Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: chromosome 1
Number of genes found: 88
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RSP_0610 | Putative 3-oxoacyl-(acyl-carrier-protein) reductase | chromosome 1 | CDS | 2349479 | 807 | - | 0.651797 |
NA | RSP_1534 | putative acyl carrier protein | chromosome 1 | CDS | 122749 | 246 | - | 0.617886 |
NA | RSP_0801 | deacetylase / probable acetylpolyamine aminohydrolase | chromosome 1 | CDS | 2544668 | 1140 | + | 0.72807 |
NA | RSP_1114 | Hemolysin-type calcium-binding toxin | chromosome 1 | CDS | 2872932 | 843 | + | 0.689205 |
NA | RSP_1113 | Hemolysin-type calcium-binding region; RTX toxin | chromosome 1 | CDS | 2871399 | 1314 | - | 0.703957 |
NA | RSP_2724 | Probable Methylase involved in ubiquinone/menaquinone biosynthesis | chromosome 1 | CDS | 1374928 | 720 | + | 0.736111 |
NA | RSP_2202 | Conserved hypothetical protein | chromosome 1 | CDS | 816157 | 492 | + | 0.752033 |
NA | RSP_6005 | Putative short chain dehydrogenase | chromosome 1 | CDS | 124949 | 741 | - | 0.766532 |
NA | RSP_1561 | AMP-forming acyl-CoA synthetase/ligase | chromosome 1 | CDS | 150337 | 1536 | - | 0.711589 |
NA | RSP_2411 | hypothetical protein | chromosome 1 | CDS | 1040755 | 801 | - | 0.707865 |
NA | RSP_0028 | Putative short-chain dehydrogenase/reductase | chromosome 1 | CDS | 1729383 | 999 | + | 0.744745 |
NA | RSP_2811 | Putative ABC transporter, periplasmic substrate-binding protein | chromosome 1 | CDS | 1503743 | 966 | - | 0.697723 |
NA | RSP_0634 | TRAP-T family transporter, DctM (12 TMs) subunit | chromosome 1 | CDS | 2371214 | 1308 | - | 0.668196 |
NA | RSP_0339 | hypothetical protein | chromosome 1 | CDS | 2069349 | 570 | - | 0.698246 |
NA | RSP_2458 | ABC transporter, ATPase subunit | chromosome 1 | CDS | 1099436 | 747 | - | 0.670683 |
NA | RSP_2857 | D-beta-hydroxybutyrate dehydrogenase | chromosome 1 | CDS | 1443169 | 798 | - | 0.680451 |
NA | RSP_2777 | 3-oxoacyl-(acyl-carrier-protein) synthase | chromosome 1 | CDS | 1424454 | 1209 | + | 0.680728 |
NA | RSP_2809 | ABC transporter, inner membrane subunit | chromosome 1 | CDS | 1505485 | 1101 | - | 0.677566 |
NA | RSP_2852 | Predicted polyketide biosynthesis associated protein | chromosome 1 | CDS | 1451545 | 645 | + | 0.703876 |
NA | RSP_1601 | conserved hypothetical protein | chromosome 1 | CDS | 198771 | 630 | - | 0.736508 |
NA | RSP_1075 | Short-chain dehydrogenase/reductase SDR | chromosome 1 | CDS | 2831175 | 801 | - | 0.716604 |
NA | RSP_0639 | Putative N-methylhydantoinase B | chromosome 1 | CDS | 2376335 | 1677 | - | 0.683363 |
NA | RSP_1196 | SAM-dependent methyltransferase | chromosome 1 | CDS | 2967095 | 813 | + | 0.728167 |
NA | RSP_1694 | Probable short-chain dehydrogenase/reductase | chromosome 1 | CDS | 282869 | 816 | - | 0.705882 |
NA | RSP_1535 | conserved hypothetical protein | chromosome 1 | CDS | 123055 | 1914 | - | 0.711599 |
NA | RSP_0099 | TRAP-T family sorbitol/mannitol transporter, DctQ (4TMs) subunit | chromosome 1 | CDS | 1811327 | 615 | - | 0.637398 |
NA | RSP_0765 | SAM-dependent methyltransferase | chromosome 1 | CDS | 2507492 | 642 | - | 0.713396 |
NA | RSP_0173 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase | chromosome 1 | CDS | 1889397 | 846 | - | 0.685579 |
NA | RSP_0635 | TRAP-T family transporter, DctQ (4 TMs) subunit | chromosome 1 | CDS | 2372531 | 519 | - | 0.606936 |
NA | RSP_2453 | putative oxidoreductase (NAD/NADP dependent) | chromosome 1 | CDS | 1094553 | 666 | - | 0.711712 |
NA | RSP_1993 | conserved hypothetical protein | chromosome 1 | CDS | 590153 | 477 | - | 0.691824 |
NA | RSP_1599 | AMP-binding protein | chromosome 1 | CDS | 196087 | 1650 | - | 0.669091 |
NA | RSP_0684 | Possible oxidoreductase; Short-chain dehydrogenase/reductase SDR | chromosome 1 | CDS | 2427604 | 810 | - | 0.676543 |
NA | RSP_0919 | Short-chain dehydrogenase/reductase SDR | chromosome 1 | CDS | 2668910 | 858 | + | 0.668998 |
NA | RSP_2321 | Putative TRAP-T family transporter, DctM (12TMs) subunit | chromosome 1 | CDS | 944312 | 1326 | - | 0.661388 |
NA | RSP_0194 | possible ABC transporter, substrate-binding protein | chromosome 1 | CDS | 1910241 | 471 | - | 0.66879 |
NA | RSP_2203 | hypothetical protein | chromosome 1 | CDS | 816645 | 507 | + | 0.692308 |
NA | RSP_0640 | putative N-methylhydantoinase A | chromosome 1 | CDS | 2378015 | 2019 | - | 0.705795 |
NA | RSP_1087 | Short-chain dehydrogenase/reductase family member | chromosome 1 | CDS | 2844837 | 738 | - | 0.682927 |
NA | RSP_0747 | Short-chain dehydrogenase/reductase | chromosome 1 | CDS | 2490768 | 723 | + | 0.655602 |
NA | RSP_2371 | 3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR | chromosome 1 | CDS | 997596 | 747 | + | 0.702811 |
NA | RSP_2655 | conserved hypothetical protein | chromosome 1 | CDS | 1298787 | 399 | - | 0.716792 |
NA | RSP_1562 | fumarylacetoacetate hydrolase family protein | chromosome 1 | CDS | 152005 | 687 | - | 0.692868 |
NA | RSP_0890 | possible protein yrbC precursor | chromosome 1 | CDS | 2640924 | 624 | - | 0.685897 |
NA | RSP_0230 | Neutral zinc metallopeptidase | chromosome 1 | CDS | 1948474 | 1596 | - | 0.678571 |
NA | RSP_2295 | conserved hypothetical protein | chromosome 1 | CDS | 918041 | 789 | + | 0.702155 |
NA | RSP_1041 | Malonyl CoA synthetase | chromosome 1 | CDS | 2802063 | 1506 | - | 0.702523 |
NA | RSP_1916 | possible 2-hydroxychromene-2-carboxylate isomerase | chromosome 1 | CDS | 514570 | 600 | - | 0.68 |
NA | RSP_2255 | Long-chain-fatty-acid--CoA ligase | chromosome 1 | CDS | 872149 | 1890 | + | 0.682011 |
NA | RSP_2091 | Putative benzoate transporter, BenE | chromosome 1 | CDS | 690398 | 1146 | - | 0.746946 |
NA | RSP_2459 | ABC transporter, inner membrane subunit | chromosome 1 | CDS | 1100179 | 783 | - | 0.701149 |
NA | RSP_2322 | TRAP-T family transporter, DctQ (4TMs) subunit | chromosome 1 | CDS | 945637 | 507 | - | 0.621302 |
NA | RSP_0226 | Naringenin-chalcone synthase | chromosome 1 | CDS | 1944352 | 1050 | + | 0.722857 |
NA | RSP_2858 | IndA involved in pigment biosynthesis | chromosome 1 | CDS | 1442231 | 912 | + | 0.716009 |
NA | RSP_2363 | Short-chain dehydrogenase/reductase | chromosome 1 | CDS | 990482 | 765 | + | 0.711111 |
NA | RSP_0914 | Short-chain dehydrogenase/reductase SDR | chromosome 1 | CDS | 2663533 | 753 | - | 0.723772 |
NA | RSP_2810 | ABC transporter, ATPase subunit | chromosome 1 | CDS | 1504712 | 774 | - | 0.671835 |
NA | RSP_2320 | TRAP-T family transporter, periplasmic binding protein | chromosome 1 | CDS | 943218 | 1038 | - | 0.643545 |
NA | RSP_1369 | Short-chain dehydrogenase/reductase SDR | chromosome 1 | CDS | 3146893 | 783 | + | 0.693487 |
NA | RSP_1946 | Cytochrome P450 hydroxylase | chromosome 1 | CDS | 543683 | 1182 | - | 0.713198 |
NA | RSP_6094 | TRAP-T family sorbitol/mannitol transporter, DctM (12TMs) subunit | chromosome 1 | CDS | 1809282 | 2049 | - | 0.697413 |
NA | RSP_0481 | possible 2-deoxy-D-gluconate 3-dehydrogenase | chromosome 1 | CDS | 2216678 | 726 | - | 0.702479 |
NA | RSP_1137 | Histone deacetylase family protein | chromosome 1 | CDS | 2899846 | 924 | - | 0.718615 |
PmtA | RSP_0721 | Phosphatidylethanolamine N-methyltransferase | chromosome 1 | CDS | 2466178 | 615 | + | 0.694309 |
acoR | RSP_2800 | Putative AcoR, Transcriptional activator of acetoin/glycerol metabolism | chromosome 1 | CDS | 1520106 | 1938 | + | 0.724458 |
acpP | RSP_2776 | Acyl carrier protein, AcpP | chromosome 1 | CDS | 1424176 | 267 | + | 0.629214 |
acpP | RSP_2463 | Acyl carrier protein (ACP) | chromosome 1 | CDS | 1103152 | 234 | + | 0.602564 |
acuC1 | RSP_2390 | putative Acetoin utilization protein | chromosome 1 | CDS | 1018710 | 1110 | + | 0.744144 |
btaB | RSP_0857 | S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase | chromosome 1 | CDS | 2607152 | 633 | + | 0.737757 |
cerI | RSP_0123 | Autoinducer synthesis protein | chromosome 1 | CDS | 1837350 | 633 | + | 0.63981 |
crtD | RSP_0266 | Methoxyneurosporene dehydrogenase | chromosome 1 | CDS | 1990681 | 1488 | + | 0.730511 |
crtF | RSP_0264 | Hydroxyneurosporene methyltransferase | chromosome 1 | CDS | 1988478 | 1140 | - | 0.715789 |
crtI | RSP_0271 | Phytoene dehydrogenase | chromosome 1 | CDS | 1994806 | 1557 | - | 0.672447 |
cypC | RSP_2378 | putative fatty acid beta hydroxylase (cytochrome P450) | chromosome 1 | CDS | 1005921 | 1323 | - | 0.702192 |
fabF | RSP_2464 | Beta-ketoacyl synthase; 3-oxoacyl-(acyl carrier protein) synthase II | chromosome 1 | CDS | 1103882 | 1263 | + | 0.692003 |
fabG | RSP_2538 | Short-chain dehydrogenase/reductase | chromosome 1 | CDS | 1182066 | 780 | + | 0.716667 |
fabG | RSP_2461 | 3-oxoacyl-(acyl-carrier protein) reductase | chromosome 1 | CDS | 1102236 | 738 | + | 0.692412 |
fixR | RSP_1067 | Short-chain alcohol dehydrogenase | chromosome 1 | CDS | 2824593 | 777 | - | 0.676963 |
fixU | RSP_0543 | hypothetical protein | chromosome 1 | CDS | 2280582 | 216 | - | 0.666667 |
fliH | RSP_1311 | putative flagellar biosynthesis/type III secretory pathway protein | chromosome 1 | CDS | 3084425 | 591 | - | 0.693739 |
gno | RSP_2160 | Short-chain dehydrogenase/reductase | chromosome 1 | CDS | 764032 | 765 | - | 0.71634 |
hutI | RSP_2934 | Imidazolone-5-propionate hydrolase | chromosome 1 | CDS | 1612029 | 1188 | + | 0.719697 |
linC | RSP_2039 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (2,5-DDOL dehydrogenase) | chromosome 1 | CDS | 634626 | 753 | + | 0.636122 |
pncA | RSP_1368 | probable pyrazinamidase/nicotinamidase | chromosome 1 | CDS | 3146095 | 606 | - | 0.69967 |
smoM | RSP_0097 | TRAP-T family sorbitol/mannitol transporter, periplasmic binding protein, SmoM | chromosome 1 | CDS | 1808034 | 1098 | + | 0.649363 |
smoS | RSP_0095 | Sorbitol dehydrogenase | chromosome 1 | CDS | 1805274 | 771 | + | 0.696498 |
ucpA | RSP_2029 | Short-chain dehydrogenase/reductase | chromosome 1 | CDS | 627382 | 780 | + | 0.734615 |
ucpA | RSP_0174 | short-chain dehydrogenase | chromosome 1 | CDS | 1890252 | 741 | - | 0.711201 |