Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Bordetella avium 197N, 197N
Number of genes found: 124
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Bordetella avium 197N, 197N | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BAV2114 | hypothetical protein | chromosome | CDS | 2260396 | 1353 | - | 0.583149 |
NA | BAV3386 | putative cyclohexanol dehydrogenase (short-chain dehydrogenase/reductase) | chromosome | CDS | 3679297 | 759 | + | 0.638999 |
NA | BAV3020 | 2-aminobenzoate-CoA ligase | chromosome | CDS | 3282899 | 1653 | - | 0.622505 |
NA | BAV1363 | histone deacetylase family protein | chromosome | CDS | 1434565 | 915 | + | 0.598907 |
NA | BAV2741 | putative isochorismatase-family hydrolase | chromosome | CDS | 2969508 | 627 | - | 0.637959 |
NA | BAV0656 | Putative dioxygenase | chromosome | CDS | 682161 | 1101 | + | 0.622162 |
NA | BAV2076 | putative short-chain dehydrogenase | chromosome | CDS | 2216395 | 783 | - | 0.652618 |
NA | BAV2935 | conserved hypothetical protein | chromosome | CDS | 3193282 | 759 | - | 0.633729 |
NA | BAV2461 | multidrug efflux system transmembrane protein | chromosome | CDS | 2655312 | 3225 | - | 0.606512 |
NA | BAV0222 | putative fatty acid CoA ligase | chromosome | CDS | 228395 | 1575 | - | 0.650159 |
NA | BAV1010 | putative HlyD-family component of efflux pump | chromosome | CDS | 1082440 | 1053 | - | 0.654321 |
NA | BAV1944 | putative secreted calcium-binding protein | chromosome | CDS | 2045961 | 13029 | - | 0.624914 |
NA | BAV3043 | multidrug efflux system inner membrane protein | chromosome | CDS | 3312038 | 1236 | - | 0.626214 |
NA | BAV2856 | conserved hypothetical protein | chromosome | CDS | 3104034 | 1845 | - | 0.678591 |
NA | BAV0622 | probable short-chain dehydrogenase/reductase | chromosome | CDS | 642952 | 720 | - | 0.702778 |
NA | BAV2958 | isochorismatase-family hydrolase | chromosome | CDS | 3215558 | 555 | + | 0.628829 |
NA | BAV2933 | multidrug efflux system inner membrane protein | chromosome | CDS | 3191552 | 1068 | - | 0.63764 |
NA | BAV0654 | Putative hydrolase | chromosome | CDS | 680253 | 855 | + | 0.661988 |
NA | BAV2519 | probable short-chain dehydrogenase/reductase | chromosome | CDS | 2726679 | 735 | + | 0.613605 |
NA | BAV1954 | putative oxidoreductase | chromosome | CDS | 2088401 | 771 | - | 0.629053 |
NA | BAV0325 | multidrug efflux system transmembrane protein | chromosome | CDS | 338340 | 3183 | - | 0.621741 |
NA | BAV3083 | putative short-chain dehydrogenase/reductase | chromosome | CDS | 3356691 | 666 | - | 0.581081 |
NA | BAV0955 | putative isochorismatase hydrolase | chromosome | CDS | 1026080 | 633 | + | 0.693523 |
NA | BAV2295 | putative hydrolase | chromosome | CDS | 2475831 | 696 | - | 0.590517 |
NA | BAV2224 | conserved hypothetical protein | chromosome | CDS | 2388483 | 1557 | + | 0.59088 |
NA | BAV3082 | putative short-chain dehydrogenase/reductase | chromosome | CDS | 3355975 | 720 | - | 0.543056 |
NA | BAV1813 | putative HlyD-family secretion protein | chromosome | CDS | 1902291 | 1065 | + | 0.658216 |
NA | BAV2035 | thioesterase-related protein | chromosome | CDS | 2179579 | 411 | + | 0.632603 |
NA | BAV1871 | putative hydratase | chromosome | CDS | 1964731 | 780 | + | 0.629487 |
NA | BAV1943 | putative signal transduction protein | chromosome | CDS | 2044145 | 1824 | - | 0.646382 |
NA | BAV2415 | probable short-chain dehydrogenase/reductase | chromosome | CDS | 2606327 | 717 | - | 0.623431 |
NA | BAV1234 | ABC transporter, permease and ATP-binding protein | chromosome | CDS | 1329478 | 2283 | + | 0.603154 |
NA | BAV0684 | putative short chain dehydrogenase | chromosome | CDS | 707641 | 786 | + | 0.660305 |
NA | BAV0788 | conserved hypothetical protein | chromosome | CDS | 825287 | 963 | - | 0.650052 |
NA | BAV1013 | Putative X-Pro dipeptidase | chromosome | CDS | 1084732 | 1470 | + | 0.630612 |
NA | BAV1528 | probable hydrolase | chromosome | CDS | 1581292 | 687 | - | 0.663755 |
NA | BAV0608 | short-chain dehydrogenase | chromosome | CDS | 630522 | 915 | + | 0.629508 |
NA | BAV0555 | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | chromosome | CDS | 579418 | 849 | + | 0.650177 |
NA | BAV3065 | putative methyltransferase | chromosome | CDS | 3336256 | 765 | + | 0.664052 |
NA | BAV3042 | multidrug efflux system transmembrane protein | chromosome | CDS | 3308945 | 3087 | - | 0.617752 |
NA | BAV0808 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 849430 | 705 | - | 0.646809 |
NA | BAV0235 | conserved hypothetical protein | chromosome | CDS | 244156 | 930 | - | 0.662366 |
NA | BAV0040 | probable short-chain dehydrogenase/reductase | chromosome | CDS | 41592 | 729 | + | 0.528121 |
NA | BAV2462 | multidrug efflux system inner membrane protein | chromosome | CDS | 2658597 | 1185 | - | 0.609283 |
NA | BAV0621 | probable short chain dehydrogenase/reductase | chromosome | CDS | 642188 | 768 | - | 0.682292 |
NA | BAV3256 | putative chorismatase hydrolase | chromosome | CDS | 3537325 | 609 | - | 0.600985 |
NA | BAV2024 | multidrug resistance protein | chromosome | CDS | 2166168 | 891 | + | 0.634119 |
NA | BAV0224 | probable short-chain dehydrogenase/reductase | chromosome | CDS | 231039 | 699 | - | 0.656652 |
NA | BAV3309 | ABC transporter, ATP-binding protein | chromosome | CDS | 3599814 | 810 | + | 0.634568 |
NA | BAV3257 | putative N-acylmannosamine 1-dehydrogenase (short-chain dehydrogenase/reductase) | chromosome | CDS | 3537976 | 762 | - | 0.625984 |
NA | BAV1915 | probable dioxygenase | chromosome | CDS | 2008963 | 1122 | - | 0.590909 |
NA | BAV2972 | hypothetical protein | chromosome | CDS | 3228691 | 1239 | - | 0.5682 |
NA | BAV0755 | ABC transporter, ATP-binding protein | chromosome | CDS | 791843 | 1815 | + | 0.631956 |
NA | BAV1814 | ABC transporter ATP-binding protein | chromosome | CDS | 1903355 | 2721 | + | 0.626975 |
NA | BAV0494 | hypothetical protein | chromosome | CDS | 505172 | 825 | - | 0.610909 |
NA | BAV2104 | 3-hydroxyacyl-CoA dehydrogenase | chromosome | CDS | 2250884 | 759 | + | 0.635046 |
NA | BAV1518 | probable short chain dehydrogenase | chromosome | CDS | 1570394 | 750 | - | 0.664 |
NA | BAV3151 | isomerase | chromosome | CDS | 3428593 | 627 | + | 0.626794 |
NA | BAV1039 | putative thioesterase | chromosome | CDS | 1111728 | 423 | - | 0.685579 |
NA | BAV1284 | Putative phage methyltransferase | chromosome | CDS | 1374440 | 501 | - | 0.620758 |
NA | BAV2932 | multidrug efflux system transmembrane protein | chromosome | CDS | 3188472 | 3066 | - | 0.585127 |
NA | BAV1945 | putative adhesin | chromosome | CDS | 2059011 | 19383 | - | 0.639065 |
NA | BAV0627 | putative isochorismatase hydrolase | chromosome | CDS | 649716 | 729 | + | 0.617284 |
NA | BAV3041 | multidrug efflux system transmembrane protein | chromosome | CDS | 3305838 | 3111 | - | 0.616843 |
NA | BAV0036 | putative dioxygenase | chromosome | CDS | 38013 | 849 | + | 0.534747 |
NA | BAV1666 | conserved hypothetical protein | chromosome | CDS | 1752193 | 1365 | + | 0.601465 |
NA | BAV1940 | putative HlyD-family secretion protein | chromosome | CDS | 2039207 | 786 | - | 0.632316 |
NA | BAV1616 | putative hydratase | chromosome | CDS | 1689882 | 789 | - | 0.653992 |
NA | BAV0642 | probable short chain dehydrogenase/reductase | chromosome | CDS | 668074 | 780 | - | 0.660256 |
NA | BAV0614 | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | chromosome | CDS | 637054 | 855 | + | 0.649123 |
NA | BAV3085 | acyl carrier protein | chromosome | CDS | 3358455 | 258 | - | 0.48062 |
NA | BAV2422 | N-acyl-D-glutamate deacylase | chromosome | CDS | 2612542 | 1449 | - | 0.654934 |
NA | BAV0718 | isochorismatase-family hydrolase | chromosome | CDS | 752017 | 597 | - | 0.651591 |
NA | BAV0310 | putative acetoacetyl-CoA reductase (short-chain dehydrogenase/reductase) | chromosome | CDS | 321109 | 726 | - | 0.665289 |
NA | BAV0488 | probable short-chain dehydrogenase/reductase | chromosome | CDS | 497332 | 768 | + | 0.675781 |
NA | BAV0212 | probable short chain dehydrogenase/reductase | chromosome | CDS | 218522 | 750 | + | 0.652 |
NA | BAV0326 | HlyD-family secretion protein | chromosome | CDS | 341543 | 1188 | - | 0.671717 |
NA | BAV0978 | putative substrate-CoA ligase | chromosome | CDS | 1049202 | 1521 | - | 0.631164 |
NA | BAV2991 | acyl carrier protein | chromosome | CDS | 3257474 | 237 | - | 0.535865 |
NA | BAV3023 | D-beta-hydroxybutyrate dehydrogenase (short chain dehydrogenase/reductase) | chromosome | CDS | 3286613 | 789 | - | 0.667934 |
NA | BAV2792 | putative isochorismatase hydrolase | chromosome | CDS | 3020419 | 528 | - | 0.626894 |
acpP | BAV1122 | acyl carrier protein | chromosome | CDS | 1198657 | 240 | + | 0.5375 |
acrA | BAV1653 | acriflavine resistance protein A | chromosome | CDS | 1731957 | 1191 | + | 0.628044 |
acrB | BAV1654 | acriflavine resistance protein B (multidrug efflux system transmembrane protein) | chromosome | CDS | 1733160 | 3168 | + | 0.597538 |
aphA1 | BAV2201 | acetylpolyamine aminohydrolase | chromosome | CDS | 2365103 | 1065 | + | 0.633803 |
aphA2 | BAV2226 | acetylpolyamine aminohydrolase | chromosome | CDS | 2391658 | 1020 | + | 0.603922 |
bdhA | BAV0263 | putative D-beta-hydroxybutyrate dehydrogenase | chromosome | CDS | 271008 | 786 | - | 0.603053 |
benE | BAV1501 | benzoate membrane transport protein | chromosome | CDS | 1553811 | 1245 | + | 0.6249 |
benE | BAV0561 | putative benzoate transport protein | chromosome | CDS | 585713 | 1206 | - | 0.678275 |
bphE | BAV0598 | 2-keto-4-pentenoate hydratase | chromosome | CDS | 620993 | 801 | + | 0.64794 |
clcD | BAV2386 | putative carboxymethylenebutenolidase | chromosome | CDS | 2574949 | 792 | - | 0.628788 |
cydC | BAV3107 | ABC transporter, ATP-binding protein | chromosome | CDS | 3381003 | 1650 | - | 0.664849 |
cydD | BAV3108 | ABC transporter, ATP-binding protein | chromosome | CDS | 3382654 | 1740 | - | 0.668391 |
dan | BAV0959 | D-aminoacylase | chromosome | CDS | 1030293 | 1449 | - | 0.611456 |
dltA | BAV2987 | putative D-alanine-D-alanyl carrier protein ligase | chromosome | CDS | 3253611 | 1437 | - | 0.617258 |
dmpA | BAV1162 | D-aminopeptidase | chromosome | CDS | 1240394 | 1119 | + | 0.626452 |
emrA | BAV2191 | multidrug resistance protein A | chromosome | CDS | 2352468 | 1188 | + | 0.638047 |
fabF | BAV1123 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1199071 | 1230 | + | 0.591057 |
fabF | BAV1771 | 3-oxoacyl-[acyl-carrier-protein] synthase | chromosome | CDS | 1858090 | 1212 | - | 0.636139 |
fabG | BAV1121 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 1197688 | 753 | + | 0.614874 |
fadD | BAV2858 | long-chain-fatty-acid--CoA ligase | chromosome | CDS | 3106871 | 1686 | - | 0.623962 |
fah | BAV0527 | fumarylacetoacetase | chromosome | CDS | 547781 | 1314 | - | 0.659056 |
hbdH | BAV2676 | D-beta-hydroxybutyrate dehydrogenase | chromosome | CDS | 2895813 | 783 | - | 0.641124 |
hmgA | BAV0528 | homogentisate 1,2-dioxygenase | chromosome | CDS | 549148 | 1299 | - | 0.632794 |
hndI | BAV2445 | ABC transporter, ATP-binding protein | chromosome | CDS | 2634401 | 933 | - | 0.59164 |
hpaG | BAV1265 | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | chromosome | CDS | 1358066 | 807 | - | 0.600991 |
hpaG' | BAV1264 | putative 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase | chromosome | CDS | 1357269 | 801 | - | 0.579276 |
hpaH | BAV1262 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 1356049 | 804 | - | 0.583333 |
hpaH | BAV0662 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 687073 | 807 | + | 0.636927 |
idnO | BAV3384 | gluconate 5-dehydrogenase (short-chain dehydrogenase/reductase) | chromosome | CDS | 3677034 | 801 | + | 0.669164 |
maiA1 | BAV1531 | maleate cis-trans isomerase | chromosome | CDS | 1583905 | 774 | - | 0.631783 |
maiA2 | BAV2744 | maleate cis-trans isomerase | chromosome | CDS | 2972042 | 753 | - | 0.614874 |
metW | BAV3186 | putative methionine biosynthesis protein | chromosome | CDS | 3461806 | 612 | - | 0.612745 |
msbA | BAV2229 | lipid A export ABC transporter,ATP-binding/permease protein | chromosome | CDS | 2402263 | 1776 | - | 0.609234 |
nagI | BAV1782 | gentisate 1,2-dioxygenase | chromosome | CDS | 1872542 | 1050 | + | 0.63619 |
nagK | BAV1783 | fumarylpyruvate hydrolase | chromosome | CDS | 1873647 | 702 | + | 0.621083 |
norM | BAV2410 | multidrug resistance protein | chromosome | CDS | 2601538 | 1392 | + | 0.633621 |
paaB | BAV1381 | phenylacetic acid degradation protein | chromosome | CDS | 1452566 | 285 | + | 0.575439 |
paaI | BAV1387 | phenylacetic acid degradation protein | chromosome | CDS | 1457738 | 465 | + | 0.604301 |
phbB | BAV1222 | acetoacetyl-CoA reductase (short-chain dehydrogenase/reductase) | chromosome | CDS | 1316655 | 738 | + | 0.582656 |
phnG | BAV0613 | 1-hydroxy-2-naphthoate dioxygenase | chromosome | CDS | 636029 | 1014 | + | 0.655819 |
pncA | BAV2136 | pyrazinamidase/nicotinamidase | chromosome | CDS | 2287076 | 642 | - | 0.582555 |
tam | BAV0687 | trans-aconitate 2-methyltransferase | chromosome | CDS | 709931 | 774 | + | 0.667959 |
tpm | BAV1018 | thiopurine S-methyltransferase | chromosome | CDS | 1090950 | 654 | + | 0.619266 |