Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Chromobacterium violaceum ATCC 12472, ATCC 12472
Number of genes found: 108
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Chromobacterium violaceum ATCC 12472, ATCC 12472 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | CV2689 | probable oxidoreductase, short-chain dehydrogenase/reductase family | SubName: Full=Probable oxidoreductase, short-chain dehydrogenase/reductase family; | chromosome | CDS | 2911985 | 837 | - | 0.666667 |
NA | CV1782 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1937306 | 1188 | + | 0.703704 |
NA | CV2656 | probable cytochrome P450 hydroxylase | SubName: Full=Probable cytochrome P450 hydroxylase; | chromosome | CDS | 2867614 | 1407 | - | 0.685856 |
NA | CV3406 | probable oxidoreductase | SubName: Full=Probable oxidoreductase; | chromosome | CDS | 3699956 | 741 | - | 0.71525 |
NA | CV4239 | probable amidase from nicotinamidase family | SubName: Full=Probable amidase from nicotinamidase family; | chromosome | CDS | 4575986 | 525 | + | 0.674286 |
NA | CV0131 | probable benzoate membrane transport protein | SubName: Full=Probable benzoate membrane transport protein; | chromosome | CDS | 144569 | 1206 | - | 0.752902 |
NA | CV0170 | probable methyl transferase | SubName: Full=Probable methyl transferase; EC=2.1.1.-; | chromosome | CDS | 179974 | 729 | - | 0.680384 |
NA | CV2968 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3247165 | 984 | + | 0.660569 |
NA | CV3948 | probable 3-oxoacyl-[acyl-carrier-protein] synthase II | SubName: Full=Probable 3-oxoacyl-[acyl-carrier-protein] synthase II; EC=2.3.1.41; | chromosome | CDS | 4269038 | 1170 | - | 0.754701 |
NA | CV0463 | conserved hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; | chromosome | CDS | 477132 | 777 | - | 0.707851 |
NA | CV0804 | probable taurine dioxygenase | SubName: Full=Probable taurine dioxygenase; EC=1.14.11.17; | chromosome | CDS | 828109 | 843 | + | 0.58363 |
NA | CV2258 | probable short-chain dehydrogenase | SubName: Full=Probable short-chain dehydrogenase; EC=1.1.1.140; | chromosome | CDS | 2447781 | 846 | + | 0.594563 |
NA | CV2749 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2985759 | 771 | - | 0.688716 |
NA | CV1541 | probable 3-oxoacyl-[acyl-carrier-protein] synthase II | SubName: Full=Probable 3-oxoacyl-[acyl-carrier-protein] synthase II; EC=2.3.1.41; | chromosome | CDS | 1658228 | 1251 | + | 0.59952 |
NA | CV2803 | probable peptide synthetase protein | SubName: Full=Probable peptide synthetase protein; | chromosome | CDS | 3047256 | 9516 | - | 0.672236 |
NA | CV3733 | probable oxidoreductase | SubName: Full=Probable oxidoreductase; | chromosome | CDS | 4030092 | 2496 | - | 0.714343 |
NA | CV1221 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1282361 | 747 | + | 0.425703 |
NA | CV4378 | probable phosphatidylethanolamine N-methyltransferase | SubName: Full=Probable phosphatidylethanolamine N-methyltransferase; EC=2.1.1.17; | chromosome | CDS | 4720398 | 618 | - | 0.695793 |
NA | CV2261 | probable acetylserotonin O-methyltransferase | SubName: Full=Probable acetylserotonin O-methyltransferase; EC=2.1.1.4; | chromosome | CDS | 2450052 | 1026 | + | 0.575049 |
NA | CV2300 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2488462 | 441 | + | 0.634921 |
NA | CV0097 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 110768 | 822 | - | 0.63017 |
NA | CV1284 | probable hydrolase | SubName: Full=Probable hydrolase; | chromosome | CDS | 1350713 | 654 | + | 0.675841 |
NA | CV1902 | probable hydrolase | SubName: Full=Probable hydrolase; | chromosome | CDS | 2067943 | 552 | + | 0.643116 |
NA | CV0609 | conserved hypothetical protein | RecName: Full=Flagellar brake protein YcgR; AltName: Full=Cyclic di-GMP binding protein YcgR; | chromosome | CDS | 644971 | 741 | + | 0.614035 |
NA | CV2177 | probable dehydrogenase | SubName: Full=Probable dehydrogenase; | chromosome | CDS | 2349466 | 753 | + | 0.682603 |
NA | CV0446 | probable ABC superfamily, transport protein | SubName: Full=Probable ABC superfamily, transport protein; | chromosome | CDS | 463863 | 636 | - | 0.658805 |
NA | CV1115 | probable short-chain alcohol dehydrogenase | SubName: Full=Probable short-chain alcohol dehydrogenase; | chromosome | CDS | 1167435 | 597 | - | 0.700167 |
NA | CV3951 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 4271895 | 339 | - | 0.646018 |
NA | CV2802 | probable peptide synthetase protein | SubName: Full=Probable peptide synthetase protein; | chromosome | CDS | 3036595 | 10665 | - | 0.67745 |
NA | CV2976 | probable oxidoreductase | SubName: Full=Probable oxidoreductase; | chromosome | CDS | 3253402 | 762 | - | 0.671916 |
NA | CV0516 | probable calcium binding hemolysin | SubName: Full=Probable calcium binding hemolysin; | chromosome | CDS | 544108 | 5832 | + | 0.661866 |
NA | CV1741 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1891011 | 600 | + | 0.685 |
NA | CV3284 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3576183 | 711 | + | 0.661041 |
NA | CV0971 | probable fumarylacetoacetate hydrolase | SubName: Full=Probable fumarylacetoacetate hydrolase; | chromosome | CDS | 1005052 | 978 | + | 0.674847 |
NA | CV2707 | probable short chain dehydrogenase | SubName: Full=Probable short chain dehydrogenase; EC=1.1.1.100; | chromosome | CDS | 2930934 | 759 | + | 0.685112 |
NA | CV0392 | probable transcription regulator protein | SubName: Full=Probable transcription regulator protein; | chromosome | CDS | 406608 | 1785 | - | 0.74958 |
NA | CV3474 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3766899 | 771 | - | 0.657588 |
NA | CV3201 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3484510 | 513 | + | 0.664717 |
NA | CV3947 | probable 3-oxoacyl-(acyl-carrier protein) reductase | SubName: Full=Probable 3-oxoacyl-(Acyl-carrier protein) reductase; EC=1.1.1.100; | chromosome | CDS | 4268204 | 765 | - | 0.717647 |
NA | CV1232 | hypothetical protein | chromosome | CDS | 1294332 | 594 | - | 0.654882 | |
NA | CV3734 | probable ATP-binding component, ABC transporter | SubName: Full=Probable ATP-binding component, ABC transporter; | chromosome | CDS | 4032584 | 699 | - | 0.688126 |
NA | CV3204 | probable carboxymethylenebutenolidase | SubName: Full=Probable carboxymethylenebutenolidase; EC=3.1.1.45; | chromosome | CDS | 3486976 | 846 | + | 0.691489 |
NA | CV1780 | probable long chain fatty-acid CoA ligase | SubName: Full=Probable long chain fatty-acid CoA ligase; EC=6.2.1.3; | chromosome | CDS | 1934846 | 1689 | + | 0.653641 |
NA | CV1255 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1320899 | 765 | + | 0.667974 |
NA | CV0461 | probable cytochrome P-450 | SubName: Full=Probable cytochrome P-450; | chromosome | CDS | 475702 | 1095 | + | 0.73516 |
NA | CV1543 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1660304 | 270 | + | 0.540741 |
NA | CV0334 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 350842 | 963 | + | 0.599169 |
NA | CV2299 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2487998 | 468 | + | 0.65812 |
NA | CV0394 | probable methyltransferase protein | SubName: Full=Probable methyltransferase protein; EC=2.1.1.-; | chromosome | CDS | 410546 | 657 | + | 0.70624 |
NA | CV3643 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3939933 | 1497 | - | 0.690715 |
NA | CV1357 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1428444 | 642 | + | 0.658879 |
NA | CV3953 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 4273307 | 1182 | - | 0.70643 |
NA | CV3949 | probable 3-oxoacyl-[acyl-carrier-protein] synthase II | SubName: Full=Probable 3-oxoacyl-[acyl-carrier-protein] synthase II; EC=2.3.1.41; | chromosome | CDS | 4270200 | 1230 | - | 0.71626 |
NA | CV3633 | probable hydrolase, isochorismatase family | SubName: Full=Probable hydrolase, isochorismatase family; | chromosome | CDS | 3933980 | 552 | + | 0.668478 |
NA | CV0449 | probable ABC transport system ATP-binding protein | SubName: Full=Probable ABC transport system ATP-binding protein; | chromosome | CDS | 465827 | 819 | - | 0.677656 |
NA | CV2181 | probable dehydrogenase/reductase oxireductase protein | SubName: Full=Probable dehydrogenase/reductase oxireductase protein; EC=1.-.-.-; | chromosome | CDS | 2353844 | 753 | - | 0.707835 |
NA | CV0447 | probable ABC transport system substrate-binding protein | SubName: Full=Probable ABC transport system substrate-binding protein; | chromosome | CDS | 464570 | 468 | - | 0.621795 |
NA | CV4132 | probable pteridine reductase | SubName: Full=Probable pteridine reductase; EC=1.5.1.33; | chromosome | CDS | 4472107 | 759 | - | 0.71805 |
NA | CV0448 | probable ABC transport system permease protein | SubName: Full=Probable ABC transport system permease protein; | chromosome | CDS | 465049 | 774 | - | 0.682171 |
NA | CV0785 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 810067 | 597 | - | 0.654941 |
NA | CV1613 | probable 3-demethylubiquinone-9 3-methyltransferase | SubName: Full=Probable 3-demethylubiquinone-9 3-methyltransferase; | chromosome | CDS | 1740432 | 801 | + | 0.700375 |
NA | CV3558 | probable acetylpolyamine aminohydrolase | SubName: Full=Probable acetylpolyamine aminohydrolase; | chromosome | CDS | 3865541 | 1032 | - | 0.676357 |
NA | CV3227 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3509317 | 1317 | + | 0.697798 |
NA | CV1545 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1661486 | 1536 | + | 0.633464 |
NA | CV2028 | Conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2209987 | 741 | + | 0.692308 |
NA | CV0297 | probable short-chain dehydrogenase/reductase | SubName: Full=Probable short-chain dehydrogenase/reductase; | chromosome | CDS | 299983 | 618 | - | 0.70712 |
NA | CV1320 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1390329 | 594 | + | 0.673401 |
NA | CV1546 | probable 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=Probable 3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; | chromosome | CDS | 1663046 | 747 | + | 0.625167 |
NA | CV3888 | probable methyltransferase | SubName: Full=Probable methyltransferase; | chromosome | CDS | 4195144 | 1155 | - | 0.712554 |
NA | CV2788 | probable isomerase | SubName: Full=Probable isomerase; | chromosome | CDS | 3021901 | 651 | - | 0.655914 |
NA | CV3520 | probable acetoacetate decarboxylase | RecName: Full=Probable acetoacetate decarboxylase; Short=AAD; Short=ADC; EC=4.1.1.4; | chromosome | CDS | 3817570 | 741 | - | 0.635628 |
NA | CV2326 | probable histone deacetylase/AcuC/AphA family protein | SubName: Full=Probable histone deacetylase/AcuC/AphA family protein; | chromosome | CDS | 2518038 | 909 | - | 0.686469 |
NA | CV2799 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3033775 | 1320 | - | 0.637121 |
NA | CV2810 | probable oxidoreductase | SubName: Full=Probable oxidoreductase; | chromosome | CDS | 3062459 | 708 | - | 0.707627 |
NA | CV0540 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 577139 | 573 | + | 0.705061 |
NA | CV3396 | probable methyltransferase | SubName: Full=Probable methyltransferase; | chromosome | CDS | 3690642 | 837 | - | 0.620072 |
NA | CV0865 | probable dipeptidyl aminopeptidase | SubName: Full=Probable dipeptidyl aminopeptidase; | chromosome | CDS | 894588 | 1242 | - | 0.701288 |
NA | CV2660 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2873763 | 417 | - | 0.589928 |
NA | CV0718 | probable polyhydroxybutyrate depolymerase | SubName: Full=Probable polyhydroxybutyrate depolymerase; | chromosome | CDS | 744627 | 1206 | - | 0.672471 |
acpP | CV3413 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 3707206 | 276 | - | 0.528986 |
alkK | CV0898 | acyl-CoA synthetase | SubName: Full=Acyl-CoA synthetase; EC=6.2.1.-; | chromosome | CDS | 925461 | 1629 | + | 0.672805 |
aniA | CV2007 | nitrite reductase | SubName: Full=Nitrite reductase; EC=1.7.2.1; | chromosome | CDS | 2188174 | 1479 | + | 0.659229 |
bdhA | CV0695 | 3-hydroxybutyrate dehydrogenase | SubName: Full=3-hydroxybutyrate dehydrogenase; EC=1.1.1.30; | chromosome | CDS | 721236 | 783 | - | 0.655172 |
bioC | CV4376 | biotin synthesis protein | RecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; | chromosome | CDS | 4718704 | 909 | - | 0.669967 |
cbsF | CV2233 | synthetase CbsF | SubName: Full=Synthetase CbsF; | chromosome | CDS | 2410977 | 8580 | + | 0.711655 |
cviI | CV4091 | N-acyl homoserine synthase; autoinducer synthase, quorum sensing controlled system | RecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; | chromosome | CDS | 4426967 | 654 | - | 0.58104 |
entA | CV1482 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | SubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; EC=1.3.1.28; | chromosome | CDS | 1579729 | 765 | - | 0.730719 |
entB | CV1483 | isochorismatase | SubName: Full=Isochorismatase; EC=3.3.2.1; | chromosome | CDS | 1580496 | 879 | - | 0.676906 |
entC | CV1485 | isochorismate synthase EntC / MenF | SubName: Full=Isochorismate synthase EntC / MenF; EC=5.4.4.2; | chromosome | CDS | 1582984 | 1179 | - | 0.703986 |
entD | CV2650 | enterobactin synthetase component D /phosphopantetheinyl transferase | SubName: Full=Enterobactin synthetase component D /phosphopantetheinyl transferase; | chromosome | CDS | 2863663 | 714 | - | 0.672269 |
entE | CV1484 | 2,3-dihydroxybenzoate-AMP ligase | SubName: Full=2,3-dihydroxybenzoate-AMP ligase; EC=6.3.2.-; | chromosome | CDS | 1581380 | 1608 | - | 0.703358 |
entF | CV1486 | enterobactin synthetase component F | SubName: Full=Enterobactin synthetase component F; | chromosome | CDS | 1584375 | 3243 | - | 0.73913 |
fabF | CV3412 | 3-oxoacyl-[acyl-carrier-protein] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 3705799 | 1242 | - | 0.673108 |
fabG1 | CV3414 | 3-oxoacyl-(acyl-carrier-protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; EC=1.1.1.100; | chromosome | CDS | 3707556 | 738 | - | 0.666667 |
fabG2 | CV3576 | 3-oxoacyl-(acyl-carrier protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier protein) reductase; EC=1.1.1.100; | chromosome | CDS | 3883964 | 741 | - | 0.620783 |
fadD1 | CV0093 | long chain fatty-acid CoA ligase | SubName: Full=Long chain fatty-acid CoA ligase; EC=6.2.1.3; | chromosome | CDS | 105298 | 1656 | + | 0.702295 |
fadD2 | CV1459 | long chain fatty-acid CoA ligase | SubName: Full=Long chain fatty-acid CoA ligase; EC=6.2.1.3; | chromosome | CDS | 1547013 | 1680 | - | 0.644643 |
hda | CV3686 | histone deacetylase | SubName: Full=Histone deacetylase; | chromosome | CDS | 3987918 | 960 | + | 0.667708 |
hetM | CV4293 | polyketide synthase | SubName: Full=Polyketide synthase; | chromosome | CDS | 4633127 | 1197 | - | 0.507937 |
hmgA | CV0970 | homogentisate 1,2-dioxygenase | SubName: Full=Homogentisate 1,2-dioxygenase; EC=1.13.11.5; | chromosome | CDS | 1003743 | 1134 | + | 0.671958 |
hutI | CV0321 | imidazolonepropionase | RecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; | chromosome | CDS | 338515 | 1242 | + | 0.698068 |
iacP | CV2615 | acyl carrier protein | SubName: Full=Acyl carrier protein; | chromosome | CDS | 2822032 | 231 | - | 0.645022 |
phaB | CV2364 | acetoacetyl-CoA reductase | SubName: Full=Acetoacetyl-CoA reductase; EC=1.1.1.36; | chromosome | CDS | 2549913 | 741 | - | 0.603239 |
phaZ2 | CV0729 | poly (3-hydroxybutyrate) depolymerase | SubName: Full=Poly (3-hydroxybutyrate) depolymerase; EC=3.1.1.75; | chromosome | CDS | 751672 | 1056 | - | 0.670455 |
pncA | CV1264 | bifunctional pyrazinamidase/nicotinamidase | SubName: Full=Bifunctional pyrazinamidase/nicotinamidase; EC=3.5.1.19; | chromosome | CDS | 1328492 | 633 | - | 0.661927 |
tauD | CV2855 | taurine dioxygenase | SubName: Full=Taurine dioxygenase; EC=1.14.11.17; | chromosome | CDS | 3112847 | 834 | - | 0.677458 |
tehB | CV3428 | tellurite resistance protein | SubName: Full=Tellurite resistance protein; | chromosome | CDS | 3722791 | 681 | - | 0.622614 |
ucpA | CV1046 | oxidoreductase ucpA | SubName: Full=Oxidoreductase ucpA; | chromosome | CDS | 1096266 | 765 | + | 0.715033 |