Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
Number of genes found: 81
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
STM0331 | putative fumarylacetoacetate (FAA) hydrolase | chromosome | CDS | 374837 | 879 | + | 0.498294 | |
STM0352 | putative cation efflux pump | chromosome | CDS | 397057 | 1227 | - | 0.602282 | |
STM0927 | putative Fels-1 prophage tail assembly protein | chromosome | CDS | 1001442 | 576 | + | 0.472222 | |
STM0950 | homolog of slsA in STM | chromosome | CDS | 1027679 | 678 | - | 0.538348 | |
STM1366 | putative protein PaaI | chromosome | CDS | 1449557 | 411 | + | 0.56691 | |
STM1606 | putative benzoate membrane transport protein | chromosome | CDS | 1696306 | 1179 | + | 0.578456 | |
STM1638 | putative SAM-dependent methyltransferases | chromosome | CDS | 1729115 | 438 | + | 0.484018 | |
STM1675 | putative short-chain alcohol dehydrogenase | chromosome | CDS | 1768000 | 714 | + | 0.57423 | |
STM2011 | putative cytoplasmic protein | chromosome | CDS | 2092957 | 327 | - | 0.409786 | |
STM2177 | putative flutathione S-transferase | chromosome | CDS | 2273632 | 702 | - | 0.545584 | |
STM2178 | putative 1,2-dioxygenase protein | chromosome | CDS | 2274349 | 1038 | - | 0.567437 | |
STM4506 | putative dienelactone hydrolase | chromosome | CDS | 4760028 | 675 | - | 0.539259 | |
acpP | acyl carrier protein | chromosome | CDS | 1280113 | 237 | + | 0.476793 | |
bioC | biotin biosynthesis; reaction prior to pimeloyl CoA | chromosome | CDS | 862348 | 756 | + | 0.597884 | |
caiC | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 82564 | 1554 | - | 0.507722 | |
cueO | putative multicopper oxidase | chromosome | CDS | 196532 | 1611 | + | 0.564246 | |
dlhH | putative dienelactone hydrolase family | chromosome | CDS | 4173793 | 813 | - | 0.574416 | |
entA | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | chromosome | CDS | 659921 | 756 | + | 0.585979 | |
entB | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase | chromosome | CDS | 659064 | 858 | + | 0.568765 | |
entC | isochorismate synthetase, enterochelin biosynthesis | chromosome | CDS | 656255 | 1176 | + | 0.582483 | |
entD | enterochelin synthetase, component D (phoshpantetheinyltransferase) | chromosome | CDS | 640808 | 705 | - | 0.558865 | |
entE | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 657440 | 1611 | + | 0.574178 | |
entF | enterobactin synthetase, component F (nonribosomal peptide synthetase) | chromosome | CDS | 645462 | 3885 | + | 0.593822 | |
eutK | putative carboxysome structural protein | chromosome | CDS | 2565160 | 495 | - | 0.60202 | |
eutM | putative detox protein in ethanolamine utilization | chromosome | CDS | 2575212 | 291 | - | 0.604811 | |
eutN | putative detox protein in ethanolamine utilization | chromosome | CDS | 2574812 | 300 | - | 0.573333 | |
fabB | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 2488622 | 1215 | - | 0.573663 | |
fabF | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1280435 | 1242 | + | 0.552335 | |
fabG | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1279223 | 735 | + | 0.503401 | |
fadD | acyl-CoA synthetase | chromosome | CDS | 1915222 | 1686 | - | 0.523132 | |
hpaB | 4-hydroxyphenylacetate catabolism protein | chromosome | CDS | 1185726 | 1563 | - | 0.525912 | |
hpaG | 4-hydroxyphenylacetate catabolism protein | chromosome | CDS | 1188221 | 1290 | + | 0.563566 | |
hpaH | 4-hydroxyphenylacetate catabolism protein | chromosome | CDS | 1192359 | 804 | + | 0.590796 | |
hutI | Imidazolonepropionase | chromosome | CDS | 851841 | 1224 | + | 0.583333 | |
iacP | putative acyl carrier protein | chromosome | CDS | 3024412 | 249 | - | 0.37751 | |
idnO | 5-keto-D-gluconate-5-reductase | chromosome | CDS | 4727174 | 765 | - | 0.535948 | |
kduD | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3177574 | 762 | - | 0.518373 | |
menE | o-succinylbenzoate-CoA ligase | chromosome | CDS | 2411673 | 1368 | - | 0.599415 | |
menF | isochorismate synthase | chromosome | CDS | 2417382 | 1296 | - | 0.568673 | |
nhoA | putative arylamine N-acetyltransferase | chromosome | CDS | 1668376 | 846 | - | 0.522459 | |
pduA | propanediol utilization protein | chromosome | CDS | 2116846 | 285 | + | 0.536842 | |
pduC | propanediol utilization dehydratase, large subunit | chromosome | CDS | 2117958 | 1665 | + | 0.568168 | |
pduE | propanediol utilization dehydratase, small subunit | chromosome | CDS | 2120322 | 522 | + | 0.561303 | |
pduJ | propanediol utilization protein | chromosome | CDS | 2123044 | 276 | + | 0.561594 | |
pduK | propanediol utilization protein | chromosome | CDS | 2123323 | 483 | + | 0.559006 | |
pduL | propanediol utilization protein | chromosome | CDS | 2123805 | 633 | + | 0.601896 | |
pduN | propanediol utilization protein | chromosome | CDS | 2124929 | 276 | + | 0.612319 | |
pduT | propanediol utilization protein | chromosome | CDS | 2130094 | 555 | + | 0.583784 | |
pduX | propanediol utilization protein | chromosome | CDS | 2132712 | 903 | + | 0.55814 | |
pncA | nicotinamidase/ pyrazinamidase | chromosome | CDS | 1371115 | 657 | - | 0.575342 | |
rrmA | 23S rRNA m1G745 methyltransferase | chromosome | CDS | 1932707 | 810 | - | 0.561728 | |
slsA | putative inner membrane protein | chromosome | CDS | 3959839 | 681 | + | 0.522761 | |
smtA | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 1077406 | 804 | + | 0.55597 | |
srlD | glucitol (sorbitol)-6-phosphate dehydrogenase | chromosome | CDS | 2980225 | 780 | + | 0.547436 | |
sufI | suppressor of ftsI | chromosome | CDS | 3334467 | 1413 | - | 0.589526 | |
tehB | putative methyltransferase | chromosome | CDS | 1698362 | 597 | - | 0.499162 | |
ucpA | putative oxidoreductase | chromosome | CDS | 2556599 | 792 | - | 0.539141 | |
yafE | putative methyltransferase in menaquinone/biotin biosynthesis | chromosome | CDS | 299097 | 771 | + | 0.525292 | |
yafS | putative SAM-dependent methyltransferase | chromosome | CDS | 302152 | 723 | + | 0.507607 | |
ybbA | putative ABC superfamily (atp_bind) transporter | chromosome | CDS | 566439 | 687 | + | 0.590975 | |
ybbO | putative oxidoreductase | chromosome | CDS | 564929 | 771 | - | 0.549935 | |
ybbP | putative inner membrane protein | chromosome | CDS | 567122 | 2415 | + | 0.585093 | |
ybdB | putative protein PaaI, possibly involved in aromatic compounds catabolism | chromosome | CDS | 660679 | 414 | + | 0.601449 | |
ycgM | putative fumarylacetoacetate (FAA) hydrolase family protein | chromosome | CDS | 1910959 | 660 | - | 0.531818 | |
yciK | putative oxoacyl-(acyl carrier protein) reductase | chromosome | CDS | 1814369 | 762 | + | 0.568241 | |
ydiD | plant pathogenicity factor-like protein | chromosome | CDS | 1430189 | 1641 | - | 0.533211 | |
yecD | putative isochorismatase | chromosome | CDS | 1997208 | 567 | + | 0.559083 | |
yecO | putative SAM-dependent methyltransferases | chromosome | CDS | 1999078 | 744 | + | 0.533602 | |
yecP | putative enzyme | chromosome | CDS | 1999818 | 972 | + | 0.552469 | |
yghA | putative oxidoreductase | chromosome | CDS | 3318580 | 885 | + | 0.566102 | |
yhbL | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 3489612 | 654 | - | 0.577982 | |
yhiH | putative ABC-type multidrug transport system | chromosome | CDS | 3752958 | 2691 | - | 0.577852 | |
yhiQ | putative SAM-dependent methyltransferase | chromosome | CDS | 3763175 | 759 | - | 0.624506 | |
yigI | putative PaaI protein | chromosome | CDS | 4160991 | 486 | - | 0.563786 | |
yjhP | putative SAM-dependent methyltransferase | chromosome | CDS | 4753941 | 1632 | - | 0.54473 | |
yohF | putative oxidoreductase | chromosome | CDS | 2268002 | 762 | - | 0.547244 | |
yojI | putative ABC-type multidrug/protein/lipid transport system | chromosome | CDS | 2360762 | 1644 | - | 0.548662 | |
yrbC | putative ABC superfamily transport protein | chromosome | CDS | 3476946 | 636 | - | 0.531447 | |
yrbD | putative ABC superfamily transport protein | chromosome | CDS | 3477600 | 552 | - | 0.51087 | |
yrbE | putative ABC superfamily transport protein | chromosome | CDS | 3478156 | 783 | - | 0.577267 | |
yrbF | putative ABC superfamily transport protein | chromosome | CDS | 3478946 | 813 | - | 0.583026 |