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2024-05-06 14:31:56

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Rhizobium etli CFN 42, CFN 42

Number of genes found: 129

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_CH00051 probable cytochrome p450 proteinchromosome CDS51444 1413 + 0.605803
NA RHE_CH02349 probable ABC transporter, permease proteinchromosome CDS2454096 1170 - 0.602564
NA RHE_CH02867 probable SAM-dependent methyltransferase proteinchromosome CDS2996122 675 + 0.608889
NA RHE_CH01018 probable oxidoreducatse proteinchromosome CDS1067858 942 - 0.683652
NA RHE_CH02701 probable fumarylpyruvate hydrolase proteinchromosome CDS2814898 696 + 0.656609
NA RHE_CH02679 putative methyltransferase proteinchromosome CDS2791857 684 + 0.603801
NA RHE_PF00559 putative short chain dehydrogenase proteinp42f CDS625079 723 - 0.640387
NA RHE_PF00540 probable oxidoreductase proteinp42f CDS605968 726 + 0.588154
NA RHE_CH01047 probable 3-oxoacyl-[acyl-carrier protein] reductase proteinchromosome CDS1099628 672 + 0.665179
NA RHE_CH02450 probable short-chain dehydrogenase proteinchromosome CDS2559718 738 - 0.639566
NA RHE_CH02098 putative dithiol-disulfide isomerase protein (involved in polyketide biosynthesis)chromosome CDS2196504 672 - 0.614583
NA RHE_CH03811 putative SAM-dependent methyltransferase proteinchromosome CDS4036478 666 - 0.659159
NA RHE_CH01048 probable 3-oxoacyl-[acyl-carrier protein] reductase proteinchromosome CDS1100702 792 - 0.616162
NA RHE_CH03939 putative ABC transporter, permease protein (involved in lysophospholipase L1 biosynthesis)chromosome CDS4166411 2538 + 0.653664
NA RHE_CH03722 probable transcriptional regulator proteinchromosome CDS3945009 960 + 0.66875
NA RHE_CH02475 probable 3-oxoacyl-(acyl-carrier-protein) synthase II proteinchromosome CDS2586730 1287 - 0.655789
NA RHE_CH02403 probable short chain dehydrogenase proteinchromosome CDS2514227 783 + 0.615581
NA RHE_CH02733 probable SAM-dependent methyltransferase proteinchromosome CDS2846061 588 + 0.627551
NA RHE_CH01777 probable oxidoreductase proteinchromosome CDS1862896 825 + 0.603636
NA RHE_CH03007 probable short-chain dehydrogenase proteinchromosome CDS3148936 873 - 0.632302
NA RHE_CH02519 putative copper-containing oxidase proteinchromosome CDS2630609 1272 + 0.617925
NA RHE_CH02466 hypothetical conserved proteinchromosome CDS2579053 618 - 0.66343
NA RHE_CH04097 putative ABC transporter, ATP-binding proteinchromosome CDS4340887 693 - 0.65368
NA RHE_CH01585 probable cytochrome P450 hydroxylase proteinchromosome CDS1666011 1245 - 0.627309
NA RHE_CH03702 hypothetical conserved proteinchromosome CDS3921344 1185 + 0.613502
NA RHE_CH01089 putative hydrolase proteinchromosome CDS1138655 900 - 0.594444
NA RHE_CH00723 probable metallopeptidase proteinchromosome CDS753388 990 + 0.560606
NA RHE_CH02476 probable 3-oxoacyl-(acyl-acp) synthase II proteinchromosome CDS2588027 1206 - 0.643449
NA RHE_CH02612 hypothetical conserved proteinchromosome CDS2726324 582 - 0.632302
NA RHE_CH01762 probable oxidoreductase proteinchromosome CDS1849092 777 - 0.643501
NA RHE_CH00591 probable arylamine N-acetyltransferase proteinchromosome CDS611127 792 - 0.646465
NA RHE_CH01142 hypothetical conserved proteinchromosome CDS1194455 780 + 0.59359
NA RHE_CH01711 probable dehydrogenase proteinchromosome CDS1792860 852 - 0.629108
NA RHE_PF00312 probable isochorismatase proteinp42f CDS350911 567 + 0.638448
NA RHE_CH03068 probable benzoate transporter proteinchromosome CDS3209422 1230 - 0.647967
NA RHE_CH03395 probable multicopper oxidase proteinchromosome CDS3570443 327 + 0.626911
NA RHE_CH00908 probable oxidoreductase proteinchromosome CDS956341 819 - 0.632479
NA RHE_CH01264 probable oxidoreductase proteinchromosome CDS1315799 903 + 0.663344
NA RHE_CH01427 probable oxidoreductase proteinchromosome CDS1498132 741 - 0.663968
NA RHE_CH02552 probable SAM-dependent methyltransferase proteinchromosome CDS2663225 801 - 0.640449
NA RHE_CH01201 putative ubiquinone/menaquinone biosynthesis methyltransferase proteinchromosome CDS1254551 654 - 0.648318
NA RHE_CH02347 putative ABC transporter proteinchromosome CDS2451870 1371 - 0.592998
NA RHE_CH03134 putative hydrolase proteinchromosome CDS3284336 1785 - 0.628571
NA RHE_CH02402 probable short chain dehydrogenase proteinchromosome CDS2513209 789 + 0.6109
NA RHE_CH02325 hypothetical conserved proteinchromosome CDS2425026 927 + 0.636462
NA RHE_CH03862 putative oxidoreductase proteinchromosome CDS4092914 825 - 0.610909
NA RHE_CH03925 probable oxidoreductase proteinchromosome CDS4155593 873 + 0.616266
NA RHE_CH02737 putative SAM-dependent methyltransferase proteinchromosome CDS2849752 744 + 0.547043
NA RHE_CH03352 probable 3-oxoacyl-[acyl-carrier-protein] reductase proteinchromosome CDS3520554 744 - 0.643817
NA RHE_CH02341 probable isochorismatase proteinchromosome CDS2447075 561 + 0.631016
NA RHE_CH02404 probable short-chain dehydrogenase proteinchromosome CDS2515313 768 - 0.661458
NA RHE_CH03884 putative oxidoreductase proteinchromosome CDS4115762 753 - 0.649402
NA RHE_CH02634 putative RTX toxin hemolysin-type proteinchromosome CDS2746909 1617 - 0.645022
NA RHE_CH00222 putative peptidase proteinchromosome CDS234753 1038 - 0.668593
NA RHE_CH00343 probable oxidoreductase proteinchromosome CDS353753 765 - 0.647059
NA RHE_CH02298 probable catechol 1,2-dioxygenase proteinchromosome CDS2396560 894 + 0.599553
NA RHE_PF00198 hypothetical conserved proteinp42f CDS207840 1803 - 0.611758
NA RHE_CH03691 probable oxidoreductase proteinchromosome CDS3910208 780 - 0.626923
NA RHE_CH02604 probable ring-cleaving dioxygenase proteinchromosome CDS2715709 606 + 0.620462
NA RHE_CH01372 hypothetical conserved proteinchromosome CDS1436648 5130 + 0.624951
NA RHE_CH01063 putative SAM-dependent methyltransferase proteinchromosome CDS1113786 627 + 0.658692
NA RHE_PF00466 probable dehydrogenase proteinp42f CDS525920 750 - 0.62
NA RHE_PF00013 putative long-chain-fatty-acid--CoA ligase proteinp42f CDS12135 1518 + 0.639657
NA RHE_CH02598 hypothetical conserved proteinchromosome CDS2707192 1020 + 0.62549
NA RHE_CH02692 probable oxidoreductase proteinchromosome CDS2803413 726 + 0.595041
NA RHE_CH02037 probable short-chain dehydrogenase proteinchromosome CDS2129937 804 - 0.585821
NA RHE_CH03938 putative ABC transporter, ATP-binding protein (involved in lysophospholipase L1 biosynthesis)chromosome CDS4165701 708 + 0.629943
NA RHE_CH01480 putative oxidoreductase proteinchromosome CDS1551495 768 - 0.622396
NA RHE_PF00183 putative arylmalonate decarboxylase proteinp42f CDS193954 780 - 0.658974
NA RHE_CH00917 probable deacetylase proteinchromosome CDS966444 936 - 0.635684
NA RHE_CH03764 probable SAM-dependent methyltransferase proteinchromosome CDS3990584 885 + 0.632768
NA RHE_CH02299 putative 2-oxo-hepta-3-ene-1,7-dioate hydratase proteinchromosome CDS2397475 783 + 0.590038
NA RHE_CH03788 putative oxidoreductase proteinchromosome CDS4014380 834 + 0.61271
NA RHE_PF00053 hypothetical conserved proteinp42f CDS55331 1326 + 0.600302
NA RHE_CH03618 putative TRAP mannitol/C4-dicarboxylate transporter, permease proteinchromosome CDS3828102 1464 + 0.633197
NA RHE_PF00008 probable oxidoreductase proteinp42f CDS8493 660 - 0.656061
NA RHE_CH00797 probable dehydrogenase proteinchromosome CDS835810 756 + 0.60582
NA RHE_CH01747 probable aromatic amino acid degradation protein, fumarylacetoacetate hydrolase familychromosome CDS1830148 1026 + 0.641326
NA RHE_CH01496 probable metallo-oxidoreductase proteinchromosome CDS1570736 1392 - 0.640805
NA RHE_CH00289 probable short-chain dehydrogenase proteinchromosome CDS297509 843 - 0.661922
NA RHE_CH00767 hypothetical proteinchromosome CDS806151 783 + 0.535121
NA RHE_CH04043 hypothetical conserved proteinchromosome CDS4281761 252 + 0.571429
NA RHE_PF00142 probable NAD/NADP dependent oxidoreductase proteinp42f CDS149928 750 - 0.592
NA RHE_CH00772 putative methyltransferase proteinchromosome CDS811300 963 + 0.53271
NA RHE_CH03699 putative 3-oxoacyl-[acyl-carrier protein] reductase proteinchromosome CDS3918146 780 + 0.634615
NA RHE_CH03703 putative oxidoreductase proteinchromosome CDS3922731 822 + 0.639903
NA RHE_CH02348 probable ABC transporter, ATP-binding proteinchromosome CDS2453249 846 - 0.621749
NA RHE_CH03619 probable TRAP mannitol/C4-dicarboxylate transporter, substrate-binding proteinchromosome CDS3829653 1107 - 0.600723
NA RHE_CH03365 probable short-chain alcohol dehydrogenase proteinchromosome CDS3535807 789 - 0.618504
NA RHE_CH03617 putative TRAP mannitol/C4-dicarboxylate transporter, permease proteinchromosome CDS3827512 540 + 0.585185
NA RHE_CH03727 putative 3-oxoacyl-[acyl-carrier protein] reductase proteinchromosome CDS3949543 708 + 0.65113
NA RHE_PF00544 probable isochorismatase proteinp42f CDS608847 636 + 0.605346
NA RHE_CH02674 probable oxidoreductase proteinchromosome CDS2786397 1008 - 0.665675
NA RHE_PF00089 probable oxidoreductase proteinp42f CDS90199 774 + 0.656331
NA RHE_CH01009 probable polyhydroxybutyrate depolymerase proteinchromosome CDS1059486 933 - 0.623794
NA RHE_CH01307 probable 3-oxoacyl-[acyl-carrier-protein] reductase proteinchromosome CDS1363050 789 - 0.643853
NA RHE_CH00529 probable short-chain oxidoreductase proteinchromosome CDS548200 822 + 0.587591
NA RHE_CH00752 probable SAM-dependent methyltransferase proteinchromosome CDS788108 861 + 0.544715
NA RHE_CH00016 probable bifunctional 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylasechromosome CDS12913 843 + 0.622776
NA RHE_CH01119 probable short-chain dehydrogenase proteinchromosome CDS1168901 621 - 0.642512
NA RHE_CH01736 probable ubiquinone/menaquinone biosynthesis methyltransferase proteinchromosome CDS1820227 1035 + 0.604831
NA RHE_CH03424 putative oxidoreductase proteinchromosome CDS3602964 750 - 0.625333
NA RHE_PF00144 probable 3-oxoacyl-[acyl-carrier-protein] reductase proteinp42f CDS151711 741 - 0.634278
NA RHE_CH00744 probable chalcone synthase proteinchromosome CDS781210 1053 - 0.665717
NA RHE_CH00299 putative phenylacetic acid degradation proteinchromosome CDS306241 450 - 0.622222
acpP RHE_CH01444 acyl carrier proteinchromosome CDS1514741 237 + 0.535865
acpXL RHE_CH02478 acyl carrier proteinchromosome CDS2589829 375 - 0.514667
aphA RHE_CH00253 acetylpolyamine aminohydrolase proteinchromosome CDS265419 1026 + 0.621832
bdhA RHE_CH03123 D-beta-hydroxybutyrate dehydrogenase proteinchromosome CDS3270886 777 + 0.607465
cinI RHE_CH02916 N-acyl-L-homoserine lactone (AHL) synthase proteinchromosome CDS3050272 666 + 0.615616
fabB RHE_CH00108 3-oxoacyl-(acyl-carrier-protein) synthase I proteinchromosome CDS116460 1233 + 0.61395
fabF1 RHE_CH01445 3-oxoacyl-(acyl-carrier protein) synthase II proteinchromosome CDS1515071 1263 + 0.646873
fabF2 RHE_CH02120 3-oxoacyl-(acyl-carrier-protein) synthase II proteinchromosome CDS2219799 1266 - 0.680885
fabG1 RHE_CH00855 3-oxoacyl-(acyl carrier protein) reductase proteinchromosome CDS896592 771 - 0.639429
fabG2 RHE_CH01443 3-oxoacyl-(acyl-carrier protein) reductase proteinchromosome CDS1513717 738 + 0.639566
fadD RHE_CH00478 long-chain acyl-CoA synthetase proteinchromosome CDS492121 1701 - 0.616108
hmgA RHE_CH01746 homogentisate 1,2-dioxygenase (homogentisicase) proteinchromosome CDS1828748 1362 + 0.606461
hss RHE_CH03553 homospermidine synthase proteinchromosome CDS3741598 1452 + 0.612948
lpeA RHE_CH00769 lipolysaccharide tri-O-methyl-fucosylation protein (SAM-dependent methyltransferase protein)chromosome CDS807701 861 + 0.522648
matB RHE_CH00921 long-chain-fatty-acid-CoA ligase proteinchromosome CDS970231 1491 + 0.632461
nirK RHE_PF00525 nitrite reductase proteinp42f CDS590443 1146 + 0.598604
nlpE1 RHE_CH00768 lipopolysaccharide biosynthesis protein (SAM-dependent methyltransferase protein)chromosome CDS806935 750 + 0.533333
phbB RHE_CH04019 acetoacetyl-CoA reductase proteinchromosome CDS4254535 726 + 0.588154
pncA RHE_CH02821 pyrazinamidase/nicotinamidase proteinchromosome CDS2943192 627 + 0.633174
raiI RHE_PF00440 autoinducer synthesis proteinp42f CDS492770 639 - 0.602504
rapAch RHE_CH03231 autoaggregation proteinchromosome CDS3395448 708 + 0.555085
rzcA RHE_CH00724 rhizobiocin/RTX toxin and hemolysin-type calcium binding proteinchromosome CDS754521 5394 + 0.614386
vbsO RHE_PF00456 L-lysine 6-monooxygenase (Lysine N(6)-hydroxylase) proteinp42f CDS512498 1359 - 0.626932
vbsS RHE_PF00457 vicibactin biosynthesis non-ribosomal peptide synthase proteinp42f CDS513853 3993 - 0.647383