Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Xanthomonas campestris pv. vesicatoria, 85-10
Number of genes found: 101
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| Xanthomonas campestris pv. vesicatoria, 85-10 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | XCV3696 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 4270845 | 843 | + | 0.67497 |
| NA | XCV0128 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 151912 | 702 | + | 0.55698 |
| NA | XCV0575 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 649887 | 2184 | + | 0.671245 |
| NA | XCV0715 | sigma-54-dependent transcriptional regulator | SubName: Full=Sigma-54-dependent transcriptional regulator; | chromosome | CDS | 812005 | 1986 | - | 0.694864 |
| NA | XCV3780 | putative secreted protein | SubName: Full=Putative secreted protein; Flags: Precursor; | chromosome | CDS | 4364784 | 765 | - | 0.678431 |
| NA | XCV2825 | short chain dehydrogenase precursor | SubName: Full=Short chain dehydrogenase; Flags: Precursor; | chromosome | CDS | 3215925 | 744 | - | 0.700269 |
| NA | XCV1896 | 3-hydroxyacyl-CoA dehydrogenase | SubName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; Flags: Precursor; | chromosome | CDS | 2143559 | 771 | - | 0.670558 |
| NA | XCV0748 | pteridine reductase | SubName: Full=Pteridine reductase; EC=1.5.1.33; | chromosome | CDS | 852276 | 738 | - | 0.685637 |
| NA | XCV1088 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1224116 | 657 | + | 0.707763 |
| NA | XCV4452 | ABC transporter substrate-binding protein | SubName: Full=ABC transporter substrate-binding protein; Flags: Precursor; | chromosome | CDS | 5136114 | 546 | + | 0.655678 |
| NA | XCV4434 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 5108616 | 741 | + | 0.668016 |
| NA | XCV2897 | Phytoene dehydrogenase | SubName: Full=Phytoene dehydrogenase; | chromosome | CDS | 3294423 | 1620 | - | 0.653086 |
| NA | XCVd0030 | putative secreted protein | SubName: Full=Putative secreted protein; Flags: Precursor; | pXCV183 | CDS | 36182 | 1137 | + | 0.586631 |
| NA | XCV3423 | fumarylacetoacetate hydrolase family protein | SubName: Full=Fumarylacetoacetate hydrolase family protein; | chromosome | CDS | 3908849 | 714 | + | 0.658263 |
| NA | XCV0884 | ABC transporter permease | SubName: Full=ABC transporter permease; | chromosome | CDS | 1014050 | 2484 | - | 0.689614 |
| NA | XCV0243 | AMP-binding protein | SubName: Full=AMP-binding protein; | chromosome | CDS | 283462 | 1662 | + | 0.68231 |
| NA | XCV0399 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 452395 | 783 | - | 0.696041 |
| NA | XCV0366 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 418086 | 768 | + | 0.64974 |
| NA | XCV3797 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 4382360 | 807 | + | 0.697646 |
| NA | XCV2150 | cytochrome P-450 | SubName: Full=Cytochrome P-450; | chromosome | CDS | 2468942 | 1419 | + | 0.62086 |
| NA | XCV0467 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 529382 | 807 | + | 0.667906 |
| NA | XCV0146 | putative 2-keto-4-pentenoate hydratase | SubName: Full=Putative 2-keto-4-pentenoate hydratase; | chromosome | CDS | 175150 | 822 | + | 0.661801 |
| NA | XCV0059 | short chain oxidoreductase precursor | SubName: Full=Short chain oxidoreductase; Flags: Precursor; | chromosome | CDS | 70546 | 900 | - | 0.688889 |
| NA | XCV3697 | ABC transporter substrate-binding protein | SubName: Full=ABC transporter substrate-binding protein; Flags: Precursor; | chromosome | CDS | 4271690 | 927 | + | 0.650485 |
| NA | XCV4450 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 5134559 | 795 | + | 0.698113 |
| NA | XCV0536 | putative secreted lipase | SubName: Full=Putative secreted lipase; Flags: Precursor; | chromosome | CDS | 600751 | 1263 | + | 0.62312 |
| NA | XCV2190 | putative hydrolase | SubName: Full=Putative hydrolase; | chromosome | CDS | 2519783 | 657 | + | 0.61035 |
| NA | XCV2012 | putative acyl carrier protein | SubName: Full=Putative acyl carrier protein; | chromosome | CDS | 2293975 | 225 | - | 0.582222 |
| NA | XCV0179 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 215180 | 429 | + | 0.655012 |
| NA | XCV0549 | putative esterase/lipase/thioesterase family protein | SubName: Full=Putative esterase/lipase/thioesterase family protein; | chromosome | CDS | 616771 | 1761 | + | 0.673481 |
| NA | XCV2911 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3312040 | 837 | - | 0.653525 |
| NA | XCV0459 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 519382 | 759 | - | 0.649539 |
| NA | XCV2010 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 2292165 | 708 | - | 0.658192 |
| NA | XCV2181 | cytochrome P-450 | SubName: Full=Cytochrome P-450; | chromosome | CDS | 2508298 | 1182 | - | 0.643824 |
| NA | XCV3308 | putative siderophore biosynthesis protein | SubName: Full=Putative siderophore biosynthesis protein; | chromosome | CDS | 3784332 | 1833 | + | 0.67976 |
| NA | XCV1542 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; Flags: Precursor; | chromosome | CDS | 1741798 | 732 | + | 0.632514 |
| NA | XCV1204 | putative short chain dehydrogenase | SubName: Full=Putative short chain dehydrogenase; | chromosome | CDS | 1347120 | 903 | - | 0.619048 |
| NA | XCV4284 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 4918102 | 771 | + | 0.664073 |
| NA | XCV4451 | ABC transporter permease | SubName: Full=ABC transporter permease; | chromosome | CDS | 5135353 | 750 | + | 0.652 |
| NA | XCV3858 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 4442402 | 867 | + | 0.629758 |
| NA | XCV2172 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 2497903 | 780 | - | 0.655128 |
| NA | XCV0084 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 97266 | 651 | + | 0.668203 |
| NA | XCV4036 | putative non-ribosomal peptide synthetase | SubName: Full=Putative non-ribosomal peptide synthetase; | chromosome | CDS | 4634864 | 2208 | - | 0.643569 |
| NA | XCV0885 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 1016530 | 606 | - | 0.70462 |
| NA | XCV3310 | putative siderophore biosynthesis protein | SubName: Full=Putative siderophore biosynthesis protein; | chromosome | CDS | 3787335 | 1770 | + | 0.673446 |
| NA | XCV1539 | short chain dehydrogenase, putative | SubName: Full=Short chain dehydrogenase, putative; Flags: Precursor; | chromosome | CDS | 1736217 | 996 | + | 0.690763 |
| NA | XCV0635 | putative oxidoreductase | SubName: Full=Putative oxidoreductase; | chromosome | CDS | 715551 | 1566 | - | 0.644955 |
| NA | XCV2005 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2287668 | 1230 | - | 0.571545 |
| NA | XCV1181 | putative short chain dehydrogenase | SubName: Full=Putative short chain dehydrogenase; | chromosome | CDS | 1321194 | 714 | - | 0.676471 |
| NA | XCV2009 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 2291389 | 762 | - | 0.625984 |
| NA | XCV1729 | SAM-dependent methyltransferase | SubName: Full=SAM-dependent methyltransferase; | chromosome | CDS | 1947844 | 843 | + | 0.667853 |
| NA | XCV3897 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 4481607 | 783 | + | 0.63857 |
| NA | XCV0855 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 974417 | 783 | + | 0.662835 |
| NA | XCV1383 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1563154 | 729 | + | 0.665295 |
| NA | XCV0904 | histone deacetylase family protein | SubName: Full=Histone deacetylase family protein; | chromosome | CDS | 1034133 | 909 | - | 0.685369 |
| NA | XCV1206 | putative short chain dehydrogenase | SubName: Full=Putative short chain dehydrogenase; | chromosome | CDS | 1351222 | 981 | - | 0.654434 |
| NA | XCV4035 | putative non-ribosomal peptide synthetase | SubName: Full=Putative non-ribosomal peptide synthetase; | chromosome | CDS | 4633071 | 1788 | - | 0.673378 |
| NA | XCV1836 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2073799 | 774 | - | 0.664083 |
| NA | XCV1458 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1638749 | 603 | - | 0.678275 |
| NA | XCV3624 | putative methyltransferase | SubName: Full=Putative methyltransferase; | chromosome | CDS | 4170284 | 696 | + | 0.672414 |
| NA | XCV3546 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 4062448 | 816 | - | 0.659314 |
| NA | XCV2087 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 2378392 | 933 | - | 0.690247 |
| NA | XCV2002 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2284654 | 753 | - | 0.571049 |
| NA | XCV4189 | xanthomonadin biosynthesis acyl carrier protein | SubName: Full=Xanthomonadin biosynthesis acyl carrier protein; | chromosome | CDS | 4798962 | 348 | - | 0.614943 |
| NA | XCV0916 | Acid-CoA ligase | SubName: Full=Acid-CoA ligase; | chromosome | CDS | 1045099 | 1479 | - | 0.655849 |
| NA | XCV3051 | putative carboxymethylenebutenolidase | SubName: Full=Putative carboxymethylenebutenolidase; EC=3.1.1.45; Flags: Precursor; | chromosome | CDS | 3475333 | 861 | - | 0.665505 |
| NA | XCV0867 | methyltransferase | SubName: Full=Methyltransferase; | chromosome | CDS | 995990 | 828 | - | 0.647343 |
| NA | XCV4453 | periplasmic ABC-type transport system auxiliary component | SubName: Full=Periplasmic ABC-type transport system auxiliary component; Flags: Precursor; | chromosome | CDS | 5136656 | 663 | + | 0.662142 |
| NA | XCV0060 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 71505 | 738 | - | 0.662602 |
| NA | XCV2888 | putative dienelactone hydrolase | SubName: Full=Putative dienelactone hydrolase; | chromosome | CDS | 3284148 | 663 | + | 0.680241 |
| NA | XCV4285 | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | SubName: Full=2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; | chromosome | CDS | 4919042 | 858 | + | 0.65035 |
| NA | XCV0111 | putative lignostilbene-alpha,beta-dioxygenase | SubName: Full=Putative lignostilbene-alpha,beta-dioxygenase; Flags: Precursor; | chromosome | CDS | 128108 | 1515 | - | 0.658746 |
| NA | XCV3695 | ABC transporter permease | SubName: Full=ABC transporter permease; | chromosome | CDS | 4269530 | 1230 | + | 0.653659 |
| NA | XCV3302 | cytochrome P-450 | SubName: Full=Cytochrome P-450; | chromosome | CDS | 3776330 | 1194 | - | 0.659129 |
| NA | XCV0256 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 297472 | 930 | - | 0.673118 |
| NA | XCV1555 | putative subtilase family serine protease | SubName: Full=Putative subtilase family serine protease; | chromosome | CDS | 1754158 | 1875 | + | 0.6512 |
| NA | XCV1731 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1949931 | 699 | + | 0.685265 |
| NA | XCV3630 | putative secreted protein | SubName: Full=Putative secreted protein; Flags: Precursor; | chromosome | CDS | 4176218 | 1281 | + | 0.677596 |
| NA | XCV3629 | putative amidohydrolase family protein | SubName: Full=Putative amidohydrolase family protein; Flags: Precursor; | chromosome | CDS | 4174812 | 1410 | + | 0.663121 |
| acpP | XCV1147 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 1275768 | 240 | + | 0.575 |
| bdhA | XCV2206 | 3-hydroxybutyrate dehydrogenase | SubName: Full=3-hydroxybutyrate dehydrogenase; EC=1.1.1.30; Flags: Precursor; | chromosome | CDS | 2536116 | 759 | - | 0.669302 |
| benE | XCV4391 | Benzoate permease | SubName: Full=Benzoate permease; | chromosome | CDS | 5061010 | 1206 | + | 0.660033 |
| bioC | XCV0398 | biotin biosynthesis protein BioC | RecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; | chromosome | CDS | 451447 | 885 | - | 0.696045 |
| copA | XCV3747 | Copper resistance protein A | SubName: Full=Copper resistance protein A; Flags: Precursor; | chromosome | CDS | 4328641 | 1785 | + | 0.667787 |
| fabB | XCV3742 | 3-oxoacyl-[acyl-carrier protein] synthase II | SubName: Full=3-oxoacyl-[acyl-carrier protein] synthase II; EC=2.3.1.41; | chromosome | CDS | 4322325 | 1209 | + | 0.660877 |
| fabF | XCV1148 | 3-oxoacyl-[acyl-carrier protein] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 1276149 | 1236 | + | 0.636731 |
| fabF | XCV4172 | 3-oxoacyl-[acyl-carrier protein] synthase II | SubName: Full=3-oxoacyl-[acyl-carrier protein] synthase II; EC=2.3.1.41; Flags: Precursor; | chromosome | CDS | 4784578 | 1200 | + | 0.705833 |
| fabG | XCV1146 | 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; | chromosome | CDS | 1274820 | 744 | + | 0.65457 |
| fabG | XCV4178 | 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; | chromosome | CDS | 4790777 | 732 | - | 0.663934 |
| hmgA | XCV0484 | homogentisate 1,2-dioxygenase | RecName: Full=Homogentisate 1,2-dioxygenase; Short=HGDO; EC=1.13.11.5; AltName: Full=Homogentisate oxygenase; AltName: Full=Homogentisic acid oxidase; AltName: Full=Homogentisicase; | chromosome | CDS | 548566 | 1320 | + | 0.648485 |
| hutI | XCV1679 | imidazolonepropionase | RecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; | chromosome | CDS | 1894059 | 1278 | - | 0.673709 |
| kduD | XCV0153 | 2-deoxy-D-gluconate 3-dehydrogenase | SubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; EC=1.1.1.125; | chromosome | CDS | 183258 | 756 | + | 0.656085 |
| pcaG | XCV0382 | protocatechuate 3,4-dioxygenase alpha chain | SubName: Full=Protocatechuate 3,4-dioxygenase alpha chain; EC=1.13.11.3; | chromosome | CDS | 435767 | 564 | + | 0.675532 |
| pcaH | XCV0381 | protocatechuate 3,4-dioxygenase beta chain | SubName: Full=Protocatechuate 3,4-dioxygenase beta chain; EC=1.13.11.3; | chromosome | CDS | 435028 | 735 | + | 0.662585 |
| phbB | XCV2598 | acetoacetyl-CoA reductase | SubName: Full=Acetoacetyl-CoA reductase; EC=1.1.1.36; | chromosome | CDS | 2928284 | 741 | + | 0.643725 |
| phbB | XCV3614 | acetoacetyl-CoA reductase | SubName: Full=Acetoacetyl-CoA reductase; EC=1.1.1.36; | chromosome | CDS | 4156053 | 741 | + | 0.649123 |
| rpfB | XCV1921 | long-chain-fatty-acid-CoA-ligase RpfB | SubName: Full=Long-chain-fatty-acid-CoA-ligase RpfB; EC=6.2.1.3; | chromosome | CDS | 2172007 | 1683 | - | 0.626263 |
| tauD | XCV0883 | Taurine dioxygenase | SubName: Full=Taurine dioxygenase; EC=1.14.11.17; | chromosome | CDS | 1012884 | 918 | - | 0.647059 |
| tpmT | XCV1496 | thiopurine S-methyltransferase | RecName: Full=Thiopurine S-methyltransferase; EC=2.1.1.67; AltName: Full=Thiopurine methyltransferase; | chromosome | CDS | 1685415 | 657 | - | 0.636225 |
| trn2 | XCV3936 | Tropinone reductase | SubName: Full=Tropinone reductase; | chromosome | CDS | 4517547 | 777 | - | 0.65251 |
| uptA | XCV3732 | fumarylacetoacetate hydrolase family protein | SubName: Full=Fumarylacetoacetate hydrolase family protein; EC=3.7.1.2; | chromosome | CDS | 4313631 | 990 | - | 0.669697 |
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