coding region TP0502chromosome CDS537493 897 + 0.506132
TP0516 virulence factor (mviN)chromosome CDS556327 1581 - 0.418722
TP0522 T. pallidum predicted coding region TP0522chromosome CDS563018 480 - 0.45625
TP0541 GTP-binding protein (era)chromosome CDS582189 960 + 0.551042
TP0544 T. pallidum predicted coding region TP0544chromosome CDS585651 1869 - 0.509363
TP0550 thiophene and furan oxidation protein (thdF)chromosome CDS595566 1488 - 0.561828
TP0553 conserved hypothetical integral membrane proteinchromosome CDS598935 1212 + 0.476898
TP0554 phosphoglycolate phosphatase (gph-2)chromosome CDS600181 669 + 0.54559
TP0557 conserved hypothetical proteinchromosome CDS603423 714 + 0.518207
TP0558 conserved hypothetical integral membrane proteinchromosome CDS604166 909 + 0.564356
TP0561 conserved hypothetical proteinchromosome CDS608490 852 - 0.593897
TP0567 conserved hypothetical proteinchromosome CDS615717 621 - 0.502415
TP0598 T. pallidum predicted coding region TP0598chromosome CDS649054 1818 - 0.510451
TP0622 T. pallidum predicted coding region TP0622chromosome CDS675281 1782 - 0.553872
TP0648 conserved hypothetical proteinchromosome CDS709859 2049 - 0.506101
TP0649 hemolysin (tlyC)chromosome CDS711852 798 - 0.473684
TP0650 conserved hypothetical proteinchromosome CDS712637 483 - 0.496894
TP0651 conserved hypothetical integral membrane proteinchromosome CDS713125 2412 - 0.521973
TP0679 T. pallidum predicted coding region TP0679chromosome CDS743551 318 + 0.528302
TP0689 GTP-binding proteinchromosome CDS755951 1383 - 0.438178
TP0731 conserved hypothetical proteinchromosome CDS796674 711 + 0.589311
TP0735 glutamate synthase (gltA)chromosome CDS799867 1557 - 0.55106
TP0742 GTP-binding protein (obg)chromosome CDS806765 1131 - 0.577365
TP0750 hypothetical proteinchromosome CDS815113 672 + 0.522321
TP0776 conserved hypothetical proteinchromosome CDS843604 777 - 0.572716
TP0778 mazG protein (mazG)chromosome CDS844726 912 - 0.539474
TP0780 NH(3)-dependent NAD(+) synthetase (nadE)chromosome CDS846325 2040 - 0.553922
TP0786 ABC transporter, ATP-binding protein, putativechromosome CDS852093 714 + 0.522409
TP0790 antibiotic transport protein, putativechromosome CDS855052 2667 - 0.502812
TP0803 T. pallidum predicted coding region TP0803chromosome CDS871182 1209 + 0.493797
TP0815 T. pallidum predicted coding region TP0815chromosome CDS883732 984 + 0.521341
TP0819 conserved hypothetical proteinchromosome CDS887064 933 - 0.512326
TP0820 hypothetical proteinchromosome CDS888024 771 - 0.557717
TP0832 T. pallidum predicted coding region TP0832chromosome CDS899271 816 - 0.558824
TP0835 ankyrin, putativechromosome CDS902269 2805 - 0.53369
TP0838 ABC transporter, ATP-binding proteinchromosome CDS908013 1665 - 0.465465
TP0840 conserved hypothetical integral membrane proteinchromosome CDS910864 2250 + 0.497778
TP0855 T. pallidum predicted coding region TP0855chromosome CDS929582 3384 - 0.562648
TP0875 conserved hypothetical proteinchromosome CDS952536 408 + 0.568627
TP0880 membrane spanning protein, putativechromosome CDS957204 726 - 0.421488
TP0883 conserved hypothetical integral membrane proteinchromosome CDS960272 1098 - 0.378871
TP0884 conserved hypothetical integral membrane proteinchromosome CDS961387 1089 - 0.450872
TP0902 carboxylesterase (est)chromosome CDS983997 882 - 0.557823
TP0906 conserved hypothetical proteinchromosome CDS987065 243 + 0.555556
TP0915 conserved hypothetical proteinchromosome CDS992507 1335 + 0.498127
TP0920 T. pallidum predicted coding region TP0920chromosome CDS996713 2430 + 0.545679
TP0921 NADH oxidasechromosome CDS999250 1338 + 0.494021
TP0936 hemolysin, putativechromosome CDS1017604 1074 - 0.522346
TP0937 conserved hypothetical proteinchromosome CDS1018849 636 - 0.536164
TP0944 conserved hypothetical proteinchromosome CDS1025685 1173 - 0.531969
TP0948 spoIIIJ-associated protein (jag)chromosome CDS1029193 696 - 0.514368
TP0952 lipase, putativechromosome CDS1032740 1038 - 0.490366
TP0954 conserved hypothetical proteinchromosome CDS1035136 1437 - 0.533751
TP0975 conserved hypothetical proteinchromosome CDS1058383 825 - 0.593939
TP0982 glpG protein, putativechromosome CDS1065283 627 + 0.4689
TP0986 conserved hypothetical integral membrane proteinchromosome CDS1070566 885 + 0.532203
TP0990 conserved hypothetical proteinchromosome CDS1073524 3102 + 0.527724
TP1018 conserved hypothetical proteinchromosome CDS1109926 1515 + 0.530033
TP1023 recX protein (recX)chromosome CDS1116458 495 - 0.545455
TP1033 conserved hypothetical proteinchromosome CDS1126412 936 - 0.617521
TP1037 hemolysin III (hlyIII)chromosome CDS1133934 717 - 0.495119