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2024-05-06 16:18:54

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Pseudomonas fluorescens PfO-1, PfO-1

Number of genes found: 192

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas fluorescens PfO-1, PfO-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pfl_0233 conserved hypothetical proteinchromosome CDS275436 630 - 0.620635
NA Pfl_2327 Catechol 1,2-dioxygenasechromosome CDS2682421 915 + 0.629508
NA Pfl_1846 Amino acid adenylationchromosome CDS2081304 13509 + 0.633133
NA Pfl_5211 Short-chain dehydrogenase/reductase SDRchromosome CDS5860375 825 + 0.604849
NA Pfl_3810 Copper-resistance protein CopAchromosome CDS4310828 1719 + 0.640489
NA Pfl_4354 AMP-dependent synthetase and ligasechromosome CDS4907120 1689 - 0.614565
NA Pfl_2001 Multicopper oxidase, type 2chromosome CDS2281873 2811 + 0.629669
NA Pfl_1870 hypothetical proteinchromosome CDS2132921 330 - 0.557576
NA Pfl_2267 Amino acid adenylationchromosome CDS2611941 9096 + 0.644679
NA Pfl_1435 Isochorismatase hydrolasechromosome CDS1609907 642 + 0.607477
NA Pfl_4156 Acyl carrier proteinchromosome CDS4693743 237 - 0.510549
NA Pfl_1329 hypothetical proteinchromosome CDS1503123 369 + 0.601626
NA Pfl_2695 Short-chain dehydrogenase/reductase SDRchromosome CDS3104487 858 - 0.620047
NA Pfl_2735 Phytanoyl-CoA dioxygenasechromosome CDS3153024 834 + 0.571942
NA Pfl_0367 Imidazolonepropionasechromosome CDS419775 1206 + 0.645937
NA Pfl_2238 Short-chain dehydrogenase/reductase SDRchromosome CDS2568586 528 - 0.632576
NA Pfl_3628 hypothetical proteinchromosome CDS4101939 951 + 0.608833
NA Pfl_1792 Benzoate membrane transport proteinchromosome CDS1996559 1191 - 0.642317
NA Pfl_2234 Short-chain dehydrogenase/reductase SDRchromosome CDS2563983 765 - 0.640523
NA Pfl_2686 Lipase, class 3chromosome CDS3092982 1854 + 0.625674
NA Pfl_1624 Thioesterase superfamilychromosome CDS1814806 453 + 0.593819
NA Pfl_1718 Isochorismatase hydrolasechromosome CDS1911817 591 - 0.634518
NA Pfl_0903 Short-chain dehydrogenase/reductase SDRchromosome CDS1045756 912 + 0.619518
NA Pfl_0029 conserved hypothetical proteinchromosome CDS31846 327 + 0.620795
NA Pfl_2883 conserved hypothetical proteinchromosome CDS3324253 774 - 0.638243
NA Pfl_5385 Fumarylacetoacetate (FAA) hydrolasechromosome CDS6048054 666 - 0.623123
NA Pfl_5042 Isochorismatase hydrolasechromosome CDS5679358 555 + 0.643243
NA Pfl_1271 Intradiol ring-cleavage dioxygenasechromosome CDS1444347 567 + 0.608466
NA Pfl_1513 conserved hypothetical proteinchromosome CDS1700034 1227 + 0.641402
NA Pfl_4039 3-oxoacyl-acyl carrier protein synthase IIchromosome CDS4565534 276 - 0.634058
NA Pfl_4585 Twin-arginine translocation pathway signalchromosome CDS5181107 1383 - 0.631959
NA Pfl_0892 Short-chain dehydrogenase/reductase SDRchromosome CDS1037495 711 - 0.61744
NA Pfl_1904 Short-chain dehydrogenase/reductase SDRchromosome CDS2175548 768 + 0.634115
NA Pfl_2409 Phytanoyl-CoA dioxygenasechromosome CDS2767675 693 - 0.606061
NA Pfl_1380 conserved hypothetical proteinchromosome CDS1552958 711 + 0.600563
NA Pfl_1270 Intradiol ring-cleavage dioxygenasechromosome CDS1443641 705 + 0.642553
NA Pfl_0302 Short-chain dehydrogenase/reductase SDRchromosome CDS350434 711 + 0.616034
NA Pfl_4321 Short-chain dehydrogenase/reductase SDRchromosome CDS4877909 756 + 0.634921
NA Pfl_1845 Amino acid adenylationchromosome CDS2064343 16965 + 0.640849
NA Pfl_2169 conserved hypothetical proteinchromosome CDS2450639 672 - 0.641369
NA Pfl_3278 Short-chain dehydrogenase/reductase SDRchromosome CDS3761195 831 - 0.631769
NA Pfl_4142 Short-chain dehydrogenase/reductase SDRchromosome CDS4681364 819 - 0.60928
NA Pfl_0863 ABC transporter-likechromosome CDS1010765 813 + 0.624846
NA Pfl_0307 Methyltransferase FkbMchromosome CDS353183 816 - 0.613971
NA Pfl_4155 Beta-ketoacyl synthasechromosome CDS4692390 1278 - 0.626761
NA Pfl_0301 DSBA oxidoreductasechromosome CDS349756 645 + 0.624806
NA Pfl_5676 conserved hypothetical proteinchromosome CDS6360063 819 - 0.615385
NA Pfl_1215 Isochorismatase hydrolasechromosome CDS1389019 558 + 0.603943
NA Pfl_2266 Amino acid adenylationchromosome CDS2607835 4110 + 0.646959
NA Pfl_3655 AMP-dependent synthetase and ligasechromosome CDS4136431 1698 - 0.613663
NA Pfl_2265 Amino acid adenylationchromosome CDS2598830 9009 + 0.644689
NA Pfl_1509 Hemolysin-type calcium-binding regionchromosome CDS1692501 4887 + 0.603438
NA Pfl_2227 conserved hypothetical proteinchromosome CDS2555407 1545 + 0.606472
NA Pfl_0438 Phosphopantetheine-bindingchromosome CDS497452 255 - 0.596078
NA Pfl_1840 Short-chain dehydrogenase/reductase SDRchromosome CDS2058753 801 - 0.654182
NA Pfl_3985 Thiopurine S-methyltransferasechromosome CDS4514194 654 - 0.603976
NA Pfl_0866 Toluene tolerancechromosome CDS1012853 651 + 0.58679
NA Pfl_0422 Beta-ketoacyl synthasechromosome CDS481493 1236 - 0.645631
NA Pfl_1850 Cyclic peptide transporterchromosome CDS2105190 1659 - 0.604581
NA Pfl_1452 hypothetical proteinchromosome CDS1623938 249 - 0.562249
NA Pfl_2541 NodSchromosome CDS2907649 600 - 0.636667
NA Pfl_2783 Short-chain dehydrogenase/reductase SDRchromosome CDS3208616 984 + 0.646341
NA Pfl_1844 Thioesterasechromosome CDS2063411 738 + 0.643631
NA Pfl_2079 conserved hypothetical proteinchromosome CDS2364224 1047 - 0.624642
NA Pfl_5173 Biotin biosynthesis protein BioCchromosome CDS5818500 807 - 0.61834
NA Pfl_2961 Intradiol ring-cleavage dioxygenasechromosome CDS3398667 927 - 0.567422
NA Pfl_4582 methyltransferasechromosome CDS5178780 744 + 0.612903
NA Pfl_3079 3-hydroxybutyrate dehydrogenasechromosome CDS3523882 774 + 0.644703
NA Pfl_4083 Short-chain dehydrogenase/reductase SDRchromosome CDS4614805 741 + 0.614035
NA Pfl_2887 Nicotinamidasechromosome CDS3327072 627 + 0.625199
NA Pfl_0723 Amidohydrolasechromosome CDS851003 1458 + 0.638546
NA Pfl_0133 von Willebrand factor, type Achromosome CDS145006 15657 - 0.629112
NA Pfl_1975 conserved hypothetical proteinchromosome CDS2251041 5826 + 0.650017
NA Pfl_2976 Possible Transcriptional Regulator, Fis familychromosome CDS3415294 1881 - 0.523658
NA Pfl_2678 Peptidase M10A and M12B, matrixin and adamalysinchromosome CDS3078274 1461 + 0.616016
NA Pfl_0425 Beta-ketoacyl synthasechromosome CDS483910 1197 - 0.651629
NA Pfl_3940 Amino acid adenylationchromosome CDS4454372 12999 - 0.640972
NA Pfl_1849 Amino acid adenylationchromosome CDS2101002 4152 - 0.630299
NA Pfl_2326 Muconolactone delta-isomerasechromosome CDS2682095 291 + 0.611684
NA Pfl_1087 rRNA (guanine-N(1)-)-methyltransferasechromosome CDS1257395 810 - 0.641975
NA Pfl_4496 conserved hypothetical proteinchromosome CDS5071062 669 - 0.571001
NA Pfl_2727 Short-chain dehydrogenase/reductase SDRchromosome CDS3143895 759 + 0.575758
NA Pfl_3352 Short-chain dehydrogenase/reductase SDRchromosome CDS3826693 789 + 0.633714
NA Pfl_0865 conserved hypothetical proteinchromosome CDS1012374 468 + 0.570513
NA Pfl_4157 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS4694176 744 - 0.587366
NA Pfl_4038 Beta-ketoacyl synthasechromosome CDS4564535 894 - 0.665548
NA Pfl_4709 AMP-dependent synthetase and ligasechromosome CDS5317074 1683 - 0.616162
NA Pfl_2960 Benzoate membrane transport proteinchromosome CDS3397383 1200 - 0.548333
NA Pfl_0864 Protein of unknown function DUF140chromosome CDS1011577 798 + 0.588972
NA Pfl_0317 conserved hypothetical proteinchromosome CDS362679 450 + 0.58
NA Pfl_4705 Peptidase M10A and M12B, matrixin and adamalysinchromosome CDS5307043 3402 + 0.546737
NA Pfl_2092 UbiE/COQ5 methyltransferasechromosome CDS2377230 813 + 0.653137
NA Pfl_2235 Fumarylacetoacetate (FAA) hydrolasechromosome CDS2564786 693 - 0.640693
NA Pfl_2212 Amino acid adenylationchromosome CDS2503777 16269 + 0.641035
NA Pfl_4204 Phenylacetic acid degradation-like proteinchromosome CDS4745235 444 - 0.623874
NA Pfl_0137 Taurine catabolism dioxygenase TauD/TfdAchromosome CDS166188 897 + 0.632107
NA Pfl_3564 Isochorismatase hydrolasechromosome CDS4034547 534 - 0.629214
NA Pfl_1753 Short-chain dehydrogenase/reductase SDRchromosome CDS1947348 747 - 0.634538
NA Pfl_0439 acyl carrier protein, putativechromosome CDS497716 261 - 0.582375
NA Pfl_1869 N-acetyltransferasechromosome CDS2132090 828 + 0.630435
NA Pfl_1967 Isochorismatase hydrolasechromosome CDS2243251 627 + 0.591707
NA Pfl_2965 Short-chain dehydrogenase/reductase SDRchromosome CDS3402571 762 - 0.594488
NA Pfl_3636 Sigma-54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domainschromosome CDS4110063 1851 + 0.610481
NA Pfl_2270 Taurine dioxygenasechromosome CDS2621938 870 + 0.628736
NA Pfl_4360 Intradiol ring-cleavage dioxygenasechromosome CDS4912703 717 - 0.620642
NA Pfl_2526 Short-chain dehydrogenase/reductase SDRchromosome CDS2889380 747 + 0.618474
NA Pfl_2913 Short-chain dehydrogenase/reductase SDRchromosome CDS3358211 705 - 0.614184
NA Pfl_2185 conserved hypothetical proteinchromosome CDS2469243 759 + 0.662714
NA Pfl_2211 Amino acid adenylationchromosome CDS2497181 6411 + 0.644517
NA Pfl_2753 Short-chain dehydrogenase/reductase SDRchromosome CDS3174852 783 - 0.573435
NA Pfl_1187 Short-chain dehydrogenase/reductase SDRchromosome CDS1354889 771 - 0.627756
NA Pfl_0213 Taurine dioxygenasechromosome CDS253352 921 + 0.627579
NA Pfl_4213 Beta-ketoacyl synthasechromosome CDS4755213 1221 + 0.624079
NA Pfl_3272 Isochorismatase hydrolasechromosome CDS3754161 639 + 0.591549
NA Pfl_2962 Muconolactone delta-isomerasechromosome CDS3399647 291 - 0.594502
NA Pfl_4247 Hemolysin-type calcium-binding regionchromosome CDS4791841 3642 - 0.579352
NA Pfl_2468 Short-chain dehydrogenase/reductase SDRchromosome CDS2821523 765 - 0.630065
NA Pfl_3537 Phenylacetic acid degradation-like proteinchromosome CDS4014353 441 + 0.619048
NA Pfl_0633 methyltransferase, putativechromosome CDS743820 750 + 0.633333
NA Pfl_1891 UbiE/COQ5 methyltransferasechromosome CDS2160232 768 + 0.627604
NA Pfl_1077 Protein of unknown function DUF548chromosome CDS1244943 846 + 0.641844
NA Pfl_2375 conserved hypothetical proteinchromosome CDS2733331 495 - 0.644444
NA Pfl_4016 Protein of unknown function DUF214chromosome CDS4540100 2505 + 0.644711
NA Pfl_3908 DSBA oxidoreductasechromosome CDS4425163 591 + 0.580372
NA Pfl_2967 Aromatic-ring-hydroxylating dioxygenase, beta subunitchromosome CDS3404444 486 - 0.54321
NA Pfl_3907 Short-chain dehydrogenase/reductase SDRchromosome CDS4424401 729 + 0.592593
NA Pfl_4015 ABC transporter-likechromosome CDS4539417 684 + 0.640351
NA Pfl_4242 Dienelactone hydrolasechromosome CDS4784106 792 + 0.623737
NA Pfl_1847 Amino acid adenylationchromosome CDS2094809 3213 + 0.641457
NA Pfl_0126 Amino acid adenylation:Thioester reductasechromosome CDS135065 3390 - 0.630678
NA Pfl_2316 Benzoate membrane transport proteinchromosome CDS2670274 1206 - 0.635158
NA Pfl_5234 Gamma-butyrobetaine hydroxylasechromosome CDS5888874 1164 + 0.623711
NA Pfl_4106 Short-chain dehydrogenase/reductase SDRchromosome CDS4647806 888 - 0.608108
NA Pfl_1623 Phenylacetic acid degradation-like proteinchromosome CDS1814273 537 + 0.575419
NA Pfl_1301 conserved hypothetical proteinchromosome CDS1477473 1233 + 0.59854
NA Pfl_1238 Short-chain dehydrogenase/reductase SDRchromosome CDS1410320 600 - 0.62
NA Pfl_0676 Short-chain dehydrogenase/reductase SDRchromosome CDS791376 696 - 0.622126
NA Pfl_0423 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS482728 729 - 0.633745
NA Pfl_2213 Amino acid adenylationchromosome CDS2520042 14649 + 0.642569
NA Pfl_1859 L-ornithine N5-oxygenasechromosome CDS2117838 1338 + 0.61435
NA Pfl_0258 Phenylacetic acid degradation-like proteinchromosome CDS304507 384 - 0.645833
NA Pfl_3522 Short-chain dehydrogenase/reductase SDRchromosome CDS4001240 798 - 0.652882
NA Pfl_4194 Short-chain dehydrogenase/reductase SDRchromosome CDS4734973 762 - 0.616798
NA Pfl_3470 Short-chain dehydrogenase/reductase SDRchromosome CDS3955828 744 + 0.627688
NA Pfl_2280 Beta-lactamase-likechromosome CDS2630141 1968 - 0.636687
NA Pfl_4977 hypothetical proteinchromosome CDS5605388 3456 + 0.581887
NA Pfl_3472 putative cytochrome p450 oxidoreductasechromosome CDS3957409 1101 + 0.610354
NA Pfl_5678 conserved hypothetical proteinchromosome CDS6362026 885 - 0.642938
NA Pfl_2058 Isochorismatase hydrolasechromosome CDS2345992 645 - 0.648062
NA Pfl_1728 AMP-dependent synthetase and ligasechromosome CDS1920531 1839 + 0.621533
NA Pfl_5511 possible methyltransferasechromosome CDS6176540 750 + 0.618667
NA Pfl_1626 Dienelactone hydrolasechromosome CDS1817313 729 + 0.611797
NA Pfl_2322 2-chlorobenzoate 1,2-dioxygenasechromosome CDS2678602 489 + 0.586912
NA Pfl_0427 conserved hypothetical proteinchromosome CDS485585 726 - 0.610193
NA Pfl_5631 Histone deacetylase superfamilychromosome CDS6306421 1026 + 0.622807
NA Pfl_0655 Short-chain dehydrogenase/reductase SDRchromosome CDS767463 1353 - 0.662971
NA Pfl_2721 Short-chain dehydrogenase/reductase SDRchromosome CDS3138092 750 - 0.634667
NA Pfl_4738 Short-chain dehydrogenase/reductase SDRchromosome CDS5343158 783 + 0.62069
NA Pfl_2324 Short-chain dehydrogenase/reductase SDRchromosome CDS2680172 762 + 0.650919
NA Pfl_2745 AMP-dependent synthetase and ligasechromosome CDS3163115 1560 - 0.599359
NA Pfl_3054 UbiE/COQ5 methyltransferasechromosome CDS3495996 873 - 0.652921
NA Pfl_4505 Short-chain dehydrogenase/reductase SDRchromosome CDS5080547 759 + 0.620553
NA Pfl_5468 ThiJ/PfpIchromosome CDS6136250 669 + 0.626308
NA Pfl_2298 Isochorismatase hydrolasechromosome CDS2649709 633 + 0.595577
NA Pfl_4068 hypothetical proteinchromosome CDS4593802 2037 + 0.549337
NA Pfl_4988 Sigma-54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domainschromosome CDS5617831 1917 - 0.630673
NA Pfl_2439 Short-chain dehydrogenase/reductase SDRchromosome CDS2792396 750 + 0.641333
NA Pfl_0945 Short-chain dehydrogenase/reductase SDRchromosome CDS1097298 825 - 0.624242
NA Pfl_0253 Taurine catabolism dioxygenase TauD/TfdAchromosome CDS298990 843 - 0.625148
NA Pfl_0910 Homogentisate 1,2-dioxygenasechromosome CDS1060280 1296 + 0.640432
NA Pfl_4243 4'-phosphopantetheinyl transferasechromosome CDS4784981 735 + 0.638095
NA Pfl_3363 Peptidase M10A and M12B, matrixin and adamalysinchromosome CDS3839091 1407 - 0.623312
NA Pfl_0911 Fumarylacetoacetasechromosome CDS1061579 1305 + 0.64751
NA Pfl_3419 Short-chain dehydrogenase/reductase SDRchromosome CDS3900062 768 + 0.614583
NA Pfl_0038 ABC transporter-likechromosome CDS42299 804 + 0.672886
NA Pfl_4918 Histone deacetylase superfamilychromosome CDS5540845 921 + 0.635179
NA Pfl_0039 conserved hypothetical proteinchromosome CDS43104 939 + 0.618743
NA Pfl_0736 Tellurite resistance protein TehBchromosome CDS863118 627 - 0.425837
NA Pfl_0037 Protein of unknown function DUF140chromosome CDS41154 1149 + 0.64752
NA Pfl_3946 Short-chain dehydrogenase/reductase SDRchromosome CDS4472988 870 + 0.631034
NA Pfl_3895 Histone deacetylase superfamilychromosome CDS4405620 1026 - 0.635478
NA Pfl_4583 Methyltransferase, putativechromosome CDS5179520 957 + 0.607106
NA Pfl_3533 Peptidase S58, DmpAchromosome CDS4010937 1119 + 0.645219
NA Pfl_0308 conserved hypothetical proteinchromosome CDS354343 1206 - 0.608624
NA Pfl_5324 Methionine biosynthesis MetWchromosome CDS5986888 621 + 0.597423
NA Pfl_2006 conserved hypothetical proteinchromosome CDS2289299 807 + 0.605948
NA Pfl_3787 conserved hypothetical proteinchromosome CDS4285417 714 - 0.60084
NA Pfl_4353 AMP-dependent synthetase and ligasechromosome CDS4905070 1698 - 0.597762
NA Pfl_2685 Triacylglycerol lipasechromosome CDS3091193 1689 + 0.632327
NA Pfl_3815 hypothetical proteinchromosome CDS4315938 360 - 0.586111
NA Pfl_2869 Short-chain dehydrogenase/reductase SDRchromosome CDS3309501 762 - 0.648294
NA Pfl_1328 probable methyl transferasechromosome CDS1501865 729 - 0.611797