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2024-04-28 10:45:34

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Rhodospirillum rubrum ATCC 11170, ATCC 11170

Number of genes found: 98

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodospirillum rubrum ATCC 11170, ATCC 11170
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rru_A2861 hypothetical proteinchromosome CDS3295122 579 + 0.633851
NA Rru_A2350 Methylase involved in ubiquinone/menaquinone biosynthesis-likechromosome CDS2728599 966 - 0.650104
NA Rru_A2910 Mammalian cell entry relatedchromosome CDS3353608 954 + 0.654088
NA Rru_A3017 Short-chain dehydrogenase/reductase SDRchromosome CDS3474442 792 + 0.674242
NA Rru_A2126 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas echromosome CDS2468818 843 - 0.65599
NA Rru_A2143 methyltransferasechromosome CDS2487755 747 - 0.661312
NA Rru_A3412 Amidohydrolasechromosome CDS3928377 1230 - 0.677236
NA Rru_A3011 Isochorismatase hydrolasechromosome CDS3468426 708 + 0.65113
NA Rru_A2439 Mammalian cell entry relatedchromosome CDS2836448 816 - 0.66299
NA Rru_A1944 DSBA oxidoreductasechromosome CDS2252990 603 - 0.651741
NA Rru_A0998 NifT/FixUchromosome CDS1185854 216 + 0.606481
NA Rru_A2445 Protein of unknown function DUF140chromosome CDS2844353 1170 + 0.684615
NA Rru_A2717 Isochorismatase hydrolasechromosome CDS3140758 570 - 0.664912
NA Rru_A3667 Short-chain dehydrogenase/reductase SDRchromosome CDS4213824 855 + 0.660819
NA Rru_A0908 microcompartments proteinchromosome CDS1083996 279 + 0.641577
NA Rru_A0757 Isochorismatase hydrolasechromosome CDS889755 567 + 0.670194
NA Rru_A3267 Methionine biosynthesis MetWchromosome CDS3766410 636 + 0.666667
NA Rru_A1457 O-methyltransferase, family 2chromosome CDS1720380 1014 - 0.698225
NA Rru_A3697 Fumarylacetoacetate (FAA) hydrolasechromosome CDS4243568 702 - 0.692308
NA Rru_A2120 Acyl transferase regionchromosome CDS2461858 1053 + 0.682811
NA Rru_A3719 Methyltransferase FkbMchromosome CDS4269548 867 + 0.657439
NA Rru_A0736 conserved hypothetical proteinchromosome CDS862293 927 - 0.70658
NA Rru_A2123 hypothetical proteinchromosome CDS2464986 795 - 0.657862
NA Rru_A0934 hypothetical proteinchromosome CDS1112304 1722 + 0.606272
NA Rru_A0416 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS492577 738 + 0.653117
NA Rru_A1969 Esterase, PHB depolymerasechromosome CDS2276369 1122 + 0.720143
NA Rru_A3269 conserved hypothetical proteinchromosome CDS3767646 795 - 0.677987
NA Rru_A2610 hypothetical proteinchromosome CDS3034864 3942 + 0.643582
NA Rru_A0403 Short-chain dehydrogenase/reductase SDRchromosome CDS479891 714 - 0.669468
NA Rru_A0427 Short-chain dehydrogenase/reductase SDRchromosome CDS499592 771 - 0.723735
NA Rru_A3396 Autoinducer synthesis proteinchromosome CDS3913528 621 + 0.624799
NA Rru_A2616 Histone deacetylase superfamilychromosome CDS3044654 930 + 0.645161
NA Rru_A2984 CrtD proteinchromosome CDS3435940 1512 + 0.710979
NA Rru_A0932 Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domainschromosome CDS1109040 1962 + 0.701835
NA Rru_A1497 Cyclic peptide transporterchromosome CDS1768103 1674 + 0.676225
NA Rru_A0493 Phytoene desaturasechromosome CDS578808 1524 + 0.637139
NA Rru_A2909 ABC transporter componentchromosome CDS3352722 834 + 0.654676
NA Rru_A3002 Nicotinamidasechromosome CDS3459252 606 + 0.671617
NA Rru_A1144 Benzoate membrane transport proteinchromosome CDS1350779 1227 + 0.654442
NA Rru_A1176 Histone deacetylase superfamilychromosome CDS1391734 1029 + 0.690962
NA Rru_A0273 Acetoacetyl-CoA reductasechromosome CDS337391 729 - 0.622771
NA Rru_A2512 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS2920328 729 - 0.640604
NA Rru_A0056 Toluene tolerancechromosome CDS61427 639 + 0.663537
NA Rru_A3227 conserved hypothetical protein, potential methyltransferasechromosome CDS3721137 765 - 0.613072
NA Rru_A0339 Short-chain dehydrogenase/reductase SDRchromosome CDS409696 792 + 0.695707
NA Rru_A1312 AMP-dependent synthetase and ligasechromosome CDS1548113 1695 - 0.646018
NA Rru_A1316 AMP-dependent synthetase and ligasechromosome CDS1552600 1641 + 0.675807
NA Rru_A3122 hypothetical proteinchromosome CDS3602103 285 + 0.652632
NA Rru_A0407 ABC transporter componentchromosome CDS484440 774 - 0.643411
NA Rru_A3432 hypothetical proteinchromosome CDS3950093 1524 - 0.716535
NA Rru_A1846 Twin-arginine translocation pathway signalchromosome CDS2144459 1095 + 0.660274
NA Rru_A1528 Toluene tolerancechromosome CDS1798735 642 - 0.630841
NA Rru_A2745 conserved hypothetical proteinchromosome CDS3177571 1137 - 0.657872
NA Rru_A1658 AMP-dependent synthetase and ligasechromosome CDS1948973 1629 + 0.624309
NA Rru_A3651 ABC transporter componentchromosome CDS4189816 714 + 0.680672
NA Rru_A2093 Methyltransferase FkbMchromosome CDS2420215 759 + 0.533597
NA Rru_A3134 AMP-dependent synthetase and ligasechromosome CDS3613334 1617 + 0.710575
NA Rru_A0408 Protein of unknown function DUF140chromosome CDS485210 774 - 0.622739
NA Rru_A0909 Propanediol utilization proteinchromosome CDS1084367 729 + 0.655693
NA Rru_A2438 Mammalian cell entry relatedchromosome CDS2835991 456 - 0.611842
NA Rru_A2446 ABC transporter componentchromosome CDS2845525 795 + 0.656604
NA Rru_A1912 Short-chain dehydrogenase/reductase SDRchromosome CDS2216803 747 + 0.706827
NA Rru_A0729 Short-chain dehydrogenase/reductase SDRchromosome CDS856840 780 - 0.675641
NA Rru_A2908 Protein of unknown function DUF140chromosome CDS3351889 828 + 0.642512
NA Rru_A2775 Dienelactone hydrolasechromosome CDS3210020 810 - 0.687654
NA Rru_A1264 Short-chain dehydrogenase/reductase SDRchromosome CDS1485291 783 - 0.667944
NA Rru_A3231 ThiJ/PfpIchromosome CDS3725576 684 - 0.666667
NA Rru_A0194 hypothetical proteinchromosome CDS237356 288 + 0.583333
NA Rru_A3652 conserved hypothetical proteinchromosome CDS4190526 732 + 0.729508
NA Rru_A0648 conserved hypothetical proteinchromosome CDS770155 639 - 0.647887
NA Rru_A2747 Short-chain dehydrogenase/reductase SDRchromosome CDS3180062 762 - 0.721785
NA Rru_A2653 hypothetical proteinchromosome CDS3082336 651 - 0.654378
NA Rru_A0045 Beta-ketoacyl synthasechromosome CDS46946 1215 + 0.647737
NA Rru_A1922 DSBA oxidoreductasechromosome CDS2226552 657 - 0.675799
NA Rru_A0905 microcompartments proteinchromosome CDS1082129 297 + 0.643098
NA Rru_A2258 hypothetical proteinchromosome CDS2619251 828 - 0.700483
NA Rru_A1626 methyltransferasechromosome CDS1918564 609 + 0.65353
NA Rru_A1306 Short-chain dehydrogenase/reductase SDRchromosome CDS1540777 834 - 0.679856
NA Rru_A3653 Protein of unknown function DUF214chromosome CDS4191254 2544 + 0.710692
NA Rru_A0417 Acyl carrier protein (ACP)chromosome CDS493509 234 + 0.542735
NA Rru_A1507 short-chain dehydrogenase/reductase SDRchromosome CDS1780803 768 - 0.708333
NA Rru_A2736 hypothetical proteinchromosome CDS3163850 2607 + 0.686613
NA Rru_A2639 hypothetical proteinchromosome CDS3068646 957 - 0.571578
NA Rru_A1326 hypothetical proteinchromosome CDS1564629 1101 + 0.647593
NA Rru_A2517 AMP-dependent synthetase and ligasechromosome CDS2927279 1380 - 0.707971
NA Rru_A1945 Short-chain dehydrogenase/reductase SDRchromosome CDS2253749 684 - 0.673977
NA Rru_A0336 conserved hypothetical proteinchromosome CDS407932 843 + 0.609727
NA Rru_A3109 Aspartate racemasechromosome CDS3579694 5946 + 0.704844
NA Rru_A0425 hypothetical proteinchromosome CDS498478 351 - 0.669516
NA Rru_A1721 Isochorismatase hydrolasechromosome CDS2014297 558 + 0.668459
NA Rru_A0418 Beta-ketoacyl synthasechromosome CDS493901 1263 + 0.646873
NA Rru_A2218 Short-chain dehydrogenase/reductase SDRchromosome CDS2576756 807 + 0.695167
NA Rru_A1303 Imidazolonepropionasechromosome CDS1537507 1245 + 0.701205
NA Rru_A1057 3-hydroxybutyrate dehydrogenasechromosome CDS1251265 780 + 0.657692
NA Rru_A2982 O-methyltransferase, family 2chromosome CDS3433496 1191 - 0.679261
NA Rru_A0912 Ethanolamine utilization protein EutN/carboxysome structural protein Ccmlchromosome CDS1086840 270 + 0.618519
NA Rru_A0193 Beta-ketoacyl synthasechromosome CDS235912 1224 - 0.698529
NA Rru_A2553 Methylase involved in ubiquinone/menaquinone biosynthesis-likechromosome CDS2968578 690 + 0.710145