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2024-04-29 00:18:06

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Salinibacter ruber DSM 13855, DSM 13855; M31

Number of genes found: 77

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Salinibacter ruber DSM 13855, DSM 13855; M31
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SRU_1214 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1530365 855 + 0.690058
NA SRU_1525 Putative rRNA methylase superfamilychromosome CDS1896350 579 - 0.701209
NA SRU_0113 putative hydantoinase/oxoprolinasechromosome CDS144543 1620 - 0.730864
NA SRU_0344 ABC transporter, permeasechromosome CDS461905 1116 - 0.698029
NA SRU_2750 putative periplasmic efflux proteinchromosome CDS3405279 519 - 0.645472
NA SRU_2440 daunorubicin C-13 ketoreductasechromosome CDS3048171 933 - 0.729904
NA SRU_2374 phytoene dehydrogenase, putativechromosome CDS2951933 1446 - 0.754495
NA SRU_0947 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1214066 804 + 0.69403
NA SRU_2227 conserved hypothetical proteinchromosome CDS2761234 777 + 0.662806
NA SRU_1350 putative isochorismate synthasechromosome CDS1696917 1539 + 0.725146
NA SRU_1395 chalcone synthase, putativechromosome CDS1745649 1182 + 0.672589
NA SRU_1592 menaquinone biosynthesis methyltransferase ubiEchromosome CDS1978218 762 - 0.678478
NA SRU_1703 Dienelactone hydrolase familychromosome CDS2111842 1014 - 0.720907
NA SRU_2681 NAD dependent epimerase/dehydratase familychromosome CDS3318427 765 + 0.709804
NA SRU_2653 3-beta hydroxysteroid dehydrogenase/isomerase familychromosome CDS3289527 1281 - 0.678376
NA SRU_1911 putative amidohydrolasechromosome CDS2358428 1344 + 0.693452
NA SRU_0832 conserved hypothetical proteinchromosome CDS1053418 654 + 0.671254
NA SRU_2503 mce related proteinchromosome CDS3109019 819 + 0.680098
NA SRU_1464 hypothetical proteinchromosome CDS1825681 1461 - 0.61191
NA SRU_0006 retinol dehydrogenase 11chromosome CDS6116 894 - 0.667785
NA SRU_0343 ABC transporter, ATP-binding proteinchromosome CDS460942 768 - 0.66276
NA SRU_1933 Peptidase family T4chromosome CDS2391001 1224 - 0.726307
NA SRU_0696 putative permease domain proteinchromosome CDS904509 2547 - 0.698469
NA SRU_2795 putative oxidoreductasechromosome CDS3453909 699 + 0.728183
NA SRU_0879 extracellular solute-binding protein, family 7chromosome CDS1122233 1137 - 0.669305
NA SRU_1178 methyltransferase, putativechromosome CDS1487458 654 + 0.686544
NA SRU_1129 Amidohydrolase family proteinchromosome CDS1422086 1290 + 0.704651
NA SRU_0114 conserved hypothetical proteinchromosome CDS147041 2790 + 0.673477
NA SRU_0990 TRAP transporter, DctQ-like membrane proteinchromosome CDS1264603 564 + 0.66844
NA SRU_0880 NAD-binding domain 4, putativechromosome CDS1123566 726 - 0.688705
NA SRU_1869 hypothetical proteinchromosome CDS2312703 525 - 0.664762
NA SRU_2037 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2521074 759 + 0.704875
NA SRU_1292 conserved hypothetical proteinchromosome CDS1629846 666 + 0.716216
NA SRU_0743 phytoene dehydrogenase and related proteinschromosome CDS954849 1476 - 0.681572
NA SRU_1128 Amidohydrolase family, putativechromosome CDS1420801 1293 + 0.682135
NA SRU_2309 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2876421 627 - 0.684211
NA SRU_0780 conserved hypothetical proteinchromosome CDS991910 612 + 0.707516
NA SRU_1881 methyltransferase, putativechromosome CDS2322682 744 + 0.701613
NA SRU_2740 thioesterase family proteinchromosome CDS3389563 411 + 0.708029
NA SRU_2506 Uncharacterized protein family (UPF0089)chromosome CDS3111158 1410 + 0.706383
NA SRU_1910 putative amidohydrolasechromosome CDS2356951 1428 + 0.685574
NA SRU_2282 20-beta-hydroxysteroid dehydrogenasechromosome CDS2837609 705 - 0.689362
NA SRU_2461 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS3068233 813 - 0.696187
NA SRU_1983 predicted SAM-dependent methyltransferasechromosome CDS2452096 630 - 0.728571
NA SRU_1079 hypothetical proteinchromosome CDS1349658 468 + 0.694444
NA SRU_1020 Putative RNA methylase family UPF0020chromosome CDS1299662 471 - 0.666667
NA SRU_2332 probable phosphatidylethanolamine N-methyltransferasechromosome CDS2906791 672 - 0.691964
NA SRU_0177 5-oxoprolinasechromosome CDS246627 2103 - 0.740846
NA SRU_1307 integral membrane proteinchromosome CDS1646977 1089 - 0.665748
NA SRU_2067 histone deacetylase/AcuC/AphA family proteinchromosome CDS2562003 924 + 0.678571
NA SRU_1181 conserved hypothetical proteinchromosome CDS1490437 672 - 0.68006
NA SRU_0993 hypothetical proteinchromosome CDS1269068 843 + 0.632266
NA SRU_2345 acetoin utilization protein acuCchromosome CDS2918854 1137 - 0.690413
NA SRU_2365 putative long-chain-fatty-acid-CoA ligasechromosome CDS2941881 1533 - 0.72407
NA SRU_1909 Amidohydrolase family proteinchromosome CDS2355029 1845 + 0.697019
NA SRU_0721 oxidoreductase, FAD-bindingchromosome CDS931852 1254 - 0.721691
NA SRU_2814 Amidohydrolase family proteinchromosome CDS3473599 1725 - 0.695652
NA SRU_1421 possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerasechromosome CDS1776285 663 + 0.674208
NA SRU_2502 ABC transporter, ATP-binding proteinchromosome CDS3108077 771 + 0.647211
NA SRU_1313 predicted SAM-dependent methyltransferase, putativechromosome CDS1652800 639 + 0.70266
NA SRU_0127 15,15' beta carotene dioxygenasechromosome CDS167269 1563 + 0.705694
NA SRU_2448 Amidohydrolase familychromosome CDS3059074 1455 - 0.714089
NA SRU_0736 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS947999 774 + 0.664083
NA SRU_0991 TRAP transporter, DctM subunit subfamilychromosome CDS1265353 1347 + 0.674833
NA SRU_0996 conserved hypothetical proteinchromosome CDS1271668 894 - 0.657718
NA SRU_2501 domain of unknown function superfamilychromosome CDS3107258 753 + 0.661355
NA SRU_2734 conserved hypothetical proteinchromosome CDS3380410 489 + 0.689162
acpP SRU_2754 acyl carrier proteinchromosome CDS3409376 237 - 0.590717
crtI SRU_2060 phytoene dehydrogenasechromosome CDS2549320 1611 - 0.680323
crtO SRU_1502 beta-carotene ketolasechromosome CDS1869548 1533 - 0.624918
fabF SRU_2739 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS3388051 1425 + 0.699649
fabF SRU_2753 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS3407980 1260 - 0.690476
fabG SRU_1153 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS1450788 822 + 0.690998
fabG SRU_0045 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS41017 750 + 0.677333
fahA SRU_2360 fumarylacetoacetasechromosome CDS2935646 1290 - 0.693023
menE SRU_1355 O-succinylbenzoate-CoA ligasechromosome CDS1703485 1428 + 0.717087
pncA SRU_1457 pyrazinamidase/nicotinamidasechromosome CDS1814673 627 + 0.676236