Gene list
Applied filters:
COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Rhodospirillum rubrum ATCC 11170, ATCC 11170
Number of genes found: 98
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Rhodospirillum rubrum ATCC 11170, ATCC 11170 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Rru_A0045 | Beta-ketoacyl synthase | SubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; EC=2.3.1.41; Flags: Precursor; | chromosome | CDS | 46946 | 1215 | + | 0.647737 |
| NA | Rru_A2126 | 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e | SubName: Full=5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; EC=4.1.1.68; | chromosome | CDS | 2468818 | 843 | - | 0.65599 |
| NA | Rru_A0934 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1112304 | 1722 | + | 0.606272 |
| NA | Rru_A0194 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 237356 | 288 | + | 0.583333 |
| NA | Rru_A2553 | Methylase involved in ubiquinone/menaquinone biosynthesis-like | SubName: Full=Methylase involved in ubiquinone/menaquinone biosynthesis-like; | chromosome | CDS | 2968578 | 690 | + | 0.710145 |
| NA | Rru_A2350 | Methylase involved in ubiquinone/menaquinone biosynthesis-like | SubName: Full=Methylase involved in ubiquinone/menaquinone biosynthesis-like; | chromosome | CDS | 2728599 | 966 | - | 0.650104 |
| NA | Rru_A3231 | ThiJ/PfpI | SubName: Full=ThiJ/PfpI; | chromosome | CDS | 3725576 | 684 | - | 0.666667 |
| NA | Rru_A1944 | DSBA oxidoreductase | SubName: Full=DSBA oxidoreductase; | chromosome | CDS | 2252990 | 603 | - | 0.651741 |
| NA | Rru_A1057 | 3-hydroxybutyrate dehydrogenase | SubName: Full=3-hydroxybutyrate dehydrogenase; EC=1.1.1.30; Flags: Precursor; | chromosome | CDS | 1251265 | 780 | + | 0.657692 |
| NA | Rru_A1144 | Benzoate membrane transport protein | SubName: Full=Benzoate membrane transport protein; | chromosome | CDS | 1350779 | 1227 | + | 0.654442 |
| NA | Rru_A1497 | Cyclic peptide transporter | SubName: Full=Cyclic peptide transporter; EC=3.6.3.30; Flags: Precursor; | chromosome | CDS | 1768103 | 1674 | + | 0.676225 |
| NA | Rru_A2258 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2619251 | 828 | - | 0.700483 |
| NA | Rru_A3134 | AMP-dependent synthetase and ligase | SubName: Full=AMP-dependent synthetase and ligase; EC=6.2.1.26; | chromosome | CDS | 3613334 | 1617 | + | 0.710575 |
| NA | Rru_A0056 | Toluene tolerance | SubName: Full=Toluene tolerance; Flags: Precursor; | chromosome | CDS | 61427 | 639 | + | 0.663537 |
| NA | Rru_A1912 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 2216803 | 747 | + | 0.706827 |
| NA | Rru_A0416 | 3-oxoacyl-(acyl-carrier-protein) reductase | SubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; EC=1.1.1.100; Flags: Precursor; | chromosome | CDS | 492577 | 738 | + | 0.653117 |
| NA | Rru_A2908 | Protein of unknown function DUF140 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3351889 | 828 | + | 0.642512 |
| NA | Rru_A2123 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2464986 | 795 | - | 0.657862 |
| NA | Rru_A2438 | Mammalian cell entry related | SubName: Full=Mammalian cell entry related; Flags: Precursor; | chromosome | CDS | 2835991 | 456 | - | 0.611842 |
| NA | Rru_A0912 | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml | SubName: Full=Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; | chromosome | CDS | 1086840 | 270 | + | 0.618519 |
| NA | Rru_A2439 | Mammalian cell entry related | SubName: Full=Mammalian cell entry related; Flags: Precursor; | chromosome | CDS | 2836448 | 816 | - | 0.66299 |
| NA | Rru_A0403 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 479891 | 714 | - | 0.669468 |
| NA | Rru_A2653 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3082336 | 651 | - | 0.654378 |
| NA | Rru_A1303 | Imidazolonepropionase | RecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; | chromosome | CDS | 1537507 | 1245 | + | 0.701205 |
| NA | Rru_A0998 | NifT/FixU | SubName: Full=NifT/FixU; | chromosome | CDS | 1185854 | 216 | + | 0.606481 |
| NA | Rru_A2909 | ABC transporter component | SubName: Full=ABC transporter component; EC=3.6.3.25; | chromosome | CDS | 3352722 | 834 | + | 0.654676 |
| NA | Rru_A3651 | ABC transporter component | SubName: Full=ABC transporter component; EC=3.6.3.25; | chromosome | CDS | 4189816 | 714 | + | 0.680672 |
| NA | Rru_A0427 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; Flags: Precursor; | chromosome | CDS | 499592 | 771 | - | 0.723735 |
| NA | Rru_A1846 | Twin-arginine translocation pathway signal | SubName: Full=Twin-arginine translocation pathway signal; Flags: Precursor; | chromosome | CDS | 2144459 | 1095 | + | 0.660274 |
| NA | Rru_A1969 | Esterase, PHB depolymerase | SubName: Full=Esterase, PHB depolymerase; EC=3.1.1.73; | chromosome | CDS | 2276369 | 1122 | + | 0.720143 |
| NA | Rru_A3653 | Protein of unknown function DUF214 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4191254 | 2544 | + | 0.710692 |
| NA | Rru_A0336 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 407932 | 843 | + | 0.609727 |
| NA | Rru_A2093 | Methyltransferase FkbM | SubName: Full=Methyltransferase FkbM; | chromosome | CDS | 2420215 | 759 | + | 0.533597 |
| NA | Rru_A0425 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 498478 | 351 | - | 0.669516 |
| NA | Rru_A3017 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 3474442 | 792 | + | 0.674242 |
| NA | Rru_A2775 | Dienelactone hydrolase | SubName: Full=Dienelactone hydrolase; EC=3.1.1.45; Flags: Precursor; | chromosome | CDS | 3210020 | 810 | - | 0.687654 |
| NA | Rru_A2910 | Mammalian cell entry related | SubName: Full=Mammalian cell entry related; Flags: Precursor; | chromosome | CDS | 3353608 | 954 | + | 0.654088 |
| NA | Rru_A3002 | Nicotinamidase | SubName: Full=Nicotinamidase; EC=3.5.1.19; | chromosome | CDS | 3459252 | 606 | + | 0.671617 |
| NA | Rru_A0417 | Acyl carrier protein (ACP) | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 493509 | 234 | + | 0.542735 |
| NA | Rru_A3667 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 4213824 | 855 | + | 0.660819 |
| NA | Rru_A0908 | microcompartments protein | SubName: Full=Microcompartments protein; | chromosome | CDS | 1083996 | 279 | + | 0.641577 |
| NA | Rru_A2616 | Histone deacetylase superfamily | SubName: Full=Histone deacetylase superfamily; | chromosome | CDS | 3044654 | 930 | + | 0.645161 |
| NA | Rru_A2445 | Protein of unknown function DUF140 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2844353 | 1170 | + | 0.684615 |
| NA | Rru_A0418 | Beta-ketoacyl synthase | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 493901 | 1263 | + | 0.646873 |
| NA | Rru_A1176 | Histone deacetylase superfamily | SubName: Full=Histone deacetylase superfamily; | chromosome | CDS | 1391734 | 1029 | + | 0.690962 |
| NA | Rru_A2747 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 3180062 | 762 | - | 0.721785 |
| NA | Rru_A1528 | Toluene tolerance | SubName: Full=Toluene tolerance; Flags: Precursor; | chromosome | CDS | 1798735 | 642 | - | 0.630841 |
| NA | Rru_A3227 | conserved hypothetical protein, potential methyltransferase | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3721137 | 765 | - | 0.613072 |
| NA | Rru_A2861 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3295122 | 579 | + | 0.633851 |
| NA | Rru_A3267 | Methionine biosynthesis MetW | SubName: Full=Methionine biosynthesis MetW; Flags: Precursor; | chromosome | CDS | 3766410 | 636 | + | 0.666667 |
| NA | Rru_A0757 | Isochorismatase hydrolase | SubName: Full=Isochorismatase hydrolase; | chromosome | CDS | 889755 | 567 | + | 0.670194 |
| NA | Rru_A3269 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3767646 | 795 | - | 0.677987 |
| NA | Rru_A1945 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.184; | chromosome | CDS | 2253749 | 684 | - | 0.673977 |
| NA | Rru_A0193 | Beta-ketoacyl synthase | SubName: Full=Beta-ketoacyl synthase; EC=2.3.1.41; | chromosome | CDS | 235912 | 1224 | - | 0.698529 |
| NA | Rru_A1658 | AMP-dependent synthetase and ligase | SubName: Full=AMP-dependent synthetase and ligase; EC=6.2.1.26; | chromosome | CDS | 1948973 | 1629 | + | 0.624309 |
| NA | Rru_A3697 | Fumarylacetoacetate (FAA) hydrolase | SubName: Full=Fumarylacetoacetate (FAA) hydrolase; EC=5.3.3.10; | chromosome | CDS | 4243568 | 702 | - | 0.692308 |
| NA | Rru_A0493 | Phytoene desaturase | SubName: Full=Phytoene desaturase; | chromosome | CDS | 578808 | 1524 | + | 0.637139 |
| NA | Rru_A3412 | Amidohydrolase | SubName: Full=Amidohydrolase; | chromosome | CDS | 3928377 | 1230 | - | 0.677236 |
| NA | Rru_A2717 | Isochorismatase hydrolase | SubName: Full=Isochorismatase hydrolase; EC=3.3.2.1; | chromosome | CDS | 3140758 | 570 | - | 0.664912 |
| NA | Rru_A0932 | Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains | SubName: Full=Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains; | chromosome | CDS | 1109040 | 1962 | + | 0.701835 |
| NA | Rru_A1316 | AMP-dependent synthetase and ligase | SubName: Full=AMP-dependent synthetase and ligase; EC=6.2.1.26; | chromosome | CDS | 1552600 | 1641 | + | 0.675807 |
| NA | Rru_A0407 | ABC transporter component | SubName: Full=ABC transporter component; EC=3.6.3.25; | chromosome | CDS | 484440 | 774 | - | 0.643411 |
| NA | Rru_A2984 | CrtD protein | SubName: Full=CrtD protein; Flags: Precursor; | chromosome | CDS | 3435940 | 1512 | + | 0.710979 |
| NA | Rru_A1264 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 1485291 | 783 | - | 0.667944 |
| NA | Rru_A0905 | microcompartments protein | SubName: Full=Microcompartments protein; | chromosome | CDS | 1082129 | 297 | + | 0.643098 |
| NA | Rru_A2639 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3068646 | 957 | - | 0.571578 |
| NA | Rru_A3396 | Autoinducer synthesis protein | RecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; | chromosome | CDS | 3913528 | 621 | + | 0.624799 |
| NA | Rru_A2218 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 2576756 | 807 | + | 0.695167 |
| NA | Rru_A1507 | short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.35; | chromosome | CDS | 1780803 | 768 | - | 0.708333 |
| NA | Rru_A2745 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3177571 | 1137 | - | 0.657872 |
| NA | Rru_A0909 | Propanediol utilization protein | RecName: Full=Phosphate propanoyltransferase; EC=2.3.1.222; | chromosome | CDS | 1084367 | 729 | + | 0.655693 |
| NA | Rru_A1326 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1564629 | 1101 | + | 0.647593 |
| NA | Rru_A2446 | ABC transporter component | SubName: Full=ABC transporter component; EC=3.6.3.25; Flags: Precursor; | chromosome | CDS | 2845525 | 795 | + | 0.656604 |
| NA | Rru_A0648 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 770155 | 639 | - | 0.647887 |
| NA | Rru_A2512 | 3-oxoacyl-(acyl-carrier-protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; EC=1.1.1.100; | chromosome | CDS | 2920328 | 729 | - | 0.640604 |
| NA | Rru_A3719 | Methyltransferase FkbM | SubName: Full=Methyltransferase FkbM; | chromosome | CDS | 4269548 | 867 | + | 0.657439 |
| NA | Rru_A3432 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3950093 | 1524 | - | 0.716535 |
| NA | Rru_A1626 | methyltransferase | SubName: Full=Methyltransferase; | chromosome | CDS | 1918564 | 609 | + | 0.65353 |
| NA | Rru_A1457 | O-methyltransferase, family 2 | SubName: Full=O-methyltransferase, family 2; | chromosome | CDS | 1720380 | 1014 | - | 0.698225 |
| NA | Rru_A0408 | Protein of unknown function DUF140 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 485210 | 774 | - | 0.622739 |
| NA | Rru_A2517 | AMP-dependent synthetase and ligase | SubName: Full=AMP-dependent synthetase and ligase; EC=6.2.1.26; | chromosome | CDS | 2927279 | 1380 | - | 0.707971 |
| NA | Rru_A2610 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3034864 | 3942 | + | 0.643582 |
| NA | Rru_A1306 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 1540777 | 834 | - | 0.679856 |
| NA | Rru_A3011 | Isochorismatase hydrolase | SubName: Full=Isochorismatase hydrolase; | chromosome | CDS | 3468426 | 708 | + | 0.65113 |
| NA | Rru_A1312 | AMP-dependent synthetase and ligase | SubName: Full=AMP-dependent synthetase and ligase; EC=6.2.1.3; | chromosome | CDS | 1548113 | 1695 | - | 0.646018 |
| NA | Rru_A1922 | DSBA oxidoreductase | SubName: Full=DSBA oxidoreductase; | chromosome | CDS | 2226552 | 657 | - | 0.675799 |
| NA | Rru_A2143 | methyltransferase | SubName: Full=Methyltransferase; | chromosome | CDS | 2487755 | 747 | - | 0.661312 |
| NA | Rru_A2982 | O-methyltransferase, family 2 | SubName: Full=Hydroxyneurosporene-O-methyltransferase; EC=2.1.1.-; | chromosome | CDS | 3433496 | 1191 | - | 0.679261 |
| NA | Rru_A3122 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3602103 | 285 | + | 0.652632 |
| NA | Rru_A1721 | Isochorismatase hydrolase | SubName: Full=Isochorismatase hydrolase; | chromosome | CDS | 2014297 | 558 | + | 0.668459 |
| NA | Rru_A0729 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 856840 | 780 | - | 0.675641 |
| NA | Rru_A2120 | Acyl transferase region | SubName: Full=Acyl transferase region; EC=2.3.1.94; | chromosome | CDS | 2461858 | 1053 | + | 0.682811 |
| NA | Rru_A0339 | Short-chain dehydrogenase/reductase SDR | SubName: Full=Short-chain dehydrogenase/reductase SDR; EC=1.1.1.100; | chromosome | CDS | 409696 | 792 | + | 0.695707 |
| NA | Rru_A2736 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3163850 | 2607 | + | 0.686613 |
| NA | Rru_A0736 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 862293 | 927 | - | 0.70658 |
| NA | Rru_A0273 | Acetoacetyl-CoA reductase | SubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; EC=1.1.1.100; | chromosome | CDS | 337391 | 729 | - | 0.622771 |
| NA | Rru_A3652 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4190526 | 732 | + | 0.729508 |
| NA | Rru_A3109 | Aspartate racemase | SubName: Full=Aspartate racemase; EC=5.1.1.13; | chromosome | CDS | 3579694 | 5946 | + | 0.704844 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|