TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-05 18:03:29

Gene list

Applied filters:

COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Shewanella oneidensis MR-1, MR-1

Number of genes found: 86

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SO0151 conserved hypothetical proteinchromosome CDS159448 768 + 0.483073
SO0180 hypothetical proteinchromosome CDS184305 2010 + 0.479104
SO0357 metallo-beta-lactamase superfamily proteinchromosome CDS365794 1854 + 0.454693
SO0438 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS463857 804 + 0.506219
SO0762 isochorismatase family proteinchromosome CDS776916 543 + 0.475138
SO0772 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS785081 720 + 0.481944
SO0784 hypothetical proteinchromosome CDS799567 411 - 0.493917
SO0789 conserved hypothetical proteinchromosome CDS803222 618 - 0.475728
SO0865 conserved hypothetical proteinchromosome CDS893523 1509 - 0.45063
SO0964 conserved hypothetical proteinchromosome CDS998306 207 - 0.487923
SO0967 dienelactone hydrolase family proteinchromosome CDS999715 519 - 0.499037
SO0972 conserved hypothetical proteinchromosome CDS1004232 534 + 0.451311
SO1006 dienelactone hydrolase family proteinchromosome CDS1040789 963 + 0.521288
SO1068 conserved hypothetical proteinchromosome CDS1108836 438 + 0.484018
SO1100 extracellular solute-binding protein, family 7chromosome CDS1141864 1113 + 0.488769
SO1294 ribosomal RNA large subunit methyltransferase A, putativechromosome CDS1344013 828 + 0.451691
SO1409 conserved hypothetical proteinchromosome CDS1465778 579 - 0.483592
SO1585 fumarylacetoacetate hydrolase family proteinchromosome CDS1661674 627 + 0.467305
SO1599 multi-domain beta-ketoacyl synthasechromosome CDS1670313 5892 - 0.520197
SO1602 multi-domain beta-ketoacyl synthasechromosome CDS1678564 7596 - 0.519616
SO1606 metallo-beta-lactamase superfamily proteinchromosome CDS1689454 1992 - 0.460843
SO1670 fumarylacetoacetate hydrolase family proteinchromosome CDS1756837 987 + 0.487335
SO1683 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS1770317 759 + 0.496706
SO1744 AMP-binding proteinchromosome CDS1823773 1845 + 0.496477
SO1815 histone deacetylase/AcuC/AphA family proteinchromosome CDS1904744 915 - 0.461202
SO1873 conserved hypothetical proteinchromosome CDS1970320 606 - 0.405941
SO1911 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2009613 864 + 0.46875
SO1963 conserved hypothetical proteinchromosome CDS2068671 1161 - 0.475452
SO1971 AMP-binding family proteinchromosome CDS2075392 1737 + 0.466897
SO1988 conserved hypothetical proteinchromosome CDS2090538 615 + 0.461789
SO2397 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS2501539 828 - 0.493961
SO2435 methyltransferase, putativechromosome CDS2546487 732 + 0.459016
SO2436 methyltransferase, putativechromosome CDS2547215 993 + 0.455186
SO2460 hypothetical proteinchromosome CDS2578794 1185 + 0.424473
SO2562 conserved hypothetical proteinchromosome CDS2691603 735 - 0.472109
SO2721 conserved hypothetical proteinchromosome CDS2838879 480 - 0.458333
SO2722 conserved hypothetical proteinchromosome CDS2839345 528 - 0.469697
SO2813 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2934468 765 - 0.494118
SO2876 hypothetical proteinchromosome CDS2995390 1953 + 0.491551
SO2905 O-methyltransferase, putativechromosome CDS3031935 1074 + 0.463687
SO2926 ABC transporter, permease, putativechromosome CDS3057041 2508 - 0.504785
SO2927 ABC transporter, ATP-binding proteinchromosome CDS3059552 762 - 0.494751
SO2935 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3071808 738 + 0.482385
SO3032 siderophore biosynthesis protein, putativechromosome CDS3142234 1806 + 0.482835
SO3085 conserved domain proteinchromosome CDS3209410 579 + 0.43696
SO3148 conserved hypothetical proteinchromosome CDS3285131 1275 + 0.509804
SO3149 conserved hypothetical proteinchromosome CDS3286405 1287 + 0.487179
SO3263 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS3399505 768 + 0.445312
SO3264 hypothetical proteinchromosome CDS3400292 1188 + 0.43771
SO3266 conserved domain proteinchromosome CDS3402738 1203 - 0.373234
SO3267 conserved domain proteinchromosome CDS3403961 912 - 0.41557
SO3382 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3520699 801 - 0.454432
SO3402 hypothetical proteinchromosome CDS3541225 129 - 0.449612
SO3951 conserved hypothetical proteinchromosome CDS4095270 654 - 0.446483
SO3952 mce-related proteinchromosome CDS4095935 474 - 0.434599
SO3953 conserved hypothetical protein TIGR00056chromosome CDS4096465 786 - 0.506361
SO3954 ABC transporter, ATP-binding protein, putativechromosome CDS4097247 819 - 0.499389
SO4042 hydratase/decarboxylase family proteinchromosome CDS4195819 825 + 0.489697
SO4069 conserved hypothetical proteinchromosome CDS4224037 786 - 0.438931
SO4143 conserved hypothetical proteinchromosome CDS4299367 1725 + 0.482899
SO4170 C-factor, putativechromosome CDS4343403 711 + 0.464135
SO4242 conserved hypothetical proteinchromosome CDS4420864 465 + 0.490323
SO4368 acyl carrier protein, putativechromosome CDS4563328 255 + 0.427451
SO4369 acyl carrier protein, putativechromosome CDS4563592 249 + 0.441767
SO4380 3-oxoacyl-(acyl-carrier-protein) synthase II, putativechromosome CDS4575430 1218 + 0.536946
SO4462 hypothetical proteinchromosome CDS4650037 396 - 0.45202
SO4479 sigma-54 dependent transcriptional regulatorchromosome CDS4667254 1851 - 0.507293
SO4576 O-succinylbenzoic acid--CoA ligase, putativechromosome CDS4770745 1395 + 0.488889
SO4590 isochorismatase family proteinchromosome CDS4784767 534 + 0.468165
SO4658 conserved hypothetical proteinchromosome CDS4857581 588 - 0.539116
SO4713 menaquinone-specific isochorismate synthase, putativechromosome CDS4916550 1359 + 0.476085
acpP acyl carrier proteinchromosome CDS2897778 234 - 0.42735
alcA siderophore biosynthesis proteinchromosome CDS3140006 1497 + 0.460922
bioC biotin synthesis protein BioCchromosome CDS2853336 828 - 0.4843
elbB enhancing lycopene biosynthesis proteinchromosome CDS4868974 657 + 0.455099
fabB 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS3191404 1212 - 0.475248
fabF-1 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS2896330 1239 - 0.497982
fabF-2 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS4578026 1263 + 0.534442
fabG-1 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS2898175 747 - 0.45917
fabG-2 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS4577300 726 + 0.526171
fadD-1 long-chain-fatty-acid--CoA ligasechromosome CDS2707886 1674 - 0.454002
fadD-2 long-chain-fatty-acid--CoA ligasechromosome CDS3816560 1599 + 0.459037
hutI imidazolonepropionasechromosome CDS102534 1227 - 0.507742
rrmA ribosomal RNA large subunit methyltransferase Achromosome CDS2910366 816 - 0.435049
smtA smtA proteinchromosome CDS578052 783 - 0.476373
tpm thiopurine S-methyltransferasechromosome CDS608019 657 + 0.468798