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2024-05-02 16:59:52

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 85

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_1470 conserved hypothetical proteinchromosome CDS1546340 411 + 0.508516
NA SSO_2178 unknown protein encoded by prophagechromosome CDS2281713 432 + 0.409722
NA SSO_1662 putative N-hydroxyarylamine O-acetyltransferasechromosome CDS1760735 846 - 0.518913
NA SSO_2527 conserved hypothetical proteinchromosome CDS2663984 507 - 0.579882
NA SSO_1736 conserved hypothetical proteinchromosome CDS1839495 1758 - 0.505119
NA SSO_1030 putative synthetasechromosome CDS1108871 735 - 0.559184
NA SSO_1887 putative bacteriophage tail proteinchromosome CDS1987134 612 + 0.431373
NA SSO_1886 unknown protein encoded within prophagechromosome CDS1985869 657 + 0.414003
acp SSO_P086 AcppSS_046 CDS80158 237 - 0.295359
acpP SSO_1114 acyl carrier proteinchromosome CDS1192906 237 + 0.481013
bioC SSO_0756 biotin biosynthesis proteinchromosome CDS800608 756 + 0.564815
caiC SSO_0043 probable crotonobetaine/carnitine-CoA ligasechromosome CDS44336 1569 - 0.511791
cchA SSO_2537 detox proteinchromosome CDS2674223 336 - 0.568452
cchB SSO_2536 detox proteinchromosome CDS2673829 288 - 0.53125
entA SSO_0547 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesischromosome CDS588082 747 + 0.575636
entB SSO_0546 2,3-dihydro-2,3-dihydroxybenzoate synthetasechromosome CDS587225 858 + 0.55711
entC SSO_0544 isochorismate hydroxymutase 2chromosome CDS584416 1176 + 0.562925
entD SSO_0533 enterochelin synthetase, component Dchromosome CDS568904 630 - 0.466667
entE SSO_0545 2,3-dihydroxybenzoate-AMP ligasechromosome CDS585601 1611 + 0.560521
entF SSO_0537 ATP-dependent serine activating enzymechromosome CDS573602 3882 + 0.563627
fabB SSO_2381 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2512163 1221 - 0.562654
fabF SSO_1115 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1193230 1242 + 0.533011
fabG SSO_1113 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1191961 735 + 0.517007
fadD SSO_1356 acyl-CoA synthetasechromosome CDS1430364 1686 + 0.511862
hcaA2 SSO_2621 small terminal subunit of phenylpropionate dioxygenasechromosome CDS2773582 519 + 0.518304
hcaB SSO_2623 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genasechromosome CDS2774417 813 + 0.562116
hdhA SSO_1541 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acidschromosome CDS1616635 768 + 0.484375
hpaB SSO_4489 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS4762425 1563 - 0.543826
hpaG SSO_4499 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4772375 1290 - 0.556589
hpaH SSO_4495 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS4768755 804 - 0.585821
idnO SSO_4451 5-keto-D-gluconate 5-reductasechromosome CDS4723050 765 - 0.494118
iucA SSO_3601 siderophore biosynthesis proteinchromosome CDS3767550 1725 + 0.543768
iucC SSO_3603 siderophore biosynthesis proteinchromosome CDS3770222 1743 + 0.545037
iucD SSO_3604 lysine:N6-hydroxylasechromosome CDS3771961 1338 + 0.467862
kduD SSO_3002 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3154779 762 - 0.515748
menE SSO_2321 o-succinylbenzoate-CoA ligasechromosome CDS2449417 1422 - 0.554852
menF SSO_2326 isochorismate hydroxymutase 2chromosome CDS2455183 1071 - 0.542484
mhpD SSO_0329 2-keto-4-pentenoate hydratasechromosome CDS356486 816 + 0.556373
mhpF SSO_0330 acetaldehyde dehydrogenasechromosome CDS357298 951 + 0.547844
pduA SSO_2058 putative propanediol utilization protein: polyhedral bodieschromosome CDS2157020 285 + 0.526316
pduC SSO_2060 putative propanediol utilization protein: glycerol dehydratase large subunitchromosome CDS2158132 1665 + 0.511712
pduE SSO_2062 putative propanediol utilization protein: diol dehydratase small subunitchromosome CDS2160489 519 + 0.481696
pduJ SSO_2065 putative propanediol utilization protein: polyhedral bodieschromosome CDS2163209 276 + 0.528986
pduK SSO_2066 putative propanediol utilization protein: polyhedral bodieschromosome CDS2163508 423 + 0.555556
pduL SSO_2067 putative propanediol utilization proteinchromosome CDS2163933 633 + 0.526066
pduN SSO_2069 putative propanediol utilization protein: polyhedral bodieschromosome CDS2165057 276 + 0.568841
pduT SSO_2074 putative propanediol utilization protein: polyhedral bodieschromosome CDS2170201 555 + 0.535135
smtA SSO_0923 S-adenosylmethionine-dependentmethyltransferasechromosome CDS989244 786 + 0.517812
sorD SSO_4198 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4449884 807 - 0.51425
sufI SSO_3159 suppressor of ftsIchromosome CDS3317584 1413 - 0.564756
tauD SSO_0346 taurine dioxygenase, 2-oxoglutarate-dependentchromosome CDS371877 852 + 0.545775
tehB SSO_1712 tellurite resistancechromosome CDS1815669 594 - 0.454545
ucpA SSO_2515 putative oxidoreductasechromosome CDS2652770 858 - 0.539627
yacK SSO_0131 conserved hypothetical proteinchromosome CDS146214 1551 + 0.541586
yafE SSO_0224 putative biotin synthesis proteinchromosome CDS248363 624 + 0.496795
yafS SSO_0227 conserved hypothetical proteinchromosome CDS251236 741 + 0.492578
ybbA SSO_0483 putative ATP-binding component of a transport systemchromosome CDS512983 687 + 0.56623
ybbO SSO_0482 putative oxidoreductasechromosome CDS511590 810 - 0.538272
ybbP SSO_0485 putative oxidoreductasechromosome CDS513666 2415 + 0.575155
ybdB SSO_0548 conserved hypothetical proteinchromosome CDS588831 414 + 0.574879
ycaC SSO_0898 conserved hypothetical proteinchromosome CDS958825 627 - 0.457735
ycgM SSO_1169 putative isomerasechromosome CDS1248351 660 + 0.518182
yciK SSO_1872 putative oxidoreductasechromosome CDS1971200 759 + 0.527009
ydgB SSO_1554 putative oxidoreductasechromosome CDS1632975 723 - 0.517289
ydjB SSO_1387 conserved hypothetical proteinchromosome CDS1461011 660 - 0.524242
yebH SSO_1338 putative enzymechromosome CDS1412278 810 + 0.511111
yecD SSO_1274 conserved hypothetical proteinchromosome CDS1349015 600 - 0.525
yecO SSO_1250 conserved hypothetical proteinchromosome CDS1326241 744 - 0.502688
yecP SSO_1249 putative enzymechromosome CDS1325273 972 - 0.521605
yeiN SSO_2221 conserved hypothetical proteinchromosome CDS2330191 939 - 0.467519
ygfF SSO_3055 putative oxidoreductasechromosome CDS3214964 744 - 0.544355
yghA SSO_3147 putative oxidoreductasechromosome CDS3306100 885 + 0.546893
yghYX SSO_3144 Predicted hydrolasechromosome CDS3303291 927 - 0.514563
yhbL SSO_3357 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3528880 663 - 0.526395
yhiQ SSO_3732 conserved hypothetical proteinchromosome CDS3913732 753 - 0.586985
yigI SSO_3994 conserved hypothetical proteinchromosome CDS4218323 486 - 0.526749
yjcS SSO_4265 conserved hypothetical proteinchromosome CDS4530044 1998 - 0.51952
yjgI SSO_4429 putative oxidoreductasechromosome CDS4699793 714 - 0.540616
yohF SSO_2194 putative oxidoreductasechromosome CDS2299442 762 - 0.553806
yojI SSO_2269 putative ATP-binding component of a transport systemchromosome CDS2381166 1644 - 0.53528
yrbC SSO_3340 conserved hypothetical proteinchromosome CDS3516330 636 - 0.522013
yrbD SSO_3341 conserved hypothetical proteinchromosome CDS3516984 552 - 0.498188
yrbE SSO_3342 conserved hypothetical proteinchromosome CDS3517540 783 - 0.550447
yrbF SSO_3343 putative ATP-binding component of a transport systemchromosome CDS3518330 810 - 0.545679
ysgA SSO_4005 putative hydrolasechromosome CDS4232801 690 - 0.543478