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2024-05-06 13:01:31

Gene list

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COG category: General function prediction only
Organism: Streptococcus pneumoniae TIGR4, TIGR4; ATCC BAA-334

Number of genes found: 230

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Streptococcus pneumoniae TIGR4, TIGR4; ATCC BAA-334
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SP_0777 hypothetical proteinchromosome CDS732894 801 + 0.344569
NA SP_0636 ABC transporter, ATP-binding proteinchromosome CDS600065 993 + 0.437059
NA SP_1742 conserved hypothetical proteinchromosome CDS1645795 1098 - 0.45082
NA SP_1090 conserved hypothetical proteinchromosome CDS1026283 642 - 0.422118
NA SP_0873 membrane proteinchromosome CDS820286 1110 + 0.331532
NA SP_1944 conserved hypothetical protein TIGR00150chromosome CDS1847507 444 - 0.398649
NA SP_1069 conserved hypothetical proteinchromosome CDS1005606 1035 + 0.392271
NA SP_1879 conserved hypothetical proteinchromosome CDS1781908 522 - 0.469349
NA SP_0805 hydrolase, haloacid dehalogenase-like familychromosome CDS759901 573 + 0.376963
NA SP_2125 conserved hypothetical proteinchromosome CDS2036217 342 + 0.432749
NA SP_2230 ABC transporter, ATP-binding proteinchromosome CDS2148833 1623 + 0.386938
NA SP_0405 conserved hypothetical proteinchromosome CDS384342 549 + 0.42623
NA SP_0845 lipoproteinchromosome CDS791420 1053 + 0.418803
NA SP_0675 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS650006 756 + 0.424603
NA SP_0521 HIT family proteinchromosome CDS502190 411 - 0.428224
NA SP_1566 conserved hypothetical proteinchromosome CDS1474054 891 - 0.443322
NA SP_1878 CBS domain proteinchromosome CDS1781450 462 - 0.452381
NA SP_1972 membrane proteinchromosome CDS1878056 708 - 0.427966
NA SP_1963 CBS domain proteinchromosome CDS1870650 1332 - 0.401652
NA SP_0847 putative sugar ABC transporter, permease proteinchromosome CDS794144 1059 + 0.446648
NA SP_1536 conserved hypothetical proteinchromosome CDS1445737 750 - 0.416
NA SP_1951 conserved hypothetical proteinchromosome CDS1854242 705 + 0.310638
NA SP_2055 alcohol dehydrogenase, zinc-containingchromosome CDS1955168 1059 - 0.409821
NA SP_0168 putative macrolide efflux proteinchromosome CDS163632 1179 + 0.273961
NA SP_0144 hypothetical proteinchromosome CDS141932 666 + 0.373874
NA SP_0160 conserved domain proteinchromosome CDS157864 459 - 0.45098
NA SP_2096 peptidase, M20/M25/M40 familychromosome CDS2003599 1131 - 0.47038
NA SP_1290 conserved hypothetical proteinchromosome CDS1224435 1305 + 0.446743
NA SP_0638 conserved hypothetical proteinchromosome CDS601879 786 + 0.39313
NA SP_0547 conserved domain proteinchromosome CDS518517 612 + 0.375817
NA SP_1855 alcohol dehydrogenase, zinc-containingchromosome CDS1762944 1038 - 0.450867
NA SP_1478 oxidoreductase, aldo/keto reductase familychromosome CDS1391145 843 - 0.42586
NA SP_1995 conserved hypothetical proteinchromosome CDS1898183 411 - 0.345499
NA SP_0204 acetyltransferase, GNAT familychromosome CDS191073 507 + 0.435897
NA SP_0925 conserved hypothetical proteinchromosome CDS879029 672 + 0.364583
NA SP_1686 oxidoreductase, Gfo/Idh/MocA familychromosome CDS1586028 1104 - 0.393116
NA SP_0628 HIT family proteinchromosome CDS595264 504 + 0.420635
NA SP_1061 putative protein kinasechromosome CDS996190 1347 + 0.27023
NA SP_1236 acetyltransferase, GNAT familychromosome CDS1167286 489 - 0.347648
NA SP_0256 acetyltransferase, GNAT familychromosome CDS228155 417 + 0.395683
NA SP_1538 Cof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS1446901 1401 - 0.415418
NA SP_1601 conserved hypothetical proteinchromosome CDS1504894 630 - 0.380952
NA SP_1578 putative methyltransferasechromosome CDS1483876 759 - 0.364954
NA SP_0286 Cof family proteinchromosome CDS264266 813 - 0.405904
NA SP_1116 putative transporterchromosome CDS1045647 1179 + 0.375742
NA SP_0770 ABC transporter, ATP-binding proteinchromosome CDS728243 1542 + 0.440986
NA SP_1529 putative polysaccharide biosynthesis proteinchromosome CDS1439697 1590 - 0.439623
NA SP_1155 GTP-binding proteinchromosome CDS1090342 852 + 0.420188
NA SP_1282 ABC transporter, ATP-binding proteinchromosome CDS1216328 1560 + 0.4
NA SP_0741 conserved hypothetical proteinchromosome CDS702743 1176 - 0.42602
NA SP_1346 putative membrane proteinchromosome CDS1270738 588 - 0.341837
NA SP_0570 conserved domain proteinchromosome CDS535552 1605 + 0.285981
NA SP_2094 conserved hypothetical proteinchromosome CDS2002387 678 - 0.429204
NA SP_1325 oxidoreductase, Gfo/Idh/MocA familychromosome CDS1248260 1140 - 0.379825
NA SP_1410 conserved hypothetical proteinchromosome CDS1330816 390 - 0.384615
NA SP_1612 conserved domain proteinchromosome CDS1512877 993 + 0.29708
NA SP_0356 putative polysaccharide transporterchromosome CDS330528 1242 + 0.297907
NA SP_1590 conserved hypothetical proteinchromosome CDS1495716 783 + 0.44189
NA SP_1291 Cof family proteinchromosome CDS1225752 807 + 0.442379
NA SP_0882 conserved hypothetical proteinchromosome CDS831804 825 + 0.42303
NA SP_2072 glutamine amidotransferase, class-Ichromosome CDS1979730 729 - 0.423868
NA SP_1447 membrane proteinchromosome CDS1367179 897 - 0.426979
NA SP_1114 ABC transporter, ATP-binding proteinchromosome CDS1042800 1902 + 0.421136
NA SP_1634 hypothetical proteinchromosome CDS1534348 1074 + 0.426443
NA SP_0846 sugar ABC transporter, ATP-binding proteinchromosome CDS792616 1536 + 0.417969
NA SP_1516 acetyltransferase, GNAT familychromosome CDS1423902 429 - 0.365967
NA SP_1519 acetyltransferase, GNAT familychromosome CDS1427097 495 - 0.420202
NA SP_0104 hydrolase, haloacid dehalogenase-like familychromosome CDS106956 633 - 0.4297
NA SP_2122 conserved hypothetical proteinchromosome CDS2033805 1248 - 0.383814
NA SP_0768 conserved hypothetical proteinchromosome CDS726674 1086 + 0.424494
NA SP_0095 conserved hypothetical proteinchromosome CDS96870 987 + 0.440729
NA SP_0143 conserved domain proteinchromosome CDS141243 678 + 0.358407
NA SP_0128 putative ribosomal-protein-alanine acetyltransferasechromosome CDS128980 438 + 0.456621
NA SP_0667 putative pneumococcal surface proteinchromosome CDS642951 999 + 0.379379
NA SP_0055 hypothetical proteinchromosome CDS57981 228 + 0.355263
NA SP_0938 tetrapyrrole methylase family proteinchromosome CDS889355 870 + 0.435632
NA SP_1504 TPR domain proteinchromosome CDS1412458 1212 - 0.405941
NA SP_1739 KH domain proteinchromosome CDS1643241 1605 - 0.446106
NA SP_0922 carbon-nitrogen hydrolase family proteinchromosome CDS876617 876 + 0.432648
NA SP_0783 conserved hypothetical proteinchromosome CDS736172 537 - 0.446927
NA SP_0989 MutT/nudix family proteinchromosome CDS933648 546 + 0.412088
NA SP_1235 MutT/nudix family proteinchromosome CDS1166750 468 - 0.433761
NA SP_1749 GTP-binding proteinchromosome CDS1650417 1107 - 0.442638
NA SP_1424 hypothetical proteinchromosome CDS1344357 402 - 0.271144
NA SP_1910 conserved hypothetical proteinchromosome CDS1823716 627 - 0.443381
NA SP_0804 putative 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis proteinchromosome CDS759271 555 + 0.434234
NA SP_0181 conserved hypothetical proteinchromosome CDS173006 678 + 0.365782
NA SP_1071 ABC transporter, ATP-binding proteinchromosome CDS1007572 759 + 0.387352
NA SP_0640 hypothetical proteinchromosome CDS602918 246 + 0.353659
NA SP_0288 conserved hypothetical proteinchromosome CDS266754 693 + 0.38961
NA SP_0817 MutT/nudix family proteinchromosome CDS768665 423 - 0.394799
NA SP_1280 conserved hypothetical proteinchromosome CDS1215060 543 - 0.384899
NA SP_1553 ABC transporter, ATP-binding proteinchromosome CDS1462632 1872 - 0.433761
NA SP_1783 MutT/nudix family proteinchromosome CDS1701406 429 - 0.410256
NA SP_1089 glutamine amidotransferase, class Ichromosome CDS1025576 690 - 0.417391
NA SP_1943 acetyltransferase, GNAT familychromosome CDS1846999 519 - 0.414258
NA SP_0033 conserved hypothetical proteinchromosome CDS34253 438 + 0.445205
NA SP_1743 conserved hypothetical proteinchromosome CDS1646902 747 - 0.447122
NA SP_0073 conserved hypothetical proteinchromosome CDS79687 855 + 0.447953
NA SP_0754 putative acetoin utilization protein AcuBchromosome CDS712939 657 + 0.377473
NA SP_0980 O-methyltransferasechromosome CDS926335 714 + 0.410364
NA SP_0354 putative membrane proteinchromosome CDS328056 1401 + 0.310493
NA SP_1272 putative polysaccharide biosynthesis proteinchromosome CDS1204753 1488 + 0.366263
NA SP_1240 conserved hypothetical proteinchromosome CDS1170378 954 - 0.392034
NA SP_1422 hypothetical proteinchromosome CDS1343206 489 - 0.349693
NA SP_0121 metallo-beta-lactamase superfamily proteinchromosome CDS125051 1680 - 0.46369
NA SP_0153 putative membrane proteinchromosome CDS150602 570 - 0.442105
NA SP_0298 conserved hypothetical proteinchromosome CDS273953 1209 - 0.333333
NA SP_0955 DNA internalization-related competence protein ComEC/Rec2chromosome CDS902616 2241 + 0.413655
NA SP_0848 putative sugar ABC transporter, permease proteinchromosome CDS795205 957 + 0.428422
NA SP_1471 putative oxidoreductasechromosome CDS1384186 606 + 0.384488
NA SP_1378 conserved hypothetical proteinchromosome CDS1300390 1173 - 0.409207
NA SP_0580 acetyltransferase, GNAT familychromosome CDS548815 510 + 0.372549
NA SP_0443 conserved hypothetical proteinchromosome CDS415582 1668 + 0.434652
NA SP_1451 Cof family proteinchromosome CDS1370462 828 - 0.439614
NA SP_0793 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS746713 699 + 0.450644
NA SP_0431 conserved domain proteinchromosome CDS405745 237 + 0.303797
NA SP_1045 conserved hypothetical protein TIGR00147chromosome CDS984090 885 + 0.369492
NA SP_0794 MutT/nudix family proteinchromosome CDS747422 501 + 0.393214
NA SP_1610 SAM-dependent methyltransferasechromosome CDS1511651 678 - 0.442478
NA SP_2098 membrane proteinchromosome CDS2005725 912 - 0.403509
NA SP_0666 conserved hypothetical proteinchromosome CDS642284 618 + 0.389968
NA SP_1298 DHH subfamily 1 proteinchromosome CDS1229969 936 + 0.442308
NA SP_1466 hemolysinchromosome CDS1379253 648 + 0.412037
NA SP_1568 GTP-binding proteinchromosome CDS1475387 588 - 0.438776
NA SP_0737 sodium-dependent transporterchromosome CDS699905 1272 - 0.431604
NA SP_0776 KH domain proteinchromosome CDS732090 240 + 0.3625
NA SP_1777 conserved hypothetical proteinchromosome CDS1695201 465 + 0.455914
NA SP_0119 MutT/nudix family proteinchromosome CDS122320 456 + 0.445175
NA SP_2031 conserved hypothetical proteinchromosome CDS1937118 1092 - 0.407509
NA SP_0652 conserved hypothetical proteinchromosome CDS624848 558 + 0.435484
NA SP_1234 transcriptional regulator, biotin repressor familychromosome CDS1166238 516 + 0.385659
NA SP_0590 acetyltransferase, GNAT familychromosome CDS560821 885 + 0.39774
NA SP_1023 acetyltransferase, GNAT familychromosome CDS965958 432 + 0.395833
NA SP_0613 metallo-beta-lactamase superfamily proteinchromosome CDS579849 1662 + 0.435018
NA SP_1074 conserved hypothetical proteinchromosome CDS1011306 330 + 0.415152
NA SP_0550 conserved hypothetical proteinchromosome CDS520080 636 + 0.422956
NA SP_0674 metallo-beta-lactamase superfamily proteinchromosome CDS649056 930 + 0.452688
NA SP_0740 MutT/nudix family proteinchromosome CDS702268 456 - 0.407895
NA SP_1709 phosphoglycerate dehydrogenase-related proteinchromosome CDS1612751 1311 - 0.430969
NA SP_1750 conserved hypothetical proteinchromosome CDS1651526 528 - 0.4375
NA SP_1600 putative membrane proteinchromosome CDS1503503 1152 - 0.432292
NA SP_1717 ABC transporter, ATP-binding proteinchromosome CDS1620921 894 - 0.417226
NA SP_0074 acetyltransferase, CysE/LacA/LpxA/NodL familychromosome CDS80647 558 + 0.462366
NA SP_0889 hypothetical proteinchromosome CDS837995 414 + 0.318841
NA SP_1520 acetyltransferase, GNAT familychromosome CDS1427588 465 - 0.415054
NA SP_2224 peptidase, M16 familychromosome CDS2141764 1284 - 0.345794
NA SP_2207 putative competence protein ComFchromosome CDS2127745 663 - 0.361991
NA SP_0967 conserved hypothetical protein TIGR00043chromosome CDS914849 498 + 0.409639
NA SP_1627 conserved hypothetical proteinchromosome CDS1528678 630 - 0.363492
NA SP_1171 hydrolase, haloacid dehalogenase-like familychromosome CDS1106289 714 - 0.414566
NA SP_1328 sodium:solute symporter family proteinchromosome CDS1252110 1542 - 0.358625
NA SP_1587 oxalate:formate antiporterchromosome CDS1491539 1227 - 0.406683
NA SP_1592 conserved domain proteinchromosome CDS1497699 204 + 0.348039
NA SP_0791 oxidoreductase, aldo/keto reductase familychromosome CDS745462 927 + 0.36246
NA SP_2064 hydrolase, haloacid dehalogenase-like familychromosome CDS1964912 621 - 0.4219
NA SP_2225 conserved hypothetical proteinchromosome CDS2143044 1251 - 0.342126
NA SP_1902 conserved hypothetical proteinchromosome CDS1816838 777 + 0.356499
NA SP_0760 hypothetical proteinchromosome CDS719074 687 + 0.429403
NA SP_1070 conserved hypothetical proteinchromosome CDS1006709 867 + 0.427912
NA SP_1270 alcohol dehydrogenase, zinc-containingchromosome CDS1202683 1023 - 0.40176
NA SP_2178 conserved hypothetical protein, interruptionchromosome CDS2095201 309 - 0.307443
NA SP_1246 Cof family proteinchromosome CDS1178199 795 - 0.401258
NA SP_1344 conserved hypothetical proteinchromosome CDS1267611 2610 - 0.326437
NA SP_1482 oxidoreductase, Gfo/Idh/MocA familychromosome CDS1394319 978 + 0.419223
NA SP_1909 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1822913 762 - 0.439633
NA SP_1356 amidohydrolase family proteinchromosome CDS1275807 1260 - 0.431746
NA SP_1411 conserved hypothetical proteinchromosome CDS1331221 384 - 0.401042
NA SP_0905 conserved hypothetical proteinchromosome CDS858123 906 - 0.415011
NA SP_1646 metallo-beta-lactamase superfamily proteinchromosome CDS1544932 630 + 0.479365
NA SP_0157 hypothetical proteinchromosome CDS154870 582 + 0.38488
NA SP_1332 conserved domain proteinchromosome CDS1256535 588 - 0.338435
NA SP_0637 membrane proteinchromosome CDS601059 819 + 0.410256
NA SP_0145 conserved hypothetical proteinchromosome CDS142669 1227 + 0.379788
NA SP_0430 hypothetical proteinchromosome CDS405214 519 + 0.34104
NA SP_2116 conserved domain proteinchromosome CDS2029891 642 - 0.397196
NA SP_0285 alcohol dehydrogenase, zinc-containingchromosome CDS262907 1020 - 0.458824
NA SP_0320 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS294162 816 - 0.439951
NA SP_1079 GTP-binding protein, GTP1/Obg familychromosome CDS1014604 1305 + 0.440613
NA SP_0950 acetyltransferase, GNAT familychromosome CDS898939 501 + 0.373253
NA SP_1941 competence/damage-inducible protein CinAchromosome CDS1844634 1257 - 0.450278
NA SP_2040 putative jag proteinchromosome CDS1945556 987 - 0.395137
NA SP_0332 hypothetical proteinchromosome CDS304679 543 - 0.399632
NA SP_0379 conserved hypothetical proteinchromosome CDS358103 1233 - 0.425791
NA SP_1546 conserved domain proteinchromosome CDS1453424 630 + 0.428571
NA SP_1245 Cof family proteinchromosome CDS1177381 819 - 0.423687
NA SP_1464 acetyltransferase, GNAT familychromosome CDS1378181 495 - 0.424242
NA SP_0287 xanthine/uracil permease family proteinchromosome CDS265214 1473 + 0.40869
NA SP_0404 hypothetical proteinchromosome CDS384034 312 + 0.391026
NA SP_1019 acetyltransferase, GNAT familychromosome CDS962963 480 + 0.304167
NA SP_0565 conserved domain proteinchromosome CDS531038 450 + 0.426667
NA SP_1505 membrane proteinchromosome CDS1413677 1167 - 0.38389
NA SP_1518 conserved hypothetical proteinchromosome CDS1425361 1656 - 0.411836
NA SP_0738 hypothetical proteinchromosome CDS701173 228 - 0.377193
NA SP_1997 Cof family proteinchromosome CDS1899242 1389 - 0.434125
NA SP_0923 Cof family proteinchromosome CDS877673 810 - 0.432099
blpY SP_0545 immunity protein BlpYchromosome CDS517402 690 + 0.378261
cbf1 SP_1980 cmp-binding-factor 1chromosome CDS1884257 927 - 0.447681
cbpA SP_2190 choline binding protein Achromosome CDS2110015 2082 - 0.418348
cbpC SP_0377 choline binding protein Cchromosome CDS355947 1023 + 0.357771
cbpD SP_2201 choline binding protein Dchromosome CDS2121460 1347 - 0.391982
cbpE SP_0930 choline binding protein Echromosome CDS882188 1884 + 0.374735
cbpF SP_0391 choline binding protein Fchromosome CDS369611 1023 + 0.402737
cbpI SP_0069 choline binding protein Ichromosome CDS72674 636 + 0.421384
cbpJ SP_0378 choline binding protein Jchromosome CDS356987 999 + 0.405405
coiA SP_0978 competence protein CoiAchromosome CDS923559 954 + 0.388889
era SP_0969 GTP-binding protein Erachromosome CDS915739 900 + 0.442222
estA SP_0614 tributyrin esterasechromosome CDS581579 780 + 0.434615
fabG SP_0421 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS398956 732 + 0.422131
fabK SP_0419 enoyl-(acyl-carrier-protein) reductasechromosome CDS397035 975 + 0.433846
guaB SP_2228 inosine-5'-monophosphate dehydrogenasechromosome CDS2145972 1479 - 0.412441
hflX SP_0672 GTP-binding protein HflXchromosome CDS647187 1239 + 0.448749
licB SP_1268 licB proteinchromosome CDS1200929 879 - 0.397042
lytB SP_0965 endo-beta-N-acetylglucosaminidasechromosome CDS911052 1977 + 0.385938
metG SP_0788 methionyl-tRNA synthetasechromosome CDS741785 1998 + 0.422923
mutX SP_1168 mutator MutT proteinchromosome CDS1104364 465 - 0.447312
nox SP_1469 NADH oxidasechromosome CDS1381530 1380 - 0.407246
pcpA SP_2136 choline binding protein PcpAchromosome CDS2046656 1866 - 0.322615
pepX SP_0894 X-pro dipeptidyl-peptidasechromosome CDS844468 2274 - 0.412929
pheT SP_0581 phenylalanyl-tRNA synthetase, beta subunitchromosome CDS549401 2406 + 0.458437
pmrA SP_0972 multi-drug resistance efflux pumpchromosome CDS918103 1200 + 0.431667
pspA SP_0117 pneumococcal surface protein Achromosome CDS118423 2235 + 0.40179
recU SP_0370 recombination protein Uchromosome CDS349009 597 - 0.375209
rrmA SP_2103 rRNA (guanine-N1-)-methyltransferasechromosome CDS2013137 849 + 0.415783
rsgA SP_1984 ribosome small subunit-dependent GTPase Achromosome CDS1887738 879 - 0.435722
tehB SP_0977 tellurite resistance protein TehBchromosome CDS922626 861 + 0.420441
thdF SP_1016 thiophene and furan oxidation protein ThdFchromosome CDS960558 1374 - 0.443231
vicX SP_1225 vicX proteinchromosome CDS1157302 810 - 0.423457
xylH SP_1017 4-oxalocrotonate tautomerasechromosome CDS962068 183 - 0.464481
ylmE SP_1665 ylmE proteinchromosome CDS1564776 672 - 0.391369