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2024-05-02 13:54:55

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Jannaschia sp. CCS1, CCS1

Number of genes found: 166

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Jannaschia sp. CCS1, CCS1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Jann_1324 short-chain dehydrogenase/reductase SDRchromosome CDS1289505 735 + 0.642177
NA Jann_2522 Methyltransferase type 11chromosome CDS2522432 813 - 0.670357
NA Jann_2616 AMP-dependent synthetase and ligasechromosome CDS2635047 2715 - 0.670718
NA Jann_0014 Nicotinamidasechromosome CDS13339 594 + 0.621212
NA Jann_2535 Methyltransferase type 12chromosome CDS2536694 603 + 0.6534
NA Jann_2429 Phenylacetic acid degradation-related proteinchromosome CDS2423186 408 - 0.669118
NA Jann_2257 hypothetical proteinchromosome CDS2263686 273 - 0.608059
NA Jann_2106 short-chain dehydrogenase/reductase SDRchromosome CDS2114996 735 - 0.636735
NA Jann_2051 Phytanoyl-CoA dioxygenasechromosome CDS2055759 837 + 0.616487
NA Jann_3813 short-chain dehydrogenase/reductase SDRchromosome CDS3901351 702 + 0.636752
NA Jann_3500 5-carboxymethyl-2-hydroxymuconatedelta-isomerasechromosome CDS3555481 855 - 0.60117
NA Jann_3198 putative polyhydroxybutyrate depolymerasechromosome CDS3238015 840 + 0.652381
NA Jann_2269 short-chain dehydrogenase/reductase SDRchromosome CDS2276251 765 - 0.648366
NA Jann_0667 AMP-dependent synthetase and ligasechromosome CDS637055 1722 + 0.657956
NA Jann_3119 AMP-dependent synthetase and ligasechromosome CDS3158580 1458 + 0.624829
NA Jann_2315 AMP-dependent synthetase and ligasechromosome CDS2319221 1437 + 0.659708
NA Jann_2148 beta-ketoacyl synthasechromosome CDS2155412 1206 + 0.64262
NA Jann_2147 phosphopantetheine-bindingchromosome CDS2155130 279 + 0.591398
NA Jann_1399 short-chain dehydrogenase/reductase SDRchromosome CDS1369457 762 + 0.67979
NA Jann_0869 5-carboxymethyl-2-hydroxymuconatedelta-isomerasechromosome CDS825338 816 + 0.622549
NA Jann_1525 Twin-arginine translocation pathway signalchromosome CDS1494831 1011 + 0.602374
NA Jann_0923 protein of unknown function DUF938chromosome CDS880364 675 - 0.693333
NA Jann_2966 thioesterase superfamilychromosome CDS2985936 504 - 0.646825
NA Jann_3920 short-chain dehydrogenase/reductase SDRchromosome CDS4017152 774 - 0.652455
NA Jann_3711 Methyltransferase type 12chromosome CDS3795350 1083 - 0.613112
NA Jann_4031 type I secretion target repeat proteinchromosome CDS4135300 1392 + 0.627155
NA Jann_1010 histone deacetylase superfamilychromosome CDS965077 1101 - 0.627611
NA Jann_1151 AMP-dependent synthetase and ligasechromosome CDS1112796 1551 + 0.649903
NA Jann_2039 fumarylacetoacetate (FAA) hydrolasechromosome CDS2044603 918 + 0.605664
NA Jann_2917 cytochrome P450 family proteinchromosome CDS2939069 1257 + 0.599045
NA Jann_2592 short-chain dehydrogenase/reductase SDRchromosome CDS2603614 2103 - 0.630528
NA Jann_2277 short-chain dehydrogenase/reductase SDRchromosome CDS2283967 780 + 0.623077
NA Jann_0492 Acetoacetyl-CoA reductasechromosome CDS490688 723 - 0.616874
NA Jann_2272 Cytochrome P450-likechromosome CDS2278410 1221 - 0.612613
NA Jann_2271 short-chain dehydrogenase/reductase SDRchromosome CDS2277670 744 - 0.638441
NA Jann_1737 ABC transporter relatedchromosome CDS1729396 738 - 0.638211
NA Jann_1629 beta-ketoacyl synthasechromosome CDS1615493 1257 + 0.640414
NA Jann_1054 DSBA oxidoreductasechromosome CDS1008141 600 + 0.656667
NA Jann_1256 AMP-dependent synthetase and ligasechromosome CDS1212170 1722 + 0.611498
NA Jann_2374 short-chain dehydrogenase/reductase SDRchromosome CDS2379387 756 + 0.652116
NA Jann_1439 Homogentisate 1,2-dioxygenasechromosome CDS1406329 1383 - 0.621837
NA Jann_0774 short-chain dehydrogenase/reductase SDRchromosome CDS733286 741 - 0.668016
NA Jann_3274 histone deacetylase superfamilychromosome CDS3327573 1128 + 0.682624
NA Jann_0654 phenylacetic acid degradation Bchromosome CDS624757 291 - 0.646048
NA Jann_0551 short-chain dehydrogenase/reductase SDRchromosome CDS538707 828 - 0.642512
NA Jann_4125 amidohydrolasechromosome CDS4233059 1230 + 0.621951
NA Jann_1656 beta-ketoacyl synthasechromosome CDS1639749 1230 + 0.626829
NA Jann_2670 cytochrome P450chromosome CDS2680813 1227 + 0.652812
NA Jann_1830 Asp/Glu racemasechromosome CDS1816772 741 + 0.662618
NA Jann_0133 Phytanoyl-CoA dioxygenasechromosome CDS121806 795 + 0.626415
NA Jann_4017 short-chain dehydrogenase/reductase SDRchromosome CDS4120509 738 - 0.640921
NA Jann_3765 5-oxoprolinase (ATP-hydrolyzing)chromosome CDS3847193 2073 + 0.659913
NA Jann_3499 2-oxo-hepta-3-ene-1,7-dioic acid hydratasechromosome CDS3554684 801 - 0.636704
NA Jann_4163 Protocatechuate 3,4-dioxygenase, beta subunitchromosome CDS4273173 717 + 0.598326
NA Jann_2276 Cytochrome P450-likechromosome CDS2282703 1227 + 0.591687
NA Jann_0183 amine oxidasechromosome CDS175691 1572 + 0.61514
NA Jann_1627 acyl carrier proteinchromosome CDS1613897 234 + 0.564103
NA Jann_3766 isochorismatase hydrolasechromosome CDS3849267 606 + 0.60066
NA Jann_2490 Hemolysin-type calcium-binding proteinchromosome CDS2487836 2502 - 0.623102
NA Jann_2658 Methyltransferase type 12chromosome CDS2669528 366 + 0.622951
NA Jann_1899 Twin-arginine translocation pathway signalchromosome CDS1888232 1086 + 0.611418
NA Jann_2362 Methyltransferase FkbMchromosome CDS2366990 777 - 0.606178
NA Jann_3787 short-chain dehydrogenase/reductase SDRchromosome CDS3871436 747 - 0.635877
NA Jann_1322 short-chain dehydrogenase/reductase SDRchromosome CDS1286131 690 + 0.64058
NA Jann_0364 putative polyhydroxybutyrate depolymerasechromosome CDS366992 798 - 0.677945
NA Jann_2275 amidohydrolasechromosome CDS2281338 1353 + 0.594974
NA Jann_1922 Phenylacetic acid degradation-related proteinchromosome CDS1910024 405 - 0.679012
NA Jann_3930 short-chain dehydrogenase/reductase SDRchromosome CDS4027199 711 - 0.644163
NA Jann_1336 short-chain dehydrogenase/reductase SDRchromosome CDS1302260 1257 + 0.630867
NA Jann_3779 TRAP C4-dicarboxylate transport system permease DctM subunitchromosome CDS3863621 1284 - 0.616044
NA Jann_3811 5-oxoprolinase (ATP-hydrolyzing)chromosome CDS3897542 2082 + 0.627762
NA Jann_2979 AMP-dependent synthetase and ligasechromosome CDS2997860 1632 + 0.622549
NA Jann_3130 conserved hypothetical proteinchromosome CDS3171776 279 - 0.645161
NA Jann_2022 Methyltransferase type 11chromosome CDS2025402 786 + 0.533079
NA Jann_4110 short-chain dehydrogenase/reductase SDRchromosome CDS4218540 690 - 0.666667
NA Jann_0984 Phenylacetic acid degradation-related proteinchromosome CDS940626 468 - 0.604701
NA Jann_2832 short-chain dehydrogenase/reductase SDRchromosome CDS2849080 735 + 0.651701
NA Jann_0950 Phytanoyl-CoA dioxygenasechromosome CDS907639 693 - 0.63925
NA Jann_3686 ABC transporter relatedchromosome CDS3768285 609 + 0.65353
NA Jann_0294 conserved hypothetical proteinchromosome CDS302000 882 - 0.614512
NA Jann_2036 hypothetical proteinchromosome CDS2041966 543 + 0.626151
NA Jann_3883 short-chain dehydrogenase/reductase SDRchromosome CDS3980597 810 - 0.618519
NA Jann_0143 amine oxidasechromosome CDS133255 1560 - 0.609615
NA Jann_3642 CsgA, Rossman fold oxidoreductasechromosome CDS3715453 660 - 0.634848
NA Jann_3834 short-chain dehydrogenase/reductase SDRchromosome CDS3927709 771 - 0.612192
NA Jann_3724 Methyltransferase type 11chromosome CDS3809191 723 + 0.656985
NA Jann_3681 Hemolysin-type calcium-binding proteinchromosome CDS3759200 4389 + 0.619959
NA Jann_3687 protein of unknown function DUF214chromosome CDS3768890 2523 + 0.671819
NA Jann_1025 Phenylacetic acid degradation-related proteinchromosome CDS978163 504 - 0.623016
NA Jann_2719 Mammalian cell entry relatedchromosome CDS2727224 456 - 0.607456
NA Jann_2360 Methyltransferase FkbMchromosome CDS2365397 783 - 0.590038
NA Jann_2967 Phenylacetic acid degradation-related proteinchromosome CDS2986436 456 - 0.651316
NA Jann_0091 histone deacetylase superfamilychromosome CDS85871 924 - 0.654762
NA Jann_3764 5-oxoprolinase (ATP-hydrolyzing)chromosome CDS3845502 1695 + 0.647788
NA Jann_0405 short-chain dehydrogenase/reductase SDRchromosome CDS408228 750 + 0.650667
NA Jann_3001 isochorismatase hydrolasechromosome CDS3021329 558 + 0.639785
NA Jann_3190 short-chain dehydrogenase/reductase SDRchromosome CDS3232070 654 + 0.603976
NA Jann_3757 TRAP dicarboxylate transporter-DctM subunitchromosome CDS3839056 1308 - 0.63685
NA Jann_4164 Protocatechuate 3,4-dioxygenase, alpha subunitchromosome CDS4273889 546 + 0.615385
NA Jann_3339 hypothetical proteinchromosome CDS3390272 1026 - 0.61501
NA Jann_0677 cytochrome P450chromosome CDS649494 1209 - 0.627792
NA Jann_0957 Methyltransferase type 11chromosome CDS916742 555 - 0.67027
NA Jann_2396 cytochrome P450chromosome CDS2396921 1350 - 0.660741
NA Jann_1498 Hemolysin-type calcium-binding proteinchromosome CDS1468939 849 + 0.57715
NA Jann_3923 5-carboxymethyl-2-hydroxymuconatedelta-isomerasechromosome CDS4019955 819 - 0.636142
NA Jann_1043 conserved hypothetical proteinchromosome CDS999250 762 + 0.65748
NA Jann_0503 Methyltransferase type 11chromosome CDS499981 594 - 0.638047
NA Jann_1738 protein of unknown function DUF140chromosome CDS1730243 783 - 0.680715
NA Jann_3733 cytochrome P450 family proteinchromosome CDS3816248 1155 - 0.608658
NA Jann_1458 short-chain dehydrogenase/reductase SDRchromosome CDS1427403 723 + 0.64592
NA Jann_0846 short-chain dehydrogenase/reductase SDRchromosome CDS801135 744 - 0.639785
NA Jann_1557 hypothetical proteinchromosome CDS1528191 2046 + 0.573314
NA Jann_3518 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS3575092 636 + 0.624214
NA Jann_0310 Methyltransferase FkbMchromosome CDS317627 735 + 0.62585
NA Jann_3773 Asp/Glu racemasechromosome CDS3857079 777 - 0.643501
NA Jann_3708 Methyltransferase type 12chromosome CDS3792397 705 - 0.570213
NA Jann_1626 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS1612928 738 + 0.650406
NA Jann_3082 TRAP dicarboxylate transporter-DctM subunitchromosome CDS3116249 1317 - 0.584662
NA Jann_2316 DSBA oxidoreductasechromosome CDS2320654 666 + 0.65015
NA Jann_1428 Phytanoyl-CoA dioxygenasechromosome CDS1397840 1149 + 0.669278
NA Jann_0664 short-chain dehydrogenase/reductase SDRchromosome CDS635059 765 + 0.654902
NA Jann_2311 3-hydroxybutyrate dehydrogenasechromosome CDS2315961 786 + 0.614504
NA Jann_3594 Methyltransferase FkbMchromosome CDS3670899 714 + 0.630252
NA Jann_1460 short-chain dehydrogenase/reductase SDRchromosome CDS1429291 708 + 0.637006
NA Jann_1207 short-chain dehydrogenase/reductase SDRchromosome CDS1167701 780 + 0.660256
NA Jann_1344 aromatic-ring-hydroxylating dioxygenase, beta subunitchromosome CDS1310074 480 + 0.585417
NA Jann_2512 short-chain dehydrogenase/reductase SDRchromosome CDS2511368 600 + 0.646667
NA Jann_1703 short-chain dehydrogenase/reductase SDRchromosome CDS1686317 732 - 0.677596
NA Jann_3778 TRAP dicarboxylate transporter-DctP subunitchromosome CDS3862587 1038 - 0.612717
NA Jann_1165 putative hydratase proteinchromosome CDS1130993 756 + 0.57672
NA Jann_3812 5-oxoprolinase (ATP-hydrolyzing)chromosome CDS3899628 1707 + 0.644991
NA Jann_1334 AMP-dependent synthetase and ligasechromosome CDS1299472 1617 + 0.622758
NA Jann_1106 short-chain dehydrogenase/reductase SDRchromosome CDS1066949 756 + 0.652116
NA Jann_2906 short-chain dehydrogenase/reductase SDRchromosome CDS2926037 768 + 0.628906
NA Jann_3283 short-chain dehydrogenase/reductase SDRchromosome CDS3335317 762 + 0.65748
NA Jann_0772 peptidase S58, DmpAchromosome CDS731621 1071 - 0.69281
NA Jann_2105 5-carboxymethyl-2-hydroxymuconatedelta-isomerasechromosome CDS2114134 849 - 0.623086
NA Jann_1289 isochorismatase hydrolasechromosome CDS1251841 633 - 0.545024
NA Jann_3578 conserved hypothetical proteinchromosome CDS3653705 1344 + 0.625744
NA Jann_3221 hypothetical proteinchromosome CDS3268508 270 + 0.548148
NA Jann_0956 Homospermidine synthasechromosome CDS915177 1422 + 0.628692
NA Jann_1367 Hemolysin-type calcium-binding proteinchromosome CDS1332803 2274 + 0.585312
NA Jann_2615 short-chain dehydrogenase/reductase SDRchromosome CDS2634301 774 + 0.603359
NA Jann_0010 hypothetical proteinchromosome CDS10410 1278 + 0.621283
NA Jann_1436 fumarylacetoacetasechromosome CDS1403871 1251 - 0.658673
NA Jann_1321 short-chain dehydrogenase/reductase SDRchromosome CDS1285222 849 + 0.645465
NA Jann_0657 Phenylacetic acid degradation protein PaaDchromosome CDS627643 432 - 0.636574
NA Jann_2910 Cupin 2 proteinchromosome CDS2930273 1074 + 0.634078
NA Jann_1961 Methyltransferase type 12chromosome CDS1955009 726 + 0.669421
NA Jann_0181 O-methyltransferase, family 2chromosome CDS173582 1137 - 0.614776
NA Jann_0620 N-acyl-L-homoserine lactone synthetase-likechromosome CDS593454 588 + 0.608844
NA Jann_2308 Indigoidine synthase A like proteinchromosome CDS2311914 909 + 0.673267
NA Jann_2913 AMP-dependent synthetase and ligasechromosome CDS2933111 1890 - 0.593122
NA Jann_3245 N-acyl-D-amino-acid deacylasechromosome CDS3294400 1605 - 0.6081
NA Jann_2499 Methyltransferase type 12chromosome CDS2497957 612 + 0.645425
NA Jann_3780 Tripartite ATP-independent periplasmic transporter, DctQ componentchromosome CDS3864928 528 - 0.604167
NA Jann_1567 AMP-dependent synthetase and ligasechromosome CDS1543349 1485 + 0.651852
NA Jann_1345 short-chain dehydrogenase/reductase SDRchromosome CDS1310550 726 + 0.637741
NA Jann_2909 5-carboxymethyl-2-hydroxymuconatedelta-isomerasechromosome CDS2929584 693 + 0.629149
NA Jann_2204 Esterase, PHB depolymerasechromosome CDS2213128 1104 + 0.608696
NA Jann_1066 Hemolysin-type calcium-binding proteinchromosome CDS1025899 2853 + 0.628111
NA Jann_2363 Methyltransferase FkbMchromosome CDS2367763 909 - 0.588559
NA Jann_1726 cytochrome P450chromosome CDS1715793 1164 - 0.658935
NA Jann_2566 5-oxoprolinase (ATP-hydrolyzing)chromosome CDS2571101 3558 - 0.6543
NA Jann_3776 short-chain dehydrogenase/reductase SDRchromosome CDS3860660 780 + 0.658974
NA Jann_3084 TRAP dicarboxylate transporter-DctP subunitchromosome CDS3118189 1002 - 0.61477