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2024-05-16 17:29:27

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: megaplasmid

Number of genes found: 27

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPOA0265 TRAP transporter, DctP family, putativemegaplasmid CDS291001 1065 - 0.596244
NA SPOA0264 TRAP transporter, DctQ familymegaplasmid CDS290411 534 - 0.559925
NA SPOA0128 oxidoreductase, short chain dehydrogenase/reductase familymegaplasmid CDS137909 1239 - 0.650525
NA SPOA0025 fumarylacetoacetate hydrolase family proteinmegaplasmid CDS21241 852 - 0.653756
NA SPOA0333 TRAP dicarboxylate transporter, DctM subunitmegaplasmid CDS374238 1266 - 0.57504
NA SPOA0360 multicopper oxidase, putativemegaplasmid CDS402425 1431 + 0.671558
NA SPOA0282 long-chain-fatty-acid--CoA ligase, putativemegaplasmid CDS309822 1518 - 0.65415
NA SPOA0406 D-beta-hydroxybutyrate dehydrogenase, putativemegaplasmid CDS451660 759 - 0.675889
NA SPOA0117 Asp/Glu/hydantoin racemase family proteinmegaplasmid CDS121973 777 + 0.6139
NA SPOA0334 TRAP dicarboxylate family transporter, DctQ subunitmegaplasmid CDS375570 561 - 0.55615
NA SPOA0263 TRAP transporter, DctM subunitmegaplasmid CDS289097 1311 - 0.592677
NA SPOA0024 2-oxo-hepta-3-ene-1,7-dioic acid hydratase, putativemegaplasmid CDS20444 801 - 0.657928
NA SPOA0096 histone deacetylase/AcuC/AphA family proteinmegaplasmid CDS96657 1035 - 0.64058
NA SPOA0126 oxidoreductase, short chain dehydrogenase/reductase familymegaplasmid CDS136399 726 - 0.607438
NA SPOA0162 TRAP dicarboxylate family transporter, DctP subunitmegaplasmid CDS177943 1035 - 0.631884
NA SPOA0160 TRAP dicarboxylate transporter, DctM subunitmegaplasmid CDS176064 1323 - 0.615268
NA SPOA0155 type I secretion target repeat proteinmegaplasmid CDS167176 4437 - 0.620014
NA SPOA0130 AMP-binding enzyme family proteinmegaplasmid CDS140319 1620 - 0.609259
NA SPOA0449 phytanoyl-CoA dioxygenase family proteinmegaplasmid CDS1 798 + 0.662907
NA SPOA0116 fumarylacetoacetate hydrolase family proteinmegaplasmid CDS121054 918 + 0.637255
NA SPOA0131 aromatic 1,2-dioxygenase, beta subunitmegaplasmid CDS141940 474 - 0.586498
copA SPOA0370 copper resistance protein Amegaplasmid CDS413692 1944 - 0.626543
fabB SPOA0440 3-oxoacyl-(acyl-carrier-protein) synthasemegaplasmid CDS486694 1230 - 0.646341
gtdA-2 SPOA0115 gentisate 1,2-dioxygenasemegaplasmid CDS119912 1125 + 0.631111
pcaG SPOA0043 protocatechuate 3,4-dioxygenase alpha subunitmegaplasmid CDS38404 621 - 0.661836
pcaH SPOA0044 protocatechuate 3,4-dioxygenase beta subunitmegaplasmid CDS39088 729 - 0.62963
pmtA SPOA0294 phosphatidylethanolamine N-methyltransferasemegaplasmid CDS323640 621 + 0.565217