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2024-05-19 14:09:21

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Yersinia pestis KIM, KIM

Number of genes found: 80

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Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HMWP2 nonribosomal peptide synthetaseSubName: Full=Nonribosomal peptide synthetase; chromosome CDS3775907 6405 + 0.498205
acpP acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1941388 237 + 0.434599
bioC biotin biosynthesis proteinRecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome CDS3336759 804 - 0.538557
fabB 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; EC=2.3.1.41; chromosome CDS1758401 1224 + 0.495098
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; chromosome CDS3027228 1029 + 0.525753
fabF putative beta-ketoacyl-acp synthaseSubName: Full=Putative beta-ketoacyl-[acyl-carrier-protein] synthase; SubName: Full=Putative beta-ketoacyl-acp synthase; chromosome CDS2998231 1284 - 0.433022
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1941719 1242 + 0.492754
fabG putative 3-ketoacyl-acyl carrier protein reductaseSubName: Full=Putative 3-ketoacyl-acyl carrier protein reductase; SubName: Full=Putative beta-ketoacyl-[acyl-carrier-protein] reductase; chromosome CDS2997492 792 - 0.433081
fabG 3-oxoacyl-[acyl-carrier-protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; SubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; chromosome CDS1940500 735 + 0.482993
fabG 2,5-dichloro-2,5-cyclohexadiene-1,4-dioldehydrog enaseSubName: Full=2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS3001241 747 + 0.420348
fabG 3-oxoacyl-[acyl-carrier-protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; SubName: Full=Putative short chain oxidoreductase; chromosome CDS3201746 816 + 0.58701
fadD acyl-CoA synthetaseRecName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; AltName: Full=Long-chain acyl-CoA synthetase; chromosome CDS2463303 1740 - 0.481609
hpaB putative component B of 4-hydroxyphenylacetic acid-hydroxylaseSubName: Full=4-hydroxyphenylacetate 3-monooxygenase; EC=1.14.13.3; SubName: Full=Putative component B of 4-hydroxyphenylacetic acid-hydroxylase; chromosome CDS2801023 1563 - 0.486884
hpaH putative 2-oxo-hept-3-ene-1,7-dioate hydrataseSubName: Full=2-oxo-hept-3-ene-1,7-dioate hydratase; SubName: Full=Putative 2-oxo-hept-3-ene-1,7-dioate hydratase; chromosome CDS2804863 804 - 0.50995
irp1 HMWP1 nonribosomal peptide/polyketide synthaseSubName: Full=HMWP1 nonribosomal peptide/polyketide synthase; SubName: Full=Irp1 protein; SubName: Full=Ybt peptide/polyketide synthetase HMWP1; SubName: Full=Yersiniabactin biosynthetic protein; chromosome CDS2660837 9492 + 0.60788
irp2 HMWP2 nonribosomal peptide synthetaseSubName: Full=HMWP2 nonribosomal peptide synthetase; SubName: Full=Yersiniabactin biosynthetic protein; chromosome CDS2654642 6108 + 0.601506
iucA1 aerobactin synthetase (subunit alpha)SubName: Full=Aerobactin synthetase (Subunit alpha); chromosome CDS3725640 609 + 0.504105
iucA2 aerobactin synthetase (subunit alpha)SubName: Full=Aerobactin synthetase (Subunit alpha); chromosome CDS3726341 1071 + 0.546219
iucC aerobactin synthetase (subunit beta)SubName: Full=Aerobactin synthetase (Subunit beta); SubName: Full=Putative siderophore biosynthesis protein IucC; chromosome CDS3728342 1749 + 0.539165
iucD lysine : N6-hydroxylaseSubName: Full=Lysine : N6-hydroxylase; SubName: Full=Putative siderophore biosynthesis protein IucD; EC=1.14.13.59; chromosome CDS3730087 1329 + 0.535741
kduD 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; EC=1.1.1.125; chromosome CDS3548806 756 + 0.533069
kduD 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS2085066 807 - 0.486989
menE o-succinylbenzoate-CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; chromosome CDS1838811 1467 + 0.579414
menF isochorismate hydroxymutase 2SubName: Full=Isochorismate hydroxymutase 2; SubName: Full=Menaquinone-specific isochorismate synthase; chromosome CDS1832913 1374 + 0.5131
smtA S-adenosylmethionine-dependentmethyltransferaseSubName: Full=Putative methyltransferase; SubName: Full=S-adenosylmethionine-dependent methyltransferase; chromosome CDS3061232 792 - 0.478535
sufI suppressor of ftsIRecName: Full=Cell division protein FtsP; Flags: Precursor; chromosome CDS3886844 1425 - 0.524211
tauD taurine dioxygenaseSubName: Full=Putative taurine dioxygenase; SubName: Full=Taurine dioxygenase; chromosome CDS4424091 867 + 0.508651
tehB tellurite resistanceSubName: Full=Putative tellurite resistance protein; SubName: Full=TehB protein; SubName: Full=Tellurite resistance; chromosome CDS2605419 888 - 0.45045
ucpA putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2863500 741 - 0.535762
y0125 sigma cross-reacting protein 27A (SCRP-27A)SubName: Full=Enhancing lycopene biosynthesis protein 2; SubName: Full=Sigma cross-reacting protein 27A (SCRP-27A); chromosome CDS131666 654 - 0.457187
y0143 hypothetical proteinSubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; chromosome CDS154180 624 - 0.482372
y0144 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS154816 573 - 0.481675
y0145 hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS155378 783 - 0.50447
y0146 putative ATP-binding component of ABC transport systemSubName: Full=Putative ABC transporter ATP-binding protein; SubName: Full=Putative ATP-binding component of ABC transport system; chromosome CDS156378 819 - 0.492063
y0395 hypothetical proteinSubName: Full=Uncharacterized protein; SubName: Full=Uncharacterized protein, possibly involved in aromatic compounds catabolism; chromosome CDS441615 471 - 0.484076
y0443 putative carboxymethylenebutenolidaseRecName: Full=Putative carboxymethylenebutenolidase; EC=3.1.1.45; AltName: Full=Dienelactone hydrolase; Short=DLH; chromosome CDS493701 873 - 0.498282
y0777 hypothetical proteinRecName: Full=Blue copper oxidase CueO; AltName: Full=Copper efflux oxidase; Flags: Precursor; chromosome CDS869982 1674 + 0.528076
y0839 putative dehydrogenaseSubName: Full=Putative dehydrogenase; chromosome CDS940153 771 + 0.499352
y0970 putative biotin synthesis proteinSubName: Full=Putative biotin synthesis protein; SubName: Full=SAM-dependent methyltransferases; SubName: Full=Uncharacterized protein; chromosome CDS1095812 522 + 0.43295
y0984 putative dehydrogenaseSubName: Full=Probable short-chain dehydrogenase; SubName: Full=Putative dehydrogenase; chromosome CDS1116142 681 + 0.503671
y1098 putative oxidoreductaseSubName: Full=Probable short-chain dehydrogenase; EC=1.-.-.-; SubName: Full=Putative oxidoreductase; chromosome CDS1237517 777 - 0.526384
y1100 putative ATP-binding component of a transport systemSubName: Full=Putative ABC transporter ATP-binding protein; SubName: Full=Putative ATP-binding component of a transport system; chromosome CDS1239286 687 + 0.521106
y1101 putative oxidoreductaseSubName: Full=Putative oxidoreductase; SubName: Full=Putative permease; chromosome CDS1239957 2442 + 0.547093
y1118 hypothetical proteinSubName: Full=Lysophospholipase; SubName: Full=Uncharacterized protein; chromosome CDS1254614 1764 + 0.521542
y1533 hypotheticalSubName: Full=Putative fimbrial protein; SubName: Full=Uncharacterized protein; chromosome CDS1696883 1032 - 0.453488
y1645 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1819141 726 + 0.451791
y1833 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS2018116 732 + 0.464481
y1933 hypothetical proteinSubName: Full=Uncharacterized protein; SubName: Full=Uncharacterized protein, possibly involved in aromatic compounds catabolism; chromosome CDS2131491 417 + 0.53717
y2056 putative oxidoreductaseSubName: Full=Putative oxidoreductase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS2264516 849 - 0.508834
y2162 hypothetical proteinSubName: Full=Putative pyrazinamidase/nicotinamidase; EC=3.5.1.19; SubName: Full=Uncharacterized protein; chromosome CDS2390163 648 + 0.496914
y2229 putative isomeraseSubName: Full=Putative isomerase; chromosome CDS2457043 693 - 0.468975
y2261 hypothetical proteinRecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS2490503 804 + 0.49005
y2262 putative enzymeRecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS2491303 972 + 0.52572
y2317 putative oxidoreductaseSubName: Full=Putative dehydrogenase; SubName: Full=Putative oxidoreductase; chromosome CDS2550900 681 + 0.403818
y2318 hypothetical proteinSubName: Full=SAM-dependent methyltransferases; SubName: Full=Uncharacterized protein; chromosome CDS2551685 660 + 0.443939
y2340 putative imidazolonepropionaseRecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; chromosome CDS2576019 1296 + 0.502315
y2497 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2758268 2067 - 0.520561
y2561 putative enzymeSubName: Full=Putative enzyme; SubName: Full=rRNA (Guanine-N1-)-methyltransferase; EC=2.1.1.51; chromosome CDS2822979 840 - 0.485714
y2599 putative isomeraseSubName: Full=Putative hydrolase; EC=5.3.3.-; SubName: Full=Putative isomerase; chromosome CDS2862610 843 - 0.5172
y2709 putative 3-oxoacyl-acyl carrier protein reductaseSubName: Full=Putative 3-oxoacyl-acyl carrier protein reductase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS2993981 789 - 0.395437
y2741 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS3024987 411 + 0.491484
y2836 putative ABC transport proteinSubName: Full=Putative ABC transport protein; chromosome CDS3138663 798 - 0.498747
y3096 hypothetical proteinSubName: Full=SAM-dependent methyltransferases; SubName: Full=Uncharacterized protein; chromosome CDS3406165 720 - 0.466667
y3333 hypotheticalSubName: Full=Putative virulence determinant; SubName: Full=Uncharacterized protein; chromosome CDS3665557 9333 - 0.372228
y3377 hypotheticalSubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; chromosome CDS3723154 834 + 0.383693
y3406 nonribosomal peptide synthetase/polyketide synthaseSubName: Full=Nonribosomal peptide synthetase/polyketide synthase; chromosome CDS3770663 3414 + 0.463386
y3411 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS3782224 333 + 0.531532
y3412 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS3782564 1689 + 0.534636
y3419 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS3791123 1128 + 0.490248
y3420 thioesteraseSubName: Full=Putative thioesterase; SubName: Full=Thioesterase; chromosome CDS3792240 768 + 0.488281
y3856 hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome CDS4294468 771 + 0.574578
y3857 putative secreted metalloproteaseSubName: Full=Metalloprotease; SubName: Full=Putative secreted metalloprotease; chromosome CDS4295303 1338 - 0.420777
ybtD yersiniabactin biosynthesis componentSubName: Full=Yersiniabactin biosynthesis component; chromosome CDS2846453 657 - 0.461187
ybtE salicyl-AMP ligaseSubName: Full=Salicyl-AMP ligase; SubName: Full=Salicyl-AMP ligase YbtE; SubName: Full=YbtE protein; SubName: Full=Yersiniabactin 2,3-dihydoxybenzoate-AMP ligase; SubName: Full=Yersiniabactin siderophore biosynthetic protein; chromosome CDS2672229 1578 + 0.588086
ybtT yersiniabactin thioesteraseSubName: Full=Yersiniabactin thioesterase; chromosome CDS2671569 657 + 0.578387
ybtU thiazolinyl-S-HMWP1 reductaseSubName: Full=Thiazolinyl-S-HMWP1 reductase; SubName: Full=Yersiniabactin biosynthetic protein YbtU; chromosome CDS2670265 1161 + 0.601206
ypeI putative homoserine lactone synthaseRecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; chromosome CDS1917056 657 - 0.365297
ysuG putative siderophore biosynthetic proteinSubName: Full=Putative siderophore biosynthetic enzyme; SubName: Full=Putative siderophore biosynthetic protein; chromosome CDS2904979 1890 - 0.469841
ysuI putative siderophore biosynthetic proteinSubName: Full=Putative siderophore biosynthetic enzyme; SubName: Full=Putative siderophore biosynthetic protein; chromosome CDS2907398 1299 - 0.431101
ytbI putative N-acylhomoserine lactone synthaseRecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; chromosome CDS3719465 651 + 0.411674