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2024-05-19 05:30:14

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Shigella flexneri 2a str. 301, 301

Number of genes found: 76

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF2021 orf, conserved hypothetical proteinchromosome CDS2045549 669 + 0.405082
NA SF3021 orf, conserved hypothetical proteinchromosome CDS3118716 1689 + 0.529307
NA SF1644 similar to 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS1674136 621 - 0.454106
NA SF1014 putative synthetasechromosome CDS1060231 735 - 0.557823
NA SF4282 orf, conserved hypothetical proteinchromosome CDS4460650 792 + 0.540404
NA SF1716 orf, conserved hypothetical proteinchromosome CDS1748137 411 - 0.508516
NA SF4374 4-hydroxyphenylacetate 3-monooxygenase large chainchromosome CDS4546402 1053 - 0.54321
NA SF3908 putative enzymechromosome CDS4028494 882 - 0.531746
NA SF3046 orf, conserved hypothetical proteinchromosome CDS3142294 411 - 0.513382
NA SF2201 orf, conserved hypothetical proteinchromosome CDS2228275 669 + 0.405082
NA SF1169 putative isomerasechromosome CDS1211781 660 + 0.518182
NA SF4375 orf, partial conserved hypothetical proteinchromosome CDS4547451 510 - 0.556863
NA SF1204 putative sensor-type regulatorchromosome CDS1247863 1929 + 0.513738
NA SF1808 orf, conserved hypothetical proteinchromosome CDS1844431 1758 - 0.507964
NA SF3023 orf, conserved hypothetical proteinchromosome CDS3121348 249 + 0.405622
NA SF1191 orf, conserved hypothetical proteinchromosome CDS1235208 810 - 0.544444
NA SF2491 orf, conserved hypothetical proteinchromosome CDS2551164 501 - 0.576846
acp CP0124 Acp, putative acyl carrier proteinpCP301 CDS106938 237 - 0.291139
acpP SF1098 acyl carrier proteinchromosome CDS1139332 237 + 0.481013
bioC SF0727 biotin biosynthesis protein BioCchromosome CDS754349 756 + 0.562169
caiC SF0034 probable crotonobetaine/carnitine-CoA ligasechromosome CDS35701 1569 - 0.50733
entA SF0510 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS531914 747 + 0.575636
entB SF0509 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatasechromosome CDS531057 858 + 0.551282
entD SF0495 enterochelin synthetase, component Dchromosome CDS512184 630 - 0.485714
entE SF0508 2,3-dihydroxybenzoate-AMP ligasechromosome CDS529433 1611 + 0.563004
entF SF0498 ATP-dependent serine activating enzymechromosome CDS516881 3846 + 0.565003
fabB SF2399 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2448487 1242 - 0.561192
fabF SF1099 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1139654 1242 + 0.533011
fabG SF1097 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1138387 735 + 0.514286
fadD SF1423 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligasechromosome CDS1460476 1752 + 0.511986
hcaA2 SF2586 small terminal subunit of phenylpropionate dioxygenasechromosome CDS2655243 519 + 0.527938
hcaB SF2588 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genasechromosome CDS2656078 813 + 0.560886
hpaG SF4384 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerasechromosome CDS4555819 1290 - 0.55969
hpaH SF4380 2-oxo-hept-3-ene-1, 7-dioate hydratasechromosome CDS4552242 804 - 0.575871
iucA SF3715 siderophore biosynthesis proteinchromosome CDS3820793 1782 + 0.535915
iucC SF3717 siderophore biosynthesis proteinchromosome CDS3823522 1743 + 0.545611
iucD SF3718 lysine:N6-hydroxylasechromosome CDS3825261 1338 + 0.46562
kduD SF2852 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2942858 762 - 0.519685
menE SF2339 O-succinylbenzoate-CoA ligasechromosome CDS2386378 1356 - 0.562684
menF SF2344 isochorismate hydroxymutase 2chromosome CDS2392078 1071 - 0.538749
smtA SF0917 S-adenosylmethionine-dependentmethyltransferasechromosome CDS957322 786 + 0.513995
sorD SF4093 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4251932 807 - 0.509294
srlD SF2728 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2801410 780 + 0.530769
sufI SF3061 suppressor of ftsIchromosome CDS3156698 1413 - 0.56334
tauD SF0250 taurine dioxygenasechromosome CDS269454 852 - 0.545775
tehB SF1780 tellurite resistance protein TehBchromosome CDS1817790 594 - 0.459596
ucpA SF2480 putative oxidoreductasechromosome CDS2541136 792 - 0.54798
vpsA SF3235 putative ATP-binding component of a transport systemchromosome CDS3331437 810 - 0.54321
vpsB SF3234 integral membrane proteinchromosome CDS3330647 783 - 0.554278
vpsC SF3233 cytoplasmic membrane proteinchromosome CDS3330091 552 - 0.498188
yacK SF0119 orf, conserved hypothetical proteinchromosome CDS135334 1551 + 0.544165
yafE SF0196 putative biotin synthesis proteinchromosome CDS224843 621 + 0.492754
yafS SF0199 orf, conserved hypothetical proteinchromosome CDS227715 726 + 0.495868
ybbA SF0439 putative ATP-binding component of a transport systemchromosome CDS456052 687 + 0.56623
ybbO SF0438 putative oxidoreductasechromosome CDS454660 810 - 0.537037
ybbP SF0441 putative oxidoreductasechromosome CDS456735 2280 + 0.575
ybdB SF0511 orf, conserved hypothetical proteinchromosome CDS532663 414 + 0.577295
ycaC SF0856 orf, conserved hypothetical proteinchromosome CDS896266 627 - 0.457735
yciK SF1273 putative oxidoreductasechromosome CDS1322638 759 - 0.524374
ydgB SF1627 putative oxidoreductasechromosome CDS1655613 723 + 0.50899
ydiD SF1529 putative ligase/synthetasechromosome CDS1562330 1701 - 0.496767
ydjB SF1455 orf, conserved hypothetical proteinchromosome CDS1490225 660 - 0.530303
yebH SF1404 putative enzymechromosome CDS1442460 810 + 0.518519
yecO SF1911 orf, conserved hypothetical proteinchromosome CDS1946197 744 + 0.505376
yecP SF1912 putative enzymechromosome CDS1946937 972 + 0.519547
yeiN SF2250 orf, conserved hypothetical proteinchromosome CDS2279855 939 - 0.492013
ygfF SF2888 putative oxidoreductasechromosome CDS2979072 744 - 0.549731
yghA SF3049 putative oxidoreductasechromosome CDS3145103 885 + 0.545763
yhbL SF3249 sigma cross-reacting protein 27A (SCRP-27A)chromosome CDS3341973 654 - 0.527523
yhiQ SF3528 orf, conserved hypothetical proteinchromosome CDS3618066 753 - 0.590969
yhiU SF3599 chromosome pseudo3702719 297 - 0.508417
yhiU SF3599 chromosome pseudo3702719 297 - 0.508417
yigI SF3898 orf, conserved hypothetical proteinchromosome CDS4017372 486 - 0.524691
yjgI SF4241 putative oxidoreductasechromosome CDS4413064 714 + 0.539216
yojI SF2295 putative ATP-binding component of a transport systemchromosome CDS2328358 1644 - 0.532847
yrbC SF3232 orf, conserved hypothetical proteinchromosome CDS3329437 636 - 0.52044