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2024-04-28 01:37:17

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Escherichia coli W3110, K-12

Number of genes found: 82

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
acpP acyl carrier proteinchromosome CDS1153192 237 + 0.481013
bioC predicted methltransferase, enzyme of biotin synthesischromosome CDS811944 756 + 0.564815
caiC predicted crotonobetaine CoA ligase:carnitine CoA ligasechromosome CDS36271 1569 - 0.509879
cchB predicted carboxysome structural protein, ethanolamine utilization proteinchromosome CDS2570419 288 - 0.53125
ccmA heme exporter subunitchromosome CDS2300355 624 - 0.559295
cueO multicopper oxidase (laccase)chromosome CDS137083 1551 + 0.546744
dhaR predicted DNA-binding transcriptional regulator, dihydroxyacetonechromosome CDS1252643 1920 + 0.514583
elbB isoprenoid biosynthesis protein with amidotransferase-like domainchromosome CDS3349661 654 - 0.527523
entA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS627774 747 + 0.579652
entB isochorismatasechromosome CDS626917 858 + 0.553613
entC isochorismate synthase 1chromosome CDS624108 1176 + 0.564626
entD phosphopantetheinyltransferase component of enterobactin synthase multienzyme complexchromosome CDS608682 630 - 0.474603
entE 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complexchromosome CDS625293 1611 + 0.560521
entF enterobactin synthase multienzyme complex component, ATP-dependentchromosome CDS613380 3882 + 0.56543
fabB 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2445831 1221 - 0.56593
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1153516 1242 + 0.533011
fabG 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1152247 735 + 0.515646
fadD acyl-CoA synthetasechromosome CDS1889775 1686 - 0.511862
folM dihydrofolate reductase isozymechromosome CDS1682690 723 + 0.50899
hcaB 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genasechromosome CDS2669881 813 + 0.560886
hcaF 3-phenylpropionate dioxygenase, small (beta) subunitchromosome CDS2669046 519 + 0.522158
hdhA 7alpha-hydroxysteroid dehydrogenase, NAD-dependentchromosome CDS1698987 768 - 0.472656
idnO 5-keto-D-gluconate-5-reductasechromosome CDS4497267 765 - 0.494118
kduD 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2981153 762 - 0.519685
macA macrolide transporter subunit, membrane fusion protein (MFP) componentchromosome CDS919657 1116 + 0.530466
mdtA multidrug efflux system, subunit Achromosome CDS2156153 1248 + 0.552885
menE o-succinylbenzoate-CoA ligasechromosome CDS2378318 1356 - 0.560472
menF isochorismate synthase 2chromosome CDS2384018 1296 - 0.533951
mhpD 2-keto-4-pentenoate hydratasechromosome CDS371339 810 + 0.551852
mhpF acetaldehyde-CoA dehydrogenase II, NAD-bindingchromosome CDS372145 951 + 0.54469
nhoA N-hydroxyarylamine O-acetyltransferasechromosome CDS1535738 846 + 0.514184
paaB predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradationchromosome CDS1456582 288 + 0.496528
paaI predicted thioesterasechromosome CDS1462185 423 + 0.515366
pncA nicotinamidase/pyrazinamidasechromosome CDS1853601 642 + 0.531153
rrmA 23S rRNA m1G745 methyltransferasechromosome CDS1907965 810 - 0.51358
smtA S-adenosylmethionine-dependentmethyltransferasechromosome CDS973959 786 + 0.515267
srlD sorbitol-6-phosphate dehydrogenasechromosome CDS2826393 780 + 0.533333
sufI repressor protein for FtsIchromosome CDS3159913 1413 - 0.564048
tauD taurine dioxygenase, 2-oxoglutarate-dependentchromosome CDS387019 852 + 0.544601
tehB predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS1503276 594 + 0.459596
tynA tyramine oxidase, copper-requiringchromosome CDS1450790 2274 - 0.506157
ucpA predicted oxidoredutase, sulfate metabolism proteinchromosome CDS2549278 792 - 0.55303
yafE predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS231926 624 + 0.490385
yafS predicted S-adenosyl-L-methionine-dependent methyltransferasechromosome CDS234816 723 + 0.493776
ybbA predicted transporter subunitchromosome CDS518957 687 + 0.56623
ybbO predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS517564 810 - 0.54321
ybbP predicted inner membrane proteinchromosome CDS519640 2415 + 0.575983
ybcY predicted SAM-dependent methyltransferasechromosome CDS581375 585 - 0.415385
ybdB conserved hypothetical proteinchromosome CDS628523 414 + 0.567633
ybhF fused predicted transporter subunits and ATP-binding components of ABC superfamilychromosome CDS827667 1737 - 0.555556
ycaC predicted hydrolasechromosome CDS945353 627 - 0.46252
ycdL hypothetical proteinchromosome CDS1072593 693 - 0.554113
ycgM predicted isomerase/hydrolasechromosome CDS1229656 660 + 0.519697
yciK predicted oxoacyl-(acyl carrier protein) reductase, EmrKY-TolC systemchromosome CDS1330068 759 - 0.524374
ydcO predicted benzoate transporterchromosome CDS1506619 1176 - 0.529762
ydhJ undecaprenyl pyrophosphate phosphatasechromosome CDS1722978 858 + 0.502331
ydiD short chain acyl-CoA synthetase, anaerobicchromosome CDS1784691 1701 + 0.49853
ydiI conserved hypothetical proteinchromosome CDS1766936 411 - 0.515815
yecD predicted hydrolasechromosome CDS1952546 567 + 0.530864
yecO predicted methyltransferasechromosome CDS1954416 744 + 0.50672
yecP predicted methyltransferasechromosome CDS1955156 972 + 0.520576
yeiN conserved hypothetical proteinchromosome CDS2260763 939 - 0.497338
yfiC predicted methyltransferasechromosome CDS2710683 738 - 0.52439
ygcW predicted deoxygluconate dehydrogenasechromosome CDS2898144 786 - 0.456743
ygfF predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS3043814 744 - 0.549731
yghA predicted glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domainchromosome CDS3148318 885 + 0.543503
yghX chromosome pseudo3145512 411 - 0.520681
yhiQ predicted SAM-dependent methyltransferasechromosome CDS3997283 753 + 0.581673
yigI conserved hypothetical proteinchromosome CDS3631984 468 + 0.532051
yjcS predicted alkyl sulfatasechromosome CDS4308091 1986 - 0.529204
yjgI predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS4478020 714 - 0.543417
yjhP predicted methyltransferasechromosome CDS4537117 747 - 0.595716
ymfD predicted SAM-dependent methyltransferasechromosome CDS1198444 666 - 0.348348
ynbC predicted hydrolasechromosome CDS1480852 1758 + 0.509101
yohF predicted oxidoreductase with NAD(P)-binding Rossmann-fold domainchromosome CDS2229843 762 - 0.551181
yojI fused predicted multidrug transport subunits and membrane component and ATP-binding component of ABC superfamilychromosome CDS2310306 1644 - 0.534063
ypjA adhesin-like autotransporterchromosome CDS2776802 4581 - 0.492032
yrbC predicted ABC-type organic solvent transporterchromosome CDS3337111 636 - 0.523585
yrbD predicted ABC-type organic solvent transporterchromosome CDS3337765 552 - 0.498188
yrbE predicted toluene transporter subunitchromosome CDS3338321 783 - 0.551724
yrbF predicted toluene transporter subunitchromosome CDS3339111 810 - 0.545679
ysgA predicted hydrolasechromosome CDS3620512 816 + 0.545343