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2024-04-29 16:32:42

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Phage Gifsy-1

Number of genes found: 78

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Phage Gifsy-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC2018 putative cytoplasmic proteinchromosome CDS2114698 327 - 0.409786
acp SC1144 Acyl carrier protein (ACP)chromosome CDS1260171 237 + 0.476793
bioC SC0794 biotin biosynthesis; reaction prior to pimeloyl CoAchromosome CDS890976 756 + 0.596561
caiC SC0065 crotonobetaine/carnitine-CoA ligasechromosome CDS76645 1554 - 0.51094
cueO SC0168 putative multicopper oxidasechromosome CDS192642 1611 + 0.563625
dlhH SC3865 putative dienelactone hydrolase familychromosome CDS4108025 813 - 0.573186
entA SC0629 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS702475 756 + 0.583333
entB SC0628 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatasechromosome CDS701618 858 + 0.567599
entC SC0626 isochorismate synthetase, enterochelin biosynthesischromosome CDS698878 1107 + 0.585366
entD SC0615 enterochelin synthetase, component D (phoshpantetheinyltransferase)chromosome CDS683361 705 - 0.556028
entE SC0627 2,3-dihydroxybenzoate-AMP ligasechromosome CDS699994 1611 + 0.572936
entF SC0619 enterobactin synthetase, component F (nonribosomal peptide synthetase)chromosome CDS688015 3885 + 0.588932
eutM SC2461 putative detox protein in ethanolamine utilizationchromosome CDS2589814 291 - 0.61512
eutN SC2460 putative detox protein in ethanolamine utilizationchromosome CDS2589414 288 - 0.572917
faaH SC0376 putative fumarylacetoacetate (FAA) hydrolasechromosome CDS419375 879 + 0.499431
fabB SC2380 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2503032 1215 - 0.571193
fabF SC1145 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1260493 1242 + 0.550725
fabG SC1143 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1259281 735 + 0.50068
fadD SC1811 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)chromosome CDS1930394 1542 - 0.523995
fst SC2194 putative flutathione S-transferasechromosome CDS2296146 702 - 0.545584
gdo SC2195 putative 1,2-dioxygenase proteinchromosome CDS2296863 1038 - 0.565511
hpaB SC1049 4-hydroxyphenylacetate catabolismchromosome CDS1165150 1563 - 0.526551
hpaG SC1051 4-hydroxyphenylacetate catabolismchromosome CDS1167645 1290 + 0.558915
hpaH SC1055 4-hydroxyphenylacetate catabolismchromosome CDS1171773 804 + 0.588308
hutI SC0785 Imidazolonepropionasechromosome CDS880429 1263 + 0.581948
iacp SC2813 putative acyl carrier proteinchromosome CDS2977940 249 - 0.389558
idnO SC4339 5-keto-D-gluconate-5-reductasechromosome CDS4641150 765 - 0.534641
kduD SC2956 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3137265 762 - 0.515748
menE SC2305 o-succinylbenzoate-CoA ligasechromosome CDS2425952 1368 - 0.597953
menF SC2310 isochorismate synthase (isochorismate hydroxymutase 2), menaquinone biosynthesischromosome CDS2431661 1296 - 0.568673
pduA SC2046 Propanediol utilization: polyhedral bodieschromosome CDS2138585 285 + 0.536842
pduC SC2048 Propanediol utilization: dehydratase, large subunitchromosome CDS2139697 1665 + 0.568168
pduE SC2050 Propanediol utilization: dehydratase, small subunitchromosome CDS2142061 522 + 0.570881
pduJ SC2053 Propanediol utilization: polyhedral bodieschromosome CDS2144789 276 + 0.557971
pduK SC2054 Propanediol utilization: polyhedral bodieschromosome CDS2145068 483 + 0.554865
pduL SC2055 Propanediol utilizationchromosome CDS2145550 633 + 0.598736
pduN SC2057 Propanediol utilization: polyhedral bodieschromosome CDS2146674 276 + 0.608696
pduT SC2062 Propanediol utilization: polyhedral bodieschromosome CDS2151839 330 + 0.545455
pduX SC2067 Propanediol utilizationchromosome CDS2154006 903 + 0.55371
pncA SC1315 nicotinamidase/ pyrazinamidasechromosome CDS1412134 624 - 0.570513
rrmA SC1829 23S rRNA m1G745 methyltransferasechromosome CDS1947884 810 - 0.561728
slsA SC3682 putative inner membrane proteinchromosome CDS3898353 681 + 0.522761
smtA SC0949 S-adenosylmethionine-dependentmethyltransferasechromosome CDS1062668 804 + 0.549751
srlD SC2768 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2934638 780 + 0.547436
stcD SC2164 putative outer membrane lipoproteinchromosome CDS2265349 1008 - 0.411706
sufI SC3116 suppressor of ftsI, putative periplasmic proteinchromosome CDS3295229 1413 - 0.585987
tehB SC1605 paral putative methyltransferase; tellurite resistancechromosome CDS1711518 597 - 0.499162
ucpA SC2444 putative oxidoreductasechromosome CDS2572350 792 - 0.537879
yafE SC0255 putative methyltransferase in menaquinone/biotin biosynthesischromosome CDS295006 771 + 0.520104
yafS SC0258 putative SAM-dependent methyltransferasechromosome CDS298061 723 + 0.510373
ybbA SC0548 putative ABC superfamily (atp_bind) transporterchromosome CDS610796 687 + 0.590975
ybbO SC0546 putative oxidoreductasechromosome CDS609286 771 - 0.546044
ybbP SC0549 putative inner membrane proteinchromosome CDS611479 2415 + 0.580538
ybcY SC1634 putative SAM-dependent methyltransferaseschromosome CDS1742046 663 + 0.466063
ybdB SC0630 putative protein PaaI, possibly involved in aromatic compounds catabolismchromosome CDS703233 414 + 0.603865
ycaC SC0904 Homolog of slsA in STMchromosome CDS1011610 678 - 0.541298
ycgM SC1805 putative Fumarylacetoacetate (FAA) hydrolase familychromosome CDS1926132 660 - 0.533333
yciK SC1714 putative oxoacyl-(acyl carrier protein) reductasechromosome CDS1827501 762 + 0.566929
yczH SC4361 putative dienelactone hydrolasechromosome CDS4667706 675 - 0.536296
ydcO SC1603 putative benzoate membrane transport proteinchromosome CDS1709394 1239 + 0.567393
ydiD SC1369 Homolog of a plant pathogenicity factorchromosome CDS1466297 1686 - 0.527877
ydiI SC1386 putative protein PaaI, possibly involved in aromatic compounds catabolismchromosome CDS1486979 411 + 0.569343
yecD SC1910 putative isochorismatasechromosome CDS2019789 567 + 0.555556
yecO SC1913 putative SAM-dependent methyltransferaseschromosome CDS2021659 744 + 0.530914
yecP SC1914 putative enzymechromosome CDS2022399 972 + 0.552469
yghA SC3099 putative oxidoreductasechromosome CDS3278037 885 + 0.564972
yhbL SC3265 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3444354 654 - 0.568807
yhiQ SC3522 putative SAM-dependent methyltransferasechromosome CDS3717306 759 - 0.620553
yigI SC3855 putative protein PaaI, possibly involved in aromatic compounds catabolismchromosome CDS4095233 486 - 0.563786
yjcS SC1867 putative hydrolasechromosome CDS1978287 1980 - 0.496465
yjgI SC1669 putative short-chain alcohol dehydrogenasechromosome CDS1781129 714 + 0.571429
yjhP SC4356 putative SAM-dependent methyltransferasechromosome CDS4662789 1632 - 0.546569
yohF SC2187 putative oxidoreductasechromosome CDS2290516 762 - 0.549869
yojI SC2267 putative ABC-type multidrug/protein/lipid transport system, ATPase componentchromosome CDS2375046 1644 - 0.551095
yrbC SC3248 putative ABC superfamily (atp&memb), transport proteinchromosome CDS3431688 636 - 0.531447
yrbD SC3249 putative ABC superfamily (bind_prot) transport proteinchromosome CDS3432342 552 - 0.512681
yrbE SC3250 putative ABC superfamily (membr) transport proteinchromosome CDS3432898 783 - 0.57599
yrbF SC3251 putative ABC superfamily (atp_bind) transport proteinchromosome CDS3433688 813 - 0.580566