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2024-05-14 12:46:57

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: chromosome

Number of genes found: 115

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Saccharophagus degradans 2-40, 2-40
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Sde_0328 ABC transporter permeasechromosome CDS409270 1305 + 0.449808
NA Sde_3281 Protein of unknown function DM13chromosome CDS4190755 753 - 0.438247
NA Sde_3936 H+-transporting two-sector ATPase, delta (OSCP) subunitchromosome CDS4961625 1476 - 0.480352
NA Sde_0688 Polyketide synthase modules and related proteins-likechromosome CDS877133 6783 + 0.46646
NA Sde_1947 putative copper resistance transmembrane proteinchromosome CDS2447970 1884 - 0.541401
NA Sde_0124 short chain dehydrogenase family proteinchromosome CDS156003 660 + 0.521212
NA Sde_2152 ATPase FliI/YscNchromosome CDS2745410 765 + 0.471895
NA Sde_1852 methyltransferase, putativechromosome CDS2342927 978 - 0.48773
NA Sde_1603 putative beta-ketoacyl synthasechromosome CDS2059034 1857 + 0.488961
NA Sde_2842 ATP-binding protein of ABC transporterchromosome CDS3591589 954 - 0.454927
NA Sde_0079 Cellulose binding, type IVchromosome CDS100894 777 + 0.47619
NA Sde_1930 Membrane-fusion protein-likechromosome CDS2431780 1890 + 0.461376
NA Sde_3934 H+-transporting two-sector ATPase, gamma subunitchromosome CDS4955242 3129 + 0.493768
NA Sde_0309 HlyD family secretion proteinchromosome CDS381566 1251 - 0.466027
NA Sde_2377 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3014930 822 - 0.523114
NA Sde_1475 TonB-dependent receptorchromosome CDS1897463 885 + 0.422599
NA Sde_3524 ABC transporter, ATP-binding proteinchromosome CDS4478580 834 - 0.440048
NA Sde_3236 GAF domain proteinchromosome CDS4123453 1737 - 0.496834
NA Sde_0761 putative oxidoreductasechromosome CDS982746 768 + 0.502604
NA Sde_3826 conserved hypothetical proteinchromosome CDS4826078 597 + 0.507538
NA Sde_3397 putative non-ribosomal peptide synthetasechromosome CDS4330475 2205 - 0.447619
NA Sde_3728 Oleoyl-(acyl-carrier protein) hydrolasechromosome CDS4726132 762 - 0.434383
NA Sde_2442 putative short-chain dehydrogenasechromosome CDS3087378 696 + 0.465517
NA Sde_0407 hypothetical proteinchromosome CDS503837 363 - 0.509642
NA Sde_2447 RND family efflux transporterchromosome CDS3092071 3162 - 0.447818
NA Sde_1330 beta-ketothiolase, acetoacetyl-CoA reductasechromosome CDS1724437 723 - 0.449516
NA Sde_0471 transcriptional regulator, ArsR familychromosome CDS574349 1008 - 0.499008
NA Sde_0035 DNA-damage-inducible protein Fchromosome CDS40360 1551 - 0.488072
NA Sde_3527 MATE efflux family proteinchromosome CDS4480780 1332 - 0.485736
NA Sde_3736 Na+ extrusion transport system ATP-binding proteinchromosome CDS4736322 750 - 0.461333
NA Sde_1283 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS1646062 777 + 0.469755
NA Sde_0387 lipid A ABC transporter, ATP-binding/permease proteinchromosome CDS477227 1761 - 0.465077
NA Sde_1956 hypothetical proteinchromosome CDS2461730 1077 - 0.472609
NA Sde_3726 Phytoene dehydrogenase and related proteins-likechromosome CDS4722996 1761 + 0.469052
NA Sde_0484 putative methyltransferasechromosome CDS596464 723 - 0.50899
NA Sde_2455 histidine kinasechromosome CDS3104263 258 - 0.426357
NA Sde_3096 membrane-fusion proteinchromosome CDS3951917 1197 - 0.502924
NA Sde_3489 putative secretion proteinchromosome CDS4443407 1182 - 0.401015
NA Sde_3095 AcrB/AcrD/AcrF family proteinchromosome CDS3948636 3282 - 0.448812
NA Sde_1886 Pseudouridine synthase, Rsuchromosome CDS2381162 1602 + 0.433833
NA Sde_1866 ATP binding protein of heme exporter Achromosome CDS2357809 672 + 0.473214
NA Sde_0176 Methylase involved in ubiquinone/menaquinone biosynthesis-likechromosome CDS217187 783 - 0.408685
NA Sde_1119 efflux transporter, RND family, MFP subunitchromosome CDS1449526 1110 - 0.484685
NA Sde_0949 gluconate 5-dehydrogenase, putativechromosome CDS1229763 795 - 0.481761
NA Sde_2486 Peptide chain release factor 3chromosome CDS3138419 846 - 0.496454
NA Sde_0292 conserved hypothetical proteinchromosome CDS362987 732 - 0.491803
NA Sde_2448 Membrane-fusion protein-likechromosome CDS3095296 1080 - 0.45
NA Sde_2269 RND family efflux transporterchromosome CDS2881017 3120 + 0.478846
NA Sde_3400 isochorismate synthase; RBL00457chromosome CDS4335363 1266 - 0.491311
NA Sde_1629 YajCchromosome CDS2092884 744 + 0.469086
NA Sde_1859 Gluconate transporterchromosome CDS2351162 789 + 0.47782
NA Sde_3393 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS4325115 747 - 0.475234
NA Sde_3401 conserved hypothetical phosphopantetheinyl transferasechromosome CDS4336899 729 + 0.45679
NA Sde_3492 transcriptional regulator, GntR familychromosome CDS4447791 264 + 0.409091
NA Sde_2022 generic methyl-transferasechromosome CDS2546432 885 - 0.465537
NA Sde_2612 conserved hypothetical proteinchromosome CDS3308568 810 - 0.5
NA Sde_2451 thioesterase involved in non-ribosomal peptide biosynthesis-likechromosome CDS3098702 786 - 0.473282
NA Sde_1544 Threonyl-tRNA synthetase, class IIachromosome CDS1990462 738 + 0.460705
NA Sde_3933 ATP synthase F1, beta subunitchromosome CDS4954062 1188 + 0.527778
NA Sde_3767 putative transcriptional regulator, Fis familychromosome CDS4767275 1107 + 0.469738
NA Sde_2782 Multidrug resistance efflux pump-likechromosome CDS3514849 1206 + 0.475954
NA Sde_3398 Alkylhydroperoxidase AhpD corechromosome CDS4332672 960 - 0.458333
NA Sde_3007 N-acetylglucosamine-6-phosphate deacetylasechromosome CDS3835207 1275 - 0.437647
NA Sde_3235 peptidase, M50 familychromosome CDS4121314 2136 - 0.465824
NA Sde_2283 methyl-accepting chemotaxis sensory transducerchromosome CDS2903787 1086 + 0.426335
NA Sde_2457 beta-ketoacyl-acyl carrier protein synthase IIchromosome CDS3104884 1329 - 0.436418
NA Sde_2755 conserved hypothetical proteinchromosome CDS3487626 1113 - 0.456424
NA Sde_3725 Polyketide synthase modules and related proteins-likechromosome CDS4713460 9336 + 0.474614
NA Sde_0177 conserved hypothetical proteinchromosome CDS218019 783 - 0.458493
NA Sde_0162 Methylase involved in ubiquinone/menaquinone biosynthesis-likechromosome CDS200151 834 + 0.470024
NA Sde_1219 Peptidoglycan-binding LysMchromosome CDS1566451 843 + 0.478055
NA Sde_0705 Pyridoxal phosphate biosynthetic protein PdxAchromosome CDS915597 564 - 0.367021
NA Sde_1756 acriflavin resistance proteinchromosome CDS2243684 1092 + 0.462454
NA Sde_0315 Phosphoenolpyruvate-protein phosphotransferasechromosome CDS389554 1710 + 0.469006
NA Sde_2646 Phosphatidylserine decarboxylasechromosome CDS3347386 777 - 0.492922
NA Sde_3234 conserved hypothetical proteinchromosome CDS4120349 930 - 0.484946
NA Sde_2848 histidine kinasechromosome CDS3602041 654 + 0.43578
NA Sde_3620 conserved hypothetical proteinchromosome CDS4593855 1041 + 0.433237
NA Sde_0537 conserved hypothetical proteinchromosome CDS657878 1383 + 0.510484
NA Sde_0689 Polyketide synthase modules and related proteins-likechromosome CDS883923 9222 + 0.462156
NA Sde_1291 3-hydroxybutyrate dehydrogenasechromosome CDS1654333 2136 + 0.449438
NA Sde_3521 oxidoreductasechromosome CDS4475769 762 + 0.511811
NA Sde_0771 transcriptional regulator, GntR familychromosome CDS995202 771 + 0.50454
NA Sde_1292 secretion protein, HlyD familychromosome CDS1656458 1386 + 0.467532
NA Sde_0380 ATPasechromosome CDS468285 741 + 0.491228
NA Sde_3396 putative non-ribosomal peptide synthetasechromosome CDS4328007 2430 - 0.461317
NA Sde_1631 Sodium:alanine symporterchromosome CDS2094334 1233 + 0.48013
NA Sde_1766 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunitchromosome CDS2253912 801 - 0.40824
NA Sde_3502 putative oxidoreductasechromosome CDS4457641 735 + 0.45034
NA Sde_1630 Pyridoxal phosphate-dependent deaminasechromosome CDS2093907 237 + 0.383966
NA Sde_1324 D-beta-hydroxybutyrate dehydrogenasechromosome CDS1719603 783 + 0.464879
NA Sde_2268 membrane-fusion proteinchromosome CDS2879749 1272 + 0.485849
NA Sde_1170 Ribosomal protein S16chromosome CDS1505235 957 + 0.445141
NA Sde_0248 conserved hypothetical proteinchromosome CDS312012 747 - 0.449799
NA Sde_0171 hypothetical proteinchromosome CDS211434 240 + 0.420833
NA Sde_1853 methyltransferasechromosome CDS2343901 738 - 0.48103
NA Sde_2923 ABC transporter, ATP-binding proteinchromosome CDS3707219 927 + 0.461704
NA Sde_3610 ABC transporter ATP-binding proteinchromosome CDS4576100 750 - 0.477333
NA Sde_3531 conserved hypothetical proteinchromosome CDS4484703 3492 + 0.480241
NA Sde_2469 TonB-dependent receptorchromosome CDS3120444 798 - 0.447368
NA Sde_0165 conserved hypothetical proteinchromosome CDS203758 240 + 0.416667
NA Sde_1294 Polyhydroxyalkanoate synthesis repressor PhaRchromosome CDS1659454 24966 + 0.463831
NA Sde_3519 conserved hypothetical proteinchromosome CDS4473595 672 - 0.474702
NA Sde_2456 hypothetical proteinchromosome CDS3104556 261 - 0.40613
NA Sde_1118 AcrB/AcrD/AcrF family proteinchromosome CDS1446310 3132 - 0.483716
NA Sde_3399 2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E)chromosome CDS4333679 1692 - 0.481678
NA Sde_2453 putative acyl-CoA synthasechromosome CDS3100767 1767 - 0.449349
NA Sde_3493 conserved hypothetical proteinchromosome CDS4448057 1572 + 0.468193
NA Sde_0998 beta-ketoacyl-ACP synthase Ichromosome CDS1280006 1218 - 0.510673
NA Sde_0726 ATPasechromosome CDS938921 741 - 0.496626
NA Sde_3137 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS4011089 1677 - 0.477042
NA Sde_3645 DNA repair protein RadCchromosome CDS4621872 597 + 0.453936
NA Sde_2050 Aspartate-semialdehyde dehydrogenasechromosome CDS2629697 696 - 0.422414
NA Sde_0048 methyl-accepting chemotaxis sensory transducerchromosome CDS52828 375 + 0.416
NA Sde_0526 TonB-dependent receptorchromosome CDS650063 1827 - 0.468528