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2024-05-05 21:38:40

Gene list

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COG category: General function prediction only
Organism: Fusobacterium nucleatum subsp. nucleatum ATCC 25586, ATCC 25586

Number of genes found: 247

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Fusobacterium nucleatum subsp. nucleatum ATCC 25586, ATCC 25586
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
FN0005 Jag proteinchromosome CDS644148 492 + 0.245935
FN0006 Thiophene and furan oxidation protein THDFchromosome CDS644645 1368 + 0.269737
FN0011 Transcriptional regulatorchromosome CDS651171 510 + 0.272549
FN0013 Transporterchromosome CDS652358 342 + 0.236842
FN0014 Transporterchromosome CDS652705 195 + 0.246154
FN0030 5-nitroimidazole antibiotic resistance proteinchromosome CDS667260 477 + 0.268344
FN0032 Hypothetical proteinchromosome CDS668879 990 - 0.240404
FN0055 Ribosomal-protein-alanine acetyltransferasechromosome CDS692298 507 + 0.266272
FN0104 Acetyltransferasechromosome CDS739708 279 - 0.25448
FN0107 Sodium/proline symporterchromosome CDS741852 1449 + 0.298827
FN0123 ATPasechromosome CDS753723 1365 + 0.222711
FN0145 Hypothetical proteinchromosome CDS774446 489 + 0.200409
FN0158 DNA-binding proteinchromosome CDS786389 1050 + 0.28381
FN0170 GTP-binding proteinchromosome CDS795351 1323 + 0.300076
FN0174 Enoyl-[acyl-carrier-protein] reductasechromosome CDS799567 957 + 0.329154
FN0178 UNC-44 ankyrinschromosome CDS802480 981 - 0.300714
FN0179 Ankyrin repeat proteinschromosome CDS803477 1404 - 0.286325
FN0180 Tetratricopeptide repeat family proteinchromosome CDS804936 477 - 0.232704
FN0182 Sarcosine oxidase alpha subunitchromosome CDS805891 1266 - 0.311216
FN0183 Glycerol-3-phosphate dehydrogenasechromosome CDS807168 1497 - 0.309953
FN0195 Dipeptide transport ATP-binding protein dppDchromosome CDS820698 1770 + 0.277966
FN0197 Methyltransferasechromosome CDS822804 801 + 0.247191
FN0213 N-acylneuraminate-9-phosphatasechromosome CDS838242 507 - 0.287968
FN0216 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS840202 753 - 0.269588
FN0218 Anthranilate synthase component IIchromosome CDS841792 870 + 0.296552
FN0223 COME operon protein 3chromosome CDS848580 1137 + 0.210202
FN0230 Hypothetical proteinchromosome CDS856609 699 - 0.240343
FN0270 GTP-binding protein erachromosome CDS896910 891 + 0.271605
FN0285 RNA binding proteinchromosome CDS914022 240 - 0.279167
FN0314 Caffeoyl-CoA O-methyltransferasechromosome CDS951344 648 + 0.234568
FN0320 Hypothetical cytosolic proteinchromosome CDS957080 543 + 0.28361
FN0341 transport proteinchromosome CDS974143 1329 - 0.319789
FN0345 Permeasechromosome CDS977851 996 - 0.222892
FN0354 Hypothetical membrane-spanning proteinchromosome CDS985432 675 + 0.268148
FN0369 Ribosomal-protein-alanine acetyltransferasechromosome CDS998554 432 - 0.203704
FN0391 Hydrolase (HAD superfamily)chromosome CDS1028753 804 + 0.257463
FN0395 Transporterchromosome CDS1033246 861 + 0.267131
FN0428 Histidinol-phosphatasechromosome CDS1070177 777 + 0.207207
FN0439 Lactam utilization protein LAMBchromosome CDS1080927 774 - 0.330749
FN0465 Hypothetical proteinchromosome CDS1110186 1233 + 0.279805
FN0467 murein hydrolase exporterchromosome CDS1113004 357 + 0.235294
FN0487 2-hydroxyglutarate dehydrogenasechromosome CDS1131846 1017 - 0.297935
FN0494 Short chain dehydrogenasechromosome CDS1138917 732 + 0.338798
FN0505 Anthranilate synthase component IIchromosome CDS1155134 732 - 0.296448
FN0508 Serine proteasechromosome CDS1157897 846 - 0.250591
FN0511 D-lactate dehydrogenasechromosome CDS1160425 1008 + 0.275794
FN0526 Florfenicol resistance proteinchromosome CDS1181991 1077 - 0.259053
FN0527 Alanyl-tRNA synthetasechromosome CDS1183067 1122 - 0.236185
FN0532 Hypothetical membrane-spanning proteinchromosome CDS1186614 1056 - 0.283144
FN0535 Hypothetical proteinchromosome CDS1189491 579 + 0.309154
FN0545 Lipopolysaccharide core biosynthesis protein rfaYchromosome CDS1198181 597 + 0.227806
FN0548 Regulatory protein recXchromosome CDS1201077 393 + 0.262087
FN0561 Proline synthetase associated proteinchromosome CDS1214295 672 + 0.24256
FN0570 unknownchromosome CDS1221052 492 + 0.189024
FN0576 hypothetical proteinchromosome CDS1226253 1110 + 0.296396
FN0579 Hypothetical cytosolic proteinchromosome CDS1229943 4836 + 0.270885
FN0590 N-acyl-L-amino acid amidohydrolasechromosome CDS1242946 1182 - 0.314721
FN0623 Malonate transporterchromosome CDS1282092 957 + 0.263323
FN0640 Transporterchromosome CDS1297529 882 - 0.226757
FN0641 Methyltransferasechromosome CDS1298433 636 - 0.215409
FN0648 Exoenzymes regulatory protein aepA precursorchromosome CDS1304622 1530 - 0.269935
FN0649 Exoenzymes regulatory protein aepA precursorchromosome CDS1306179 1629 - 0.285451
FN0657 Acetyltransferasechromosome CDS1314406 522 + 0.273946
FN0664 2-nitropropane dioxygenasechromosome CDS1319898 1149 + 0.310705
FN0672 ATPasechromosome CDS1327786 1317 + 0.251329
FN0674 Transporterchromosome CDS1329613 849 + 0.234393
FN0679 GTPasechromosome CDS1334736 858 + 0.24359
FN0695 ABC transporter ATP-binding proteinchromosome CDS1353026 726 + 0.305785
FN0701 Methyltransferasechromosome CDS1359401 1554 + 0.241313
FN0703 N-acyl-L-amino acid amidohydrolasechromosome CDS1361158 657 - 0.327245
FN0709 Virulence factor mviNchromosome CDS1367479 1470 + 0.242177
FN0722 WD-repeat family proteinchromosome CDS1378608 3057 + 0.263657
FN0731 Hypothetical proteinchromosome CDS1387860 534 + 0.258427
FN0732 Hypothetical proteinchromosome CDS1388410 1191 + 0.233417
FN0736 Methyltransferasechromosome CDS1394748 756 - 0.255291
FN0745 metal dependent phosphohydrolasechromosome CDS1403415 1890 + 0.258201
FN0746 Hypothetical Metal-Binding Proteinchromosome CDS1405321 489 + 0.251534
FN0747 Phosphohydrolase (MUTT/NUDIX family protein)chromosome CDS1405829 516 - 0.251938
FN0752 Proline iminopeptidasechromosome CDS1410811 960 - 0.282292
FN0778 Methyltransferasechromosome CDS1434939 1239 - 0.199354
FN0779 Putative GTPases (G3E family)chromosome CDS1436186 885 - 0.237288
FN0782 Methyltransferasechromosome CDS1438371 732 - 0.202186
FN0795 CBS domain containing proteinchromosome CDS1452540 597 + 0.252931
FN0819 Tetratricopeptide repeat family proteinchromosome CDS1477388 1998 + 0.261762
FN0823 GTP-binding protein hflXchromosome CDS1482507 1803 + 0.260677
FN0834 Hypothetical Exported Proteinchromosome CDS1496613 1536 + 0.245443
FN0847 TPR-repeat-containing proteinschromosome CDS1505393 1800 + 0.256667
FN0851 Biotin synthesis protein bioCchromosome CDS1509660 669 + 0.227205
FN0852 Hydrolasechromosome CDS1510364 600 + 0.236667
FN0866 Integral membrane proteinchromosome CDS1523931 675 - 0.241481
FN0869 Hydrolase (HAD superfamily)chromosome CDS1528198 813 - 0.247232
FN0874 Phosphohydrolase (MUTT/NUDIX family protein)chromosome CDS1534462 516 - 0.275194
FN0877 Sodium/proline symporterchromosome CDS1537593 1371 - 0.307805
FN0879 ABC transporter integral membrane proteinchromosome CDS1540251 786 - 0.221374
FN0880 ABC transporter ATP-binding proteinchromosome CDS1541052 1017 - 0.243854
FN0881 ABC transporter integral membrane proteinchromosome CDS1542049 789 - 0.245881
FN0889 hypothetical proteinchromosome CDS1551100 384 - 0.304688
FN0899 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS1558597 717 + 0.241283
FN0900 Metal dependent hydrolasechromosome CDS1559320 783 + 0.272031
FN0903 Polysialic acid capsule expression protein kpsFchromosome CDS1561256 972 + 0.297325
FN0904 NAD(FAD)-utilizing dehydrogenaseschromosome CDS1562237 1584 + 0.265152
FN0907 Ribosomal RNA small subunit methyltransferase Cchromosome CDS1565414 672 - 0.21131
FN0922 Homoserine kinasechromosome CDS1576678 939 - 0.186368
FN0929 ATP/GTP hydrolasechromosome CDS1583097 462 - 0.274892
FN0931 Phosphohydrolase (MUTT/NUDIX family protein)chromosome CDS1584023 618 - 0.245955
FN0938 Hypothetical proteinchromosome CDS1590427 789 - 0.333333
FN0946 Zinc metalloproteasechromosome CDS1599774 690 + 0.208696
FN0954 biotin synthase related domain containing proteinchromosome CDS1610459 1248 - 0.294872
FN0965 D-3-phosphoglycerate dehydrogenasechromosome CDS1618418 966 - 0.26087
FN0995 Hypothetical proteinchromosome CDS1650106 627 + 0.264753
FN0997 Hypothetical proteinchromosome CDS1651474 651 - 0.273425
FN1006 Acetyltransferasechromosome CDS1661088 399 - 0.22807
FN1011 MGPA proteinchromosome CDS1664785 966 - 0.258799
FN1023 5-Nitroimidazole antibiotic resistance proteinchromosome CDS1677650 471 - 0.242038
FN1025 Guanine-hypoxanthine permeasechromosome CDS1678714 1308 - 0.309633
FN1029 Zinc proteasechromosome CDS1682475 1227 - 0.248574
FN1030 Hypothetical membrane-spanning proteinchromosome CDS1683720 1092 - 0.258242
FN1031 Hypothetical membrane-spanning proteinchromosome CDS1684811 1080 - 0.260185
FN1033 Methyltransferasechromosome CDS1686454 1182 - 0.265651
FN1035 Iron-sulfur flavoproteinchromosome CDS1688420 480 + 0.235417
FN1038 Transporterchromosome CDS1690215 912 + 0.269737
FN1041 Acetyltransferasechromosome CDS1692221 1176 + 0.197279
FN1057 Diamine acetyltransferasechromosome CDS1704466 441 + 0.21542
FN1061 unknownchromosome CDS1707906 555 - 0.223423
FN1062 Hydrolasechromosome CDS1708494 783 - 0.249042
FN1063 N-acyl-L-amino acid amidohydrolasechromosome CDS1709465 1185 + 0.303797
FN1067 Tetratricopeptide repeat family proteinchromosome CDS1713226 714 + 0.298319
FN1072 GTP-binding proteinchromosome CDS1719441 1101 + 0.28247
FN1075 Hypothetical proteinchromosome CDS1722182 648 + 0.263889
FN1085 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzymechromosome CDS1729074 549 + 0.282332
FN1086 Transporterchromosome CDS1729767 1326 + 0.206637
FN1088 NADH oxidasechromosome CDS1731848 1308 + 0.283639
FN1089 ATP-binding protein (contains P-loop)chromosome CDS1733182 873 + 0.261168
FN1092 Hypothetical proteinchromosome CDS1737407 915 + 0.293989
FN1101 ATPasechromosome CDS1744687 1413 + 0.254777
FN1107 Acetyltransferasechromosome CDS1752101 327 + 0.2263
FN1108 Phosphohydrolase (MUTT/NUDIX family protein)chromosome CDS1752450 489 + 0.253579
FN1114 unknownchromosome CDS1758156 591 + 0.196277
FN1115 Hypothetical membrane-spanning proteinchromosome CDS1758925 735 + 0.232653
FN1126 Acetyltransferasechromosome CDS1769910 468 - 0.192308
FN1138 Hypothetical cytosolic proteinchromosome CDS1785609 432 + 0.347222
FN1142 Oxygen-independent coproporphyrinogen III oxidasechromosome CDS1791669 915 + 0.252459
FN1162 Hydroxyacylglutathione hydrolasechromosome CDS1820301 624 + 0.280449
FN1168 Macrolide-efflux proteinchromosome CDS1826741 909 - 0.207921
FN1179 ATP-dependent RNA helicasechromosome CDS1839420 2439 - 0.239852
FN1186 Amidohydrolasechromosome CDS1848896 1080 + 0.32037
FN1198 Transporterchromosome CDS1857769 1263 - 0.25099
FN1203 GTP-binding proteinchromosome CDS1862401 870 - 0.274713
FN1204 Methyltransferasechromosome CDS1863251 708 - 0.292373
FN1207 Hypothetical proteinchromosome CDS1866081 825 - 0.254545
FN1210 Metal dependent hydrolasechromosome CDS1869030 1827 - 0.278599
FN1231 Inosine-5'-monophosphate dehydrogenasechromosome CDS1887533 1464 - 0.327186
FN1233 Putative NAD(P)H oxidoreductasechromosome CDS1889529 543 + 0.267035
FN1235 Ankyrin repeat proteinschromosome CDS1891055 1434 + 0.264296
FN1236 Choline transport proteinchromosome CDS1892602 969 - 0.23323
FN1240 Lipopolysaccharide core biosynthesis protein rfaYchromosome CDS1897147 723 - 0.22545
FN1250 Guanine-hypoxanthine permeasechromosome CDS1906576 1347 - 0.314774
FN1267 Hypothetical proteinchromosome CDS1923144 618 - 0.254045
FN1268 Methionyl-tRNA synthetasechromosome CDS1923773 1911 - 0.281005
FN1276 Hypothetical proteinchromosome CDS1934945 396 + 0.255051
FN1278 Acetyltransferasechromosome CDS1936872 393 - 0.244275
FN1279 Zinc metallohydrolase, glyoxalase II familychromosome CDS1937380 981 - 0.298675
FN1295 Acetyltransferasechromosome CDS1953248 408 - 0.227941
FN1301 ABC transporter ATP-binding proteinchromosome CDS1957809 1620 + 0.3
FN1306 Methyltransferasechromosome CDS1961814 1701 + 0.25632
FN1308 Phosphatidate cytidylyltransferasechromosome CDS1964280 642 + 0.207165
FN1345 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoatehydrola sechromosome CDS1998220 828 - 0.247585
FN1350 Integral membrane proteinchromosome CDS2002449 438 - 0.294521
FN1362 Dipeptide transport ATP-binding protein dppDchromosome CDS2013958 702 + 0.254986
FN1368 COMF operon protein 3chromosome CDS2018247 615 - 0.237398
FN1369 Zinc finger proteinchromosome CDS2018869 228 - 0.307018
FN1382 ATPasechromosome CDS2033289 1209 + 0.230769
FN1384 IAA acetyltransferasechromosome CDS2037978 369 - 0.276423
FN1387 Metal dependent hydrolasechromosome CDS2042980 714 - 0.242297
FN1391 Acetyltransferasechromosome CDS2048924 270 + 0.27037
FN1400 serine/threonine kinasechromosome CDS2055479 3057 + 0.216879
FN1403 Histidine permeasechromosome CDS2061883 1311 + 0.329519
FN1412 5-methylthioribose kinasechromosome CDS2072142 1155 - 0.245887
FN1427 Phenazine biosynthesis protein phzFchromosome CDS2095942 882 + 0.261905
FN1433 Short chain dehydrogenasechromosome CDS2101828 783 - 0.273308
FN1434 Tetratricopeptide repeat family proteinchromosome CDS2102628 1974 - 0.293313
FN1450 Integral membrane proteinchromosome CDS2130094 1407 - 0.304904
FN1465 Permeasechromosome CDS2148126 876 + 0.200913
FN1468 Flavoredoxinchromosome CDS2149882 594 - 0.274411
FN1477 Hypothetical membrane-spanning proteinchromosome CDS2159644 714 + 0.239496
FN1484 Tetratricopeptide repeat family proteinchromosome CDS2166628 738 - 0.200542
FN1486 magnesium and cobalt efflux protein CorCchromosome CDS2168109 1281 - 0.283372
FN1487 Chorismate mutasechromosome CDS2169649 462 - 0.272727
FN1497 Multidrug resistance protein 2chromosome CDS1104 1125 - 0.243556
FN1498 Integral membrane proteinchromosome CDS2703 900 + 0.284444
FN1532 murein hydrolase exporterchromosome CDS45026 384 - 0.304688
FN1553 abortive phage resistance proteinchromosome CDS67240 1389 - 0.235421
FN1586 O-succinylbenzoate-CoA synthasechromosome CDS97505 1128 - 0.315603
FN1587 Acetyltransferasechromosome CDS98981 414 + 0.198068
FN1601 Hypothetical cytosolic proteinchromosome CDS109922 1077 - 0.276695
FN1665 Virulence-associated protein Ichromosome CDS162655 300 + 0.256667
FN1669 Choline transport proteinchromosome CDS165650 927 - 0.24164
FN1682 Heteropolysaccharide repeat unit export proteinchromosome CDS177153 1461 - 0.199179
FN1687 Gluconate 5-dehydrogenasechromosome CDS182990 813 - 0.266913
FN1691 Hypothetical membrane-spanning proteinchromosome CDS186722 1149 - 0.201915
FN1701 ABC transporter ATP-binding proteinchromosome CDS195879 1350 - 0.218519
FN1706 Transporterchromosome CDS201573 765 + 0.290196
FN1715 ATPasechromosome CDS211180 1293 + 0.233565
FN1744 Transporterchromosome CDS242129 882 - 0.263039
FN1753 ThiH proteinchromosome CDS249304 1131 - 0.279399
FN1787 Tetratricopeptide repeat family proteinchromosome CDS267902 1887 + 0.242713
FN1806 Integral membrane proteinchromosome CDS287864 864 + 0.280093
FN1829 Hypothetical proteinchromosome CDS317807 840 - 0.216667
FN1836 Tetratricopeptide repeat family proteinchromosome CDS323994 2811 - 0.260761
FN1844 Ketoacyl reductase hetNchromosome CDS333733 774 + 0.254522
FN1848 Metal dependent hydrolasechromosome CDS337252 792 + 0.242424
FN1861 L-lysine permeasechromosome CDS351775 624 - 0.270833
FN1862 L-beta-lysine 5,6-aminomutase beta subunitchromosome CDS352421 792 - 0.316919
FN1865 Hypothetical proteinchromosome CDS356233 963 - 0.286604
FN1873 Bis(5'-nucleosyl)-tetraphosphatasechromosome CDS363192 339 - 0.303835
FN1876 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzymechromosome CDS364552 603 - 0.227197
FN1877 Guanine-hypoxanthine permeasechromosome CDS365299 1329 - 0.297968
FN1881 Esterasechromosome CDS368340 390 - 0.246154
FN1885 Hemolysin IIIchromosome CDS370824 648 + 0.29321
FN1894 BAX proteinchromosome CDS381821 612 - 0.277778
FN1900 pfoS/Rchromosome CDS388384 993 + 0.294058
FN1913 hydrolase (HD superfamily)chromosome CDS410144 1527 - 0.311722
FN1918 SPO0B-associated GTP-binding proteinchromosome CDS413830 1287 - 0.304584
FN1919 Methyltransferasechromosome CDS415223 750 - 0.289333
FN1926 Nitrogen regulatory IIA proteinchromosome CDS424442 936 - 0.268162
FN1929 Competence-damage protein cinAchromosome CDS428615 1209 - 0.282878
FN1944 Sodium-dependent tryptophan transporterchromosome CDS446707 1380 + 0.331884
FN1948 Hypothetical proteinchromosome CDS453255 360 - 0.247222
FN1951 ATPase associated with chromosome architecture/replicationchromosome CDS458490 528 - 0.30303
FN1955 unknownchromosome CDS460076 195 + 0.194872
FN1964 O-linked GLCNAC transferasechromosome CDS461736 2130 - 0.290141
FN1965 Tetratricopeptide repeat family proteinchromosome CDS464150 1038 - 0.286127
FN1976 4-amino-4-deoxychorismate lyasechromosome CDS477335 933 + 0.265809
FN1989 Sodium-dependent tyrosine transporterchromosome CDS492571 1317 + 0.321944
FN2000 HIPA proteinchromosome CDS500926 438 + 0.260274
FN2003 bioY proteinchromosome CDS503885 549 + 0.31694
FN2013 GTP-binding proteinchromosome CDS514158 585 - 0.259829
FN2046 Acetyltransferasechromosome CDS551001 450 - 0.24
FN2068 dGTP triphosphohydrolasechromosome CDS577535 1542 - 0.264591
FN2079 ABC transporter ATP-binding proteinchromosome CDS590432 777 - 0.27027
FN2080 ABC transporter integral membrane proteinchromosome CDS591211 837 - 0.303465
FN2081 ABC transporter substrate-binding proteinchromosome CDS592165 900 - 0.287778
FN2101 Transporterchromosome CDS610386 906 + 0.281457
FN2102 ABC transporter ATP-binding proteinchromosome CDS611317 1896 + 0.275316
FN2104 tricarboxylate transport membrane protein TctBchromosome CDS614377 444 + 0.238739
FN2122 Phenylalanyl-tRNA synthetase beta chainchromosome CDS629888 2397 - 0.277013
FN2124 Hypothetical protein with Metallo-phosphoesterase motifchromosome CDS633341 462 - 0.261905