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2024-05-19 17:32:34

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Thiobacillus denitrificans ATCC 25259, ATCC 25259

Number of genes found: 61

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Thiobacillus denitrificans ATCC 25259, ATCC 25259
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tbd_1242 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1303633 756 + 0.666667
NA Tbd_1549 3-oxoacyl-(acyl-carrier-protein) reductaseSubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; chromosome CDS1633307 771 - 0.674449
NA Tbd_0247 ABC transport system permease proteinSubName: Full=ABC transport system permease protein; chromosome CDS269892 1095 + 0.708676
NA Tbd_0248 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; Flags: Precursor; chromosome CDS270986 768 + 0.669271
NA Tbd_1324 Copper-resistance protein CopASubName: Full=Copper-resistance protein CopA; Flags: Precursor; chromosome CDS1403210 1686 + 0.644721
NA Tbd_0480 dienelactone hydrolase family proteinSubName: Full=Dienelactone hydrolase family protein; Flags: Precursor; chromosome CDS502315 783 + 0.641124
NA Tbd_2169 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2254052 747 + 0.702811
NA Tbd_2150 TRAP transporter, small subunitSubName: Full=TRAP transporter, small subunit; chromosome CDS2237069 540 + 0.674074
NA Tbd_2491 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2564170 906 + 0.684327
NA Tbd_0312 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS336394 651 - 0.686636
NA Tbd_1072 conserved hypothetical protein containing twin-arginine translocation pathway signalSubName: Full=Uncharacterized protein; chromosome CDS1130477 2121 - 0.664309
NA Tbd_1190 ATP-binding ABC transporter proteinSubName: Full=ATP-binding ABC transporter protein; chromosome CDS1251055 846 + 0.659574
NA Tbd_1664 methyl-transferaseSubName: Full=Methyl-transferase; chromosome CDS1747939 738 - 0.644986
NA Tbd_0898 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS947784 912 + 0.529605
NA Tbd_1202 twin-arginine translocation pathway signalSubName: Full=Twin-arginine translocation pathway signal; Flags: Precursor; chromosome CDS1262111 759 - 0.700922
NA Tbd_2785 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome CDS2866289 765 + 0.703268
NA Tbd_2330 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2404125 606 - 0.674918
NA Tbd_1896 putative signal peptide proteinSubName: Full=Putative signal peptide protein; Flags: Precursor; chromosome CDS1993586 636 - 0.657233
NA Tbd_2269 putative dienelactone hydrolaseSubName: Full=Putative dienelactone hydrolase; Flags: Precursor; chromosome CDS2340520 801 + 0.695381
NA Tbd_0720 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS760524 1923 - 0.712949
NA Tbd_1055 S-adenosylmethionine-dependentmethyltransferaseSubName: Full=S-adenosylmethionine-dependent methyltransferase; chromosome CDS1118802 657 - 0.677321
NA Tbd_2151 TRAP dicarboxylate transporter, DctM subunitSubName: Full=TRAP dicarboxylate transporter, DctM subunit; Flags: Precursor; chromosome CDS2237613 1395 + 0.685305
NA Tbd_2645 carboxysome shell protein CsoS1ASubName: Full=Carboxysome shell protein CsoS1A; chromosome CDS2719807 306 - 0.699346
NA Tbd_1900 ABC transporter ATPaseSubName: Full=ABC transporter ATPase; chromosome CDS1996897 813 - 0.651906
NA Tbd_0157 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS168704 615 + 0.695935
NA Tbd_2648 carboxysome protein ASubName: Full=Carboxysome protein A; chromosome CDS2720749 255 - 0.654902
NA Tbd_0685 ABC transporter, ATPase proteinSubName: Full=ABC transporter, ATPase protein; chromosome CDS726651 708 - 0.720339
NA Tbd_2646 carboxysome shell protein, CsoS1CSubName: Full=Carboxysome shell protein, CsoS1C; chromosome CDS2720148 300 - 0.67
NA Tbd_2756 3-oxoacyl-(ACP) reductaseSubName: Full=3-oxoacyl-(ACP) reductase; Flags: Precursor; chromosome CDS2835200 720 + 0.7
NA Tbd_0032 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS31407 597 - 0.670017
NA Tbd_0924 3-oxoacyl-(acyl-carrier protein) reductaseSubName: Full=3-oxoacyl-(Acyl-carrier protein) reductase; chromosome CDS978929 783 - 0.671775
NA Tbd_2162 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2247614 603 + 0.618574
NA Tbd_0322 Biotin biosynthesis protein BioCRecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome CDS345807 921 + 0.707926
NA Tbd_0978 ABC-type transport system periplasmic componentSubName: Full=ABC-type transport system periplasmic component; Flags: Precursor; chromosome CDS1042328 927 - 0.655879
NA Tbd_2753 probable 3-oxoacyl-(acyl-carrier-protein) synthaseSubName: Full=Probable 3-oxoacyl-(Acyl-carrier-protein) synthase; chromosome CDS2832708 1221 + 0.727273
NA Tbd_0249 ABC-type transport system periplasmic componentSubName: Full=ABC-type transport system periplasmic component; Flags: Precursor; chromosome CDS271743 948 + 0.658228
NA Tbd_0980 ABC-type transport system ipermease componentSubName: Full=ABC-type transport system ipermease component; chromosome CDS1043700 795 - 0.623899
NA Tbd_1469 short-chain dehydrogenase/reductaseSubName: Full=Short-chain dehydrogenase/reductase; chromosome CDS1553511 705 - 0.676596
NA Tbd_0734 putative short chain dehydrogenaseSubName: Full=Putative short chain dehydrogenase; chromosome CDS777404 729 - 0.696845
NA Tbd_2744 acyl carrier protein, putativeSubName: Full=Acyl carrier protein, putative; chromosome CDS2824727 270 + 0.614815
NA Tbd_0718 iron transporterSubName: Full=Iron transporter; chromosome CDS757508 1842 - 0.691097
NA Tbd_1898 putative ABC transporter substrate-binding proteinSubName: Full=Putative ABC transporter substrate-binding protein; Flags: Precursor; chromosome CDS1995646 468 - 0.617521
NA Tbd_1899 Protein of unknown function DUF140SubName: Full=Uncharacterized protein; chromosome CDS1996116 789 - 0.662864
NA Tbd_1059 rRNA (guanine-N1-)-methyltransferase, putativeSubName: Full=rRNA (Guanine-N1-)-methyltransferase, putative; chromosome CDS1121794 849 - 0.706714
NA Tbd_2752 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2831965 735 + 0.72381
NA Tbd_2644 Carboxysome structural peptide CsoS1BSubName: Full=Carboxysome structural peptide CsoS1B; chromosome CDS2719419 375 - 0.706667
NA Tbd_1732 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1815801 1512 - 0.714286
NA Tbd_2701 short-chain dehydrogenase/reductase (SDR) superfamilySubName: Full=Short-chain dehydrogenase/reductase (SDR) superfamily; chromosome CDS2783411 741 - 0.665317
NA Tbd_0682 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS722401 885 - 0.658757
NA Tbd_2647 Carboxysome protein BSubName: Full=Carboxysome protein B; chromosome CDS2720432 318 - 0.603774
NA Tbd_1428 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1517953 807 + 0.690211
NA Tbd_1076 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1134757 747 - 0.639893
NA Tbd_1355 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1431267 4917 - 0.688021
NA Tbd_1722 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1807788 1053 - 0.649573
NA Tbd_1548 Acyl carrier protein (ACP)RecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1632987 234 - 0.568376
NA Tbd_1886 possible oxo-acyl acyl carrier protein dehydrogenaseSubName: Full=Possible oxo-acyl acyl carrier protein dehydrogenase; Flags: Precursor; chromosome CDS1985170 729 - 0.556927
NA Tbd_1547 3-oxoacyl-(acyl-carrier-protein) synthase I/IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1631554 1233 - 0.641525
NA Tbd_2025 histone deacetylase family proteinSubName: Full=Histone deacetylase family protein; chromosome CDS2116263 924 + 0.693723
NA Tbd_0684 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS724165 2490 - 0.712851
NA Tbd_2164 transporter, periplasmic componentSubName: Full=Transporter, periplasmic component; Flags: Precursor; chromosome CDS2249008 1071 - 0.674136
NA Tbd_1699 probable oxidoreductaseSubName: Full=Probable oxidoreductase; Flags: Precursor; chromosome CDS1790529 744 + 0.688172