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# Rhodoferax ferrireducens DSM 15236, DSM 15236

>Rfer_0859 ABC transporter related
MQNDTQAQIVVDALVKRFGSFVAVDGVSFEVGRGEVMGFIGPNGAGKSTL
IRILCGLLRPSAGRALVAGIDVAQDPEGVRRRIGYMSQKFSLYNDMSVVE
NLRFFGGVYGVSRADISARLRFAVDMAGLTGREDALVATLAGGWKQRLAL
GAAILHRPTILFLDEPTSGVDPSSRRRFWELIHALAQDGVSVLVSTHYMD
EAEYCHRVALINHGRLIALGTPLELRQHALGGELLVIEGNSIGDAMTQIG
QAPGVLDVAIFGSVLHALVDQAALRSPELLELLTTTGRTDVRMRRIAPSL
EDSFVHLVRASAATAGAAA
>Rfer_0699 AMP-dependent synthetase and ligase
MIFSLISMTESTLLPELITLAAQRTPQAIALTSGTSHLSYAELSTSVSQF
AAGLLGLGLDRGERVAIYLEKRFETVIASFGAPAAGAVFVPVNPLLKPEQ
VAFILRDCNVRVLVTSPERLALMKEMLAECHDLRHVVVTDAVVPSTPVDF
TLPGPLALVSWRDLLSSPARPGHRVIDVDMVAILYTSGSTGRPKGVVLSH
RNMVAGAKSVASYLENRPEDVLLAALPLSFDAGFSQLTTAFHAGARVVLL
NYLMPRDVLKAMEREKVTGLTAVPPLYIQLAQLDWPAAINENLRYFANTG
GRMPRETLNLLRQRVPQAKPFLMYGLTEAFRSTYLPPDEVDRRPDSIGKA
IPNAEILVLREDGSACSPEEPGELVHRGALVGMGYWNDTEKTAERYKLLA
SDAPGRQPGLQLPEYAVFSGDTVRKDAEGFLYFIGRRDEMMKTSGYRVSP
TEVEEILYATQMVGECVAFGVDHPSLGQAIQVIATNAVGTGARGLNDLMS
ECRARMPAYMVPAGIEIVAGPLPRNPNGKIDRKLLATEWLERHAA
>Rfer_1977 short-chain dehydrogenase/reductase SDR
MTSNSKVAIVTGAGSGIGKAAALALLAHGYRVVLAGRRSGPLAEVIALGA
APERALAVPTDVSDADSVKALFDATVSAFGRVDVLFNNAGVGAPAIALED
LTLAQWNNVVDINLTGMFLCIQQAFRVMKAQTPLGGRIINNGSISATTPR
PNSIAYTATKHAVTGLTKAASLDGRKYDIAVGQIDVGNAATEMAQRMATG
ILQANGDIAIEPLMDVNIVGQSVLYMANLPLEANVMFHTVMATKMPFAGR
G
>Rfer_4185 Methyltransferase type 11
MSDLNSKAKVFNAAMAPRLDKLYASPQIVEQRRRLRELILAKPGETGVDI
GCGLGHLSCELAREVMPGGRLLAIDVSADMVAGVTERAQREGLADLIETR
LGDATALDLPDASVDFVVAVQSYSYVPNVEQAIAEAARVLRPGGRLAVLE
TDWDMCVYESEDAAQMRRIFDGRWRFAHWQLPRQLHRMFHNAGLRLDKTE
AYPLLETRYDPDSFGVGLIAIARNAAVRNGVNALEADAWVADICSRQRDG
EYFFCANRFMFVAVK
>Rfer_2567 fumarylacetoacetate (FAA) hydrolase
MPYVFNPAPVVSVPVVGSDARFPVHRIYCVGRNYEDHAKEMGFTGREPPF
FFMKPADAVLVVNAGETARLPYPSLTQNLHHEIELVVAIGTGGKNIRAAD
AHQHIFGYAVGLDMTRRDLQNEMKKQGRPWCIGKGFDASAPIGPITPAAA
AGDIAQAEIFLQVNGQDRQRSQVAKLIWSIAEVIEHLSAAWALQPGDLIY
TGTPEGVGAVVAGDTLHGGVTGLSAITLTVE
>Rfer_4204 AMP-dependent synthetase and ligase
MTTLTENILANLIANRAAEMPDFDVLTIEGAGVCPDEVRNYRDLWDNGRR
MAQVLLDLGVQPGHRFALLMANHAEFVEAMVAASIVGAVVVPIDPRAKGD
KLHFMLENAQCSGAFVADYALGNLQPLRVTLPGLRWVMGFATNEGTCPLS
DYPGFVDWVAAAPTNAPDLPVLTTDPDSPLELIFTSGTTGDPKGIVLTNR
RYCDTSLLAKRLFGYRDDDKLYSGLSLTHANAQIVTLGAALACKLRCVLS
RRFTKSRLWNITRKYGATSFTLLGGMTTAVYAELPKPDDAENPVRFVVSA
GMPAAIWGEFERRFNVQVLEFYGAAEGGLSFNHPGAGPVGSIGKVAPTLK
HRIVDDLGNDVPRGVPGELLFRHANGDPFVVEYFGNPDASTKKCAGGWLH
MGDVVHEDENGWLFFDYRKGNGIRRNGEFIDTTFIEKVIAESGLVDDVYV
YGIASANLVPGEKDVVAAVVAKNAVTFDPQQLFESCRGKLDASLLPGFIQ
VLAQIPKTASEKPQDRFLIDAFKQDSHAVYRRV
>Rfer_1812 protein of unknown function DUF938
MLITRGLQPIFVKNSDLYTYTMSQADFSPAAERNKQPILEVLRQMLPERG
SALEIASGTGQHVIWFAAHLPRWTWQPTDAQPGALSVIAQRVAQQGLTQV
RTPLLVDVMAPRWLAEDAQFDLIFCANMLHISPWASCAALMRGSAWHLAP
GGLLVTYGPYLEDEVPTAAGNLAFDQSLRAQNPDWGIRRREEVAQEATRA
GLQLTARHAMPANNLLLVWTRESESDPK
>Rfer_2437 short-chain dehydrogenase/reductase SDR
MKTVLITGANRGIGLEHVHRFAKRGIQVLAAVRSPTDAVELHKLADTPGN
FITVLPYDASDPAAPAGLKAALGDTSIDLLFANAGVMGERKQSFGSVDVE
EVLHLVRVNSLAPLKLAEALADNVANSANKLIALQSSQMGSIGDNSSGGY
YAYRVSKAALNMVAKSMSNDLRSRGVITVALHPGWVQTRMGGAGAPVTVA
QCVAGQQALFDRVTLLDSGHFFNYDGRELPW
>Rfer_0911 short-chain dehydrogenase/reductase SDR
MQTSPSIALVTGGSRGLGKSTALHLARQGHDVILTYRSKQAEANDVVAQI
EAMGQKAVALALNVSDSSSFAGFAAQVRDVLLAQGGRTTFNVLINNAGTG
THASLMDTTEVQFDELVNVHFKGAFFLTQKLLPLMADGGRIVNLSSGLTR
FALPGYAAYASMKGAVEVMTRYMAKELGPRGIAVNTVAPGAIATDFGGGA
VRDTPQLNAIVASQTALGRVGEADDIGAMVASLVSPANRWINAQRIEVSG
GMFV
>Rfer_0045 heme exporter protein CcmA
MKTVPTLSFSKLGCSRGGRQLFQNIDCVLESGHWLYVAGANGVGKTSLLR
MVCGLAPIESGEIFWNGTPIHAQADAYRQDLCYLGHLNALQESMTVHENL
AFTAALGGMAPDMAQTQSVLAHFGVAGRDRQLVRHLSQGQKRRVALSRLA
LSQARLWVLDEPFVAMDEAGVRMLADLIAAHLTQGGLAVLTSHQQVDIGA
IPAQLLELRA
>Rfer_1702 Secretion protein HlyD
MKNNVQWRRRLVLGLLAVLVAWGLFQGFRPQAVEMDMGTASRAALRVTLE
QEGRTRVLDRYVVTAPVTGYARRLRSEVGNAVERGAILVELEPLRAEALD
PRRRAEAQARIAAAESGVSATEQRARAAASSAELAQTELQRVRALRLQGH
VSAAAEDRAASEVQRSAADMRSAQFAVTTARHELEAARTTLKYAGSASNT
EPVTVRAPVAGRVLKIAHKSEGTVASGQPLVEIGDPAALEVEVDLLSADA
VRIHPGTRVVFERWGGEGSLEGVVRVIEPTGFTKVSALGVEEQRVWVIVA
FSSPATQWQRLGDGYRVEASFIVWEGKDILQIPASALFRDGDGWAAFVVE
QGKAVKRRVEIGQRTGLRAQVVSGIQAGERVINHPDDRVREGVSVVAR
>Rfer_0978 N-acyl-D-amino-acid deacylase
MQENFDLLIRNASIVDGTGAPRFTGDIGIRGERIARIGDLSKLRGALEID
LAGRIAAPGFIDAHTHDDRFMLSNPDMAPKISQGVTTVIGGNCGVSLAPM
PRPIPDPVTPPLNLLDGDGEWFRFPSFAAYLDALRAQPAATNCAMLVGHT
TLRVATMDDLTQPATPAEIGAMRELVDEAMRAGAIGVSTGLFYEPAIAAP
TEEIIEICRPLKEFNGLYCTHMRDEADRVLDSLEESFRIGREVGVPVVIS
HHKLVGQANYGRSEETLSFIEKNMAKQPICLDCYPYTAGSTILSADRAAT
STRVIVSWSKALPEHAGQDLADIAQKMGVSQDEAVQRLLPAGAIYFRMDE
ADVQRILKFDQTMIGSDGLPHDAAPHPRLWGSFARVLGHYGRLLGLFPLE
TAVHKMTGLTAKNFGLKDRGVLKEGAYADLTLFNADTVDEVATYEKPIAP
ARGIDTVIVNGAVVWRDGRSTGARPGRVLAREPQETGS
>Rfer_3139 beta-ketoacyl synthase
MNKQRVVVTGMGLVTPLGCGVETVWQRLAAGASGLRRLSDEFCRGLDAQV
GATVPSVQEDAEAGLDIDRVVSGKDQKKMDRFIVLALAAADQALQQAGWQ
AQSPHARERTATIIASGIGGFPAIAEAVRTTDLRGPRRLSPFTVPSFLIN
LAAGHVSLRYGFKGPIGAPVTACAASVQALGDGARLIRSGEADVVVCGGT
EAAINLVTQAGFAAARALSTGYNDCPTQASRPFDRNRDGFIVGEGAGVLV
IESLEHALARGAVPLAELVGYGTSADAYHITSGPEDGNGAARAMQIALRQ
AGISPNQVQHVNAHATSTQVGDAAELAAFRTVFGVPEESVGSPAKGPAIS
SSKSATGHLLGAAGAVEAIFTVMALRHQVAPPTLNLHEPDPLSKGMDLVQ
LYSRPVEMEYALSNGFGFGGVNASVVFRRWVD
>Rfer_0698 conserved hypothetical protein
MNISQEVLRVVDEVLSLNGRSATFTRDTPLLGAIPELDSMAVVTLITTLE
EQFGLVVDDDDIDGSTFATVGSLTDFVSSKLAT
>Rfer_4141 cytochrome P450
MSNMRSPDWDPKSAAVLRDQRAACDEMRERCPVAYSDLLGWSLFRHEDVV
RVLNDPDTFSNVVSRNLSVPNGMDPPEHGQYRRIIERYFAPQTMQAFEPQ
CSSIAADLVRSLRGRVALELMGDFAHPFAVRVQCAFLGWPASMHEPLRLW
AQKNHVATLAQDRPAMADIAHEFSGYVLGLLQPRRDAGIQGHQDVISSLT
SQQIKGRPLNDEEIISILRNWTVGEISTIAAAVGVVAQYLAEHTELQQQL
RTQPTLLPDAIEEILRMYGPLLANRRVTTRTVEIGGRTINAGERISLNWV
AANRDGLVFTDPQSFRLDRDASANLLYGAGIHVCPGAPLARMELRVAVRA
LLDGTTSIDPIAQRPPTSAVYPASGFATLPLHLTFPSQPSTHQR
>Rfer_0646 short-chain dehydrogenase/reductase SDR
MDIRNKVAIVTGGASGIGRAIAQRFAADGARAVVVADLNFERAQAVARDI
KGLAVRCDVSQEADIQALVATTRQHYGQVDAYISNAGILGNMGGLDLDDA
LWNRMWQIHSMAHVWAARAVVPEMVARGDGFFLVTASAAGLLTIVESAPY
AVTKHAAVAFAEWLRIAYGRKGVRVSCLCPQAVQTDMLTGDGGSASHDSI
ISPEQVANDVISTMLSDKFLVLPHPEVAQYFRNKGQDYERWIGGMQKMYA
RHAEGG
>Rfer_3769 Type I secretion membrane fusion protein, HlyD
MAWFNEKAFERTGALVKRAAGASEATFGPLIKRLTPVDEPDQLDWAGDAD
WARLQQEPLRAKRLLRLAAVALLVMVIWAAFAQIDEVTRGEARVVPTSQV
QIIQSVDGGVVEALLVHEGQIVEAGQLMLRVDPTRFVSNMLESRVGQLAL
QAKVLRLEALTRGTAFNPPAELMRDAPDVVAQEMRLYESRRAEINAQTFI
SQNQLVQRQQELNEVRARRDQAVRSLELMTKEINATRPMIATGAVSEVEV
LRLERQVAGLRGDSEQATAQISRVQSSILEATRKIEEVQLTSRNQMSAEL
SDAMSKLASLSQGGLALQDKVKHADIKSPVRGTVKRLLVNTVGAVVQPGK
EVVEVVPLDDTLILEVQITPKDIGFLRPEQEATVKFSAYDFSIYGGLTAD
VVNIGADSVLDEKGNAFYHVRVRTRKSSLGPSLPVIPGMVAQVDILTGKK
TVLSYLLKPVLRAKANAMTER
>Rfer_2229 Methyltransferase type 11
MMETLSPAPAIDLVALKQKQQATWSAGDYAVIGTTLQIVGETLCEALDLR
AKERVLDVAAGNGNATLAAARRWCDVVSTDYVGALLERGQARASAEGLAV
QFTEADAENLPYADGSFDVVLSTFGVMFTPNQERAANELARVCRPGGKIG
LANWTPPGFIGELFKLIGRYVPPPAGVKSAVLWGTEDRLRELFGESIATL
ETSRKNFVFRYRTPQHWLDTFRTYYGPMQKAFGAVDAAQQEALAADLLRL
VRQFNRADDGAMVVPGEYLEAVIKVR
>Rfer_4104 acriflavin resistance protein
MNVSAWSIRKPVPSVLLFIMLTLVGLMSFRAMKIQQFPDIDLPTVIVSAS
LPGAAPAQMETEVARKIENSLASIQGLKHLYTKVQDGMATVTAEFRLEKP
TQEAMDDVRDAVQRIRSDLPADLRDPAITKMDFAGMPVLTYTVSSSRMDD
EALSWFVDHQVSKAMLAVRGVGAVSRVGGVQREVRVELDPARLLALNATA
ADISRRLRDIQQDASGGRADLGGAEQSVRTIATVHSAQELGALEISLSDG
RRIRLDQVASVSDTVAEQRSTALLNGQTVVGFEITRSRGASEVEVANGVH
IALDKLKTEHPDVTITEAFNFVDPVIENYNGSLALMIEGAILAVIVVWLF
LREWRATFISAVALPLSIIPTFAVMHWLGFSVNVVTLLSLSLVVGILVDD
AIVEIENIMRHLGQGKSPFQAALEAADEIGLAVIATTFTLIAVFLPTAFM
AGVAGKFFVQFGWTAAIAVFFSLVVARMLTPMMAAYILKAPKKPHAEPVW
MKWYLRLAAWCLKHRLWTLIATVVFALGSCTPLFLGKIAGGFIPPDDLSQ
TQVYITLTPGSTFRQTLAVAEQARVIVQKNPHVKMVYTAVGGGKAGTDPF
LSAGAAEARKATLTINLTPRSERRGTSKQAIESDLRRALEAVPGARLNVG
FGGSSEKFMLVLAGEDGEALNAHAARVEKELRGIPGIGAVTSSSSLQRPE
LVVRPDNARAADLGVTSAAIADTLRIATAGDYDQGLAKLNFSQRQIPVVV
RLPDVARQDLPLLERLAIPGARGPVALGNVATLTIDSGPAQIDRYDRLRN
VNFEIELNGQPLGKVQAEADALPSLAKLPAGISKTAVGDAEAMGELFSSF
GLAMLTGVLCIYIVLVLLFHAWVQPVTILVALALSIPGAILALFITRTDL
TMPSMIGMIMLMGIATKNSILLVEYAIMARREHGLNRWDALLDACHKRAR
PIVMTTIAMGAGMLPIAIGFGTDPSFRAPMAIVVIGGLITSTFLSLLVIP
VVFTYVDDAVQGLGHLFRREHAGPSPQAARP
>Rfer_2845 AMP-dependent synthetase and ligase
MLQPGLMMDRPLLISDVIEHGAAQFGDVEVVSRETHGPLFRYTYAQCAAR
SRKLAHALKSLGLEAGSAVGSIAWNNHRHLEAYFAVSGSGMVMHTCNPRL
QAQQLIYIINHAEDAVMLFDATFAPLVKGIAAHCPKVKAWVCLSDVANMA
AVEGVSNVLCYEELIAPHSEQFDWPQFDERTGAALCYTSGTTGNPKGALY
SHRAIVLNAMSGCLPGILSLSPRDTVLPVVPMFHINAWCIPYAAPIGGSR
LVLPGPRLDGASLYELMETERVTVSAGVPTIWLGLMQHVEQHGLRFSSMR
RTAVGGSAMPASLIAKFADDYGVEVRHGWGMTETTAATTMSCLTPRDLEL
SPAQQHATIARQGKSVFGAEIKIVDEAGATLPRDGVSQGELMVRGQWIVT
GYYKGDRSPLVDGWFPTGDIATIDAHGVMQIRDRAKDVIKTGGEWISSID
LESAAMGHPAVAMAAVIGVKHPKWDERPLLFIVRKPGKAVEREEILAFLT
ERVAKWWVPDDVVFLDALPVGGTGKVQKGDLRKQYGGVFS
>Rfer_0298 cytochrome P450
MFSFDPYAPAVDANPFPFYKTLRDEHPCFWSPEADMWILSRYADIVSAGQ
DAQTYSSASGNLMTELPGRAGATLGTTDAPRHDRLRGLIQHAFMKRNLES
LSEPIRDIAREVAESLRGKKQFDFISEFSSKFTVRVLFAALGLPTGAEVT
VPESTVRDKAVMMVQSDPVTRTKGPEHIAAYNWMQDYAAGVIAERRASPR
NDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMAMFALNMAD
FADARRQCVANPALLADAVEESLRFNTSAQRFRRRLMKDVTLHGQTMKAG
DFVCLAYGSGNRDERQYPNPDAYDITRKPRGHLGFGGGVHACLGTAIARL
AVKIAFDEFHKVVPEYHRVQEQLPWMPSSTFRSPLVLELAVV
>Rfer_0216 Benzoate-CoA ligase family
MNASTTTDMPAVTPPGDSFNFAQHLLSCNSQRASKVAFIDDQGALSYGQL
NERVRRVAAGLRSLGIKREERVLLLMHDCNDWPVSFLGAMYAGIVPVAVN
TLLTADDYAYMLEHSRAQAVLVSGALLPALTAAMTKSDHEVGKVIVSRPV
APLHPAEVEYETFVQAQSPLLKPAATSPDDPGFWLYSSGSTGRPKGAVHS
HGNPYWTAELYGKAVLSLTERDTCFSAAKLFFAYGLGNALSFPMSVGATT
ILMAERATPDATFKRWLGQVGGVKPTVFYGAPTGFAGMLASPNLPARSDV
ALALVSSAGEALPAELGERFKRHFGVDIVDGIGSTEMLHIFLSNTPQRVR
YGTTGWPVPGYDIELRGEDGAAVPDGEPGDLYIHGPSAAMMYWGNRAKTR
ETFQGGWTKSGDKYVRNSDGSYTYGGRSDDMLKVSGIYVSPFEVEATLVQ
HPSVLEAAVIGVPDAQGLTKTKAFVVLKAGAQATEAELQAFVKDKLAPYK
YPRQIAFVDDLPKTATGKIQRFKLRELEAHAA
>Rfer_0861 secretion protein HlyD
MTSRTRKILAIAALLTLVLLATVWRTQLLALLKAKDETNVLSLSGNIEAH
ESVLGFKTVQSRIVELPFHEGQWVSKGTVLAVVDDADYRQQMAIAESNLA
VQKQQLEAARQNLYTAERTLLVDQAEVRQRQLDQQRALDLQQQGFTSKAT
LDQADTALKQASAVLQRDQSLQTAAARAIDVAKASVHSGEAAVALARIVL
SYTTLRAPFDGVVNVQQAEVGEIVVPGTPVLTLADLDHVWLRAYLNESDL
GRVRMGQEVSVSNDSDPNRRYQGRISFISEKAEFTPKSVETHAERVNLVY
RIKIDIANPEHELVPGMPADARIALHTAGS
>Rfer_3128 short-chain dehydrogenase/reductase SDR
MCQGRLEGKTVLITAAAQGIGRASALACAAEGARVIATDINQQFLDSLAA
EHAGIQVAQLDVRNDAAVTALAARTPALDALFNCAGMVANGSMLECSEAD
WDLSFDLNVKSMFRMTRAFMPAMLAKAQAENTSVSIINMASMASSIKGFA
NRCAYGATKAAVIGLTKSLAADYVKAGLRANALCPGTVDTPSLRGRIANA
ADPVQAEKDFIARQPMGRLATVTDITPMVVFLASDESRFVTGQTLLVDGG
VTI
>Rfer_2098 conserved hypothetical protein
MDKLSAATAHGLGPASSWVQRWSHLVARHGSVLDIACGQGRHMQWFAEQG
HAVTGIDRSPDAIRAASRIGEAVLADIENASWPLMHRGHARQFDAVIVTN
YLWRPLFEVMTQSVAPGGVLIYETFAQGHETVGKPSNPDFLLRPNELLTA
FKSLQIVAFEDGFLDHPPRYVQRIAAVRLDLGEETQQTPARYTL
>Rfer_2632 DSBA oxidoreductase
MIEFFFDCSSPWTYLAFHNLQPLAAELNEPVHWRPVLVGGIFNAVNPSVY
AMRDNPVPAKWAYMLKDLQDWAREAGLKIVFPPRVFPVNSVKAMRGCLWL
EPQGKLLPFATAVFEAYWAREEDISQDAVLLKICDQVGVDGGAFLAGIAQ
PAIKQQLKANTEEVIARGGFGSPTLYLGDDMYFGNDRLPLLKAAILRQRA
ASL
>Rfer_2283 AMP-dependent synthetase and ligase
MPADINPDLFTSIPDLLEKTATRFADRPAIHNLGHTISYAELERLTREFA
AFLQGLPGMAQGDRVAIMAPNLLQYPVALFGILRAGMVVVNVNPLYTPRE
VAHQLQDAGAKAIVIVENFAAVLQRVLSNTPLKHVITTQVGDLLPWPRRS
LINFVIKKVKKMVPAWRIDGAIGFRAALARGARSSFKPVQVKREDIAFLQ
YTGGTTGVSKGAMLTHRNILANVEQTGVWISASFQEGREIAIAPLPLYHI
FCLTSTLSFMKWGSLIVLITNPRDLPALIKELGRWKFSVMTGVNTLFNGL
LNAPGFDQLDFSTLKVVVGGGAAVQKTVAERWQQVTGRYITEAYGLTETS
PGVCANPLATPWNGKIGLPIPSTEVSIRDEHFNELPVWHGEGDLEQHTGE
ICIRGPQVMKGYWNNPAETAKVMQDGWLKTGDVGHLDGEGYFAITDRKKD
MILVSGFNVYPNEIESVIAMHPGVLECGAVGIPDEKTGEAVKVVVVRKDP
SLTKDDILAHCKTQLTGYKMPRHIAFCDELPKTPIGKILRRDLRDMPKS
>Rfer_1512 ABC transporter related
MSRRCLAQQWFMRFLAKLRLMPKPTPLKASPRSLSGLLPFLMPYRGRIGL
ALAFLVLAATATLAFPLALRSLIDAGLVQSDKGAQMMALRQHFVALFAVA
VALGLFSAARFYMVSWLGERVTADLRNAVYTHVLQQSPEFFETTQTGEVL
SRLSADTTLVQTVVGSSLSMGLRNTVMGIGALGMLIWTNPYVMLQVLTLL
VLVIVPSLWFGRRVRKLSRASQDRVADSSAIAAEVLNAIPVVQSYTAEER
ESARFNASTDSAFETAVKRTRARSVLVAFIIIATSAALLWGLYQGTQAVI
AGRISAGDLGQTVLYVIILASAFAILGEVYGDLLRAAGATERLMELLKSQ
SPITSPSNPALAPVQLDGSAIKFEDIRFNYPSRPTQAALTDFSLEVKPGQ
TVALVGPSGAGKSTVFQLLLRFYDPGAGQIVLDGVATRDLSLHDLRQRIG
IVPQDAVIFSSSALENIRYGRPEASDAEVKAAAQAAFADEFINALPQGYD
TFLGERGVRISGGQRQRIAIARAMLKNPPLLLLDEATSALDAESERMVQA
ALESAMRGRTTLVIAHRLATVIKADHIVVLDHGRLVEQGTHAELVAYGGV
YAGLAALQFNA
>Rfer_0998 short-chain dehydrogenase/reductase SDR
MQLNSKIAAVVTGGASGLGAATARRLASHGVKVALFDLNVAQGEALAQEI
GGVFCQVDVTSEEQVDAAFARARSVNGQERILVNCAGTGNAVKTAGRDKT
TGDIKHYPLDNFDRIIQINLVGTFRCIAKSAAGMLTLEPLADGERGAIVN
TASVAAQDGQMGQASYAASKAGIVGMTLPIARDLMGEGIRVNTILPGIFN
TPLLQAAPDNVKAALAASVPFPKRLGDPAEYAHLAETMIVNGYFNGESVR
LDGAIRMAPR
>Rfer_2069 3-hydroxybutyrate dehydrogenase
MLKGKTALVTGSTSGIGLGLAKALAAQGANIVLNGFGDVEGPKAEVAALG
VKVAYHGADMSKPAEIEDMLKFAAAQFGRVDILVNNAGIQHVARVENFSV
ERWDAIIAINLSSAFHATRLALPAMQKANWGRIINVASVHGLVASAEKSA
YVTAKHGVVGLTKVTALENATTGVTCNAICPGWVLTPLVQKQVDAKAAAG
GISNAEAIKHLLSEKEPSLQFTTPEELGALAVFFCSPAGNNVRGVAWNMD
GGWAAQ
>Rfer_3761 secretion protein HlyD
MSSRTLPDFLWSVRRAMPWLGAFVMSVAAAQGGVQVPVVPAQVKSVGTGF
ELDGVVQPVKQSTISAQASGRIATLLVKAGDKVRAGQVLATIDDREAQTG
VQSSQAQVAQAQAGLHNAQANFDRTRDLRAKGFVSAAALDTAEAQLKGAL
AGRDQAGAGARQSALAQGFTRVTAPFEGWVLQTHAEAGDLAVPGKPLLTL
YAPLPMRVVVQVPVSRSGAARAAGAVELLLQDGVGAGQWQRPVSISTVPT
ADPVSQTIEWRLELSAEAAKTLLPGQQVRVRFAGGQADRMLVPSTAVLRR
GELTAVYVVSGTGFVLKAVRLGADHGAEGVEVVAGLTAGDRVALEPVKAG
LAGAQAVAPSAVTK
>Rfer_3284 AMP-dependent synthetase and ligase
MNLAQLLVRAARVFPDRPAVLLGDLPVLNYRELADRTARLAAYLSRTLGL
APGERVAVFMTNHPAYLEVLYASWWAGLVVVPINAKLHPKEVEFILNDAQ
VAVLLASDDLAAGVQPLLGHVSSLRQVLTPGQPGYELALAGDPLAPVHRA
PDDLAWLFYTSGTTGRPKGVMQTHRNLYAMTACYFMDVDEVQADDAIVYA
APMSHGAGMYNFAFVAKAARHVVPASGGFDPAELVALSRSVGRLCMFAAP
TMVKRLVEHVAATGAACDGFKTIVYGGGPMYVEDIAGALATMGPRFVQIY
GQGESPMSITALSREQLNASANPRWHDRIASVGVAQSLVEVRVVNAEGAS
VPDGETGEVVVRGEPVMAGYWRNPDASAKALRAGWLWTGDMGAMDGEGFL
TLKDRSKDVIISGGSNIYPREVEEVLLQHPGVREVAVIGQSDPEWGEVVV
AFVVGVDVSPQALDALCLDHMARFKRPKHYHFVDSLPKNNYGKVPKTMLR
ELLKKENEKC
>Rfer_0433 short-chain dehydrogenase/reductase SDR
MTVFAQYPSLTDRTVLITGGATSIGACLVEQFTAQGAKVGFIDIDTAAGS
TLASALAGARHAPLFVHADLTDIAALESAIEKVRQHFGPINALLNNAAND
RRHTIEETTSETWDAGIAVNLKHQFFAARNVAPDMRKAGGGSIVNFGSLS
WMLKQGGMPVYTTSKSAVQGLTRSLARDFGPFNIRVNTLVPGWVMTEKQL
RLWVDDAARADIARGQCINQPVLAEHIARMALFLAADDSAMCTAQNFVVD
GGWV
>Rfer_3185 secretion protein HlyD
MTIPTTPNAPTPAAAPGEALSSANLQTLLKEGPKRVWWRRTTLWIIVGLL
VLSGVGYYFWQASATRNATPVFVTEPANKGNLTLTVAANGTIQPTRSVSI
GSELSGTVLRVLVDVNDQVKKGQVLVELDTAKLSDQVARSRAALSAARAQ
VAQAVATVSEAQGNLGRLEEVARLSGGKVPSKAELDSGRATLERAQAEEL
SARANVVQAQATVSTDETNLSKASIRSPTDGVVLTRTVDPGNAVAASLQA
VTLFTVAEDLSKLRLQVNVDEADVGSVKVGQKARFTVSAYPARNYPATIT
RVAFGSTITENVVTYITYMEVDNKDLSLRPGMTASATITSTERNDVLLVP
NTALRFSPSVSGGAAGAAKSGGIMSSLLPRMPRTGARKSAGGSGPSKQVW
VLRDGAAVAVDVKTGISDGRMTEITGGELQPGMLVITDQRSGGTAP
>Rfer_4001 beta-ketoacyl synthase
MNKVVVTGSGVICPLGADKASAFAAALEARSGIGGCPADIAARLPHVVVA
QASVDPQTLLERADQGLDRATQFALVATAQAIAEAGFTCPPTDSRRVGVF
VGIGFGGSQTSNSLYERFYTTLLDPNLKHKDPTVMHPLTVPRVMANAAAA
AITMRYKLHGPSNTYSVACASSAIAIGEAYRAIRHGYLDAAVVVGTEAML
NAGAMLGWNALRVMAKADASDPSRSCRPFSSGRSGFVIGEGAAALVLESA
TRSTQRGARVLAELAGYGCSSDAQHLTAPSVDGQAHAMQQALQEAGLAPE
QIQYINAHGTATDAGDVTETQSIHQAFGPAARLVAVSSTKSMHGHLIGAT
GALELALSIEALNSGSLPPTAHLDKPDLRCDLDYIPLRARHGCQVDAVMS
NSFAFGGSNVSLIARRFAAP
>Rfer_3507 short-chain dehydrogenase/reductase SDR
MNYQSVFAPGLFAGQVMLVTGGGSGIGRCVAHELAALGAHVVLIGRKADK
LQSVVDEIYQDGGVASFHVCDIRQEPTVKQTVAAVVAAHGRIDGLVNNAG
GQYMMPLEAISAKGWEAVLNTNLTGGFLMARECFLQSMAKHGGSIVNIVA
DMWGSMPGMGHSGAARAGMVSFTETAALEWAGRGVRVNAVAPGYIASSGM
DHYPPEMGPMLREMTQTIPLGRFGTEAEASAGIVFLLSPAAAFISGSTLR
IDGARPQVRMGWPMRVASKEALQRDAIKPFNGFHRAQSPKVLSI
>Rfer_2493 short-chain dehydrogenase/reductase SDR
MRLNDNKQETHMTRTIHQLFDIKGKTALVTGGSRGLGLQMAHALGEAGAR
IMLSARKADELEQATAELQAAGIDARWIAADCAKEADIHRLADETLQRMG
DVDILVNNAGAAWGAPAEDHPIEAWDKVMNLNVRGYFILSQVIAKKSMIA
RRSGRIINVASIAGLGGNPPEMTTIAYNTSKGAVINFTRALAAEWGKYNI
NVNAICPGFFPSKMTAGTLAALGEEKLAAGAPLRRLGDDEDLKGLCVLFA
SDAGKHITGQWLAVDGGVSVLIGG
>Rfer_0442 short-chain dehydrogenase/reductase SDR
MTHAALTSGSVAVITGGAAGIGLAAAKRMAQLGLRVCIADLGTDRLIRAA
QEVVLLAAGGTDDVMTLETDVSRVEDLRRLEEVVRDRFGGTDILMNNAGI
QPGSAMFGPAGNWERVLDVNLWGVIHSTQIFVPAMIKRGRPGLVINTGSK
QGITTPPGDPAYNVSKAGLKAFTEALQHELRNTPNCRINAHLLIPGFVFT
DLTAQGRTEKPAGAWTPEQTVDFMMERLEAGDFYILCPDNDVPRSLDERR
ILWAAGDVVENRPPLSRWHPDYAKAFEAFSQKKS
>Rfer_2088 hypothetical protein
MITKHLDLGCGPCPRNPYSRDEVHAVDLVAPEGMEPRLFRQANLSLEPIP
HPDSTFDSISAFDFIEHIPRVLTAADGRGTRFPFIELMNEIHRTLKPGGL
LYALTPAYPHAATFQDPTHVNVITNITSMYFCGDQPLARMYGYHGSFEAL
RNDWAMYPEDFVPGTILGWRRRLRRWRLKRSGRLSHLVWEFACVKPVP
>Rfer_1246 short-chain dehydrogenase/reductase SDR
MWSSWLKRFEVRFINKKVFVTGASRGIGQGIAEAFRAEGAWVIGTRTGEQ
CAPDEVCNEWFSADFTQLEQIAACAEFVRKTSPDVLVNNAGINKNAPFVD
IDPDMFRTIQQVNVVAPFMLCQAAIPSMKQKGWGRIVNISSIWGKISMAH
RASYSASKFALDGMTVALAAEHSIDGIIANSIAPGFIDTDLTHHMLGDAG
IKALVSKVPANRLGQVSEIARLVLWLASEENTFIAGQNVAIDGGFTRV
>Rfer_3978 acyl carrier protein
MNEHDIAFRSELKAYILSAVDKTEPADGLRDDEPWFGSESRLDLDSLDAL
QISMAIQKKYRVRMPDSKDTRRAMVSLLALAEYLRTHQPT
>Rfer_3515 UbiE/COQ5 methyltransferase
MAEQQPTFDAAKYKNAQREQWNKDGAAWRRWNPTLDRWYGEVTRKMLDLA
RIQPGQRILDIAAGAGEPAVSASERVGPSGYVLATDISEGIVELALQVAR
ERGLKQIEARAMDGEKLDLPDASFDAVLCRLGLMYMPHPVTALREWRRAL
RPGGRVAVVVFSTPDRNSWGALPASIIRRRAQLPPPVPGQPGPFSLGAPR
VLENIFSQAEFANPEVHTVQVPLRMASSAEYVRVAREAFGGFNAMMAHLP
PQERESVWNEVEGAMHSFDSPAGFEVPGECLVGAATK
>Rfer_3285 short-chain dehydrogenase/reductase SDR
MLKGHTALVTGSTQGIGLAIAHALARAGANVVVHGIESMAQGHAIATQVA
AMGGVRAAYVRANLALADEAAGLVAAATQALSAPDILVNNAGIQYTCPIE
SFPAERWDAILAVNLSAAFHTMKAAVPGMRERGWGRIVNIASVHGLVASV
NKGAYLAAKHGLVGLSKGVALETAAQGITVNCICPGWTDTAIIQPQIEAR
AAQFGGDRHAGIRDLLSEKQPNLTLLPPERIGDVTVFLCGQAGAGITGVA
LPVDGGWTAQ
>Rfer_1925 AMP-dependent synthetase and ligase
MRAAFPPNLDALAIETDTGLLYSWRDLERATAMLANLLGSLDLPAGARIA
VQVEKSVEALLLYLATLRAGFVFLPLNTAYQSAEMAYFIGNAEPAVVVCT
DRNFGWISQLAFKAGTQHVFTLNENRTGSLLARAAAQPDQHEVAFKHADE
LAAIIYTSGTTGRSKGAMLTHGNLLSNAQVLKSYWGWRSLDEGGDVLLHA
LPIFHVHGLFVAIHGALLSGSQMIWLNQFDPKTVIKKLPEATVFMGVPTL
YVRLLAEPGLTREVARHMRLFISGSAPLLIETFKAWQERTGHTILERYGM
SETAMITSNPYRESEGARRGGTVGLPLPGVSLRVQDDAGENVAAGEIGNI
EVMGPNVFKGYWHMPEKTAEEFTLDGFFKTGDVGKIDAQGYVTIVGRSKD
LVISGGYNVYPAEVEGYINELPGVAESAVVGVPHADFGEVGVAVVVAKPG
VALESARILVSLKATLANFKVPKQCFVVDALPRNSMGKVQKNVLREQYSA
>Rfer_3770 ABC transporter related
MWNLEGAGSLSPTVTASDELLDCLLIVARAHGEVPTRDALMAGLPAEHSR
LTPGLFSRAARRAHLSSQLVSCPLTGLKAVLLPAIALLQGERACVVLGFN
EDRSRANVVYPELGDAPVQVPLSTLEADYLGTSIYARPTQRFDARTPEVR
AGRHGHWFWGVIGESRPLYRDVLLAALLANLFALGMPLFTMNVYDRVVPN
HAFETLWVLALGLLLMLISDLVLRTMRGRFVDLASSRADVKLSAFIMERV
LGMRMEQRPASAGSFASNLRAFESVRDFIGSATVVAFIDLPFALIFMVVI
GLISWLMLIPLCIGAAIMVLYALAVQGRMHELAETTYRAGAQRNATLIEG
LVGFETLKALAAEAPIQRKWEKSAALLARVGAQLRLLSSTASNTSAFVQQ
FINLAIVIIGVYLISERDLTMGGLIACTMLASRAMAPVGQVAGLLVQYHT
AATALTSLNEMMAREVERPEGTSFISRGRLKGALEFRDVSFTYPGQSTPS
LRNLTFSIKPGEKVAILGRIGSGKTTLEKLILGLYLPSEGAVLVDGIDLR
QLDPAELRRQIGYVQQDVMLFYGSLRENITLGAPLADDAAIIKAAEIGGI
IGLVNQHPKGFDMLVGERGESLSGGQRQGVAIARAVINDPPIMLLDEPTS
SMDYSSEDDIKRRLTEYAQGKTVVLISHRTSLLDLADRIIVMDGGRIMAD
GPKEQVVTALRQGRIGKAT
>Rfer_1679 hypothetical protein
MSTQRPPTIDPQAAQRWQRMAPAPSPWLHEEVARRMEERLAWIKCQPDSW
AHWEPVRGGLQAHALLAQRYPHAGCFVAEARKDKAQYAAKQIAKPWWRPT
RWTAGATQFEMPGDGAVQMLWANMTLHMAADPQDVMAQWHRALAVDGFLM
FSCLGPDTLQELRGLYQSLGWPAPSHEFTDMHDWGDMLGAAGFAEPVMDM
ERITLTFETPQRLLQELRGLGRNLQPQRFPGLRGRQWREQLHRELERLPL
QLTFEVIYGHAFKPAPRLTMRAETVLSLDQMRETLSQRKKFSNKS
>Rfer_3627 thioesterase superfamily
MKAFQDYYPENLAHCYGCGSKNDHGHRIKTFWDGEETVTHFTPEPFHTAI
PGFTYGGLLASLIDCHSTGTAAAAMYRQEGREMDTLPAFRFVTGSLHVDY
LKPTPIAGVLEIRGRVKEIKGRKVVIETTVYAAGVATARGEVVAIQMPEN
FGAASV
>Rfer_3313 Twin-arginine translocation pathway signal
MKRLTAQDFDQELLILFDAYVHGTIDRRGFLEGAQKFAVAGMTAGMLLAA
LSPNFAQAQQVSPDDRRLKTERVQYPSPAGYGTIQGYLARPANASGALPG
ILVVHENRGLNPHIEDIARRLALDGFMAFAPDALTPLGGYPGDEDKAREL
FAKLDQDKTREDFLAGARYLKGRGDCNGKLGTVGFCWGGGVAHVLSTHLP
ELDAAVTFYGNHPPAEDAAKVKAPLLLHFAGTDERINASWPAYEAALKAA
GVHYTAYQYPGTQHGFNNDTTPRFDAASATVAWQRTMAFFEKNLRG
>Rfer_3984 beta-ketoacyl synthase
MQPLLINTFTTTTALGRGLTDTLSALRAQRSGLQARSWETVDLPTCLGEV
DGLDAINLRADMQAFDCRNNRLAQLALEQDGFMQSVQTAAEHYGRQRIGV
FLGSSTSGILSSEQAYRQRDPVSGALPASHSYRHTHNMFSVADFVRHYAD
LQGPACVVSTACSSSAKVFGIAQRMIGCGLIDAAVVGGVDSLCLTTVYGF
NSLQLISNRPCMPFDAQRDGISIGEGAAFILLERADQAQTDDLLLSGVGE
SSDAHHMSSPHPEGRGARLAMQAALDMAGLQPQTIGYINLHGTATPSNDA
VEDLGVTAVFGTNTPCSSTKGHTGHTLGAAGSVEAVICALALRHDFLPGG
VGTRTPDPRLHCNYLLTNQEQAITHALSNSFGFGGSNCSLLFSRKRA
>Rfer_2065 Hydrophobe/amphiphile efflux-1 HAE1
MAKFFIERPIFAWVIAIFIMVLGGVSIKQLPIAQYPTVAPPTIQISAAYP
GATAQTLEDSVLAVIEREMNGATGLAYMESTSQANGTGSISLSFEPGTDP
ALAQVDVQNRLARATPRLPTIVNQQGVRVEKSRANFLLFTMLSSKNPDVT
LDMLNDYAARNVLPELQRITGVGTVTQFGSERAMRIWIDPSKLRGFNLSL
DQVNAAIRAQNAQISAGNLGDLPSAPGQTMNATIVVPGQLSSVESFGKIV
LRANTDGSTVRLKDVARIELGAQSYSTSARLNGQPAVGLGVQLTPTANAL
ATAKAVKVKLAELQPLFPQGVSYTIPYDTSIFISASIGKVVETLLEAMLL
VFLVMFLFLQNIRYTIIPTIVVPVALLGTFGALLAMGFSINVLTMFGMVL
VVGIVVDDAIVVVENVERIMSEEGLPPLQAARKAMGQISGAIIGITVVLI
SVFVPLAFFAGSTGNIYRQFSATMATSIAFSAFLALSLTPALCATLLKPV
EAGHHLEKGGFFGWFNRGFKSTAKNYEGGLAKLLKRAGRMMIVYVMLIGV
VGLIYMRLPTSFLPNEDQGYIVTNVQLPAGATLERTRSVLTQVEGYMLKQ
PEIANIVTVAGFSFSGQGQNAGLAFVILKDWSERAGPEHSAQAVAGRAFG
ALMAVRDAFIFALSPPPIPELGNATGFTFRLQDRGSKGHVALLNARNMLL
GMASQSKVLAGVRPDGLEDAPQMQIDIDRDKASALGVGFDSINSALSTAL
GSAYVNDFPNEGRLQRVVVQVDASARMQPEKVLDLPVLNSSNQIVPLSAF
ASTRWVNGPMQTVRYNGYPAMKIAGDAGPGFSTGDAMAEMEKLAARLPEG
FGFEWTGQSREEKLAGAQAMVLYGFALLAVLLSLAALYESWSIPLSVLLV
VPLGVLGVVLATLLRGLSNDVYFQIGLITIIGLSSKNAILIIEFAKDLQA
EGKSVMESALGAAHLRFRPIIMTSTAFTLGVLPLFLSTGASSASQRAIGT
GVIGGMLTGTVLAVIFVPAFFLLVRTFFKGSQRQHERDLKAAHLHHQEAG
NE
>Rfer_1006 AMP-dependent synthetase and ligase
MLGLMQDRPLLISSLIEHAATFHPGTEIVSRLPEGPLHRTNWGELRDRSK
QVANALTSLGIKPGERVGTLAWNSHRHLALYYGVAGSGAVLHTVNPRLFP
EQIDYIINHAEDQILFFDITFATLVEQLAPVLKTVKAFIAMTDRAHMPDI
QVPNLLCYEELLDAQSTDYTWPEFDERSASSLCYTSGTTGNPKGVLYSHR
STVLHTLMELAPDTFGISSNETLLLIVPMFHANAWGMPYAAAMVGAKLVF
PGPHLDGKSIYALMRDERVTFSQGVPTVWMMLFQYMDASPDLDPRQLGVK
RIGIGGAAVSRAMLERFENDFGAEVVQGWGMTETSPIGVISKLLLKHANV
PHEDLVKVKLKQGRGVWGVDLKIVDAQGCALPWDGVAFGHLLVRGPWIAS
GYFRDEGGAVLDAEGFFPTGDVATIDSDGYLQLVDRAKDVIKSGGEWISS
IDVENAASSHPAVAEAAVIGVAHPKWQERPLLVVVKRPGVKVEAKDILDH
LSQRVAKWWLPDDVVFVDSLPHTATGKLLKTSLRQQFRDYQLPGTS
>Rfer_2066 secretion protein HlyD
MSLPRARLSIATPIPHRSPLRGHLALTSLSLAALLAGCGQSSTAPAGPAG
GMPPAEVGVVTVTPGDVGLITELPGRLEASRVAQVRARAAGILQKRLFVE
GSDVKAGQALFEIDASPYQAAFASAQGSLAKAEANLMQASAQAERYKPLV
EAKAISQQEYVNAQAASKQAEADVAIGKAAVQTARINLNYAAVTAPISGS
IGRSLVTEGALVGQGEATPLAVIQQIDPMYVNFTQSASEVLKLKAGLTNG
QYKQAGKGAASVTVILEDGSTYKHTGRLLFTDLTVDATSGQVTLRAEVPN
PEKALLPGLYVRVKLEQAQVNGAILLPQQAVTRGEQGDTVMVVGADNHLT
PRPIKLGSAQDNKWVVLEGLKAGEQVMVEGFQKLPRGKPGDPIVVKPVPW
QSQGGKPASAASVAAPAAPASAASSAAR
>Rfer_2719 Hemolysin-type calcium-binding protein
MTTTTEYALMAGHVYRTTRDEINWLPAPQGWTPYFPVPDSTTATGFPVTS
GFEAISFQKGSEIVISYAGTYDKDYSGDMVANAGLATGVGSTQLLQAVEY
YLQVKAANPGATITLTGHSLGGGLAALVGVFLGVQAQTFDQAPFAKTAWF
KAPDVMAYLSSQTDPSGNRLYSDAALKPLASYIEQKEAFGAATTFIPNAA
LISNINVQGEFLSSAPWTVYDRIGTTTQTIANSAPGVSGFDLHAQALLTA
FLQSQQTAAPGQALNELTAKLTGVLPLIFDTKLYAYSTSISNTTNVNFLD
HLVRHETGGIGGMPAGGDAMLTHFASDLNKLGTNIAGLNKQAQDAIIAQG
IEWYYWQGTDYAGKEFITQTGALLQYTSAIGDGLQDAQNKAAAYAKLWLD
PKAAAHGAYGVGTTYEQWNVNTGTSAVTATARDVDKSQIFLGQGGAETFT
GGNKNDVMLADDGDDTLDGGKGDDKLYGGSGTDTYTYTFTSSDLVGWGTD
TIGDTDGIIKIDADTLGGGKSISPRLGRAWISDDKKYQFQFKPDALTPNG
TAADSNGTLVIHRTGRLADKEAIVLNNWSQGKFGITLTTDAALPVSPAQV
RVVNGDTVPLNTSTNADTGEVTYIGSATVAAPGNSDAITAYNTSSSIKRV
EVYGLDGNDALIGDASQNLIDGGAGDDLIAGGLGLNTLIGGEGNDIILTH
FTPGIAGRRGPDDSKNQIFIGGAGADTLDGQDAIYSRLQVWQDGNGVSDM
NRRSLIVDPKLIATCERSMRARGRFRMKHLVVSGLPCTQARVEVLQ
>Rfer_3526 Male sterility-like
MQYFVTGATGFIGKRLVKKLLERKGSVVHFLIRQESEGKVAGLRKYWGAG
AARVVPVFGDLTAKKLGVSADAIKQIKGQIDHFYHLAAVYDLGADEASQI
AVNIEGTRNTVELAAAIQARHFHHVSSIAAAGLYEGVFREDMFEEAENYE
HPYFMTKHESEKIVRHECKLPWSVYRPAMVVGDSSTGEMDKIDGPYYFFK
LIQRMRQVLPPWMPSVGLEGGRINIVPVDFVVNALDVISHQKGITKKCFH
LVDPVGYRVGDVLDIFSRAAHAPKMNLFINAALLGFIPRSVTKGLMALAP
VRRVRQAIMKDLGLPEDMLTFVNYPTRFDCRDTLAALKGTGVACPNLKDY
AWRLWDYWERHLDPALHIDHTLRGTVAGKVVLITGGSSGIGLATAHKFAE
AGAITVICGRDVDKLEEACKEAKAKGYSFIAYPADIADMADCDRFIKQLI
DDHGGVDFLINNAGRSIRRAIESSYDRFHDFERTMQLNYFGCLRVTMGLL
PGMVAKHKGHVVNISSIGVLTNAPRFSAYVASKAALEAWARCASSEFADQ
GVSFTTINMPLVRTPMIAPTGLYNNVPTLAPEEAADMVAEACIFKPVRIA
TRLGITGQVLHAVLPRVAQIAMNTAFRMFPDSGAAKGAKPGDKVVKQHLS
PEAVAMQQMMRGIHF
>Rfer_2715 VCBS
MTTTLEYALMAGRAYQSTRNAINLFPTAEGWTTSRHETQPSGFEAISYQR
GSEIVISYAGTYDKDITGDQLANAGLATGVGSAQLLQAVEYYLQVKAANS
GATITLTGHSLGGGLAALVGVFLGVPAQTFDQAPFAKTAWFKAPDVMAYL
SSQTDPSGNRLYSDAALKPLASYIEQKEAFGAATTFIPNAALISNINVQG
EFLSSAPWTIYDRIGTTTQIIANSAPGVSGFDLHTQALLAAYLQSDLTAP
SGQALNEVTATVPQLLGMIFDNKLYSFRADDASNRNFVDHLVRHETGGIG
GIPVGGDAMLTHFASDLNKLGTNIAGLNKQAQDALIAQGIEWYYWQGTDY
AGQEFFTQSGALLQYTSAIGDGLQGAKNKAAAYAEFWLDPKAAAHGAYGV
GTTYEQWNVNTGTSAVTATARDADKSQIFVGNFAAETFTGGDKNDVMLAD
DGDDTLDGGKGDDKLYGGSGTDTYTFSSSDLVGWGTDTIGDTDGIIKIDA
DTLGGGKSISPRLGRAWISDDKKYQFQFKPDALTPNGTAADSNGTLVIHR
TGRLADKEAIVLNNWSQGKFGITLTTDAALPVSPAQIRIVNGDTVPLNTS
TNADTGEVTYIGSATVAAPGNSDAITAYNTSSSIKRVEVYGLDGNDALIG
DASQNLIDGGAGDDLIAGGLGLNTLIGGEGNDIILTHFTPGIAGRRGPDD
SWAAPTEARALLAQGATWGVYKDAQGVMHVSTNNTLYDPQAQAGTPEASK
ATEVDYFLYPVLTNPLNAIEQSWVTETDAGAGNDIVLGGIATDIIDLGDG
DDVAFGNLGHDDIRGGAGADRLYGDVGKAGISASLAYYPIGDDLLDGGAG
QDILVGGLGADILYGGSEDDLLFGDYVTLDVAQTTADDWLLGIEPPADAS
ILYYDYADYLDGGAGADTLIAGGGNDTLLGGIGADILQGEQGDDFLDGGG
DKDMLYGGAGNDQMEGGAGDDVLMAGSGDDSLFGGAGNDTLYADSGKDLM
DGGEDDDTYVIASGQGVKVVRDSGGVDTLRLASWFGLDGFRLGLGSLKIT
SPEGDEIHIEGFDPEDPYGSGAIEYFELASGQIISYSELLAALPMFIDGT
EGDDVLLGTALDDTLYGSAGNDTVDGRAGNDWIDGGTGADQMTGGAGDDN
YVIDQAGDQVVELEGGGRDTVTVSFDYTLNVAHVESLVLAGAAITGIGNN
LDNGLYGNELANTLMGLAGDDTLAGGDGDDLLNGGEGADTMSGGLGNDTF
RVDNAGDRVEDVAATRQAGVLVSGGQDHVYSTVSYTLGSGIESLTLDGEG
SIDGHGNVESNHIVGNAADNVLTAYSANGLLDYFNHAPFKMDGDAEYAPY
LSMDGERMLDHMYYSSFEQDSGSAAPAYGVLQIDISSPQGDELLGGEGDD
QLWGDINGDSLVGGGGNDLLVGYWGGDTLQGGTGDDTYVVDSSTQWWDQW
AWNGRFWIHFEYQNGDTDEILEETDEGIDTVLSLNDFVLGANVENLTLVD
GFANGPRDGDLTQDLLSGDSYSYGYGRHGVGNSLSNVIIGNSQSNHLEGL
GGADTLIGKAGHDRLDGGTGDDLMQGGDGYDTYVVDSVGDTVVEEIADEW
VGGRDAVETTLDGYRLGAHVEDLYLKGDANIGGIGNELANDLYGNSGANV
LEGLEGDDELYGNGGDDRLIAGSGNDQLNGGIGSDFMSGGQGDDRYIVDD
AGDVVSELDGEGHDRVYSEVSYTLGAGVEDLRLYDSSVTVGLYGRGNQLA
NTIYGGYSANRLEGLEGDDTLDGGGGTDTLVGGVGNDVYYTDRASDVVIE
LANEGTDEVRSSSSYSLSDHVENLTLLGDFVTDSSVAYGSHRIEGNSLAN
RVIGNDGHDTALGHGGNDVMDGRAGNDVMDGGDDDDVMYGGADAIYAYFE
VAEQYYGGVSRHVELLAQNSDELHGGSGNDQMDGGSGNDQLFGDQGDDVL
HGGADGLVARSEAYIQYDVEVTPASEQFHTNDDTLDGGGGNDVLDGGSGN
DLLLGGDGDDYLYGGDDGPLNTSNNDVLDGGAGIDTMRGGTGDDIFFVDG
IVAINPEGNLNQVNLCDEEHRFGVDRTASYSWTSDTVIEEAGQGMDAVYS
TASVVAENVETVTLLSTGSILDIDATTGAGDQVLTGNAGRNRLDGGTGAD
RMLGGSGDDTYVVDDVLDQVIENPDEGFDTVRTALNDFTLSAELEGLVLE
GAALNGFGNSANNVLIGNAQNNILEGFAGNDTLAGWRGNDELRGGAGNDT
YAFSRGDGVDAVIDSEGSGRLHFSGDVSMSDLVFSSVGDDLVIDVLDAGV
SNGDRVILKNWMISPERVDSLSFCGNVSLPLDESVLNHAPEALADHDEVV
EDITVAVSGSVLGNDSDPDQGQILTVKNPGTFAGLYGALTLAKDGSYQYV
LDSARTDIQALGVGETRAESFSYIVTDDAATKPLTANSTLTITILGANDA
PIVQADTAAVVEDGPVEAMGNALVNDSDVDVGDQLRVTDTGTRIGQYGQL
VLTSDGEYRYTLNNADMRVQSLAAGQKVTEAFSYTAQDDSAEPGSASGQI
VVTVTGVNDAPVLNLPLADRVVEAGQAISFVLPLSTFSDIDQGDLLTYAA
QVVDASGNVQALPSWLSFDAATRTFRGTAAGATDLDIRVIATDLSGATAF
DEFNLQATVSGHCGKGNEGVGNGEDPPPPGHDTNWNDGPGTSPGHPGRRG
GGKKPSTSTDTGALASADYQAIGGYEDGWDTVISTINYVLPAHMQALLLD
GSGAINATGNALDNWLVGNSGSNVLNAGSGSGTDILQGGQGSDQLTDGAG
SNLLDGGAGVDVLTDGEGASWLFGGKGNDTINLGQDSDLLGFNRGDGADV
VNPGQEALANDVVSLGKGIRYADLRLAKKGNDLVLDVGAGDSITFSKWYV
GSVNKGVGKLQIVTVEGDYDATSTDKTRDQQVEVFDFAKLVQKFDAARAA
SAINARGWAMMNSLLDAHLQGSNTAALGGDLSYQYATTGSLAGIGLGAAQ
SSLAAGTDWQNLKNRSQLEQGSVQLM
>Rfer_1940 Secretion protein HlyD
MKRKVWIGIVGLLVLALLGWAFMPTPAEVEIAAVTQGRFERSVQEDGKTR
LRDRYVVSAPLAGRVARILLKQGDTVMRDAPVATFWPVAPALLDERTRAE
QSARIGAMQASVARAQANVGRAGAALDQAQAELKRSEALAQQGFVSPNQN
ETGRLAVRLREKELESARQEEAAARHELEQSRVALRQFSQITPGGRQRAY
DVKAPVSGKVLKVQQQSEGIVMAGTPIMELGDPTQLEVVVDILTEDAAQI
KPGTAVQLSNWGGPDVLTGQVRLIEPAAFTKVSALGVEEQRVNAIIDITS
PPEKWQALGDGFKVDVRVLVQVVENAVMIPVSALFPVGARSGLFVLDKGH
ARLKEIEVAARNGALAWVKTGLTKDTQVIVYPDTKLKDGDRVKTR
>Rfer_0379 acriflavin resistance protein
MNFSELFIRRPVMTVLLNLAIVLAGVIGFRSIPVAALPSYDTPVINVFAA
LPGANPETMASSVALPLEKQFQTVPGLKTISSTSTLGRTSLTLEFDEGRN
VDAAAVDVQAALLRAQRSLPQDMTATPSYRKVNPADAPVLLISMTSPSLA
PSDLQDFAEHLISPTLSTIDGVAQVNVFGSKRYAVRVSVHPEALAVRNIG
LDELSTALRAANVNTPVGTLDGPRQTLMLQANRQLQNAADFADLIVSNRG
GNPVRLKEVAQVEDSLETLKSWATFNGENSITLAVQRQPGANTVRVVDAI
RQALPNLQSQMPQSVKLVPFLDRSVSVREALHDVSLTLLGTIALVVLVIF
LFLRRFVATMIPMLSLPVSLVGAVALLWGFSYSLDNISLLGLTLAVGLVV
DDAIVVLENIMRHVENGEAPFPAALKGAREVGFTIISISTSLIAVFIPIF
FMPGVIGLLFHEFAVVVGLAIIVSAFVSLTLVPMLASRFLTGEAHKKPPG
AVVRSFARGFDRLLAGYTRLLDIALGHRTLVLLLALATLVGTVWLANIIP
KGFFPEEDIGQIQVSTEASEDTSFPEMVRLQEQAAAIIRLDPNVAAVSSF
NGGSGAQNTGRMFIALKPSNQRQTMKKVVEGLRRKLRELAGISVFMRPVQ
NLQLGGRPSKAQYQYVLQSVRADELNSWASKLQDSLSADPLFRDVTSDAQ
LRGLQAQLKIDRDSANKLGVSIDGIRTALYSAFGERQVSTIYLPTDSYQV
IMEVQADAKEDERALGGIYVRSNTGALVPISNFTTVERTLGPTAINHVGQ
LQAVTVSFNLAPGAALGAATAKIDAARAAIQMPSSIITSYGGDAAVFKSS
QGSQLVLIIAALLVIYVLLGVLYESYIHPITIIAGLPSAAVGALVTLMLF
GQDLTLIATIGIVMLVGIVKKNAIMMIDFALDAQRHQGMAAAQAIREACI
LRFRPIMMTTMAALMGALPIALGLGAGAELRQPLGLAVVGGLVFSQAITL
FITPVIYLALDRFSGTGPVLTAES
>Rfer_3201 ABC transporter related
MANKVIEAHQITKHYGLIQAVDGVDLAVEAGEVFGLIGHNGAGKSTLFKM
MLGLIPATSGEIRIDGTPVRGEEFRRVRRHLGYLPENVVFYDNLSGLETL
AFFARLKGVDLGECAPLLERVGLTAAANRRVKGYSKGMRQRLGFAQALLG
KPKLLFLDEPTTGLDPEGIREFYRILKEMRSEGATIILTSHILSEIQERV
DRLAIMKTGKIQAIGTVQSLREKMALPLRFELRLAPGAEIELRQIVDTLE
GAELSEDGERVTVHCQREAKMPVLQALAALNGRITDLHIREPSLEDVFLG
YSG
>Rfer_3996 putative methyltransferase
MSVAVMMHLLRERLYWRKRTRVPEPNLVMQSETQTESFARAGQEGGALAF
LYLYHAVQITSVLQPGDRVLDLACGPANQLLQIARLNPQVHFVGLDASST
MLQCAQNTLAQAHIHNVELVQGDMTRLVRQEDASMDGVICTMSLHHLPDH
AALCTTLREVRRVLKPQGRFYLTDFGRLKLLRTQRFFADDLRQSTQFTED
YFNSLRAAFSVEELSAAVAPLGSDVQRHVTVLAPFLVVFKSAFQRPMDPP
TLQRAKEAFAKLSATHQDNFRSMASWFRVSGYALPCELD
>Rfer_3586 short-chain dehydrogenase/reductase SDR
MRVNNKVIIVTGAGGGIGEGIAKRLAAEGAKVVVNDINRTAGEKVVGDIT
QAGGAAAFFAADVTQSLDMKALVEFAMQCYGRLDVMVNNAGWTHRNRPAL
EVSEDEFDKCFAVNMKSIYLSTIHAVPVFRANGGGSFINIASTAGVRPRP
GLTWYNGSKGAVITTSKSLAAELGPDNIRVNCINPVFNPDTGLATEFAGG
PLDDARRNKFLATIPLGRFSTALDVANAALYLSSDEATFISGVCIEVDGA
RCV
>Rfer_3810 Carboxymethylenebutenolidase
MAEFIELTAPDGLKFPAYQARPAGPPQGAIVVLQEIFGVNPHIRAVADDF
AAQGYLALAPATFHRVKPGVELGYSPADVAAGVALKAAVEGLAPPGVMQD
IQAAIDHALRAGTSGKVGLVGYCWGGLLAWRAACQLSGLRAVVPYYGGGM
TRAVEIERTPTCPVLAHFARQDQSIPLEGVQAFQQAHPDVEVHLYQASHG
FNCDHRSAYDATAAALARERTLAFFARHLA
>Rfer_2145 AMP-dependent synthetase and ligase
MSMSDEQTSSETKRSAPLGGRGIACTLDSESLAPRLLATVRSVADELRPQ
ARLAATLGLDDSLERDYGLDSLARVELIARLDRDLGVSLGEAAITQAETP
RDLLRFITPVSGRGAAPARAPQALTSREAVSDDYPPDSVQTLVDVFEWHL
QHHPDRVLITLYENGDQAVDLRYAELHREAVALAAGLRALGLDKGDKVAI
MLPTGREFFAAFFGTLYAGLVPVPLYPPARPSQLEDHLKRIAAIVRNAQA
RVLVTVERAKPLSQLLRAQAEALQFVRTVADLSLADAPRMQPALTASDIA
FLQYTSGSTGDPKGVILTHANLLANLRAMWRASQVGSSDTFVSWLPLYHD
MGLIGACLGALYLGFHLVLMSPLAFLARPARWLETIHRHRGTVSAAPNFA
YELCLSKLTDAELAGLDLSCWRLAFNGAEPVSPDTLERFAARFAPCSFKR
EALTPVYGLAENTVGLAFGPVGRGPLVDRVDRAALARDGVAEPARPDDAQ
ALRIVSCGSPLPGHELRVVGAGGRELPEREQGRVQFRGPSSTQGYLNNPV
ANQRLLDGDWLNTGDLGYIAAAELFLTGREKDIIIRGGFNIHPQELESAV
ANIAGVRKGGVAVFAATDRRSGTERLVVLAETRVREPAQRAQMIRAITAL
SATLLGAPADDVVLAPPRSVLKTSSGKTRRAACRELYEQGRLGTTQRPPW
QQWAALAATAAAARVRRAIRTTGRLVWGLWAWAVFCTLAALAWGAVMVLP
GVARRRRVTRALTRLLIRLIGLPLRVEGLARLPAAGPRIVVANHASYVDS
MLLGAVLPPEFSFAAKRELADAALIGPALRRLGIAFVERVDAAQGIEDTK
ALQARVRAGESMVFFPEGRLRRASGLQPFKLGAFVIAAETATPVVPVALN
GTRSLLRDGAWLPLRCAIQLTIGEAIPATGPGWSRALELRDAARKALAAH
LAEATHDV
>Rfer_2528 histone deacetylase superfamily
MTGYYTHPDCRKHEMGPGHPECPERLDAIEDRLLITGLGLALERREAPAA
SLTDIELAHSRTHVAALRGLSDVLKEDILAGGPPYAQVDPDTSINVYTWD
AALHAAGAALAATDAVIAGDFENAFCAIRPPGHHACRDQAMGFCFFNNVA
LAAKYALERHGLKRVAIVDFDVHHGNGTEDIVAGDKRILMVSFYQYPFYP
LDHVHSSAANLVNLPVPAYTKGMEIRELIESAWMPRLEAFRPEMIFISAG
FDSHREDDMGQLGLVEQDYIWITHRIKDVARRHGKGRIVSCLEGGYSLSA
LGRSVEGHIRVLADV
>Rfer_3623 secretion protein HlyD
MTPNPLLLRRLALGALALALVSAIAFVSLRTGPLAPIKITVTQVHEGTLG
PAIFGIGTVEARRSWMVGPTVAGRVLNVKVDVGDVVKAGQLLAEMDPIDL
EQRLSALDASLARAGSAQTAAQAQLKDATARRALAAANTQRNQDLARQNF
ISPGALDARLQEQASADAAVQAAQANLAGSGQDMSRLKAERAGLAQQRSN
VRLLAPADSVVTTRDAEAGSTVVAGQPVLRLIDPSSLWVKLRVDQGRSAG
LAPGLQGGIVLRSQPQTTLPGQVARIELLADSVTEERIAQVAFAEPPPGI
SVGEMAEVTLQLPATAPALLLPNASVQRQNGQTGVWRLNGDRPEFAPVEL
GARSLDGQVQVLKGLGQGERVVVYSEKALKAGARVKVVETLAQPTGKP
>Rfer_1733 acyl carrier protein
MSDIEARVKKIIAEQLGVEEAQVTSEKAFVADLGADSLDTVELVMALEDE
FGIEIPDEDAEKITTVQNAIDYANTHKKA
>Rfer_3017 short-chain dehydrogenase/reductase SDR
MAYNIDLSGRVAFITGASSGLGAQFAKTLASAGAAVVLASRRLDKLKDLR
AEIEGQGGDAHAIELDVTDIDSIKSAVAHAETEVGSIDILVNNSGVSTTQ
RLQDVSPDDYDYVFDTNVKGAFFVAQEVGKRMLARSKGAAPGTFTGGRIV
NIASMAGLRVLPQIGVYCMSKAAVVQMTRAMALEWGRFGINVNAICPGYI
DTEINHQHWHTEQGKKLVQMLPRKRVGQAKDLDAVLVMLCSDQSHFINGA
VISADDGFGV
>Rfer_4000 hypothetical protein
MCWILKHPKFQRLPKQPVENCPAMDTCKCLATIGVQCAVHLLLYPVPIQS
RTNVTPVASMLFDQIKNYLVETAGVDPQQFENPELKIADLELDSLGLIEM
LFEVEDKYGFQIPDPMVFLPMTFAGMVTAIEAMVQEHTKLQTALN
>Rfer_2492 Phenylacetic acid degradation-related protein
MNFGVAIPFVELLGFELRLYEGGLSELRYTPRPEHLNSFNVTHGGALMTL
LDVTMAVAARSVQQDMGAVTIEMKTSFMQPAVGALTAKGHLMHRTATMAF
TEGTVFDEQGRACAHATGTFKFVRRLPTGPKSAHGLNAPAGVIATD
>Rfer_1017 O-succinylbenzoate--CoA ligase
MTESLWFSAVPRIQEELHFDDRRIRCFADRPRSVYALLSDAVARFPEGEA
LVDGDLRLRWHEVQGRADELASGLASAGLVPGDRAALVLGNSASFVTIIF
ALARMGVIAVPIGTRSSASEIAYMLENSGCCAVFCDSETVARLPDAALLP
GVRLRVCLSQQPGCQALDEIALAGRGAAPVQAYAGSEEDAAYILYTSGTT
GRPKGAILTSLGVVHSTMHYEACMGLGPADRSVISVPMSHVTGLVALVLT
AVRCAMTLIVMAVFKAKQFLQLAERERMTHTLMVPAMYNLCLLQPDFSGP
ALKSWRLGAYGGAPMPPATIEALASKLGGLELMNAYGATETTSPATMTPP
GSTASHTDTVGISVPCAEIIIADFDGTPLPTGTSGEIWIRGPMVVKGYWQ
NPTATAESFTDGFWHSGDIGTMDDSGFVRILDRIKDVINRGGYKVFSSEV
EAVLASHPQVIESAVVGRPCPVLGERVHAFVVVRDGASADSLKMFCAERM
SDYKVPETFTLSSEPLPRNANGKLLKRQMRDAATEAAQAVFEKHPVRPVE
NK
>Rfer_0273 AMP-dependent synthetase and ligase
MTEPKFRPLTFGVTRVDLRDGAPGVHYLKAEQALQDYPERITDRLAHWAA
TAPDRIYIAQREKLPDGSKGEWKCITYGQAWRHARCIAQALIHRGLSTKN
PVVILSENDLEHALLALGCLVAGVPFVPTSPAYSLVSVDYDKLRHVIKTV
TPGLVFAADATRYAKAINAALPADIEVVLTQGQIDGRDHTTFADLLNTPV
TPAVDAAMQATGPDTIVKFLFTSGSTSLPKAVINTQRMWCANQQQMAQSM
PVLAQEPLVLVDWLPWNHTFGGNHNFGMVLYHGGTLYIDDGKPTPALMAE
TLRNLREIAPTVYFNVPTGFEAIAAAMQTDDVLRKNLLSRVKMFFYAGAA
MAQPIWDSLFESEEREIGERIVMSTGLGMTESGPFAIFVTNPNVKAGDLG
VPTPGMDLKLVDVDGKTEVRYRGPNITPGYWRAPNETAKHFDEEGYFCSG
DAVKWIDETDVHQGLKFDGRIAEDFKLATGTFVSVGPLRAKIIAAGAPYI
QDVVLTGINLKEVGAMVFPTQAVRALSGLPASTPMADVLTRAPVLDQFQK
VMNELNKIATGSASRIARMCLLAEPPTLDRGEVTDKGSINQRAVLTHRAE
TVAALHDDSLASILKPQSL
>Rfer_3752 AMP-dependent synthetase and ligase
MTDRIWLSSYPDGVPADIDPGKYSSIVKMMEESFKKYADRTAYSFMGKTQ
SYKQVDSLSLAFGVYLQGLGLVKGDRVAVMMPNVLQYPVAVAGIFRAGYI
LVNVNPLYTARELEHQLKDSGAKAIVILENFASVLEKCVAATPVKHVVLC
AMGDQLGLLKGALVNYVVRNKKKLVPAFSLPGAVRFNAAVAKGSAGTLKK
ITLKPDDVAVLQYTGGTTGVSKGAVLLHRNLVANLLQVEAWNEPALKKIP
ANEQLTSVCALPLYHIFAFTVGMMLSMRLGGKLILIPNPRDLVATLAELA
KHKIHVFPAVNTLFNGLANHPDFNKVDWRGLVVSAGGGTAVQSAVAKLWF
EKTGCAIAEGYGLSETSPVATSNPVTVTEYSGTIGVPISSTYLRLLDDDG
KEVPIGQSGEIAIKGPQVMAGYWQRPDETANVMTADGYFKSGDIGVMDER
GYFKIVDRKKDMILVSGFNVFPTELEDVVSQLKGVMECACVGVPDAKSGE
AVKLVIVKKDPSLTEAQVRAYCKENLTGYKQPKVIEFRAELPKTPVGKIL
RRELRDK
>Rfer_1612 UbiE/COQ5 methyltransferase
MPIQTSTHNLVQDYYGHQLQGTADLKTSACCDASTMPEWLKPLLARVHPE
VLSRYYGCGLVCPPLLEGCRVLDLGCGSGRDVYALAQLVGPEGEVVGVDM
TDEQLAVARAHQAHHTEVFGYSNTRFLHGYIERLDELGLEPASFDVIVSN
CVVNLSPDKDAVLAGVQRLLKPGGEFYFSDVYADRRVPPAVRNDPVLYGE
CLGGALYWNDFIQLAQRHGFADPRLLEDRPLEITDPKLAARTGNLRFFSA
TYRLFKLAALESACEDFGQAVIYQGSIPEHPGRFVLDKHHDMQTGKVFAV
CGNTWHMLQGTRFAPHFNFIGNFDTHYGIFDGCGGNLPFGARSESSSGVC
GLAACC
>Rfer_3653 protein of unknown function DUF752
MHTPPPEPVDWQDDTPRSRRFDDIYRARSNALAQSRSVFLAGCGLPERWR
DRDQFTVLETGFGLGLNFLTTWATWLADPQACHTLNFVSVEAYPVSFEDI
LRSTRALATAADAASDLAAQMPLLAQQLALFWPGIQPGLNQCSLAQGRVQ
LTLCVGDVLAMLQQWPGQADAVYLDGFSPAVNPDMWSSATLGAVAQHCHS
GTRLATYTVAAQVRRRFTELGFSVEKCPGVPPKRDRLQVHVAHAHSKTD
>Rfer_0380 secretion protein HlyD
MNARHFFLTLTGGLLALGLGGCTAKTDAPAPAASSSAPAKPSAAALPAVT
ITTVRAQQRDLPVLYSATGTVMALASVDIKSQVTSVVSKIHIQDGQFVKA
GELLFTLDSRTDEANLAKARAQLAKDSALRADAQRQLARAQQLYSQNFIS
QGAVDTAQAQLDSMAASVVADQAAIEAARVAVSYARISAPNAGRAGAVNV
SQGSVVQANLTSLVTITQLDPIAVGFNLPQRTLADTLSALKNGGAAVKAT
IADGGASFIGHLNFVDNAIDSSSGSVKVKAVFANPQGKLWPGAFVDISQT
VNTLKDAIVIPQATIIPNARGTMVYVVEAGKAVLRPVRVVLAQGDDAAVT
GVKAGESIVLDGKQNLRPNSPVLEQARAPAGGASGPAGGAAASQQRPTAS
>Rfer_1552 acriflavin resistance protein
MKHHQSKKSFNLSRWALEHAALTRFLMLVLLLLGVSAYFQLGQDEDPPFT
FRAMVVRSYWPGATAQQVAEQVTDKIERTLQEVPYADKIRSYSKPGESQI
IFQIKDSSKASEVANVWYSVRKKVGDMRGTLPQGVLGPFFNDDFGDVFGV
IYALQADGFSYAELKTFADDARQQLLRVPDVAKVELFGVQDEKLYIEISQ
RRLAELGLDMNAVLAQLGQQNVVESAGAVQTPLDVVQLRVAGQFNATDDL
RAMPLRGSSGAQLRLGDIASIERGYVDPPVIKVRHQGQEVIALGVAMTKG
GDIIALGKALKTTTQRLEKALPVGVKLVQIQDQPTAVATSVREFVKVLIE
AVTIVLVVSFVSLGLHKRPGQNSLLKRWTLDMRPGLVVGITIPLVLAMTF
LAMQYWGIGLHKISLGSLIIALGLLVDDAIISVEMMVTKMEQGYDKVRAA
TFAYEITAMPMLTGTLITAAGFLPIGLAQSTVGEYTFAIFAVTVIALVLS
WIVSVYFVPYLGTLLLKAPPHVVLANRAGADEPSAGPVHDPYDTPFYNAF
RRAVNACVQHRWLTLGATLLVFALGIVGMGRVQQQFFPDSSRPEIIVDIW
SPEGSSFAANEAVAKRVEARLLAEPGVASVTQWVGSGVPRFYLPLDQVFP
QTNVSQFIVVPADLKLRESLRVKLPALLATEFPEVRGRVKLLPNGPPVPY
PVQFRVVGTDPLLLRERADEVNAILRLNPNMRGVNDNWNESVKVMRLEVD
QTKARALGVSSQSIAQASRAIFSGATVGQFREGDQLIDIVLRQPLAERNA
ISDIANAYVPTASGKSIPLTQIAKPVFAWEPGVMWRENRDYAITVQGDIV
EGLQGATVTAQLLPQLKKLETQWAQSGHSGYRIEVAGAVEESSKGSASII
VGIPIMLFITFTLLMLQLHSFSRAMLVFLTGPLGIAGVAAALLLLNRPFG
FVALLGVIALMGMIQRNSVILIDQIEQDRARGVPDWEAIVESTVRRLRPI
VLTAAAAVLAMIPLSRSVFWGPMAVAIMGGLVVATVLTLLALPAMYAAWF
RVRREPNAAS
>Rfer_2488 short-chain dehydrogenase/reductase SDR
MRCFVITDFKNKTAVLTGAGSGFGLECARIGARLGMNLVLADVQQDALDR
ASAEMQALGAPVLAFQLDVAQAAQVEALGRAVQARFGAPHLVFNNAGVGA
GGLIWENSAADWEWVLGVNLMGVAHGLRVFTPLMLDAAKKDPAYRGHIVN
TASMAGLLNAPNMGIYNASKHAVVSMSETLYQDLALVTDQISASVLCPFF
VPTGISQSHRNRPVDAATVKPTRSQLIGQAMSDKAVGSGKVSAADVAQKV
FDAVATRQFYIYSHPKALASVQTRLEDIMLGRNPTDPFALKPELGLELKQ
ALRA
>Rfer_2090 Lipid A export ATP-binding/permease protein MsbA
MTKPISLSNRALYARLLSYVRPYWKAVFLAVIGMVGTAATEPVFPAIMKY
LLDNGFQAKDARMVWLIPMGIVTLFLVRSVIVYCTGYLMTWISSRLVTDL
RRTMFAKLLALPTHHYDEHSAGQMISRLVYDVSNVTDAATSALITLVRES
LTAIALIGYLLYLDWKLTLITLAIGPVIAFTVKSFSKRMRAASQKSLQAM
RFISHTIEETISAQQVVKIFGGQERQQKQFFEATEQFRRAQMREAIPASA
MTPITHIAASVAVAIIAFLALSQSTGQAGASAGSFISFITAMLMLISPVK
QLATVNPTIQRGLAASESIFELLDAAQEDDRGKRQLLRSKGEICFDNVSL
RYLGAERFALNDISFRITAGQTVALVGASGGGKSTISALIPRFYPVTSGR
VLVDGIDINDITLASLRQNIALVSQNVILFNDTVGANIAYGSLQTCSRDD
VIRAARAANAWDFIEQLPNGLDTPIGENGAKLSGGQRQRLAIARALLKDA
PILILDEATSALDTESERQVQAALAVLMKNRTTLVIAHRLSTIEHADCIL
VLDQGRIVETGTHAELLRAGSYYANLSRLQG
>Rfer_0384 phosphopantetheine-binding
MSTDRAALMATVLTLLRAIAPEVEPGTLTPERPLRQQVDLDSMDWLNFLL
SLHERFGVSIPESDYAGLVCLNDVVNYLQARLK
>Rfer_2518 conserved hypothetical protein
MDIPRIFNITESAHRIHDPITPEKLATLGTALRLESGARVLDLGSGSGEM
LCTWARDHGVIGTGIDMSQLFTEQAKLRAEELGVADQVKFIHGDAAGYVS
DEKVDVAACVGATWIAGGVAGTIALLARSLRTGGIIVVGEPYWRQLPPTE
DVAKGCLANSISDFLMLPKLLASFGQLGYDVVEMVLADQDGWDRYEAAKW
LTMRRWLEANPDDELAKDVRAKLTSEPERYAAYTREYLGWGVFALMPR
>Rfer_3994 short-chain dehydrogenase/reductase SDR
MNIESTPTRRALVTGGSGAIGAAICRRLAADGLHVIVHANSHLASAQSLC
DELQNSGGSAQAVQFDVTDSNATQTTLEALLEDGPIQVLVNNAGIHDDAV
FPGMQRQQWHRVIDVSLHGFFNVTQPLSMPMIRSRWGRIISISSIAGLTG
NRGQTNYAAAKGALHAASKSLALELATRGITVNAVAPGIISSDMTKDVFD
STAIANLVPMKRAGKPEEVAALVGFLASDSAAYITGQVISVNGGMA
>Rfer_2717 hypothetical protein
MTIQSDMALMAAGSYWDVRNGAIDPQNNQDTDNDAPTPTGWKVLTQYDMS
DFGPNASTGLSARVYQNTATGEVVISYGGTEFNTSSYGLAADFLNGNMPL
AIGDASAQALEAAKLYQRVKADATLSDNITFTGHSLGGGLASVMAVWFDR
PAYVFAAAPFQKSADSTQATTLADIFSLNRALPNVRFQLGSTADPALLNY
NPTTDFAAREANVKAYAIKGELLEANFGMFSWIEGSTNPLFTNSAITLSA
GDKHSIDLHVAALLSDTFQTEAGKLPTALERLMDRTLYGGDVLGNKQVII
TKLIRNEVGVRSDDGTQVLLAANGMLTHFASDLNKLGTNIAGLNKAAQDA
LIAQGIEWYYWQGTDYAGQEFFTQSGALLQYTSAIGDGLQGAQNKAAAYA
KLWLDPMAAAHGAYGVGTTYEQWNVNTGTSAVTATARDADKSQIFVGQGG
AETFTGGDLGDVIIAGDWADTLSGGASNDTIYASNGNATNDSDWRVAA
>Rfer_3980 hypothetical protein
MTTLSSPAEANAKLEREVAQLMVSALNLEVAPESIQADSELYGDGLGLDS
IDILEIALVVSKQYGIQMKTEGEDNFAIFKSLRSLSAYIAEKRTK
>Rfer_3106 peptidase S58, DmpA
MMHRHLLPHIGNLPQGLRNAITDVAGVTVGHHTLAAQDVQTGVTVVRPHA
GDPFRDRVPAAAAVLNGFGKSVGLLQIEELGVLETPIALTNTFSVPAVAT
AQIRQCMAANPETGRSLPTVNPLVFECNDGFLNDIQRMAITEQHYLQACA
QAGVDVEEGSVGAGRGMSSFGLKGGIGTASRRARVMANTEYTVGALVLAN
YGRLPQLVLAGHALGPQLATRLATSQKSLAAEPEKGSIILLIATDAPLDA
RQLRRLALRAGAGLARTGSVFGHGSGDIALAFSTAYTVPQQSNRPMPTTA
MLHDGLIDALFQAVSDSTEQAIIHALWGACAVTGRDGHHRIALADLLHDW
PATSHPLTPSASSS
>Rfer_3760 acriflavin resistance protein
MAMNHKPPMGVSGRMAAAFQANALTPLLALVALLLGLFAVLVTPREEEPQ
INVTMANVLIPFPGASSADVQNMVARPAEQVLSQIAGIDHTYSVARPGLA
ILTVQFKVGVPRTEALVRLYDVLNANQDWLPRDLGALAPIVKPKGIDDVP
VLGVTLWSREALPAFELERVAHAVEAEIKSVPGTREVHTIGGPGRAVQVW
LDPVRLRERGVDLLALKASLGASNFGMTSGAVLDTTGKSVQMLTVETGEF
LRSEQDVGDLVVGVSKGLPVYLREVARIETGAQLPQRYVWFTPGAGTSAT
AAAKPSTASSASASAALQAGSVYPAVTISVTKKPGENAVDVSSAVRDRID
ALRNTVIPSNIETSITRDYGETAAEKANKLMQKLAFATGSVILLVGFALG
RREAVIVGAAVILTLTATLFASWAWGFTLNRVSLFALIFSIGILVDDAIV
VVENIHRHQQLSPDATLKDIIPRAVDEVGGPTILATLTVIAALLPMAFVS
GLMGPYMSPIPINSSLGMAISLAIAFTVTPWLALKLMKPHGHAGGAHGGA
QAKGLGPKLQKLFSRVLGPFLESGRKRWLLLAGILVALLLSIGLTLVQWV
VMKMLPFDNKSEFQVVVEMPAGTPLENTAATLHELGAFLAQQPEVLNLQA
YAGTASPITFNGLVRQYYFRSDADQGDLQVNLVDKHHRSEKSHVIAQRLR
ADLEKIGIKHNARIKVVEVPPGPPVMSPLVAEVYGPDEAGRQQLAGRLAQ
AFAATPDIVGIDTSLKENAPRAYLRVRRQRAESLGIPVAVIAQTAAMALS
GVDAAYLHDGQSKYPVPVRLQLPLESQVGLDALLAMPLRAANGQMVPLSE
LVQVERGVIDKSLFTKDLKGVSYVFGDMAGKLDSPLYGLFAIRSKLATAA
LPGMGELGEYWIHQPSDPYRQYALKWDGESQITYETFRDMGAAYGVGLIL
IYLLVVAQFRSYLTPLVIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIA
LAGIIVRNSILLVDFIELQVEHGMAFKAAVVNSAAVRAQPIALTGLAAMI
GAFFILDDPIFNGLAVSLIFGILVSTLLTLVVIPVLYYALYRKRMESRAD
ANSSLVNPV
>Rfer_0405 Methionine biosynthesis MetW
MSDPHTMDALARLVPEGARVLDLGCGDGAMLAHLQQTRGCSGYGIEINDA
NVLACVKRGVNVIQLNLDEGLSMFEDASFDVVLQIDTLQHLRNAEVMLRE
TVRVGRVGIVAFPNFAHWPNRLSILSGRMPVTRRLPYQWFDTPNIRVGTH
ADLGILAGRNGLTVLDSFGLQNAKVVRRLPNLLAGTSVYKLSR
>Rfer_2600 secretion protein HlyD
MKSWLKWALAALVVVLLITSVWRALSQRKTQQETVATQAAQRTQTVVELG
SADLVPVRLLELAQGLAISGAIKAVNSAVVKARVPGELQGLTVREGERVK
AGQVIARIDAREYQSRVLQAQQLAAAAKAQIDIARRNFDNNRSLVEQGFI
SKTALDTSMASLAAAEATYQAAQASTEIAAKSIEDTVLRAPISGLVSQRL
AQNGERIAVEARIVEIVDLDHLELEASLSAAESLDVRIGQSAVLQIEGAA
KPVTAQVVRINPSAVAGSRAVLVYLAVDATPGLRQGLFAQGTLGTGHLQT
LALPLSAVRTDKPQAYVQVVSNNKVSHQNVQLGARGEVNGQTMVAIKGLS
EGATVIIGSIGTLREGSTVKIIQSGK
>Rfer_0412 Secretion protein HlyD
MKQGTGIAVAVMAAVIAAGAGYWLGHKGPASQAQGTVSATAAAVDTGAGS
TSRKLLYYRNPMGLPDTSPTPKKDPMGMDYIAVYAGGADEEPAAANQVRI
STEKVQKLGVRVEAAQLRALDKSVRASGRIEPDERRVYAISPKFEGYVER
LHVNVTGQAVGKGQPLFEVYSPELVSAQREYAIAAQGVATLKDAGGQAQS
GMQQLAGASLQRLRNWDISEAQIKALTQSGATTRTLTFRSPVSGIVMEKK
AVQGMRFMPGEALYQIADLSTVWVIADVFEQDIGLVKNGAKATVSINAYP
DKAFAGRVTYVYPTLKAETRTVAVRVELANPGLLLKPGMFAQVELPVTAK
GQVITVPVSAVIDSGTRQIVLIQQAPGRFEPREVKLGARSDTHVEVREGV
KEGEQVVVAANFLIDAESNLKAALGGLGSAAPAPATAASATAVAAPATQA
AAPAKAVGHQATGTVDGVDLKAGTVSLSHGPIASLKWPAMTMEFKTANAA
LLQALKPGAKVTVEFIERQPGEWVITSAKPADPHAGQ
>Rfer_4193 isochorismatase hydrolase
MATYVDEFTPTIKVNQADTALVVIDMQYASGSRHKGLGAFLAKQGRLADA
EYRFNRIETLIIPNTQKLLAAWRAAKAPVIYVRVGSFKPDFSDAAPHVHA
FFKMSNNYVGSPEHEIVAELTPMPGEPVVDKNTMGAFASSNLQEVFQKLG
VKTAVYVGVSTNNCVDGTACEATDRGYGSILVSDATGTCSDRMQEVTLES
FLRLSGRVDTTDALIAELQASAATAG
>Rfer_3977 beta-ketoacyl synthase
MKPVYLAGRGLACALGLTVKTSLTALSRGSDTAATCVLPGESAPSFPYRA
IADTQSDWNERACTLIRRVALEAGAERACDGALFIATSSFDIGAVEQGAA
GMDYQAFADKVASWLQWRGPVYVLSTACTSSLNAMMAAHALLRSGEVEDA
LVLGVELSNQLTLGGFAALQLLSPDRSKPFGQDRNGLVLGEAVAALRLSN
HQNSPWQMLGGANVVDGRQPTSASALAIVNMYQSALAQCGLAAQAIDLVK
VQAAGSPGNDAIEAQGLRDMFQVIPPLVSLKMAIGHTMGASGAAEVALLT
ACLEQGVWPTYADSVDETLGVNFMAHQPDAVRRVMATILGFGGGHATVVL
ERT
>Rfer_0927 N-acyl-D-amino-acid deacylase
MTRATLLENGLVIDGTGAGGWIGDVLLEGDRIAALGKALRHQLPESLRLE
EVSCVDCSGLAITPGFIDVHTHDDAIVLNHPDMLPKISQGITTVITGNCG
ISLAPFVVKKSEPPLNLLGADSFRFDSVESYERAVAAAQPAVNVAVLIGH
TTLRFACVGDLTHAASASELDAMCALLTHCMEDGAAGLSSGLFYEQAFAA
PTEEVVRLAQVVSRFGGVYSTHLRSEMQAIIEALHEAGDTAFLAGVPLII
SHHKCAGPANWGRTQETLPLIESLAIRQPVAMDVYPYVAGSTVLREDLVD
GVIDVLVSWSTPHPEMTGRTLASIATEWGVDQKVVCRRLQPGGACYFQMH
EDDVKRVIAHPLSMIGSDGLPHDQHPHPRLWGAFPRVLARYWRDQQLFSL
ETAIYKMTGMSARNFRLHQRGQLQVGWHADVVVLDPARVRDVATYEEPIA
LSEGIEKVFVNGALAYSADAGDTGEARVQARAGRLLKRLAPHTLGEPAL
>Rfer_1515 secretion protein HlyD
MTEPQNLAPPRHAAGNPARKKALSAIAGVVVIAGLGWAAYDWLVASHFES
TDNAYVQGNVVQITPQIGGTVVAILADDTDWVKAGQALVKLDPADATLAL
DQAKASLAQTVRQVRTLYANNASLQAQISLRESDVVKAQTEIARATDDLN
RRQSLAGEGAVSREELNHSQTQLANAKSAMASALAGVATARQQLASNQVM
TEGVSVEQHPSVQVAAAKVREAWLAKERAVLPSPVDGFVARRSVQLGQRV
AAGTPLMSVIAPQQLWVDANFKEVQLRHIRIGQSVELTADLYGKKVAYKG
VVSGLGMGTGAAFALLPAQNATGNWIKVVQRVPVRVALDAGELAKNPLRV
GLSMIATVDVTRQDGKMLADAPRDAALVQTAVYEALERGATQEVQKIVAA
NLGHS
>Rfer_0315 Phenylacetic acid degradation-related protein
MNVDQVVANWMAEEEETCAHLIAPDIATKEQLAGLSGMEFFERIRTGKLP
PAPIGETLDFVAIRIEPGSVVFQGRPHRRHYNPLGTVHGGWFATLLDTAV
GCAVHSTLQAGKGFTTLELKVNMVRALTDRVPLIRAIGKLVHAGRQVATA
EGRIVGPDGKLYAHATTTCLIFDHPKVKMGSGTAPSR
>Rfer_3766 Hemolysin-type calcium-binding protein
MAQFATVAAITGNGTVYAVNAQGISRTLKAGDNLENGETVRTIGDARVEF
VMEDGRLLAVAPEQTVRLDENVIESDQRPTAQDSAIVTLGATADTVIQAL
ERGTDLSTELEATAAGLGVGGGADGGSTFVQLLRVTEGVDSQSYDFSFTA
SDVPSNLPVQADIAPATLSAVNDAPSITVVAQDFTENAAKTGAVAATYAT
ADEEGDTLKVDFSAGSNAAGYYALAGGQVVLTAAGAAQVNAGGALPAIEL
TVSDATLSGTGSDTPVVTLVNDAPSITVVAQDFTENAAKTGAVAATYATA
DEEGDTLKVDFSAGSNAAGYYALAGGQVVLTAAGAAQVNAGGALPAIELT
VSDATLSGTGSDTPVVTLVNDAPSITVVAQDFTENAAKTGAVAATYATAD
EEGDTLKVDFSAGSNAAGYYALAGGQVVLTAAGAAQVNAGGALPAIELTV
SDATLSGTGSDTPVVTLVNDAPSITVVAQDFTENAAKTGAVAATYATADE
EGDTLKVDFSAGSNAAGYYALAGGQVVLTAAGAAQVNAGGALPAIELTVS
DATLSGTGSDTPVVTLVNDAPIGNADAYSTIEGSISTTLGNVLANDQDID
SPSITVAQFASSASASNTVVSANGSNMITTALGGIVVMNSDGAFRYIAPV
VQHDSENTPVSDSFVYRSTDGSAVSDWTTVTVSLGDTSPIASADNATVVF
NGLLTGNLLVNDSGVDGPLSVTSVTYNGTTNTIAAGGHTSFVTPDGRLMV
NSDGAYIFYSSIPQTKVITGSSLATWEDSTDLYGFNQSSTAWRQNVSGST
TTLNIGALTTTQQDLAAYVNSGAKPGIGVQGQGSTLGSGEQLIVKLLETT
TSATVGIAQLNAGQSPSLAKWEAYDASGNHLAGGTFDGATATSSGSEYAL
QIDSETPFTYLRIEWTGNSQGIVLSSLDTLRTTDNHTQTFSYTMSDADGD
FSSSTLAVASAASGSTPNASFDGTSGNDSHSGTTGNDTMQGNAGDDVLYG
HAGDDKLNGGDGNDMLSGGDGNDLLIGGAGHDVLIGGLGSDTFKWSFGDQ
GTAASPAADHIMDFTPGVGGDVLDLKDLLVGEHDGSGVSGNLAQFLHFAN
DASGKAVLSIDHNGTSDGAAFAADQTIKFDNMSMSELATGLGLTGGATSD
DIVAKMLVNGQLKTDV
>Rfer_0321 AMP-dependent synthetase and ligase
MPNSIADKETSMSPSKQEMTRFSDLPSSRAAAAPDAPCIADASAALSNSD
FHLCVLRAAGVFETHGIKAGDVVALMLPNQAEFVVAMFAAWHLGAAMTPI
NPALTQKEASHQIVDSRAKLLINSTGEAVVAGVTTLPATAQKDGPRHEGK
PVDDPSALALLIYTSGTTGLPKGVMLDHANIEAMTEMGREGLQITSADHC
LLILPLFHVNGIVVSVLTPLASGAHVTIRRRFDIDTFFADIERLRPTFFS
AVPTIYTMLGALPSDVRPDVSSLRYGVCGAAPASAELLTGFEARYGFPLV
EAYGLSEGTCGSTLNPVDGVRKAGTVGLPLPGQKIAIADGKGAHLPPGST
GEVLVAGPNVMRGYLNQPDATAKTIVNGWLHTGDIGRIDDDGYLSIVGRL
KEMIIRGGENIYPKEIEDVLVEHPSVLEAAVVGAPDERLGEIVVAFVSRR
PGATVTVDALNAHCASRLARHKLPAIIHIIESLPKNAVGKIAKPVLREQV
RGQ
>Rfer_1638 short-chain dehydrogenase/reductase SDR
MQSTWRLFMDMGLAGKTALVLGAGGGLGCAIASSLAREGANIAVADINEE
ALMRTVESVQKAGGTALPLLWDIGDLSVVDARMLEIESRFGSVDVLINNT
GGPPPTTAFGQDAALWTRSFQSMVLSVLAITDRVLPGMRAKKWGRIITST
SSGVVTPIPNLAISNALRLSLVGWSKTLAREVAQDGITCNIILPGRIATE
RIKFLDEAKAKREGRAVSQVCAESTSAIPMGRYGNPEEYADVVTFLASTR
SSYMTGSTLRVDGGLISSI
>Rfer_0545 AMP-dependent synthetase and ligase
MEKIWLKSYPPGVPHDVNPEQYQSLTQLLEESFRKNASSRFAVCMESWMT
YGQLDQLSSALGAWLHSLGLAPDARVAIMLPNIPQFPVTMAGVLRGGYTC
VNVNPLYTARELQHQLNDSGASVIVVLENFVATLAEVIDQTPIQHVVVAS
MGDLLGFWYGQWITFAVRHLAKMVPPYKLTLTEGRTATSFKQAIAKGAAL
PFRSAPSTLDSIAFLQYTGGTTGLSKGAVLTHRNIVAAVLQAEAWFNPAL
SRIGDVRHVNSIAALPLYHIFALTLSLLAIRWGAQLTLIPNPRDFGGFIE
TLKKRPFHLLPGVNTLFNALLAQPQFKTVDFSSLCATQAGGMAASEGTAQ
RWLETTGCPMVEGWGMSETCAIGTNNPVLAREFSGTIGLPLPGIDIAIKD
DEGQSLAQGSPGEICIRGPNVMTGYYRQPEENRRAFTTDGFLRTGDVGIM
DERGYTKIVDRKKDMILVSGFNVFPSELENVISLCDGVLECAVIGVPDEK
QGEAIKVFVVRDNPLLAEDDVARYCQQNLTGYKHPKYIEFRDELPKSNVG
KILRRELRVGK
>Rfer_1732 3-oxoacyl-(acyl-carrier-protein) reductase
MTDIKFDGQVALVTGASRGIGAAIALELAKQGLKVIGTATSDDGAAKIGQ
ALAAFPGCSGKTLNVNDAQAAEVLIGEIVKEHGGLQVLVNNAGITRDNLA
MRMKDDEWDAVLDTNLKAVFRMSRAVMRTMMKQRYGRIISITSVVGASGN
PGQANYAAAKAGVAGMTRALARELGSRSITVNCVAPGFIETDMTASLQEE
QKKALVSQIPLGQLGQPSDIAHAVVYLASPQAGYVTGQELHVNGGMYM
>Rfer_3195 short-chain dehydrogenase/reductase SDR
MDLGIAGKWALVCGASKGLGFGCAEALVREGVNVLLVARGAAVLQASASK
LIAEYAGNTGATVQFVAEDITTPQGRQAVFAARSDFDIVVTNAGGPPTGD
FRDWDRDAWIRAVDANMLTPIELIKATVDGMAARGFGRIVNITSGAVKAP
IDILGLSNGARSGLTGFVAGVARSPLAAHGVTINNLLPGAFDTDRLRGVM
QGAAQKTSQALDVVMAARRNTIPARRFGTVEEFGAICAFLCSQQAGYING
QNVLADGGAYPGTF
>Rfer_1696 Phenylacetic acid degradation-related protein
MQYSSRTGNTMTKTNHLDAWLAEEKTIRALMDAGAGPGVARADQIAGKTG
LELMQAMLRGELPYPPIAQTLDFTILEVGPGRALFQGAPGVAHLNPMGTV
HGGWFATLLDSALGCAVQTRMAPGQGYTTAELSVNYLRALTPKVSRVRAE
GKVIHCGRQLATAEARLIGADGSLYAHATTTCLVFEMPPQATN
>Rfer_2714 Type I secretion membrane fusion protein, HlyD
MKVPPMRLFATEAADFTPDLLTIQEQPPSRLPRTVGYVTVGLFGLLLVWA
TFGKLDIIAGAEGRLVPRNYSRVLQPAEAGIVREVLVRDGEEVKAGQVLM
RMDATTASADMGTLKADAALKALGLRRIDAELRGQPLLIDVRDPPELAVQ
VLAQYRARRQSHLDALAQEQATLERAQHDLMAARQQLAKLQATVPLYQQS
ANSYEKLVKEGFVSELGANDKLRERIEKEQELKTQEANMGSMTSAVEQSR
KKLAQIKSGYESQLLNERVELQSQQQRTDGELQKQVYKSGLLALKATGAG
TIKDMATYSPGAVVQPGAALLNLVPKNEPLFAEVAIHNEDVGFVAPGQSV
KVKLQAYPFQKYGMLDGTVELISADSSANDPQKATAMGQSPQSYKALVKL
ASQELRASNGEVLKLTPGMVVQAEIHQGQRTVLEYLLSPVQKVAQEAGRE
R
>Rfer_2520 isochorismatase hydrolase
MKTCLILIDAQESFRQRPYFTATDLPAYLNAQNALIDGCVARGLPIVRVF
HVDGPKTASNPFALESGFVQPLAELHPFEAAATFHKSRHSALVGTGLDVW
LTQNGIQRLIISGIRTEQCCETTTRHASDLGWTVDFCLDATLTWDMQQLD
GATLSAVDIKARTATVLKDRFATICSVAQALERATGAA
>Rfer_0271 short-chain dehydrogenase/reductase SDR
MNIQGQAALVTGGGSGLGEATARELARLGAKVAILDVNLANAEKVAAEIG
GVACQCDVTSPDSVQAAIDTATAAHGPARILMQIAGIGSAKRVVGKDGNA
APLEDFVRVVNVNLIGTYNVARLFAAACAKLEPMEDGERGAMVFTASVAA
FDGQVGQQAYSASKAGVAGMTLPMARDLAQHGIRVCTIAPGLFATPLMKT
LPEAVQVSLAASIPFPQRLGKPEEFAQLAAHIVSNCHLNGEVIRLDGALR
MAPR
>Rfer_2393 AMP-dependent synthetase and ligase
MLGLMQNHQLLISSLIEFAQRHHGEGEIVSRRVEGDIHRCTYKDIASRSR
QVANALDGLKLPFSDRVATLAWNGYRHLELYFGVSGSGRVLHTLNPRLHP
DQIVWIANHAEDSVLCFDMSFLPIVKAIHGRCTTIKHFVAMCDADKLPAD
SGIPGLLCYEAWIGAQSSSYKWPAFDENSASSMCYTSGTTGNPKAALYSH
RSTMLHAFAGALPDALSMSARDTVLPVVPMFHVNAWGLPYSAAMTGAKLV
FPGPAMDGKSIFELIENERVSFAAGVPTVWQMMLSHMQAGGLRFSTLKRT
VIGGSACPPAMITAFNDVYGVEVLHAWGMTEMSPLGTVCTLKNKHLAMTP
EEKMKVRLKQGRGIFGVDMKIVDGNGDELPWDGKAYGDLLVKGPWIISDY
FKGEGGSPLVDGWFPTGDVATIDADGYMQITDRSKDVIKSGGEWISSIDV
ENVAMAHPAVAMAACIGMKHPKWDERPIIAVMKKPGAEVSRDELLAFYEG
KCAKWQIPDDVVFVDAIPLGGTGKMQKSKLRELLKDYQLPDA
>Rfer_3898 AMP-dependent synthetase and ligase
METAQFPELDAPLHDYLRAHARTQPDKAAYLWYGHGISYAELDRASDAFA
ARLAALGVKKGDPVALFLNNCPQYVMAHYAIQKLGAIVCPCGPLNKEHEL
LYQLGDLQARVIVAADNLLPVVAQVRSQTALTHVFAVRYADLLPEQPSVT
VPAELLAMKAQPTQLPADVEDFMAATQGTARPPPVALAMDDVALMTYTSG
TTGLPKGAMLTYGNALYKSAAAANCNGVGHDDVLLAIAPLYHIAGMVMGI
NVTMFTGATTVLMYRFDPLAVLQAIERHRVTWWYSIAPMNVFAMQVPTAR
AFDLSSLRMNPVTSFGVTLTEALARQWQALAPHCESFEAAYGLSETHTVD
TYMPHDAIRWGTQGKAIPGNEIRILDAGSGRVCASGEVGEIVLRSAGVFK
GYWNKPEATAQTLRDGWVHTGDMGKLDADGYLTFIGRFKEMIKVSGYSVF
PEEVETILIKHPAIAQAAVIGVPDPDKGEMVKAFVVLKPGQSASAADIVA
WSRANMATYKAPHDVQLMAALPTTGAGKVLRRLLKDPAPSADLTPPATKQ
THD
>Rfer_3382 hypothetical protein
MNDPFGLAQNERIERSGVRKVFTPHAPVKIQELLFGRSAALKQLINQIHT
PGAFPILFGDRGVGKTSIAMIVLTLVELSMREKGNVYIDSKRCSSKETLI
SIFGKLLQKCGMDLELIESTQTSESGGGAGIHAGFIKADIGAKRTNTQKH
GAAFKNVTPSTIAELILANLDCGLLIIDETDAIEDDQVKYQLAEIVKLLS
DGHSKFKIMLVGVAELSSTLTAGHPSIGRCAVETKLDLMADAEIQQIVKT
GAVRIKPAMDFDREVVKRIAQLSGGYPYFTHLCALKCVEDALRENRKFIR
IHHLPSALKSAALEAEQTLRAQFETATSSATTGMFRVVVDAASRFGSENF
SAADLRAKIENISTHHITQGALNNLFKKLVSDNHARILHRVAKGTYRFSD
PRMPSYVKIVCESECHYPNK
>Rfer_3971 ABC transporter related
MLAIRNLNFRYPTANVAALSDVSFEAQRGEVLGLLGPNGAGKTTLIAHLC
GLLALQSGDITIDQQALAVVRASQPTRIAVAPQEYAFYPNLSVVENLACF
AGVGSLSGSEKKLRIAECLAFAQLERYASVHADRLSGGLKRRLNLAIALL
HRPELLLFDEPSVGVDPQSRAFLLQAIKQLAQDGCAVIYTSHYMEEVQAI
ADRVVILDQGRVLIKGPLAELLNANGTLLQLALEGDEPERLQSLLSPFGD
VTLLGTGVQLTLASRRSLAGVIAAVDAAGLVVRHARFGHADLEQLFMSLT
HHSLRD
>Rfer_2323 isochorismatase hydrolase
MLLDAAQSQLVLVDYQNRLMPAIFEAPLVLANALRLAQIARLLEVPIWGT
EQNPSKLGENAPELRALCAQTLSKMHFSGVEEGLGEWLRPPAKPVAGNAR
SLPKHLQKPTANASERNTVVIAGCEAHVCLLQTALHLLEDEFEVWVVTDA
CSSRTERNRDAAFDRLAGAGAELVTTEMVAFEWLRGAEHPHFKAVQNLIK
>Rfer_1421 thiopurine S-methyltransferase
MAGPTTEFWQERFEKKETGWDRGSPSPQLLAWLASGALRPCRIAVPGCGS
GWEVAELAQRGFDVVGLDYTAAATTRTRALCDARGLKAEVLQADVLSYQP
EKKFAAIYEQTCLCAIHPDHWIDYARQLHQWLEPQGSLWVLFMQMIRPAA
TEEGLIQGPPYHCDINAMRALFPQKDWVWPKPPYARVSHPNLSHELALQL
VRR
>Rfer_3568 Methyltransferase type 12
MVSTLHDERLDTVVRELLASGATSVLDLGCGPGELLLRLRGHAQFVRLLG
IDIDERVLADARFALGLDWLRPDPRLAVRLGSFTQVDRDLPGFDAAVMLE
TIEHIDPGHLPRVERAVFATMHPGLVLVTTPNQEYNLLHGMAAGRKRHPG
HRFEWTRAQFQHWAGGVAQRHSYTVSFANLGPPDPLRGSSTQMARFMVKD
AP
>Rfer_0475 putative oxidoreductase protein
MKKDPSLQLSASRFNPSEVAGKKVAIIGGTGGIGRALAREMATHGAHVTV
VGQTFRDAGVPNIEFVQADLSLMHEARRVASSLPAETLDLVIFTTGIFAA
RKRQETLEGLERDMAVSFLSRQVILQGIAHRLGVQLSKGHRKSRVFIMGY
PGTGQAGTLGDLNSESAYSAMSAHMNTVAGNEMLVLDSAQRYPNINTYGL
NPGLIKTDIRINLLGGNKFLFALLEGLIGVFTPTAETYARRIVPLMLNSQ
INGFTGTLFNNKGQAIHPSAGLTGAHIRAFLTESRTLVERAVDSQVA
>Rfer_3383 ABC transporter related
MRGGDGSGKTTLLRLLAGDLPAHAGHLQVNDVRLADLSVSYRQQVFWADP
RSSALDQITPVDYFTSLHRNHPGFDEQLLGELIKGLSLAPHLDKPLYMLS
TGSKRKVWLAAAFASGAAVTLLDEPFAALDKASIVFVMELLEDAARHPAR
AWVLAHYEAPGDVPLAQIIDLGD
>Rfer_3558 ABC transporter related
MSESILSVEHLVKRYADATVVSDMSFEIAPGECLGVIGPNGAGKTTTIRM
CLGLTVPDEGLVTAFGLHMPRDALAIKTQLGVVSQFDTLDPDFTCAENLL
VYGRYFGMKDAQIRERVPALLQFASLTHKANAKPGELSGGMKRRLSLARA
LVNNPRLLLLDEPTTGLDPQARHLMWERLQLLLAEGKSILLTTHFMDEAE
RLCNRLLVVDHGRKIAEGAPRDLIAQYLEPDVVEVFGAGALALADSPLKA
LAARTEVSGETVFFYTLDAKPLLQALAAYPQLRTLHRPANLEDLFLKLTG
RQIREEA
>Rfer_0115 DSBA oxidoreductase
MRLSTTTHQARIMSRPLKIDFVSDISCPWCAIGLSALEQALDRLQNEVAA
ELHFQPFELNPQMPAGGQDIGEHLAQKYGSTPEQQTQIRDTIRQRGAEVG
FSFNPAGRGRIYNTFDAHRLLHWAGLETPSRQPALKKALLVACHSQGQNM
ESHEVLLAAVAQAGLDVARARAILASDEFAPEVREREAFYTSQGIHSVPT
VIINDRHLISGGQPVAVFEQALRQIAANQPGD
>Rfer_0974 Phenylacetic acid degradation-related protein
MPEPINPLTQIRAINETAPFNHFFGIEVKSAGVGVVELSMPWRPEAGQYS
GFLHAGVIGALIDTACGFAAATLVGPVLASHYSVNCLRPAVGESFLARAR
VVKPGKSQVFTSCEVFALLDGSEKLVATGETLLSVVQDKT
>Rfer_0061 Phenylacetic acid degradation-related protein
MLIWKRPISVAELTAISVNTAVDHLGMEFLEVGEDFIRARVPVDHRTQQP
YGLLHGGVSVVLAETLGSCGAAYASPAGQLAVGLDINANHLKGVTSGWVT
GTARPVHIGRTTQVWQIDLQNDAGELTCVSRITMAVLPPR
>Rfer_3505 Phenylacetic acid degradation-related protein
MTKHIEVEPEVEFEDEFVTGLKKVFEEMIVFNQVLGLKITSLKSTQVRGR
IDMKPDLVGHFSFNRLHGGVISAGLDAMGGLAVMAAIGARHMDETPLQRL
HRFGKLGTIDLRVDYLRPGIGEYFELRAQVMRLGSRVASTRMEFLGADGK
LLSTGSGAYIMS
>Rfer_2941 ABC transporter related
MPAISFQSVSKAYPSPRGPQGSTFLALDRVSLDVEEGEFFGLLGPNGAGK
TTLISILAGLTRANSGTVTVLGHDVQLDYAQARRKLGVVPQELVFDPFFN
VREALRFQSGYFGIRRNDAWIDELLESLGLTDKANANMRQLSGGMKRRVL
VAQALVHKPPVIVLDEPTAGVDVELRQTLWQFISKLNKLGHTVLLTTHYL
EEAEALCGRIAMLKSGRVVALDSTSALLKSGTSNLLRFKIDGELPQTLAA
QARVTGRVVQFPAQDAQAIEQYLAAVREAGLTALDVEIRRADLEDVFLSV
MAANGDEASSPGAVASLQAKGALAT
>Rfer_0320 short-chain dehydrogenase/reductase SDR
MTGSAHQSRPAIFVTGAATGIGRACAERFARHGWFVGLYDIDADGAAEVA
ATLEHGCVVAGALDVTDPDAWRVALAQFWEKSGQRLDVLFNNAGVLTAGP
FETVELARHQGMLNVNVLGMINGCHSAFDYLRRTPGARVINMASATAIYG
QPDLVTYSATKFAVRGFTEGLELEWHRHGIRVSDVWPSFVRTDMAKKFER
IASAKSLGVRLMPDDVAATVWACATSQSLVPKTHWTVGLQARLLAIATSV
SPAPISRWVVRQLAHQT
>Rfer_1316 ABC transporter related
MVRAVVNPPVNLQNPLAPMTNQILDSEPWLNELSHEERAQVQMQLQADEN
VSALLQVDLDNKLCFVPGLVLVTNRRLLSRAPDGSWQAWPYRAGLLLKHH
DHAGVGHLALNDAQGRLAAWCFTLGHNLQAIRLLDQFQIYAQSAVTGLPP
VLLEGRRCPSCKAPLAPDQDECPICTKVIHTPPSTRTLFRLWRFARPYRI
QLFAGFALTLLGTAASLVPPYLAMPLMDEVLIPFQNGQHIDPMLVALYLS
GLFGSALLAWGLSWAKTYILALVSERIGADLRTTTYEHLLRMSLEYFGGK
RTGDLMSRIGSESDRICVFLSLHLLDFASDILMLIMTAVILISINPWLAL
VTLVPLPFIVWMIRSVRFRLQTGFEKIDRVWSQVTSVLADTIPGVRVVKA
FAQEDREAARFREANKHNLAVNDKINKIWSLFSPSVSLLTEWGLLVVWAF
GIWLVSKGDITVGVLMAFIAYISRFYGRLDSMSRIVSVTEKSASAAKRIF
DILDHVSSVPEPTQPVKLERVEGRIELRDVSFRYGNREVNRGVNLTIEPG
EMIGLVGHSGSGKSTLVNLICRFYDVTEGSIRVDGVDVRSFPIADYRRNI
GLVLQEPFLFFGTIADNIAYGKPQASQAEIIAAARAAHAHEFILRLPQGY
DSMVGERGQGLSGGERQRISIARALLIDPRILIMDEATSSVDSETEKEIQ
KALENLVQGRTTIAIAHRLSTLHRANRLVVLDRGEIVEVGTHDDLMAREG
AYFNLYQAQARNMDVDVDDDRRRNVRVDNVKDDK
>Rfer_2722 ABC transporter related
MQPGCEGEERFLQEIQLRELVWALGSCCALHGKPFDPELLLKQHAPPYSA
ATLVTASRALGFQARLLEASSAELARLSTTTIFLLTPAENQPGLGLLVSA
SADAVTWIPAGSNKPNTQPLAEFEARYSGQILLLQPQVEAFNDPDQPQQG
SASFGFRWFVPELLKHRKVWRDVLWASLVLQLLALGLPLFTQAIIDKVIV
HQTQSTLIAIAVGMAIFMVATAVLTWVRQYLVLHTGNRVDAVLAAEVFDH
LFKLPPRYFQNRPTGVVAARLHGVETIREFVSSAAVTLVLDLPFMLIAVA
VMFYYSVPLTLIALGILAVIGILSVLVAPVFQARLNEQFMLGARNQAFLT
EYIAGFETVKSLQFEPQLKAKYSGYLATYLQSGFQTKQIGNTYNVIASTL
EQLMTLLILLVGAWIVMNPSAEAATGKAAVFTIGMLVAFQMFAGKLSQPM
MRLVGLWQQFQQASLAVARLGDLMNAPVEPYSLTPGRQGAGQGRIEIDRI
AFRYADDLPYLYENLSLDIEPGRTIALMGPSGSGKSTLAKLLQGFYWPTN
GQIKLDGIDIRHLSANELRTTFGVVPQETVLFSGTIYDNLALANPHASFE
QVVQACKMAEIHATVEALPQGYQTPIGERGAGLSGGQKQRLAIARALLKR
PKVLIFDEATSALDAETAEHFARTINGLKGKVTMLFITHALPKALRVDEV
IHLGRDGARQMRSVSNPPTPAAGHQVLEGA
>Rfer_2576 Esterase, PHB depolymerase
MNKTLQELMRTATQLTQSGRLNEATQAIQSALRGTAAVSVAPGPVNPWAD
AGSYLLPGAAMQMPSPWMLDGRASKVDARKPGAPDAGGGQFISGTHTHAA
LTCHFKLYIPPGRAGKAMPLVVMLHGCTQDPDDFAAGTAMNERAREQGFF
VLYPQQSPDLNPSRCWNWFEHKHQERGRGEPALIASLTQAVIQQHGIDTR
RVYIAGLSAGGAMAVIVAAAYPELFAAVGVHSGLPSGAASNVAEALMVMK
SGQVGIVERAWGGRADAAAKALLEPPMPIPTIVFHGDQDQTVHPRNGEQV
IAAALGAAAGAQDSHARPSGNARVEQGVSAQGRRYTRSTQHGDQGQALTE
HWLVHGAGHAWSGGHASGSYTDASGPDATLEMLRFFFDHPKTRGNV
>Rfer_3309 MATE efflux family protein
MPSISSLRRLSAPAPRARIGREARALWQLAWPILIGQLANVGMSVVEVAM
AGHASANDLAGVALGVSIWNMVIITLMGVMMAVSPVVAHLVGAREFSQVP
HVVRQALWQALGVGLIAVLLANLAGSVFDHLALQAQVRDLAKDFVVITSL
ALPAFAAYRVLYGYSISLNQTKPVMVIALGALLLNVVVNWLLVFGKLGLP
RLGGLGCAWSTLVCVWFNLLALLWWMRRASAYRSTWPFACFEWPHWPQVR
SLLHLGLPIGITYFAETSAFSLIALLIAKFGSTEMAAHQIALNFSSLVFM
LPLSLGLALLTRVGQALGAGEAHAARFRAWVGVAMALAFAVLSATGMALF
NGQIAAAYTSDEAVAGTAAQLLILAAFFQLSDATQVATSCAIRGYKVTRA
PMLIQLTAFWVFSLPLGYALGLAPKWLPWAPAQPMAARGFWIALVVGLTV
AALGLSALLRFVARQHLPADQHTAISKPT
>Rfer_1734 beta-ketoacyl synthase
MSRRRVVVTGLGCVSPVGNTVADAWANLLAGKSGIELITKFDASSFACKI
AGEVKGFDLGSYIGSKEARTMDTFIHFGIAAASQAVADAGLPTGEALAEE
LAVRIGCLIGSGIGGLPMIEDMHTEFVNRGARRISPFFVPSTIVNMIAGH
VAIRCGFKGPNMAIVSACTTGLHCIGEAGRMIEYGDADVMVAGGSEAAVS
ALGVGGFAAMRALSTRNDDPQTASRPWDRDRDGFVLGEGAGVMVLEEYEH
AKARGARIYAELAGFGMSADAGHMTAPNMDGPRRAMLNAMRNAGVNADQV
DYLNAHGTSTPLGDLNETNAIKAALGEHAKKTVVNSTKSMTGHLLGGAGG
LESIITVLALYHQKSPPTTNIFNQDPECDLDYCANTARDMKIDVALKNNF
GFGGTNGSLVFKRAP
>Rfer_3775 AMP-dependent synthetase and ligase
MDKIWLKNYPPGIAAEVDVHEFASLRDVLRRSCERFAELPAYSNMGASMT
YAELDQHSRDFAAYLQNTLGLNKGERVAVMMPNLLQYPVALFGVLRAGLV
VVNVNPQYTVPELEHQLKDSGAVAIVVLENFAHTLQEVLNRNPALKLNVL
STEVGDMFPVLKEVLTNVVVKYVKKMVPEWHIDGVIEFNAALRAGRDLTL
RHVPLGHDDIAFLQYTGGTTGVAKGAVLTHGNLTANLQQLGAWIAHDLLD
GRELFVCPLPLYHVFALSSSLVFMKIGAHSILITNPRDLPAFIHDLKKYP
FTAIVGVNTLYRALLDTPEFAEVDTRSLKVVIAGGMAVQRVVAERWKKAT
GKPIIEAYGLTETSPGVTANPLNIVDWTGTIGMPFPSTEAAVLDDDGREL
ALGEVGEIGIRGPQVMTGYWNRPDETAKVFTAEGWLRTGDMGFMDERGYF
KITDRKKDMIIVSGFKVFPNQIEDAVALHPGVAEVAAIGAPDERSGEVVK
IIVVRSDPALTEQDLLAHCRQHLTDYKVPKIIEFRTEPLPKTNLGKILRR
QLRALPELPVPTPP
>Rfer_0305 short-chain dehydrogenase/reductase SDR
MKIENAVVLVTGANRGIGLAFARELLARGARKVYATARDPATVTLAGVQA
LQLDVTNAWQVAAAAHQAADVTLVINNAGIAQPGGFLAQDSEAVARRIFE
TNFFGMLNMSKAFAPVLKANGGGALLNVLSVASWVNGGELAAYSASKSAA
WSLTNALRHELAGQKTQVLGLHMAYVDTDLTRGFEVPKSSAEEIVQRALD
GLETGAEEVLADALTQQVRQGLTAPRPGYLPQAN
>Rfer_3141 short-chain dehydrogenase/reductase SDR
MKKIILITGGSRGIGAAIAHLAAEAGYAVCISYLHHRAAAEAVVAAITQK
NGIAMAVQADVAIEEDVIRLFKHVDASFGPLTALVNNAGILERQARVDEM
DSTRIQRIFATNVVGSFICSREAVRRMSTRHAGKGGAIVNMSSRASHLGA
PGEYVDYAASKAAIDTLTIGLAKEVAAEGIRVNAVSPGIIYTDIHASGGD
PQRVDRVKASVPMKRGGYPEEVAKAVLWLLSDDASYTTGASIDVAGGR
>Rfer_0828 isochorismatase hydrolase
MSSHTHPISLQTGDALLIVDVQSDFLPGGSLAVPRGDEVIAVLNGYLAAF
QQARLPVLATRDWHPSKHCSFLPQGGPWPPHCVAGSTGANLAPGLKLPAD
VIVISKATDRSRDAYSGFEGTELDRLLREAGVRRLFIGGLATDYCVLNTV
GDALKLGYQTVLLQDAVRAVDVHPGDGARAMGQMLERGAMAVTLKQIRVV
SP
>Rfer_1463 conserved hypothetical protein
MAVADIFGFHALQLGLPELDALGANRMPHRWLATQTPMPGAAFATDFSAL
PFQANSLDLVVLPHSLELASDPHTTLREVERVLVPEGRVVICGLNPTSLW
GFRQRRGRSPHRVGSQKLFLPEAGEFIGYWRLRDWLRLLGFEVEVGRFGC
YRPAFSSEKWLQRFEWMDRAGARWWPILGSVYFLVAVKRVRGMTLLSPAW
KASRALANAPVSVANSSTLTRASAPKDEKVKQA
>Rfer_0860 ABC transporter related
MGAHAAAMIEVSALEKHFGALKAVADLSFAVQAGEIFGLVGPDGAGKTTT
LRMLAGVMQPDAGSIVIDGIDVRALPEQAKRHVSYMPQRFGLYEDLTVDE
NIRFYADLFEMPSQVWRARADTMLAAADMTPFRQRLAGQLSGGMKQKLGL
VCSLVHTPRVLLLDEPTTGVDPVSRREFWQILYSMRAEGVAMLISTAYLD
EAERCDRLALLHAGAMMYCDTPAGLKARMPGAMLEISATDPRQLLDFVRT
LPGVQGVLLVGIGVHIHVDSRERLAQIEAALAAKGMAVTGIALVEPTIED
LFVALLEQTGSREPA
>Rfer_3833 AMP-dependent synthetase and ligase
MASDRYACHCDGYPGLCPLGGITMTPKPADTLRAPALTCSLSSGATDVPL
IEQTLGDFFDAIVARQPEHEALVSAHQHQRYSYRALQTASNQLASALLGL
GLKPGERVGIWSHNNAQWLLMQLATAKVGLILVNINPAYRVAELGYALNK
VACKVLVTMARFKTSDYLGMLRELAPELDTAQPGALQAARLPHLRTVVWL
DEPGQADEAPGLLRFSTLLASGDAADPRLETIASTLRASDPINIQFTSGT
TGFPKGATLTHRNILNNGFFIGEAMKLTSKDRLCIPVPLYHCFGMVLGNL
ACLTHGATIVYPSDGFDALAVLQTVQDEKCTGLHGVPTMFIAELDHPRFA
EFDLTSLRTGIMAGSPCPIEVMKRVMRDMHMLEVTIAYGMTETSPVSCQS
STTTPLEKRVATVGLVQPHLQVKVIDPVSGETVAPGVSGELCTRGYSVMH
GYWEDPVRTAEAIDEQGWMHTGDLATMDIEGYVNIVGRIKDMVIRGGENI
YPREIEEFLYRHPQIQDVQVVGIPDPKYGEELCAWIIAKPGQTLSEIEVK
AFCKGQIAHYKVPRYIRFVSGFPMTVTGKIQKFKIRDDMKQQLGLQEDKT
A
>Rfer_2560 Acetoacetyl-CoA reductase
MSQKVAYVTGGMGGIGTAICQRLHKEGFKVIAGCGPTRDHAKWLAEQQAL
GFTFHASVGNVGNWVSTVEAFTKAKAEHGSIDVLVNNAGITRDRMFVKMT
RDDWDAVIETNLNSMFNVTKQVVADMVEKGWGRIINISSVNGAKGQAGQT
NYSAAKAGMHGFTMALAQELATKGVTVNTVSPGYIGTDMVKAIRQDVLDK
IIATVPVKRLGEPSEIASIIAWIASDEGGYSTGADFSVNGGLHMG
>Rfer_0813 short-chain dehydrogenase/reductase SDR
MSAPPSTRTVLVTGAAKRLGREIALALAKDGWQVAVHYRDSLEDARKTVA
DCADLAGASALFRANLTNEAAVRHLLPQVIAQFGRVDAIVNSASTFEHDS
AASFSFAAMDKHMRSNAGAAIILSEALHAHVVGRDGPASAQARRPLGVVV
NLLDQKLWNQNPDFFSYTLSKAALEAANTMLALALAPHLRVVGVAPGLTL
TSHLLNHDKFEALHQLSPLGRSSTAADVAATVKFAIDNQSITGTTLLVDG
GQHLMKFERDFSML
>Rfer_0613 fumarylacetoacetate (FAA) hydrolase
MKLATYKDGSRDGQLVVVARDLSIAHYATGIAHQLQQVLDDWNFLSPQLQ
DLYDALNRARDSSASAGLARHAFPFDPRQCMAPLPRAYQWVNGSVYRNPA
ALQGPASTAGSPVLYQGASDDFLGPCDEVHCAREADGIDFEAGVAIITGD
VRLGASPAQALDGIRLLLLSNALSLRQLMQAELAQGLGPLQSRPATAFSP
VAVTPDEVGTAWAQGRLDLTLQSSWNGRKVGLCEAGPEMRFHFGQLIAHL
CKTRRLRAGCIVGAGAVSNTDASHGYSCIADKRALEIMQDGQPMTEFMKF
GDTIRIEMKGRDGQSVFGAIEQEIVPLEKAAAPL
>Rfer_3416 conserved hypothetical protein, potential methyltransferase
MSPKEFPKLADAESALAVLQAESSFAAVPVPKYLQETYWWAYVHPNAVRV
FERQWLVNLILWGNFARLRDAALHELGSVIDGKVLQVACVYGNFTEYLVK
RLGPNGHLDVIDVAPVQITNLHTKLKDSRQVTVQRQDSTDMQFEDASRDA
VVVFFLLHEQPVEARHKTIAEALRVTKPGGKLVFVDYHRPVAVNPFRYIM
VPILTTLEPFAMDMWRGEITDWLPADIPVAKVEKQTFFGGLYQKVVVTR
>Rfer_3493 ABC transporter related
MRHAGGSTHVFPAAPSAPTPAAARSDWATLRRLFPYLWEYKWRVMAALAF
MVAAKTANVGVPLLLKQLIDTMNPKGGIDATALLVVPAALLLAYGLLRLS
TTLFAELRELVFAKATEGASRTISLQVFRHLHALSLRFHLERQTGGLTRD
IERGTRAVNSLISYSLYSIIPTLIEVTMVLSYLAIKFDIWFALITIIALV
FYISFTVSVTEWRTKFRRQMNELDSKAHSRAIDSLLNFETVKYFNNEEFE
AHRYDENLKNYRLAALKSQRTLSLLNTGQQLIIATGLVAMLWRATQGVVE
GHMTLGDLVMVNAFMIQLYIPLGFLGVLYREIKQSLTDLDKMFTLMERER
EIADVPGAQPLKVDGANVTFSHVSFAYEAARPILHDISFEIPAGKTVAVV
GPSGSGKSTLARLLFRFYDVQQGQILIAGQDIKQVTQASVRQAIGIVPQD
TVLFNDTVEYNIAYGKPGATREQVEEAARSAHIHNFISATPKGYDTMVGE
RGLKLSGGEKQRVAIARTLLKNPPILIFDEATSALDSANERAIQAELQSV
AQNKTTLVIAHRLSTVVDAHEILVMDAGRIIERGSHAELLAANGRYAEMW
ALQQSSAD
>Rfer_2204 short-chain dehydrogenase/reductase SDR
MDIAGKVFIVTGGASGLGEGTARMLAAKGGKVVIADMQVEKGEAIAKDIG
GAFVKCDVAQEADGQAVVAKAVSMGKLMGLVNCAGIAPAEKTVNKNGAHN
LAVFTKCITVNLIGSFNMIRLAADAMCKNEPEATGERGVLISTASVAAYD
GQIGQAAYSASKGGIVGMTLPIARDLARNGIRNMTIAPGIFGTPMMFGMP
QEVQDSLAASVPFPSRLGTPLDYAKLAQHIFENDMLNGEVIRLDGAIRLA
PR
>Rfer_3133 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e
MKLLRYGLPGQEKPGVLDAQGRVRDLSGVITDVAGAVLLPESLARLRGVN
MESLPLVAGTPQKDLRLGACVGKVGKFICIGLNYSDHAAESGMQVPPEPV
VFNKWTSAIVGPDDAVEIPRGSVKTDWEVELGVVIGQGGRYIEEADALSH
VAGYCVVNDVSEREFQLDRSGTWDKGKGCDTFGPTGPWLVTADEVPDPQA
LKLWLEVDGKRYQDGSTSTMVYGVKFLISYLSRFMSLQPGDIISTGTPPG
VGLGQKPPVYLRAGQTMHLGIEGLGHQTQTTVQA
>Rfer_2856 putative GAF sensor protein
MSHSSHPAVASPRTTSPALRLAGIEQARRTALLEHATLPAGWIAPWIERS
WQRCIDLGLQHHEAATFSQVSTPQMRRTLEASQQLVQTAKPVLEHLARAI
VNTRYFAILTNACGVVVDASGAIDHSDPRAHLITRVGTDLSERSIGTTAI
GTALTELQPVWLHRGEHFFETTSVYSCAGAPLFGPDGACVGMLDLTGIDA
QERPELKHLVVQSASKIENALVTAQAHALLLRLNWPGNILGTDADGILCL
DADGWVTGANPVARQMVPGLAIAGVVAVHISEMFGIPYEQLFGAAKRPGS
ALELPLWSGLRLQAQVIARADETHPLQSSPASAPPLALRDVEAAMIRQAV
VDARGSVGQAARALGISRATVYRKLGQKST
>Rfer_1011 putative transcriptional regulator, TetR family
MITEVVVSPWKSKQDRRQGRSVKKDAVLLAAARLFNERGFAGTSLDDIAQ
SLNVTKPTLYYYIENKEQVLFECVKRGLEVLRESIRAATQHGLQARDCLR
IAMENYAEVVTSDFGLCVIRVGEDPLSEAKRQEMRALKREIDAEFHQLIE
QGMDEGWIAQGDSKIASFTVVGALSGIGRWYRPGVHGARSLQEAVQHCIE
MLMHGALNMPTHADSAALDGAVAPNFQQLGAERQLMEAAMPQIRRELHSG
GRMIRCFYQRPSTIAEMLIVALEQNPDGEALVVSGLHLTWRELYTAATRC
AAGLSGRGVAPGERVAMFMANCSEFVIATYACAWIGAVVVPINARARTPE
VQYILEDSGATVLLCASDLAQMVPATAAVPGLMHRFVAGPTVAAPFESFS
VLMQESPLATPTMRQEEDLAALLYTSGTTGKPKGAMLSHLNIVHSAMNFA
LTMQLTNQDRSMLAVPMNHVTGLVGQLYTMLYCQGCVVVMPQFKALEFAR
LAALERITHTVMVPAMYNLCLLLPGLADHDLSRWRIGAFGGSPMPPASIE
ALARKLPTLALMNAYGATETSSPAAIMPADMTNGRTDSVGITVPCGEICV
VDETGCEMPHGKIGELWIKGPMVVGGYWNNPEATATEFCDGYWRSGDIGT
MDTQGFVRILDRKKDVINRGGYKVFCAEVENLLAQHSAVIESAVVGVPCS
VLGERVHAFVCVSVLDDSTQAQAFQALCSAELSDYKVPETWTIGTDPLPR
NPNGKVMKRELRRSMHAALT
>Rfer_0169 secretion protein HlyD
MKTNLKTAITSALLLAAAAAALLGWGPWREQGLGEGFVSGNGRIEATEIA
IATKLAGRVERILVAEGEFVKAGQPLAQMQIESLQAQREEALARLQQAQQ
AVSGAEVQVAQQEANYQATLAVVAQRESDLDTAQRRLPRSEKLAQEGFFS
SQLLDDDRAKVRSLQASVSAAKSQAKAAQVGISAARNQISGAQANVRALE
ATLARIDVELADSELKSPRDGRVQFLVAQPGEVLGGGGRVLNLVDLSDVY
MTFFLPETVAGRVALGSDVRIVLDAAPQFVIPAKVSFVASTAQFTPKTVE
TASERQKLMFRVRAQIDPGLLQRHLEQVKTGLPGVAWLKLDSKAQWPSHL
TVKAEP
>Rfer_0170 response regulator receiver domain protein
MTLAPASPPVARLQGVTLRYKKNTALNDVTLDIPAGCMVGLIGPDGVGKS
SLLALVAGARAVQLGRVEVLGGDMARRLHRQAVCPNIAFMPQGLGKNLYP
TLSVEENLQFFARLFGHDVSERRRRIDGLTRSTGLHPFLARPVGKLSGGM
KQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWELITRIRGQHPGMSV
VVATAYMEEAQRFDWLVAMDDGRVLDTGTPTELLARTGHSTLESAFIAML
PEEKRRGHQRVEIVPLTLDDQAEVAIEARDLTMRFGDFVAVDHVSFRIQR
GEIFGFIGSNGCGKSTTMKMLTGLLPASEGQAWLFGKLVDSRDMATRSRV
GYMSQSFSLYGELTVQQNLALHARLFHVPDADLLSRVAESLARFGLREVQ
DALPEQLPLGMRQRLSLAVATVHKPELLILDEPTSGVDPIARDNFWRLMI
ELARRDKVTIFISTHFMNEAERCDRISLMHAGQVLESASPAQIMAKRGAA
TLEDAFIGYLKDADGDAVDDTTGAPLSTETPAVVPAPDPVGAALGQTPAK
GLAARLRRSLARIYSYQWRESLELQRDPVRGALALLGSLLLMFVMGYGIS
MDVGNLRFAVLDRDQTTLSRDYTLNLAGSRYFVERPPITDYAELDRRMRS
GELSLALEIPPGFARDVARGQSVQIGAWIDGAMPQRAETVIGYAQGMHQQ
WYAQQVRDQTGITPSSLISVETRYRYNPDVRSLPAMVPAVIPLLLLMLPA
MLTALAVVREKELGSIINLYVTPVTRTEFLIGKQLPYLMLAMFNYGLMCL
AAVTVFGVPMTGSFATLTLAALIFSVCSTGMGLLASTVTRSQIAAMFFAM
VGTMLPAVQFAGLINPVSSLEGSGRWIGEIYPASHMLTISRGVFSKALGF
ADLQASFWPMLVAVPVIMGLAIVLLKKQEA
>Rfer_4047 3-oxoacyl-(acyl-carrier-protein) reductase
MTAPRLLNKVSLITGAAQGIGLATALKFAAEGAIVIVCDIKQAGVDEAVA
QCRALGATAAGFVADVTQRTTIDALVASVKAQFGRIDVLVNNAGITQDAR
LQKMTLEQFDRVIDVNLRGVFHCAQAVADLMVAQGSGVILNASSVVGIYG
NFGQTNYAATKFGVIGFTKTWSRELGPKGIRVNAVAPGFITTPMVAAMPE
KVLQDLQAKVPLKRLGKPEEIANVYAFLASDEASYINGAVIEVSGGMSL
>Rfer_2601 acriflavin resistance protein
MWFTRVSLKNPVFATMVMLAIVVLGLFSYQRLQVDQFPNVDFPVVVVTTE
YPGASPEIVESEVTKKIEEGVNSIAGINALTSRSYEGQSVVIIEFQLHII
GRKAADDVREKVALLRPTLRTEVKEPRVLRFDPSSRAVWSVAVLPDTPKP
GANSAAKVLSDVELTNWADQTLRKRLENVRGVGSVTVVGGTKREINIYLQ
PQALEAFGISSEQVVAAVSNENQDLPMGAIRSLEQERVVQIEARMQRPED
FGKIIVARKNGAPVRVDQIARVVDGAQETDSLALYNGQRTLLLSVQKSQD
ENTIGVIDGLTQTLAEMQTQLPPGVRLEPVTDGSRQIRVSVSNVRETLFE
GALLTILIVFLFLNSWRSTIITGLTLPIALIGTFLFMNLFGFTINMVTLM
ALSLCVGLLIDDAIVVRENIVRHVQMGKKAFPAAMDGTQEIGMAVMATTM
SIVAVFLPIGFMGGIIGKFFHEFGVTIVAAVLISMFVSFTLDPMLSSIWN
DPSIEAHRHHGLNADGTPRQPVTFYDKTIGRVTGWFDHATEVLIDSYQGI
LGWALVHKLKTLFVALAIFVASIFMVPLLGTEFVPAADFSETTLNFYTPM
GSSLEVTEARTKQVEAIVRSYPEVRYTLATINTGAAVGKSYASVYVRLVD
RKNRSRNVNELSDMLRQRLKQVAGITVTHVGLMDPVGGQKQVEFSLQGPD
QTELERISRLVLDKVRPIPGLVDLDSSIKPNKPTLNVTVRRDAASDLALS
IGQIASALRTLVAGQTVGNWRASDDQTYDVNVRLAPEARNSPDDLQRLPF
TLGANADGSARIVRLNQVATVHESTGSNQINRRDMTREVAVNANVYQRSA
GEVSNDIKSALESVNFPPGYRYQFGGSTKNMAESFGYAISALVLAIVFIY
MILASQFKSFFQPLALMTALPLTLIGVVLALLMFHSTLSIFSVIGIVMLM
GLVTKNAILLVDFAIRAREDGLERSAALLMAAKVRLRPILMTTLAMIFGM
LPLALALTEGSEQRAPMGQAVIGGVITSSLLTLVVVPVVYCYMDDLAQWL
RRRWGADNSTDEAGAG
>Rfer_4114 Phenylacetic acid degradation-related protein
MTKYHYGLADSQEAATLSGKALLQAIIEGRLPQAPISQTMSFWLVEVGDG
FAAFEGEPGKQLLNPMGTVHGGWALTLIDSAAGCAGLSLLPAGVGYTTVE
TKGNFSRPIAPDAGRVRAHAQVVAQGRQIISVEAKVLSQDGRVLAHGSST
LMVLAGRPASS
>Rfer_3136 short-chain dehydrogenase/reductase SDR
MDLHLKDKVVIVTGGASGIGAAISLTLAQEGAIPVILGKSPMPAEFAQQL
LALAARQLFIQVELSDDAACRAAVEQVVRDLGRVDGLVNNAGINDNVGLD
AGRDAFVGSLERNLIHYYVMAHYCVPHLKASKGAIVNVSSKTAVTGQGNT
SGYCASKGAQLSLTREWAAALLGDGVRVNAVIPAEVMTPLYARWINSFDD
AQEKLSSITQKIPLGHRMTTSEEIARMCVFLLSDASSHTTGQWIFVDGGY
THLDRALS
>Rfer_3999 beta-ketoacyl synthase
MSKAPGRRVAVTGVGMVSPFGGDTDDFFDRIMRGESAIRLYEHPTSPSRL
VQPAVTCAQFDSEKSIGHAITHVTDRYSQLGVAAAFSAWDDAGLKREGAG
SDEYGVSWGTAAGGMLTYEKGYGDMYLRGKQRVSPLSVPMAMNNAAASHI
AMALGLGSACMTYSMACASSTVSIGEAFRRIQRGESSLIVAGGSESPLAF
TIMRAWEAMRVVAAGDEQTAYRACRPFQQGRTGLVLGEGAAALVLEDWEH
ARQRGARVYCELAGFGQSCDHTHLVRPDAQGQSRAIMAALHEAELAPAQV
GYVNAHGTATVEGDPIEISALRQVFGVHAGQLAVSATKSMHGHSLGAVGA
MEALITVLALARKAIPPTAHLEQVAPDCLGVQHVMGSGLRDVPLQAAISN
SFAFGGSNAVLAFRATSDA
>Rfer_1551 secretion protein HlyD
MSINSIQFRATLIATVLLLAACSRPAPSEEPVRAVKVITVGLARMDSGAE
FAGEVRARVESRLGFRVGGKIVRRQVELGQRVKAGQVLAQLDPLDYQLAA
QAARAQVAAAVSSQELAASDFKRYQDLRERNFISAAELERREAGLKAAQA
QLAQAQAQSGGQGNQASYTTLVADVAGVVTAVEAEPGQVVAAGTPVVRVA
QDGPRDVAFAVPEDQVALIKTGAAVVVRGWSGAASVNGVVREVAASADPV
TRTFGVKVALGAQDTLALGSTVTVLLSSLDRGAAPAIKLPTSALRQDGKS
QAVWVLDKPSMTVRLQPVQIATVDGNEVVLAGGLQPGMQVVVAGVHVLSP
GQKVTIYKENKALASVNTTQAATNSVAVSVPPGATPAPAASAASAVAK
>Rfer_4105 secretion protein HlyD
MKNYFKPRWIALAVALASLLGVASFALTERASDAKKPATADKPALTVNAT
QPQSTTLPRKISANGNLAAWQEASIGTEANGLRLAEVRVNVGDVVKRGQV
LATFAPDTIQADLAQMRAGMAEAEATLAEAAANAQRARELQTTGALSAQQ
ISQYLTAERTAQARVDAQRAMATTQQLRLAQTQVLAPDSGVISARSATVG
AVLPAGQELFRMIRQGRIEWRAEIPAVDLASLRSGMVATITPAGGVPIKG
TVRMVAPTVDAATRNGIVYVDLPAPGAAKVGMFARGEFTLGSAEALTLPQ
TAVLLRDGFSYVLRIGPDSKVAQTKVSIGRRAGDRVEITGGLDPKARVVA
GGGGFLSDGDTVRVVETATPVKTASNASGVSAK