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2024-05-17 18:42:20

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720

Number of genes found: 81

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Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
STM0331 putative fumarylacetoacetate (FAA) hydrolaseSubName: Full=Putative fumarylacetoacetate (FAA) hydrolase; chromosome CDS374837 879 + 0.498294
STM0352 putative cation efflux pumpSubName: Full=Putative cation efflux pump; chromosome CDS397057 1227 - 0.602282
STM0927 putative Fels-1 prophage tail assembly proteinRecName: Full=Tail fiber assembly protein homolog from lambdoid prophage Fels-1; chromosome CDS1001442 576 + 0.472222
STM0950 homolog of slsA in STMSubName: Full=Homolog of slsA in STM; chromosome CDS1027679 678 - 0.538348
STM1366 putative protein PaaISubName: Full=Uncharacterized protein; chromosome CDS1449557 411 + 0.56691
STM1606 putative benzoate membrane transport proteinSubName: Full=Putative benzoate membrane transport protein; chromosome CDS1696306 1179 + 0.578456
STM1638 putative SAM-dependent methyltransferasesSubName: Full=Putative SAM-dependent methyltransferase; chromosome CDS1729115 438 + 0.484018
STM1675 putative short-chain alcohol dehydrogenaseSubName: Full=Putative short-chain alcohol dehydrogenase; chromosome CDS1768000 714 + 0.57423
STM2011 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS2092957 327 - 0.409786
STM2177 putative flutathione S-transferaseSubName: Full=Putative flutathione S-transferase; chromosome CDS2273632 702 - 0.545584
STM2178 putative 1,2-dioxygenase proteinSubName: Full=Putative 1,2-dioxygenase protein; chromosome CDS2274349 1038 - 0.567437
STM4506 putative dienelactone hydrolaseSubName: Full=Putative dienelactone hydrolase; chromosome CDS4760028 675 - 0.539259
acpP acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; AltName: Full=Cytosolic-activating factor; Short=CAF; AltName: Full=Fatty acid synthase acyl carrier protein; chromosome CDS1280113 237 + 0.476793
bioC biotin biosynthesis; reaction prior to pimeloyl CoARecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome CDS862348 756 + 0.597884
caiC crotonobetaine/carnitine-CoA ligaseRecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; chromosome CDS82564 1554 - 0.507722
cueO putative multicopper oxidaseRecName: Full=Blue copper oxidase CueO; AltName: Full=Copper efflux oxidase; Flags: Precursor; chromosome CDS196532 1611 + 0.564246
dlhH putative dienelactone hydrolase familyRecName: Full=Putative carboxymethylenebutenolidase; EC=3.1.1.45; AltName: Full=Dienelactone hydrolase; Short=DLH; chromosome CDS4173793 813 - 0.574416
entA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenaseSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; EC=1.3.1.28; chromosome CDS659921 756 + 0.585979
entB 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismataseSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase; EC=3.3.2.1; chromosome CDS659064 858 + 0.568765
entC isochorismate synthetase, enterochelin biosynthesisSubName: Full=Isochorismate synthetase, enterochelin biosynthesis; EC=5.4.4.2; chromosome CDS656255 1176 + 0.582483
entD enterochelin synthetase, component D (phoshpantetheinyltransferase)RecName: Full=4-phosphopantetheinyl transferase EntD; EC=2.7.8.-; AltName: Full=Enterobactin synthase component D; AltName: Full=Enterochelin synthase D; chromosome CDS640808 705 - 0.558865
entE 2,3-dihydroxybenzoate-AMP ligaseSubName: Full=2,3-dihydroxybenzoate-AMP ligase; EC=6.3.2.-; chromosome CDS657440 1611 + 0.574178
entF enterobactin synthetase, component F (nonribosomal peptide synthetase)SubName: Full=Enterobactin synthetase, component F (Nonribosomal peptide synthetase); chromosome CDS645462 3885 + 0.593822
eutK putative carboxysome structural proteinRecName: Full=Ethanolamine utilization protein EutK; Flags: Precursor; chromosome CDS2565160 495 - 0.60202
eutM putative detox protein in ethanolamine utilizationRecName: Full=Ethanolamine utilization protein EutM; Flags: Precursor; chromosome CDS2575212 291 - 0.604811
eutN putative detox protein in ethanolamine utilizationRecName: Full=Ethanolamine utilization protein EutN; chromosome CDS2574812 300 - 0.573333
fabB 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; EC=2.3.1.41; chromosome CDS2488622 1215 - 0.573663
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1280435 1242 + 0.552335
fabG 3-oxoacyl-[acyl-carrier-protein] reductaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] reductase FabG; EC=1.1.1.100; AltName: Full=3-ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-Ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-ketoacyl-ACP reductase; chromosome CDS1279223 735 + 0.503401
fadD acyl-CoA synthetaseRecName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; AltName: Full=Long-chain acyl-CoA synthetase; chromosome CDS1915222 1686 - 0.523132
hpaB 4-hydroxyphenylacetate catabolism proteinSubName: Full=4-hydroxyphenylacetate catabolism protein; EC=1.14.14.9; chromosome CDS1185726 1563 - 0.525912
hpaG 4-hydroxyphenylacetate catabolism proteinSubName: Full=4-hydroxyphenylacetate catabolism protein; EC=4.1.1.68; chromosome CDS1188221 1290 + 0.563566
hpaH 4-hydroxyphenylacetate catabolism proteinSubName: Full=4-hydroxyphenylacetate catabolism protein; EC=4.2.1.-; chromosome CDS1192359 804 + 0.590796
hutI ImidazolonepropionaseRecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; chromosome CDS851841 1224 + 0.583333
iacP putative acyl carrier proteinRecName: Full=Probable acyl carrier protein IacP; Short=ACP; chromosome CDS3024412 249 - 0.37751
idnO 5-keto-D-gluconate-5-reductaseSubName: Full=5-keto-D-gluconate-5-reductase; chromosome CDS4727174 765 - 0.535948
kduD 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; EC=1.1.1.125; chromosome CDS3177574 762 - 0.518373
menE o-succinylbenzoate-CoA ligaseRecName: Full=2-succinylbenzoate--CoA ligase; EC=6.2.1.26; AltName: Full=o-succinylbenzoyl-CoA synthetase; Short=OSB-CoA synthetase; chromosome CDS2411673 1368 - 0.599415
menF isochorismate synthaseSubName: Full=Isochorismate synthase; EC=5.4.4.2; chromosome CDS2417382 1296 - 0.568673
nhoA putative arylamine N-acetyltransferaseRecName: Full=N-hydroxyarylamine O-acetyltransferase; EC=2.3.1.118; AltName: Full=Arylamine N-acetyltransferase; AltName: Full=Arylhydroxamate N,O-acetyltransferase; AltName: Full=NAT101; chromosome CDS1668376 846 - 0.522459
pduA propanediol utilization proteinRecName: Full=Propanediol utilization protein PduA; chromosome CDS2116846 285 + 0.536842
pduC propanediol utilization dehydratase, large subunitRecName: Full=Propanediol dehydratase large subunit; EC=4.2.1.28; chromosome CDS2117958 1665 + 0.568168
pduE propanediol utilization dehydratase, small subunitRecName: Full=Propanediol dehydratase small subunit; EC=4.2.1.28; AltName: Full=Propanediol utilization protein PduE; chromosome CDS2120322 522 + 0.561303
pduJ propanediol utilization proteinSubName: Full=Propanediol utilization protein; chromosome CDS2123044 276 + 0.561594
pduK propanediol utilization proteinSubName: Full=Propanediol utilization protein; chromosome CDS2123323 483 + 0.559006
pduL propanediol utilization proteinRecName: Full=Phosphate propanoyltransferase; EC=2.3.1.222; AltName: Full=Phosphate acyltransferase PduL; AltName: Full=Phosphotransacylase PduL; Short=PTAC; AltName: Full=Propanediol utilization protein PduL; chromosome CDS2123805 633 + 0.601896
pduN propanediol utilization proteinSubName: Full=Propanediol utilization protein; chromosome CDS2124929 276 + 0.612319
pduT propanediol utilization proteinSubName: Full=Propanediol utilization protein; chromosome CDS2130094 555 + 0.583784
pduX propanediol utilization proteinRecName: Full=L-threonine kinase; EC=2.7.1.177; AltName: Full=Propanediol utilization protein PduX; chromosome CDS2132712 903 + 0.55814
pncA nicotinamidase/ pyrazinamidaseSubName: Full=Nicotinamidase/ pyrazinamidase; EC=3.5.1.-; EC=3.5.1.19; chromosome CDS1371115 657 - 0.575342
rrmA 23S rRNA m1G745 methyltransferaseSubName: Full=23S rRNA m1G745 methyltransferase; chromosome CDS1932707 810 - 0.561728
slsA putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS3959839 681 + 0.522761
smtA S-adenosylmethionine-dependentmethyltransferaseSubName: Full=S-adenosylmethionine-dependent methyltransferase; chromosome CDS1077406 804 + 0.55597
srlD glucitol (sorbitol)-6-phosphate dehydrogenaseSubName: Full=Glucitol (Sorbitol)-6-phosphate dehydrogenase; EC=1.1.1.140; chromosome CDS2980225 780 + 0.547436
sufI suppressor of ftsIRecName: Full=Cell division protein FtsP; Flags: Precursor; chromosome CDS3334467 1413 - 0.589526
tehB putative methyltransferaseSubName: Full=Putative methyltransferase; chromosome CDS1698362 597 - 0.499162
ucpA putative oxidoreductaseRecName: Full=Oxidoreductase UcpA; EC=1.-.-.-; chromosome CDS2556599 792 - 0.539141
yafE putative methyltransferase in menaquinone/biotin biosynthesisSubName: Full=Putative methyltransferase in menaquinone/biotin biosynthesis; chromosome CDS299097 771 + 0.525292
yafS putative SAM-dependent methyltransferaseSubName: Full=Putative SAM-dependent methyltransferase; chromosome CDS302152 723 + 0.507607
ybbA putative ABC superfamily (atp_bind) transporterSubName: Full=Putative ABC superfamily (Atp_bind) transporter; chromosome CDS566439 687 + 0.590975
ybbO putative oxidoreductaseSubName: Full=Putative oxidoreductase; EC=1.-.-.-; chromosome CDS564929 771 - 0.549935
ybbP putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS567122 2415 + 0.585093
ybdB putative protein PaaI, possibly involved in aromatic compounds catabolismRecName: Full=Proofreading thioesterase EntH; EC=3.1.2.-; AltName: Full=Enterobactin synthase component H; chromosome CDS660679 414 + 0.601449
ycgM putative fumarylacetoacetate (FAA) hydrolase family proteinSubName: Full=Putative fumarylacetoacetate (FAA) hydrolase family protein; chromosome CDS1910959 660 - 0.531818
yciK putative oxoacyl-(acyl carrier protein) reductaseSubName: Full=Putative oxoacyl-(Acyl carrier protein) reductase; chromosome CDS1814369 762 + 0.568241
ydiD plant pathogenicity factor-like proteinSubName: Full=Plant pathogenicity factor-like protein; chromosome CDS1430189 1641 - 0.533211
yecD putative isochorismataseSubName: Full=Putative isochorismatase; chromosome CDS1997208 567 + 0.559083
yecO putative SAM-dependent methyltransferasesRecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS1999078 744 + 0.533602
yecP putative enzymeRecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS1999818 972 + 0.552469
yghA putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3318580 885 + 0.566102
yhbL sigma cross-reacting protein 27A (SCRP-27A)SubName: Full=Sigma cross-reacting protein 27A (SCRP-27A); chromosome CDS3489612 654 - 0.577982
yhiH putative ABC-type multidrug transport systemSubName: Full=Putative ABC-type multidrug transport system; chromosome CDS3752958 2691 - 0.577852
yhiQ putative SAM-dependent methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome CDS3763175 759 - 0.624506
yigI putative PaaI proteinRecName: Full=Uncharacterized protein YigI; chromosome CDS4160991 486 - 0.563786
yjhP putative SAM-dependent methyltransferaseSubName: Full=Putative SAM-dependent methyltransferase; chromosome CDS4753941 1632 - 0.54473
yohF putative oxidoreductaseSubName: Full=Putative oxidoreductase; EC=1.-.-.-; chromosome CDS2268002 762 - 0.547244
yojI putative ABC-type multidrug/protein/lipid transport systemSubName: Full=Putative ABC-type multidrug/protein/lipid transport system; chromosome CDS2360762 1644 - 0.548662
yrbC putative ABC superfamily transport proteinSubName: Full=Putative ABC superfamily transport protein; chromosome CDS3476946 636 - 0.531447
yrbD putative ABC superfamily transport proteinSubName: Full=Putative ABC superfamily transport protein; chromosome CDS3477600 552 - 0.51087
yrbE putative ABC superfamily transport proteinSubName: Full=Putative ABC superfamily transport protein; chromosome CDS3478156 783 - 0.577267
yrbF putative ABC superfamily transport proteinSubName: Full=Putative ABC superfamily transport protein; chromosome CDS3478946 813 - 0.583026