TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-17 10:04:14

Gene list

Applied filters:

COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 85

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SSO_1470 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1546340 411 + 0.508516
NA SSO_2178 unknown protein encoded by prophageSubName: Full=Uncharacterized protein; chromosome CDS2281713 432 + 0.409722
NA SSO_1030 putative synthetaseRecName: Full=Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB; EC=3.5.1.110; AltName: Full=Ureidoacrylate amidohydrolase; chromosome CDS1108871 735 - 0.559184
NA SSO_1886 unknown protein encoded within prophageSubName: Full=Uncharacterized protein; chromosome CDS1985869 657 + 0.414003
NA SSO_1662 putative N-hydroxyarylamine O-acetyltransferaseSubName: Full=Putative N-hydroxyarylamine O-acetyltransferase; chromosome CDS1760735 846 - 0.518913
NA SSO_1736 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1839495 1758 - 0.505119
NA SSO_2527 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2663984 507 - 0.579882
NA SSO_1887 putative bacteriophage tail proteinSubName: Full=Putative bacteriophage tail protein; chromosome CDS1987134 612 + 0.431373
acp SSO_P086 AcpSubName: Full=Acp; pSS_046 CDS80158 237 - 0.295359
acpP SSO_1114 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1192906 237 + 0.481013
bioC SSO_0756 biotin biosynthesis proteinRecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome CDS800608 756 + 0.564815
caiC SSO_0043 probable crotonobetaine/carnitine-CoA ligaseRecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; chromosome CDS44336 1569 - 0.511791
cchA SSO_2537 detox proteinSubName: Full=Detox protein; chromosome CDS2674223 336 - 0.568452
cchB SSO_2536 detox proteinSubName: Full=Detox protein; chromosome CDS2673829 288 - 0.53125
entA SSO_0547 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesisSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis; chromosome CDS588082 747 + 0.575636
entB SSO_0546 2,3-dihydro-2,3-dihydroxybenzoate synthetaseSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate synthetase; chromosome CDS587225 858 + 0.55711
entC SSO_0544 isochorismate hydroxymutase 2SubName: Full=Isochorismate hydroxymutase 2; chromosome CDS584416 1176 + 0.562925
entD SSO_0533 enterochelin synthetase, component DSubName: Full=Enterochelin synthetase, component D; chromosome CDS568904 630 - 0.466667
entE SSO_0545 2,3-dihydroxybenzoate-AMP ligaseSubName: Full=2,3-dihydroxybenzoate-AMP ligase; chromosome CDS585601 1611 + 0.560521
entF SSO_0537 ATP-dependent serine activating enzymeSubName: Full=ATP-dependent serine activating enzyme; chromosome CDS573602 3882 + 0.563627
fabB SSO_2381 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome CDS2512163 1221 - 0.562654
fabF SSO_1115 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1193230 1242 + 0.533011
fabG SSO_1113 3-oxoacyl-[acyl-carrier-protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; chromosome CDS1191961 735 + 0.517007
fadD SSO_1356 acyl-CoA synthetaseSubName: Full=Acyl-CoA synthetase; chromosome CDS1430364 1686 + 0.511862
hcaA2 SSO_2621 small terminal subunit of phenylpropionate dioxygenaseRecName: Full=3-phenylpropionate/cinnamic acid dioxygenase subunit beta; EC=1.14.12.19; AltName: Full=Digoxigenin subunit beta; chromosome CDS2773582 519 + 0.518304
hcaB SSO_2623 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genaseRecName: Full=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase; EC=1.3.1.87; AltName: Full=2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; AltName: Full=3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase; AltName: Full=CI-dihydrodiol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=PP-dihydrodiol dehydrogenase; chromosome CDS2774417 813 + 0.562116
hdhA SSO_1541 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acidsSubName: Full=NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids; chromosome CDS1616635 768 + 0.484375
hpaB SSO_4489 4-hydroxyphenylacetate 3-monooxygenaseSubName: Full=4-hydroxyphenylacetate 3-monooxygenase; chromosome CDS4762425 1563 - 0.543826
hpaG SSO_4499 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomeraseSubName: Full=5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase; chromosome CDS4772375 1290 - 0.556589
hpaH SSO_4495 2-oxo-hept-3-ene-1,7-dioate hydrataseSubName: Full=2-oxo-hept-3-ene-1,7-dioate hydratase; chromosome CDS4768755 804 - 0.585821
idnO SSO_4451 5-keto-D-gluconate 5-reductaseSubName: Full=5-keto-D-gluconate 5-reductase; chromosome CDS4723050 765 - 0.494118
iucA SSO_3601 siderophore biosynthesis proteinSubName: Full=Siderophore biosynthesis protein; chromosome CDS3767550 1725 + 0.543768
iucC SSO_3603 siderophore biosynthesis proteinSubName: Full=Siderophore biosynthesis protein; chromosome CDS3770222 1743 + 0.545037
iucD SSO_3604 lysine:N6-hydroxylaseSubName: Full=Lysine:N6-hydroxylase; chromosome CDS3771961 1338 + 0.467862
kduD SSO_3002 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS3154779 762 - 0.515748
menE SSO_2321 o-succinylbenzoate-CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; chromosome CDS2449417 1422 - 0.554852
menF SSO_2326 isochorismate hydroxymutase 2SubName: Full=Isochorismate hydroxymutase 2; chromosome CDS2455183 1071 - 0.542484
mhpD SSO_0329 2-keto-4-pentenoate hydrataseRecName: Full=2-keto-4-pentenoate hydratase; EC=4.2.1.80; AltName: Full=2-hydroxypentadienoic acid hydratase; chromosome CDS356486 816 + 0.556373
mhpF SSO_0330 acetaldehyde dehydrogenaseRecName: Full=Acetaldehyde dehydrogenase; EC=1.2.1.10; AltName: Full=Acetaldehyde dehydrogenase [acetylating]; chromosome CDS357298 951 + 0.547844
pduA SSO_2058 putative propanediol utilization protein: polyhedral bodiesSubName: Full=Putative propanediol utilization protein: polyhedral bodies; chromosome CDS2157020 285 + 0.526316
pduC SSO_2060 putative propanediol utilization protein: glycerol dehydratase large subunitSubName: Full=Putative propanediol utilization protein: glycerol dehydratase large subunit; chromosome CDS2158132 1665 + 0.511712
pduE SSO_2062 putative propanediol utilization protein: diol dehydratase small subunitSubName: Full=Putative propanediol utilization protein: diol dehydratase small subunit; chromosome CDS2160489 519 + 0.481696
pduJ SSO_2065 putative propanediol utilization protein: polyhedral bodiesSubName: Full=Putative propanediol utilization protein: polyhedral bodies; chromosome CDS2163209 276 + 0.528986
pduK SSO_2066 putative propanediol utilization protein: polyhedral bodiesSubName: Full=Putative propanediol utilization protein: polyhedral bodies; chromosome CDS2163508 423 + 0.555556
pduL SSO_2067 putative propanediol utilization proteinRecName: Full=Phosphate propanoyltransferase; EC=2.3.1.222; chromosome CDS2163933 633 + 0.526066
pduN SSO_2069 putative propanediol utilization protein: polyhedral bodiesSubName: Full=Putative propanediol utilization protein: polyhedral bodies; chromosome CDS2165057 276 + 0.568841
pduT SSO_2074 putative propanediol utilization protein: polyhedral bodiesSubName: Full=Putative propanediol utilization protein: polyhedral bodies; chromosome CDS2170201 555 + 0.535135
smtA SSO_0923 S-adenosylmethionine-dependentmethyltransferaseSubName: Full=S-adenosylmethionine-dependent methyltransferase; chromosome CDS989244 786 + 0.517812
sorD SSO_4198 putative sorbitol-6-phosphate 2-dehydrogenaseSubName: Full=Putative sorbitol-6-phosphate 2-dehydrogenase; chromosome CDS4449884 807 - 0.51425
sufI SSO_3159 suppressor of ftsIRecName: Full=Cell division protein FtsP; Flags: Precursor; chromosome CDS3317584 1413 - 0.564756
tauD SSO_0346 taurine dioxygenase, 2-oxoglutarate-dependentSubName: Full=Taurine dioxygenase, 2-oxoglutarate-dependent; chromosome CDS371877 852 + 0.545775
tehB SSO_1712 tellurite resistanceSubName: Full=Tellurite resistance; chromosome CDS1815669 594 - 0.454545
ucpA SSO_2515 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2652770 858 - 0.539627
yacK SSO_0131 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS146214 1551 + 0.541586
yafE SSO_0224 putative biotin synthesis proteinSubName: Full=Putative biotin synthesis protein; chromosome CDS248363 624 + 0.496795
yafS SSO_0227 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS251236 741 + 0.492578
ybbA SSO_0483 putative ATP-binding component of a transport systemSubName: Full=Putative ATP-binding component of a transport system; chromosome CDS512983 687 + 0.56623
ybbO SSO_0482 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS511590 810 - 0.538272
ybbP SSO_0485 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS513666 2415 + 0.575155
ybdB SSO_0548 conserved hypothetical proteinRecName: Full=Proofreading thioesterase EntH; EC=3.1.2.-; AltName: Full=Enterobactin synthase component H; chromosome CDS588831 414 + 0.574879
ycaC SSO_0898 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS958825 627 - 0.457735
ycgM SSO_1169 putative isomeraseSubName: Full=Putative isomerase; chromosome CDS1248351 660 + 0.518182
yciK SSO_1872 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1971200 759 + 0.527009
ydgB SSO_1554 putative oxidoreductaseRecName: Full=Dihydrofolate reductase FolM; Short=DHFR; EC=1.5.1.3; chromosome CDS1632975 723 - 0.517289
ydjB SSO_1387 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1461011 660 - 0.524242
yebH SSO_1338 putative enzymeSubName: Full=Putative enzyme; chromosome CDS1412278 810 + 0.511111
yecD SSO_1274 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1349015 600 - 0.525
yecO SSO_1250 conserved hypothetical proteinRecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS1326241 744 - 0.502688
yecP SSO_1249 putative enzymeRecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS1325273 972 - 0.521605
yeiN SSO_2221 conserved hypothetical proteinRecName: Full=Pseudouridine-5-phosphate glycosidase; Short=PsiMP glycosidase; EC=3.2.-.-; chromosome CDS2330191 939 - 0.467519
ygfF SSO_3055 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3214964 744 - 0.544355
yghA SSO_3147 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3306100 885 + 0.546893
yghYX SSO_3144 Predicted hydrolaseSubName: Full=Predicted hydrolase; chromosome CDS3303291 927 - 0.514563
yhbL SSO_3357 sigma cross-reacting protein 27A (SCRP-27A)SubName: Full=Sigma cross-reacting protein 27A (SCRP-27A); chromosome CDS3528880 663 - 0.526395
yhiQ SSO_3732 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome CDS3913732 753 - 0.586985
yigI SSO_3994 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4218323 486 - 0.526749
yjcS SSO_4265 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4530044 1998 - 0.51952
yjgI SSO_4429 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS4699793 714 - 0.540616
yohF SSO_2194 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2299442 762 - 0.553806
yojI SSO_2269 putative ATP-binding component of a transport systemSubName: Full=Putative ATP-binding component of a transport system; chromosome CDS2381166 1644 - 0.53528
yrbC SSO_3340 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3516330 636 - 0.522013
yrbD SSO_3341 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3516984 552 - 0.498188
yrbE SSO_3342 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3517540 783 - 0.550447
yrbF SSO_3343 putative ATP-binding component of a transport systemSubName: Full=Putative ATP-binding component of a transport system; chromosome CDS3518330 810 - 0.545679
ysgA SSO_4005 putative hydrolaseSubName: Full=Putative hydrolase; chromosome CDS4232801 690 - 0.543478