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2024-05-03 06:25:17

Gene list

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COG category: General function prediction only
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 159

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Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0629 MOSC domain proteinchromosome CDS617122 774 + 0.248062
NA SAR11_0417 similarity to serine esterasechromosome CDS405618 612 + 0.279412
NA SAR11_0187 drug/metabolite transporter (dmt superfamily)chromosome CDS187198 885 - 0.309605
NA SAR11_1191 possible HIT domainchromosome CDS1143032 405 - 0.246914
NA SAR11_1003 metallo-beta-lactamase family proteinchromosome CDS983112 780 + 0.252564
NA SAR11_1255 Putative NADPH-quinone reductasechromosome CDS1196458 570 - 0.305263
NA SAR11_1344 Protein of unknown function DUF6chromosome CDS1281350 858 + 0.280886
NA SAR11_0106 tetratricopeptide repeat (tpr) family proteinchromosome CDS117106 1686 - 0.246738
NA SAR11_0661 conserved hypothetical proteinchromosome CDS645966 492 - 0.280488
NA SAR11_0349 Predicted O-linked N-acetylglucosamine transferasechromosome CDS339853 1674 + 0.240143
NA SAR11_0900 metallo-beta-lactamase family proteinchromosome CDS864609 1656 + 0.323068
NA SAR11_1229 hydroxyacylglutathione hydrolasechromosome CDS1174245 1014 + 0.309665
NA SAR11_0303 deoxyribodipyrimidine photolyase-related proteinchromosome CDS299342 1491 - 0.275654
NA SAR11_0304 short chain dehydrogenasechromosome CDS300899 672 + 0.33631
NA SAR11_1166 unknownchromosome CDS1121220 336 - 0.229167
NA SAR11_0665 Integral membrane protein with domain of unknown function DUF6chromosome CDS648881 882 + 0.309524
NA SAR11_0464 HAD-superfamily hydrolasechromosome CDS457569 672 - 0.264881
NA SAR11_0183 Xanthine/uracil/vitamin C permease family proteinchromosome CDS184378 1311 + 0.353166
NA SAR11_1320 AFG1-like ATPasechromosome CDS1254956 861 - 0.210221
NA SAR11_0372 possible methylase or methyltransferasechromosome CDS363342 864 + 0.259259
NA SAR11_0393 Putative SAM-dependent methyltransferasechromosome CDS385353 696 + 0.20977
NA SAR11_0326 putative acetyltransferasechromosome CDS324191 504 - 0.279762
NA SAR11_1720 unknown membrane proteinchromosome CDS193953 390 - 0.233333
NA SAR11_1020 Acetyltransferasechromosome CDS999127 444 + 0.337838
NA SAR11_0202 probable biotin synthasechromosome CDS204616 552 + 0.273551
NA SAR11_0856 short chain dehydrogenasechromosome CDS825622 759 - 0.304348
NA SAR11_1022 Permeases of the drug/metabolite transporter (DMT) superfamilychromosome CDS1000426 813 - 0.344403
NA SAR11_0767 short chain dehydrogenasechromosome CDS743871 747 + 0.323963
NA SAR11_0173 possible 2-hydroxy-6-oxo-2,4-heptadienoate hydrolasechromosome CDS176158 543 + 0.281768
NA SAR11_0561 oxidoreductase familychromosome CDS554312 741 + 0.17139
NA SAR11_0830 probable MFS transporter (Major Facilitator Superfamily)chromosome CDS800522 1221 + 0.307125
NA SAR11_0327 Histidine triad (HIT) proteinchromosome CDS324691 366 - 0.29235
NA SAR11_1724 YGGT familychromosome CDS315020 357 + 0.27451
NA SAR11_1023 conserved hypothetical proteinchromosome CDS1001292 903 - 0.289037
NA SAR11_0752 possible transmembrane proteinchromosome CDS733559 747 - 0.303882
NA SAR11_1348 unknown membrane proteinchromosome CDS1284287 1164 - 0.301546
NA SAR11_0846 short chain dehydrogenasechromosome CDS815628 750 + 0.309333
NA SAR11_0877 Unknown Proteinchromosome CDS842772 252 - 0.289683
NA SAR11_0142 pirinchromosome CDS147644 840 + 0.339286
NA SAR11_1214 tetratricopeptide repeat family proteinchromosome CDS1160941 1209 + 0.221671
NA SAR11_1195 probable membrane permease of unknown functionchromosome CDS1145866 1209 - 0.291977
NA SAR11_0650 TPR-likechromosome CDS636586 438 + 0.226027
NA SAR11_0674 short chain dehydrogenasechromosome CDS658050 762 - 0.312336
NA SAR11_1263 probable dioxygenase alpha chainchromosome CDS1200049 1194 - 0.335846
NA SAR11_0840 putative transmembrane permeasechromosome CDS808448 1083 + 0.300092
NA SAR11_1347 hypothetical proteinchromosome CDS1283524 762 - 0.26378
NA SAR11_1198 bacterial transferase family proteinchromosome CDS1148558 513 - 0.333333
NA SAR11_0374 Putative phospholipid-binding domainchromosome CDS364195 594 + 0.276094
NA SAR11_1226 methyltransferasechromosome CDS1171170 570 - 0.207018
NA SAR11_0530 cyclopropane-fatty-acyl-phospholipid synthase (CMAS family)chromosome CDS522650 1182 + 0.222504
NA SAR11_0436 alpha/beta hydrolase fold proteinchromosome CDS429853 654 - 0.259939
NA SAR11_1192 Domain of unknown function DUF81chromosome CDS1143439 765 - 0.282353
NA SAR11_1071 GCN5-related N-acetyltransferasechromosome CDS1038595 264 + 0.318182
NA SAR11_1342 alpha/beta hydrolase foldchromosome CDS1279081 783 + 0.261814
NA SAR11_0082 probable short-chain dehydrogenasechromosome CDS97348 753 + 0.286853
NA SAR11_0184 probable phosphoribosyltransferasechromosome CDS185722 537 - 0.286778
NA SAR11_0533 methyltransferasechromosome CDS526036 774 - 0.202842
NA SAR11_0823 Putative integral membrane proteinchromosome CDS795867 474 - 0.257384
NA SAR11_1185 Integral membrane protein DUF6chromosome CDS1137555 885 + 0.294915
NA SAR11_0274 major facilitator superfamily transporterchromosome CDS276222 1218 - 0.301314
NA SAR11_0306 hypothetical protein SC5C7.08 SC5C7.08chromosome CDS302639 1053 - 0.296296
NA SAR11_1134 hypothetical proteinchromosome CDS1089302 750 - 0.305333
NA SAR11_1232 conserved hypothetical proteinchromosome CDS1176246 894 - 0.253915
NA SAR11_0686 Integral membrane protein DUF6chromosome CDS670773 687 + 0.311499
NA SAR11_0275 probable dehydrogenasechromosome CDS277460 954 - 0.325996
NA SAR11_0385 Conserved hypothetical proteinchromosome CDS375518 462 + 0.199134
NA SAR11_0773 short chain dehydrogenasechromosome CDS749914 762 + 0.314961
NA SAR11_0445 possible Methyltransferase FkbMchromosome CDS440311 771 - 0.203632
NA SAR11_1275 alpha/beta hydrolase foldchromosome CDS1210062 735 - 0.315646
NA SAR11_1289 short chain dehydrogenasechromosome CDS1224047 756 + 0.279101
NA SAR11_0749 ABC transporterchromosome CDS730989 888 + 0.255631
NA SAR11_0531 FabG-like proteinchromosome CDS523831 780 + 0.30641
NA SAR11_0296 possible transmembrane proteinchromosome CDS295195 459 + 0.30719
NA SAR11_0260 Transporterchromosome CDS262705 894 - 0.295302
NA SAR11_0168 amine oxidasechromosome CDS171583 972 - 0.259259
NA SAR11_0621 GcvT-like Aminomethyltransferase proteinchromosome CDS609626 888 - 0.265766
NA SAR11_0299 possible transmembrane proteinchromosome CDS297179 222 - 0.337838
NA SAR11_1273 acetyltransferasechromosome CDS1209188 468 + 0.324786
NA SAR11_1075 O-methyltransferasechromosome CDS1041631 651 - 0.281106
NA SAR11_1018 Methyltransferase FkbMchromosome CDS997089 774 - 0.20155
NA SAR11_0322 Uncharacterized proteinchromosome CDS319743 642 + 0.26324
NA SAR11_0677 hypothetical proteinchromosome CDS660441 537 + 0.256983
NA SAR11_1280 conserved hypothetical proteinchromosome CDS1212866 852 + 0.300469
NA SAR11_0715 Predicted permease YjgP/YjgQ family proteinchromosome CDS698741 1137 - 0.204046
NA SAR11_0625 bacteriorhodopsinchromosome CDS614302 768 + 0.395833
NA SAR11_0869 short chain dehydrogenasechromosome CDS838936 747 + 0.330656
NA SAR11_0694 HI0933-like proteinchromosome CDS677178 1182 + 0.313029
NA SAR11_1367 hypothetical transport proteinchromosome CDS1299633 900 - 0.265556
NA SAR11_0811 sodium:solute transporter familychromosome CDS786575 1449 + 0.291235
NA SAR11_0737 alpha/beta hydrolasechromosome CDS721767 657 - 0.321157
NA SAR11_0555 CMAS familychromosome CDS548924 612 + 0.196078
NA SAR11_0638 Phosphoribulokinase/Uridine kinase Family Proteinchromosome CDS623595 825 + 0.271515
NA SAR11_1257 conserved hypothetical proteinchromosome CDS1197221 423 - 0.286052
NA SAR11_0669 Flavin containing amine oxidoreductaschromosome CDS654309 1245 + 0.264257
NA SAR11_0195 Phosphotransferase enzyme family proteinchromosome CDS195792 966 - 0.23499
NA SAR11_0861 short chain dehydrogenasechromosome CDS829950 777 + 0.33462
NA SAR11_1323 unknown membrane proteinchromosome CDS1257732 645 - 0.224806
NA SAR11_0558 Cyclopropane-fatty-acyl-phospholipidchromosome CDS551827 702 + 0.232194
NA SAR11_0048 Sodium Bile symporter family proteinchromosome CDS58997 849 - 0.328622
NA SAR11_0196 possible cell division control protein 6chromosome CDS196761 459 - 0.276688
NA SAR11_0791 probable ring-cleaving dioxygenasechromosome CDS765612 411 + 0.318735
aarF SAR11_0406 ubiquinone biosynthesis proteinchromosome CDS394951 1368 - 0.30848
abrB SAR11_1204 possible AbrB proteinchromosome CDS1153904 1098 + 0.287796
acrB SAR11_0701 probable integral membrane proteinchromosome CDS684906 2385 - 0.273375
adhP SAR11_0272 alcohol dehydrogenase (Zn containing) (adh-5)chromosome CDS273915 858 - 0.377622
ampG SAR11_0213 muropeptide permeasechromosome CDS214052 1377 + 0.33406
apaG SAR11_0834 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolaseschromosome CDS804165 435 + 0.342529
bax SAR11_0379 Bax protein (hydrolyses peptidoglycan)chromosome CDS370252 1116 + 0.274194
cgtA SAR11_0222 GTP-binding proteinchromosome CDS221539 984 + 0.330285
cinA SAR11_0943 competence/damage-inducible protein CinAchromosome CDS928018 492 - 0.276423
cobS SAR11_0449 Cobalamin biosynthesis protein CobSchromosome CDS446380 975 - 0.322051
comL SAR11_0017 putative competence lipoprotein ComLchromosome CDS19571 849 - 0.273263
csaA SAR11_1326 CsaA proteinchromosome CDS1261647 342 - 0.30117
cvpA SAR11_0700 Colicin V production proteinchromosome CDS684353 546 - 0.261905
dhlB SAR11_0137 (S)-2-haloacid dehalogenasechromosome CDS144244 663 + 0.277526
ephX1 SAR11_0803 epoxide hydrolasechromosome CDS777304 1143 + 0.339458
fabG SAR11_0707 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS690915 738 + 0.285908
fdhF SAR11_0679 formate dehydrogenase Alpha subunit (fdhF-2)chromosome CDS662447 2769 - 0.335139
fxsA SAR11_0337 Cytoplasmic membrane proteinchromosome CDS331194 423 + 0.293144
glbN SAR11_1217 Bacterial-like globinchromosome CDS1164385 402 + 0.293532
gloB SAR11_0219 Hydroxyacylglutathione hydrolase cytoplasmicchromosome CDS220052 720 + 0.291667
gltD SAR11_0433 glutamate synthase (NADPH) beta chainchromosome CDS423061 1440 + 0.343056
gph SAR11_1153 phosphoglycolate phosphatasechromosome CDS1107717 690 + 0.3
gutQ SAR11_0497 Arabinose 5-phosphate isomerasechromosome CDS485035 972 - 0.281893
met17 SAR11_1259 unknown CoA binding proteinchromosome CDS1198060 438 - 0.296804
metW SAR11_0218 methionine biosynthesis proteinchromosome CDS219455 597 + 0.261307
mhpC SAR11_0247 hydrolasechromosome CDS249763 777 - 0.284427
mviN SAR11_0376 Virulence factor MVIN-likechromosome CDS367124 1527 + 0.257367
nudH SAR11_0228 probable (di)nucleoside polyphosphate hydrolasechromosome CDS226898 477 + 0.297694
paaD SAR11_0744 possible phenylacetic acid degradation proteinchromosome CDS728096 297 + 0.323232
pheT SAR11_0443 phenylalanine-tRNA ligasechromosome CDS435994 2409 + 0.295143
pmbA SAR11_0169 protein for maturation of antibiotic MccB17chromosome CDS172551 1320 - 0.289394
prpD SAR11_1154 2-methylcitrate dehydratase 2chromosome CDS1108457 1503 + 0.322023
qor SAR11_0143 Quinone oxidoreductasechromosome CDS148483 975 + 0.332308
rarD SAR11_0995 rarD proteinchromosome CDS975511 882 + 0.27551
recX SAR11_0824 Regulatory proteinchromosome CDS796378 555 + 0.273874
salY SAR11_0696 hypothetical proteinchromosome CDS679765 861 - 0.326365
set1 SAR11_0459 Nuclear protein SETchromosome CDS453922 480 - 0.2875
sfsA SAR11_1135 sugar fermentation stimulation proteinchromosome CDS1090073 699 + 0.274678
slyX SAR11_0693 SlyXchromosome CDS676886 276 + 0.257246
smtA SAR11_0528 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) familychromosome CDS520922 660 + 0.280303
thrB SAR11_0125 Homoserine kinasechromosome CDS134707 969 + 0.223942
tldD SAR11_0170 protein that suppresses inhibitory activity of CsrAchromosome CDS173876 1413 - 0.327672
trmE SAR11_0350 tRNA modification GTPasechromosome CDS341586 1332 + 0.3003
ucpA SAR11_0775 oxidoreductasechromosome CDS752477 744 + 0.330645
ybgC SAR11_0872 4-hydroxybenzoyl-CoA thioesterase family proteinchromosome CDS840723 426 + 0.262911
ybgL SAR11_0662 LamB/YcsF familychromosome CDS646461 798 - 0.305764
ybhL SAR11_0291 integral membrane proteinchromosome CDS290968 699 - 0.316166
ycaD SAR11_0695 transporterchromosome CDS678384 1323 - 0.318216
yceA SAR11_1074 rhodanese domain proteinchromosome CDS1040726 906 - 0.263797
ydeD SAR11_0431 Transporterchromosome CDS421222 888 + 0.290541
yedY SAR11_0759 Oxidoreductasechromosome CDS737902 906 - 0.31457
yeeE SAR11_1258 conserved hypothetical membrane proteinchromosome CDS1197640 420 - 0.278571
yggA SAR11_0800 Lysine efflux pumpchromosome CDS774387 606 + 0.235974
yggS SAR11_0361 hypothetical proteinchromosome CDS353591 651 + 0.273425
yhbG SAR11_0495 probable sulfate/thiosulfate import ATP-binding protein cysAchromosome CDS483672 777 - 0.303732
yhdH SAR11_1244 zinc-binding alcohol dehydrogenasechromosome CDS1186325 1002 - 0.316367
yjcG SAR11_0316 Na+/solute symporter (Ssf family)chromosome CDS313133 1809 + 0.393035
yyaM SAR11_0867 hypothetical transport protein yyaMchromosome CDS836512 855 - 0.294737